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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm


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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in ISO
ISS
IEA
RGD
UniProt
TreeGrafter
PMID:16166080 PMID:18321474 GO_REF:0000024 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chrNW_004624801:6,329,090...6,333,290
Ensembl chrNW_004624801:6,331,505...6,333,599
JBrowse link
G Actb actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chrNW_004624740:6,915,445...7,003,299
Ensembl chrNW_004624740:6,922,879...7,003,658
JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chrNW_004624816:3,366,594...3,387,431
Ensembl chrNW_004624816:3,366,744...3,387,447
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004624730:69,941,963...69,959,266
Ensembl chrNW_004624730:69,941,001...69,957,012
JBrowse link
G Agrn agrin acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786
JBrowse link
G Agrp agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chrNW_004624746:18,826,206...18,827,453
Ensembl chrNW_004624746:18,826,545...18,827,299
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G Atf5 activating transcription factor 5 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chrNW_004624832:4,400,586...4,405,203
Ensembl chrNW_004624832:4,396,604...4,405,185
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:2445865 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chrNW_004624907:715,109...736,040
Ensembl chrNW_004624907:715,094...736,432
JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chrNW_004624748:2,112,574...2,183,994
Ensembl chrNW_004624748:2,113,094...2,205,856
JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO PMID:12397359
(MGI:5574300|PMID:19786558)
(PMID:28797635)
UniProt PMID:12397359 PMID:19786558 PMID:28797635 MGI:5574300 RGD:625726 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO PMID:12397359
(MGI:5574300|PMID:19786558)
UniProt PMID:12397359 PMID:19786558 MGI:5574300 RGD:625726 NCBI chrNW_004624752:13,000,238...13,004,777
Ensembl chrNW_004624752:13,000,525...13,003,079
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928563|PMID:11163178), (MGI:5923379|PMID:26945058)
(MGI:2179885|PMID:12024206), (MGI:2183702|PMID:12150932), (MGI:2667759|PMID:12843397), (MGI:2669067|PMID:12897057)
(MGI:3703208|PMID:17264215)
RGD
MGI
TreeGrafter
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... GO_REF:0000118 MGI:1928563 MGI:2179885 MGI:2183702 MGI:2667759 MGI:2669067 MGI:3703208 MGI:5923379 RGD:10043346 RGD:67927 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chrNW_004624802:10,191,679...10,194,585
Ensembl chrNW_004624802:10,191,014...10,194,275
JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chrNW_004624740:14,033,848...14,035,854 JBrowse link
G Clock clock circadian regulator involved_in
acts_upstream_of_or_within
ISO (MGI:5559671|PMID:14645221)
(MGI:2669067|PMID:12897057)
(MGI:2179885|PMID:12024206), (MGI:66027|PMID:8171325)
RGD
UniProt
MGI
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 PMID:14645221 MGI:2179885 MGI:2669067 MGI:5559671 MGI:66027 RGD:10401879 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5923379|PMID:26945058) MGI
Ensembl
PMID:26945058 GO_REF:0000107 MGI:5923379 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO (MGI:5567906|PMID:20852621) UniProt
RGD
PMID:20852621 PMID:21367864 MGI:5567906 RGD:7247438 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chrNW_004624805:6,890,484...6,992,469
Ensembl chrNW_004624805:6,923,557...6,992,450
JBrowse link
G Crx cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chrNW_004624832:6,103,530...6,108,129
Ensembl chrNW_004624832:6,104,229...6,108,146
JBrowse link
G Cry1 cryptochrome circadian regulator 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3703208|PMID:17264215)
(MGI:5464222|PMID:23133559)
(MGI:2667759|PMID:12843397)
(MGI:2179885|PMID:12024206)
(MGI:6294193|PMID:29561690)
MGI
UniProt
PMID:12024206 PMID:12843397 PMID:17264215 PMID:23133559 PMID:29561690 MGI:2179885 MGI:2667759 MGI:3703208 MGI:5464222 MGI:6294193 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO (MGI:4461092|PMID:20123978), (MGI:6294193|PMID:29561690)
(MGI:2179885|PMID:12024206)
(MGI:3703208|PMID:17264215)
RGD
UniProt
MGI
PMID:11804325 PMID:12024206 PMID:17264215 PMID:20123978 PMID:29561690 MGI:2179885 MGI:3703208 MGI:4461092 MGI:6294193 RGD:632584 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chrNW_004624740:3,674,727...3,732,058
Ensembl chrNW_004624740:3,674,609...3,732,676
JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156
JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075
JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chrNW_004624766:21,834,093...21,837,314
Ensembl chrNW_004624766:21,834,169...21,836,710
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chrNW_004624745:26,180,858...26,316,848
Ensembl chrNW_004624745:26,180,864...26,315,234
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004624802:11,906,279...11,925,530
Ensembl chrNW_004624802:11,905,271...11,925,707
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chrNW_004624793:780,057...788,105
Ensembl chrNW_004624793:780,059...788,095
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623
JBrowse link
G Gnrhr gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004624761:1,216,501...1,231,229
Ensembl chrNW_004624761:1,216,556...1,225,994
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (MGI:5568140|PMID:24736997) UniProt PMID:24736997 MGI:5568140 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025
JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004624794:12,206,278...12,220,679
Ensembl chrNW_004624794:12,206,252...12,218,173
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004624764:7,956,789...7,992,449
Ensembl chrNW_004624764:7,957,395...7,992,398
JBrowse link
G Homer1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chrNW_004624869:3,878,646...4,012,211
Ensembl chrNW_004624869:3,880,001...4,012,240
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chrNW_004624782:8,118,746...8,212,259
Ensembl chrNW_004624782:8,118,106...8,212,237
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624737:1,960,985...2,067,086
Ensembl chrNW_004624737:1,960,057...2,067,038
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004624741:897,038...898,249
Ensembl chrNW_004624741:896,932...898,343
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747) UniProt PMID:19217292 PMID:19740747 MGI:3838062 MGI:4420353 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004624764:8,175,841...8,177,444
Ensembl chrNW_004624764:8,175,372...8,177,451
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:3,071,132...3,075,870
Ensembl chrNW_004624730:3,071,141...3,075,882
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004624908:1,572,628...1,574,205
Ensembl chrNW_004624908:1,573,174...1,574,113
JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chrNW_004624732:2,684,719...3,150,749
Ensembl chrNW_004624732:2,684,948...3,148,951
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO (MGI:4438787|PMID:20070857) UniProt PMID:20070857 MGI:4438787 NCBI chrNW_004624763:19,582,019...19,592,447
Ensembl chrNW_004624763:19,581,730...19,587,730
JBrowse link
G Klf9 KLF transcription factor 9 involved_in ISO (PMID:22711835) UniProt PMID:22711835 NCBI chrNW_004624736:2,653,336...2,682,677
Ensembl chrNW_004624736:2,654,220...2,682,673
JBrowse link
G Lep leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5607511|PMID:24353284) UniProt PMID:24353284 MGI:5607511 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785
JBrowse link
G Lipc lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chrNW_004624781:13,342,469...13,468,120
Ensembl chrNW_004624781:13,342,357...13,455,055
JBrowse link
G LOC101721563 25-hydroxycholesterol 7-alpha-hydroxylase ISO RGD PMID:12759897 RGD:1298869 NCBI chrNW_004624744:26,791,829...26,999,584
Ensembl chrNW_004624744:26,792,890...26,991,425
JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004624749:17,596,381...17,603,804
Ensembl chrNW_004624749:17,596,381...17,603,867
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5527005|PMID:24209618) UniProt PMID:24209618 MGI:5527005 NCBI chrNW_004624825:7,513,481...7,527,716
Ensembl chrNW_004624825:7,513,481...7,527,695
JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chrNW_004624769:17,320,100...17,355,164
Ensembl chrNW_004624769:17,320,107...17,355,099
JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in ISO (MGI:5607511|PMID:24353284) UniProt PMID:24353284 MGI:5607511 NCBI chrNW_004624830:7,463,671...7,505,607
Ensembl chrNW_004624830:7,464,686...7,506,129
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISO (MGI:3843127|PMID:19299583) RGD
UniProt
PMID:19299583 PMID:26547053 MGI:3843127 RGD:13781893 NCBI chrNW_004624739:23,411,478...23,444,590
Ensembl chrNW_004624739:23,411,488...23,442,359
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in ISO (PMID:28985504) UniProt PMID:28985504 NCBI chrNW_004624860:1,703,972...1,729,185
Ensembl chrNW_004624860:1,703,244...1,728,779
JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624868:1,139,575...1,150,370
Ensembl chrNW_004624868:1,139,595...1,150,370
JBrowse link
G Ngf nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Noct nocturnin involved_in ISO (MGI:4837993|PMID:20685873), (MGI:5308514|PMID:22073225) UniProt PMID:20685873 PMID:22073225 MGI:4837993 MGI:5308514 NCBI chrNW_004624777:19,379,447...19,383,477 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624764:10,896,728...10,899,898
Ensembl chrNW_004624764:10,892,481...10,899,215
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2183702|PMID:12150932) RGD
Ensembl
MGI
PMID:12150932 PMID:24144766 GO_REF:0000107 MGI:2183702 RGD:10448984 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO (PMID:21628546) UniProt PMID:21628546 NCBI chrNW_004624745:3,389,486...3,469,599
Ensembl chrNW_004624745:3,392,572...3,468,576
JBrowse link
G Nrxn1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624885:1,989,027...2,005,474
Ensembl chrNW_004624885:1,989,138...2,005,577
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601
JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004624783:8,340,098...8,344,371
Ensembl chrNW_004624783:8,340,098...8,344,371
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chrNW_004624804:10,754,978...10,784,641
Ensembl chrNW_004624804:10,755,103...10,784,337
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO
IEA
RGD
UniProt
PMID:11122332 PMID:12176169 GO_REF:0000117 RGD:1299576 RGD:631234 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2667759|PMID:12843397) RGD
UniProt
MGI
PMID:9765215 PMID:9878515 PMID:12843397 GO_REF:0000117 MGI:2667759 RGD:10043346 RGD:61691 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Per3 period circadian regulator 3 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chrNW_004624792:8,448,245...8,680,845
Ensembl chrNW_004624792:8,448,013...8,681,053
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chrNW_004624754:4,679,451...4,681,627
Ensembl chrNW_004624754:4,679,521...4,681,627
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chrNW_004624757:9,799,777...9,904,825
Ensembl chrNW_004624757:9,798,808...9,906,517
JBrowse link
G Prl prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chrNW_004624756:4,585,542...4,593,285 JBrowse link
G Prok2 prokineticin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206) MGI
Ensembl
PMID:12024206 GO_REF:0000107 MGI:2179885 NCBI chrNW_004624773:6,310,025...6,323,245
Ensembl chrNW_004624773:6,307,653...6,323,208
JBrowse link
G Prokr2 prokineticin receptor 2 acts_upstream_of_or_within ISO (MGI:2179885|PMID:12024206) MGI PMID:12024206 MGI:2179885 NCBI chrNW_004624741:6,270,098...6,281,147
Ensembl chrNW_004624741:6,270,002...6,281,182
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:5582866|PMID:23723244) UniProt PMID:23723244 MGI:5582866 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Rora RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorb RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chrNW_004624811:2,076,474...2,281,933
Ensembl chrNW_004624811:2,076,437...2,277,040
JBrowse link
G Rorc RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chrNW_004624742:27,302,222...27,319,549
Ensembl chrNW_004624742:27,302,453...27,319,203
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chrNW_004624731:2,254,445...2,356,174
Ensembl chrNW_004624731:2,254,445...2,355,738
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chrNW_004624731:2,065,228...2,203,215 JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chrNW_004624787:3,995,319...4,148,230
Ensembl chrNW_004624787:3,997,887...4,085,449
JBrowse link
G Setx senataxin acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chrNW_004624760:3,932,213...4,007,290
Ensembl chrNW_004624760:3,955,494...4,007,610
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004624749:17,486,483...17,495,822
Ensembl chrNW_004624749:17,486,518...17,493,846
JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004624758:17,742,439...17,744,664
Ensembl chrNW_004624758:17,742,415...17,744,655
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3807721|PMID:18662546) UniProt PMID:18662546 MGI:3807721 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chrNW_004624795:739,821...752,773
Ensembl chrNW_004624795:743,646...752,103
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chrNW_004624786:2,673,285...2,711,432
Ensembl chrNW_004624786:2,672,552...2,710,914
JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chrNW_004624751:254,373...290,218
Ensembl chrNW_004624751:256,305...291,178
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (MGI:5574300|PMID:19786558) UniProt PMID:19786558 MGI:5574300 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004624893:499,222...512,341
Ensembl chrNW_004624893:498,973...512,443
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004624805:594,986...619,115
Ensembl chrNW_004624805:597,406...618,969
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (MGI:5511073|PMID:24043798) UniProt PMID:24043798 MGI:5511073 NCBI chrNW_004624764:19,194,469...19,236,518
Ensembl chrNW_004624764:19,194,496...19,238,123
JBrowse link
G Timeless timeless circadian regulator involved_in ISO (MGI:1344065|PMID:10231394), (MGI:5578016|PMID:23418588) UniProt PMID:10231394 PMID:23418588 MGI:1344065 MGI:5578016 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chrNW_004624766:9,629,951...9,687,772
Ensembl chrNW_004624766:9,629,849...9,668,393
JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chrNW_004624750:25,702,597...25,801,938
Ensembl chrNW_004624750:25,702,630...25,801,618
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chrNW_004624770:11,138,673...11,149,600
Ensembl chrNW_004624770:11,138,652...11,149,600
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5436392|PMID:22678064) MGI
TreeGrafter
PMID:22678064 GO_REF:0000118 MGI:5436392 NCBI chrNW_004624754:19,562,532...20,014,323
Ensembl chrNW_004624754:19,616,547...20,011,989
JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in ISO (MGI:5825412|PMID:27142930) UniProt PMID:27142930 MGI:5825412 NCBI chrNW_004624818:3,109,457...3,123,819
Ensembl chrNW_004624818:3,109,407...3,123,912
JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in ISO (MGI:5790765|PMID:26882873) UniProt PMID:26882873 MGI:5790765 NCBI chrNW_004624804:7,119,104...7,249,561
Ensembl chrNW_004624804:7,119,323...7,248,778
JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (MGI:7572085|PMID:38172607) MGI PMID:38172607 MGI:7572085 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:4949943|PMID:21525287) MGI PMID:21525287 MGI:4949943 NCBI chrNW_004624738:26,379,172...26,391,669
Ensembl chrNW_004624738:26,380,088...26,394,252
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004624754:7,612,817...8,156,038
Ensembl chrNW_004624754:7,612,881...8,156,681
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:4820700|PMID:20106950) UniProt PMID:20106950 MGI:4820700 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chrNW_004624752:13,000,238...13,004,777
Ensembl chrNW_004624752:13,000,525...13,003,079
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645
JBrowse link
G Cartpt CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chrNW_004624905:751,032...753,012
Ensembl chrNW_004624905:751,223...752,845
JBrowse link
G Cavin3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,836,671...7,838,590
Ensembl chrNW_004624817:7,836,557...7,838,718
JBrowse link
G Ciart circadian associated repressor of transcription involved_in IEA TreeGrafter
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692
JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:21980503), (PMID:28985504)
(PMID:10864977), (PMID:23229515), (PMID:24005054)
(MGI:2683983|PMID:14672706), (MGI:3794495|PMID:18316400), (MGI:3843127|PMID:19299583), (MGI:3843754|PMID:19141540), (MGI:4837055|PMID:20430893), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5442460|PMID:22653727), (MGI:5503234|PMID:23785138), (MGI:6282958|PMID:30012868)
UniProt PMID:10864977 PMID:14672706 PMID:15147242 PMID:18316400 PMID:19141540 More... MGI:2683983 MGI:3794495 MGI:3843127 MGI:3843754 MGI:4837055 MGI:5292598 MGI:5297789 MGI:5442460 MGI:5503234 MGI:6282958 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chrNW_004624805:6,890,484...6,992,469
Ensembl chrNW_004624805:6,923,557...6,992,450
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5302136|PMID:22170608)
(MGI:3843127|PMID:19299583), (MGI:5464222|PMID:23133559), (MGI:5490394|PMID:23616524), (MGI:5545849|PMID:24385426)
UniProt PMID:19299583 PMID:22170608 PMID:23133559 PMID:23616524 PMID:24385426 MGI:3843127 MGI:5302136 MGI:5464222 MGI:5490394 MGI:5545849 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chrNW_004624801:11,031,102...11,074,100
Ensembl chrNW_004624801:11,032,021...11,058,551
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (MGI:3625767|PMID:16606840) MGI PMID:16606840 MGI:3625767 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO (MGI:3611612|PMID:15878801) MGI PMID:15878801 MGI:3611612 NCBI chrNW_004624731:34,318,733...34,369,111
Ensembl chrNW_004624731:34,319,130...34,363,184
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:6219065|PMID:26471974), (MGI:6258624|PMID:29138967) UniProt PMID:26471974 PMID:29138967 MGI:6219065 MGI:6258624 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 involved_in ISO (MGI:5495336|PMID:23395176) UniProt PMID:23395176 MGI:5495336 NCBI chrNW_004624762:3,943,074...4,016,090
Ensembl chrNW_004624762:3,942,972...4,010,498
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592
JBrowse link
G Hdac3 histone deacetylase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821398|PMID:19037247) MGI
Ensembl
PMID:19037247 GO_REF:0000107 MGI:3821398 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809
JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:3794926|PMID:18332112) UniProt PMID:18332112 MGI:3794926 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (MGI:4458969|PMID:20534529)
(PMID:20534529)
UniProt PMID:20534529 MGI:4458969 NCBI chrNW_004624909:745,141...891,421
Ensembl chrNW_004624909:745,651...859,233
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:897,038...898,249
Ensembl chrNW_004624741:896,932...898,343
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:8,175,841...8,177,444
Ensembl chrNW_004624764:8,175,372...8,177,451
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004624767:19,247,009...19,365,520
Ensembl chrNW_004624767:19,248,430...19,364,793
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (MGI:5288521|PMID:21960634) UniProt PMID:21960634 MGI:5288521 NCBI chrNW_004624735:8,473,778...8,631,964
Ensembl chrNW_004624735:8,530,016...8,631,954
Ensembl chrNW_004624735:8,530,016...8,631,954
JBrowse link
G Kdm8 lysine demethylase 8 involved_in ISO (MGI:6270295|PMID:30500822) UniProt PMID:30500822 MGI:6270295 NCBI chrNW_004624782:11,884,847...11,903,944
Ensembl chrNW_004624782:11,884,631...11,903,947
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (MGI:5607228|PMID:21113167) UniProt PMID:21113167 MGI:5607228 NCBI chrNW_004624784:13,824,507...13,912,672
Ensembl chrNW_004624784:13,824,541...13,908,077
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5607511|PMID:24353284) UniProt PMID:24353284 MGI:5607511 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624981:53,502...229,889
Ensembl chrNW_004624981:222,344...233,078
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISO (MGI:3821632|PMID:19036988) UniProt PMID:19036988 MGI:3821632 NCBI chrNW_004624790:284,586...287,268
Ensembl chrNW_004624790:285,965...286,936
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISO (MGI:5009503|PMID:19129230) UniProt PMID:19129230 MGI:5009503 NCBI chrNW_004624786:7,103,811...7,118,569 JBrowse link
G Mycbp2 MYC binding protein 2 involved_in ISO (PMID:20534529)
(MGI:4458969|PMID:20534529)
UniProt PMID:20534529 MGI:4458969 NCBI chrNW_004624751:23,048,373...23,355,510
Ensembl chrNW_004624751:23,048,404...23,355,510
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624739:23,411,478...23,444,590
Ensembl chrNW_004624739:23,411,488...23,442,359
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:3821398 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Noct nocturnin involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chrNW_004624777:19,379,447...19,383,477 JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:10,896,728...10,899,898
Ensembl chrNW_004624764:10,892,481...10,899,215
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:3,389,486...3,469,599
Ensembl chrNW_004624745:3,392,572...3,468,576
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:21,702,453...21,716,805
Ensembl chrNW_004624743:21,701,158...21,717,123
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (MGI:5495336|PMID:23395176) UniProt PMID:23395176 MGI:5495336 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:3715412|PMID:17476214) UniProt PMID:17476214 MGI:3715412 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:5294280 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chrNW_004624757:9,799,777...9,904,825
Ensembl chrNW_004624757:9,798,808...9,906,517
JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chrNW_004624820:9,599,867...9,608,578
Ensembl chrNW_004624820:9,599,734...9,608,703
JBrowse link
G Rai1 retinoic acid induced 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:3,624,436...3,749,276
Ensembl chrNW_004624849:3,625,882...3,640,671
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (MGI:5574290|PMID:22894897) UniProt PMID:22894897 MGI:5574290 NCBI chrNW_004624907:1,806,784...1,829,686
Ensembl chrNW_004624907:1,806,874...1,829,417
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) UniProt PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3807721|PMID:18662546), (MGI:3843127|PMID:19299583)
(PMID:18662546)
UniProt PMID:18662546 PMID:19299583 MGI:3807721 MGI:3843127 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:5603468|PMID:25083875) UniProt PMID:25083875 MGI:5603468 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chrNW_004624919:1,668,712...1,756,624
Ensembl chrNW_004624919:1,668,440...1,756,629
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chrNW_004624746:15,094,890...15,330,653
Ensembl chrNW_004624746:15,098,960...15,254,127
JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (MGI:6364050|PMID:31560728) MGI PMID:31560728 MGI:6364050 NCBI chrNW_004624795:3,242,607...3,252,997 JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chrNW_004624842:5,053,336...5,071,902
Ensembl chrNW_004624842:5,053,280...5,072,679
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (MGI:6316762|PMID:30498428) MGI PMID:30498428 MGI:6316762 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624850:2,698,806...2,792,194
Ensembl chrNW_004624850:2,699,140...2,795,350
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO (MGI:5436392|PMID:22678064) MGI PMID:22678064 MGI:5436392 NCBI chrNW_004624754:19,562,532...20,014,323
Ensembl chrNW_004624754:19,616,547...20,011,989
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:2445919 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in ISO (MGI:6258624|PMID:29138967) UniProt PMID:29138967 MGI:6258624 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in ISO (MGI:4413614|PMID:19940926) BHF-UCL PMID:19940926 MGI:4413614 NCBI chrNW_004624792:8,029,383...8,087,824
Ensembl chrNW_004624792:8,029,364...8,084,424
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:2445865 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004624926:1,326,851...1,335,477
Ensembl chrNW_004624926:1,326,866...1,330,805
JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:3838062 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within ISO (MGI:4420841|PMID:20080691) MGI PMID:20080691 MGI:4420841 NCBI chrNW_004624792:8,448,245...8,680,845
Ensembl chrNW_004624792:8,448,013...8,681,053
JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (MGI:5440343|PMID:22920256) MGI PMID:22920256 MGI:5440343 NCBI chrNW_004624730:14,278,017...14,279,929
Ensembl chrNW_004624730:14,278,020...14,279,496
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chrNW_004624908:1,814,079...1,868,717
Ensembl chrNW_004624908:1,814,148...1,866,915
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Fbxl21 Putative F-box/LRR-repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chrNW_004624733:11,174,526...11,186,938 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524) UniProt PMID:23452855 PMID:23452856 PMID:23616524 MGI:5470183 MGI:5487698 MGI:5490394 NCBI chrNW_004624751:23,374,622...23,391,535
Ensembl chrNW_004624751:23,374,702...23,398,727
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chrNW_004624908:673,615...680,443
Ensembl chrNW_004624908:672,916...680,443
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chrNW_004624841:472,053...483,623
Ensembl chrNW_004624841:474,035...482,475
JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) UniProt PMID:26392540 PMID:30240620 PMID:31607531 MGI:5699646 MGI:6376341 MGI:6378274 NCBI chrNW_004624754:13,307,738...13,332,287
Ensembl chrNW_004624754:13,307,738...13,332,287
JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (MGI:6378274|PMID:30240620) UniProt PMID:30240620 MGI:6378274 NCBI chrNW_004624755:26,372,040...26,413,464
Ensembl chrNW_004624755:26,372,072...26,413,381
JBrowse link
G Per1 period circadian regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Sik1 salt inducible kinase 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chrNW_004624745:27,529,037...27,539,253
Ensembl chrNW_004624745:27,528,929...27,539,552
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (MGI:5642309|PMID:26131556) MGI PMID:26131556 MGI:5642309 NCBI chrNW_004624795:11,447,941...11,617,312 JBrowse link
G Ciart circadian associated repressor of transcription involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:6258624|PMID:29138967) UniProt PMID:29138967 MGI:6258624 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:15,349,416...15,892,011
Ensembl chrNW_004624783:15,351,870...15,891,057
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chrNW_004624754:10,152,635...10,885,239
Ensembl chrNW_004624754:10,153,809...10,885,079
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISO (MGI:3821632|PMID:19036988) UniProt PMID:19036988 MGI:3821632 NCBI chrNW_004624790:284,586...287,268
Ensembl chrNW_004624790:285,965...286,936
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (MGI:3769195|PMID:17712420) MGI PMID:17712420 MGI:3769195 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Nms neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chrNW_004624749:5,294,551...5,342,904
Ensembl chrNW_004624749:5,331,095...5,342,894
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,729,762...14,755,982
Ensembl chrNW_004624784:14,729,770...14,754,991
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK interacting pacemaker involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624734:24,767,952...24,787,781
Ensembl chrNW_004624734:24,766,660...24,782,103
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:4410413|PMID:19605937)
(MGI:5532917|PMID:17310242)
UniProt PMID:17310242 PMID:19605937 MGI:4410413 MGI:5532917 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) UniProt PMID:25936801 NCBI chrNW_004624883:2,976,237...2,980,477 JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:17,834,268...17,911,886
Ensembl chrNW_004624758:17,834,191...17,902,575
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004624807:7,674,164...7,705,736
Ensembl chrNW_004624807:7,674,927...7,705,051
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (MGI:4844267|PMID:18782782) UniProt PMID:18782782 MGI:4844267 NCBI chrNW_004624831:868,417...1,065,591
Ensembl chrNW_004624831:868,563...1,060,248
JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:12738229), (PMID:23229515)
(MGI:5442460|PMID:22653727)
ComplexPortal PMID:12738229 PMID:22653727 PMID:23229515 MGI:5442460 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (MGI:4844267|PMID:18782782) UniProt PMID:18782782 MGI:4844267 NCBI chrNW_004624733:17,985,546...18,121,398 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (MGI:6331398|PMID:31294688) UniProt PMID:31294688 MGI:6331398 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chrNW_004624735:37,676,400...37,690,449 JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (MGI:5574291|PMID:22356123) UniProt PMID:22356123 MGI:5574291 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004624772:19,478,403...19,501,184
Ensembl chrNW_004624772:19,477,093...19,501,169
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:24043798) UniProt PMID:24043798 NCBI chrNW_004624764:19,194,469...19,236,518
Ensembl chrNW_004624764:19,194,496...19,238,123
JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chrNW_004624735:34,105,237...34,123,479
Ensembl chrNW_004624735:34,104,537...34,123,624
JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chrNW_004624783:200,935...214,453
Ensembl chrNW_004624783:200,940...214,373
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chrNW_004624735:37,676,400...37,690,449 JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chrNW_004624848:3,049,009...3,054,548
Ensembl chrNW_004624848:3,048,413...3,054,495
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Pmch pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chrNW_004624750:6,109,542...6,110,834
Ensembl chrNW_004624750:6,109,284...6,111,547
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004624747:9,846,254...9,860,938
Ensembl chrNW_004624747:9,851,153...9,860,094
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chrNW_004624841:472,053...483,623
Ensembl chrNW_004624841:474,035...482,475
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5492265|PMID:23716671) UniProt PMID:23716671 MGI:5492265 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nps neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chrNW_004624737:19,447,495...19,451,005 JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004624740:6,915,445...7,003,299
Ensembl chrNW_004624740:6,922,879...7,003,658
JBrowse link
G Atg7 autophagy related 7 involved_in ISO (MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:6208175 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:6282958 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) UniProt PMID:15917222 NCBI chrNW_004624831:868,417...1,065,591
Ensembl chrNW_004624831:868,563...1,060,248
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (MGI:5495335|PMID:23398316) UniProt PMID:23398316 MGI:5495335 NCBI chrNW_004624758:18,106,621...18,120,910
Ensembl chrNW_004624758:18,106,606...18,120,907
JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in ISO (PMID:27238018) UniProt PMID:27238018 NCBI chrNW_004624791:2,891,239...2,915,001 JBrowse link
G Clock clock circadian regulator involved_in ISO (MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:6282958 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:1334825|PMID:10217146), (MGI:4366197|PMID:19833968), (MGI:4947326|PMID:21236481), (MGI:5490394|PMID:23616524), (MGI:5908518|PMID:26431207)
(MGI:5567898|PMID:23575670)
UniProt PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... MGI:1334825 MGI:4366197 MGI:4947326 MGI:5490394 MGI:5567898 MGI:5908518 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:5567898|PMID:23575670)
(MGI:1334825|PMID:10217146), (MGI:5490394|PMID:23616524)
UniProt PMID:10217146 PMID:23575670 PMID:23616524 MGI:1334825 MGI:5490394 MGI:5567898 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071
JBrowse link
G Csnk1d casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:11,031,102...11,074,100
Ensembl chrNW_004624801:11,032,021...11,058,551
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (MGI:5908518|PMID:26431207) UniProt PMID:26431207 MGI:5908518 NCBI chrNW_004624926:871,003...893,902
Ensembl chrNW_004624926:871,000...897,777
JBrowse link
G Drd4 dopamine receptor D4 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004624766:21,834,093...21,837,314
Ensembl chrNW_004624766:21,834,169...21,836,710
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16717091)
(MGI:3694308|PMID:16717091)
UniProt PMID:16717091 MGI:3694308 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (MGI:3710694|PMID:17463252), (MGI:3715674|PMID:17462724), (MGI:5490394|PMID:23616524)
(PMID:17463251)
UniProt PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 MGI:3710694 MGI:3715674 MGI:5490394 NCBI chrNW_004624751:23,374,622...23,391,535
Ensembl chrNW_004624751:23,374,702...23,398,727
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:27238018)
(MGI:6282935|PMID:27238018)
UniProt PMID:27238018 MGI:6282935 NCBI chrNW_004624858:3,778,842...3,974,351
Ensembl chrNW_004624858:3,775,795...3,873,336
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:845,970...864,080
Ensembl chrNW_004624774:845,358...863,809
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004624767:19,247,009...19,365,520
Ensembl chrNW_004624767:19,248,430...19,364,793
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chrNW_004624763:19,582,019...19,592,447
Ensembl chrNW_004624763:19,581,730...19,587,730
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624981:53,502...229,889
Ensembl chrNW_004624981:222,344...233,078
JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (MGI:5607219|PMID:22208286) UniProt PMID:22208286 MGI:5607219 NCBI chrNW_004624768:613,396...618,222
Ensembl chrNW_004624768:613,243...618,303
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004624733:42,998,948...43,048,392
Ensembl chrNW_004624733:42,999,339...43,048,285
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Noct nocturnin involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chrNW_004624777:19,379,447...19,383,477 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Opn4 opsin 4 involved_in ISO (MGI:2667269|PMID:12808468) UniProt PMID:12808468 MGI:2667269 NCBI chrNW_004624841:472,053...483,623
Ensembl chrNW_004624841:474,035...482,475
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250) UniProt PMID:11395012 PMID:19917250 MGI:1935010 MGI:4410390 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:3715412|PMID:17476214) UniProt PMID:17476214 MGI:3715412 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5086036|PMID:21712997)
(MGI:5294280|PMID:21930935)
(PMID:21712997)
UniProt PMID:21712997 PMID:21930935 MGI:5086036 MGI:5294280 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4366197|PMID:19833968) UniProt PMID:19833968 MGI:4366197 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (MGI:4366197|PMID:19833968) UniProt PMID:19833968 MGI:4366197 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142
JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (MGI:5467682|PMID:23185022) UniProt PMID:23185022 MGI:5467682 NCBI chrNW_004624832:2,548,286...2,566,365
Ensembl chrNW_004624832:2,547,535...2,566,402
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:5554971|PMID:24158435) UniProt PMID:24158435 MGI:5554971 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:23723244) UniProt PMID:23723244 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Pspc1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624776:17,906,700...17,978,885
Ensembl chrNW_004624776:17,906,063...17,978,098
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836)
(MGI:5567901|PMID:23172836)
UniProt PMID:23172836 MGI:5567901 NCBI chrNW_004624865:4,461,200...4,591,309
Ensembl chrNW_004624865:4,461,215...4,588,836
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:5567901|PMID:23172836) UniProt PMID:23172836 MGI:5567901 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Rorb RAR related orphan receptor B involved_in ISO (MGI:3712731|PMID:17303680) UniProt PMID:17303680 MGI:3712731 NCBI chrNW_004624811:2,076,474...2,281,933
Ensembl chrNW_004624811:2,076,437...2,277,040
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISO (PMID:26392558)
(MGI:6241928|PMID:26392558)
UniProt PMID:26392558 MGI:6241928 NCBI chrNW_004624730:28,159,096...28,178,832
Ensembl chrNW_004624730:28,158,750...28,178,810
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:6443593|PMID:30782483) UniProt PMID:30782483 MGI:6443593 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:17,692,124...17,774,321
Ensembl chrNW_004624730:17,692,959...17,774,497
JBrowse link
G Srrd SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:6282940 NCBI chrNW_004624747:3,033,705...3,041,667
Ensembl chrNW_004624747:3,033,745...3,041,090
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:6253084 NCBI chrNW_004624818:1,759,496...1,789,806
Ensembl chrNW_004624818:1,759,497...1,789,813
JBrowse link
G Timeless timeless circadian regulator involved_in ISO (MGI:5578016|PMID:23418588)
(PMID:23418588)
UniProt PMID:23418588 MGI:5578016 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:27123980)
(MGI:6253084|PMID:27123980)
UniProt PMID:27123980 MGI:6253084 NCBI chrNW_004624824:6,277,111...6,338,051
Ensembl chrNW_004624824:6,276,354...6,338,227
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
G Il6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO (MGI:3770734|PMID:17925011) UniProt PMID:17925011 MGI:3770734 NCBI chrNW_004624772:6,298,113...6,311,614
Ensembl chrNW_004624772:6,305,550...6,309,906
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISO (MGI:6368107|PMID:25083013)
(PMID:25083013)
UniProt PMID:25083013 MGI:6368107 NCBI chrNW_004624737:32,536,096...32,563,721
Ensembl chrNW_004624737:32,541,598...32,563,424
JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chrNW_004624733:40,039,127...40,041,294
Ensembl chrNW_004624733:40,039,414...40,041,294
JBrowse link
G Drd3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chrNW_004624731:34,318,733...34,369,111
Ensembl chrNW_004624731:34,319,130...34,363,184
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (MGI:6706222|PMID:32893934) UniProt PMID:32893934 MGI:6706222 NCBI chrNW_004624730:58,679,945...58,743,688
Ensembl chrNW_004624730:58,680,030...58,743,229
JBrowse link
G Nmu neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chrNW_004624761:13,823,752...13,850,756
Ensembl chrNW_004624761:13,824,144...13,848,219
JBrowse link
G Per3 period circadian regulator 3 involved_in ISO (MGI:5300112|PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
UniProt PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... MGI:5300112 NCBI chrNW_004624818:3,959,639...4,007,739
Ensembl chrNW_004624818:3,967,333...4,007,739
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chrNW_004624832:7,220,739...7,225,146
Ensembl chrNW_004624832:7,221,064...7,224,615
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISO (MGI:3687807|PMID:10781097) UniProt PMID:10781097 MGI:3687807 NCBI chrNW_004624760:920,292...923,174
Ensembl chrNW_004624760:920,877...923,283
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chrNW_004624850:2,698,806...2,792,194
Ensembl chrNW_004624850:2,699,140...2,795,350
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624742:25,177,340...25,356,911 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chrNW_004624741:29,713,937...29,720,617
Ensembl chrNW_004624741:29,714,477...29,720,716
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chrNW_004624746:15,094,890...15,330,653
Ensembl chrNW_004624746:15,098,960...15,254,127
JBrowse link

Term paths to the root