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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm



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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AANAT aralkylamine N-acetyltransferase involved_in ISO
IBA
IEA
IMP
(PMID:12736803) RGD
GO_Central
TreeGrafter
Ensembl
UniProt
PMID:12736803 PMID:16166080 PMID:18321474 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chr17:76,453,351...76,470,117
Ensembl chr17:76,453,351...76,470,117
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chr 7:87,503,017...87,713,295
Ensembl chr 7:87,503,017...87,713,323
JBrowse link
G ACTB actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902
JBrowse link
G ADCY1 adenylate cyclase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:8855334 GO_REF:0000107 RGD:1625750 NCBI chr 7:45,574,140...45,723,116
Ensembl chr 7:45,574,140...45,723,116
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chr12:48,766,194...48,789,974
Ensembl chr12:48,766,194...48,789,089
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in ISO
IEA
RGD
Ensembl
PMID:21164040 GO_REF:0000107 RGD:5128545 NCBI chr 3:186,842,710...186,858,463
Ensembl chr 3:186,842,704...186,858,463
JBrowse link
G AGRN agrin acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chr 1:1,020,120...1,056,116
Ensembl chr 1:1,020,120...1,056,118
JBrowse link
G AGRP agouti related neuropeptide involved_in ISO
IEA
RGD
Ensembl
PMID:21060311 GO_REF:0000107 RGD:8693680 NCBI chr16:67,482,571...67,483,547
Ensembl chr16:67,482,571...67,483,547
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chr17:4,710,632...4,721,497
Ensembl chr17:4,710,596...4,721,499
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA
IDA
(PMID:28985504) Ensembl
UniProt
PMID:28985504 GO_REF:0000107 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683
JBrowse link
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:49,928,906...49,933,935
Ensembl chr19:49,928,702...49,933,935
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445865|PMID:12451142) MGI
Ensembl
PMID:12451142 GO_REF:0000107 MGI:2445865 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113
JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chr19:41,966,582...41,994,230
Ensembl chr19:41,966,582...41,997,497
JBrowse link
G ATP7B ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chr13:51,932,669...52,012,132
Ensembl chr13:51,930,436...52,012,125
JBrowse link
G BDNF brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr11:27,654,893...27,722,030
Ensembl chr11:27,654,893...27,722,058
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA
IDA
(PMID:28797635) Ensembl
UniProt
PMID:28797635 GO_REF:0000107 NCBI chr 3:4,979,437...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,120,030...26,125,037
Ensembl chr12:26,120,030...26,125,037
JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
TAS
(MGI:1928563|PMID:11163178), (MGI:5923379|PMID:26945058)
(PMID:9616112)
(MGI:2179885|PMID:12024206), (MGI:2183702|PMID:12150932), (MGI:2667759|PMID:12843397), (MGI:2669067|PMID:12897057)
(MGI:3703208|PMID:17264215)
RGD
GO_Central
TreeGrafter
MGI
PINC
PMID:9616112 PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 More... GO_REF:0000033 GO_REF:0000118 MGI:1928563 MGI:2179885 MGI:2183702 MGI:2667759 MGI:2669067 MGI:3703208 MGI:5923379 RGD:10043346 RGD:67927 NCBI chr11:13,276,652...13,387,266
Ensembl chr11:13,276,652...13,387,266
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 acts_upstream_of_or_within IDA (PMID:10864977) MGI PMID:10864977 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CLDN4 claudin 4 involved_in ISO
IEA
RGD
Ensembl
PMID:20091493 GO_REF:0000107 RGD:8693638 NCBI chr 7:73,830,996...73,832,690
Ensembl chr 7:73,799,542...73,832,690
JBrowse link
G CLOCK clock circadian regulator involved_in
acts_upstream_of_or_within
ISO
IEA
TAS
(PMID:10198158)
(MGI:2179885|PMID:12024206), (MGI:66027|PMID:8171325)
(MGI:2669067|PMID:12897057)
RGD
Ensembl
PINC
MGI
PMID:8171325 PMID:10198158 PMID:10471199 PMID:12024206 PMID:12897057 GO_REF:0000107 MGI:2179885 MGI:2669067 MGI:66027 RGD:10401879 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5923379|PMID:26945058) MGI
Ensembl
PMID:26945058 GO_REF:0000107 MGI:5923379 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050
JBrowse link
G CREB1 cAMP responsive element binding protein 1 involved_in ISO
ISS
IEA
RGD
UniProt
Ensembl
PMID:21367864 GO_REF:0000024 GO_REF:0000107 RGD:7247438 NCBI chr 2:207,529,962...207,605,988
Ensembl chr 2:207,529,737...207,605,988
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr10:35,126,846...35,212,958
Ensembl chr10:35,126,791...35,212,958
JBrowse link
G CRX cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chr19:47,821,937...47,843,324
Ensembl chr19:47,819,779...47,843,330
JBrowse link
G CRY1 cryptochrome circadian regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:2179885|PMID:12024206)
(MGI:2667759|PMID:12843397)
(MGI:3703208|PMID:17264215)
MGI
Ensembl
UniProt
PMID:12024206 PMID:12843397 PMID:17264215 GO_REF:0000024 GO_REF:0000107 MGI:2179885 MGI:2667759 MGI:3703208 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO
IEA
ISS
(MGI:2179885|PMID:12024206)
(MGI:3703208|PMID:17264215)
RGD
Ensembl
UniProt
MGI
PMID:11804325 PMID:12024206 PMID:17264215 GO_REF:0000024 GO_REF:0000107 MGI:2179885 MGI:3703208 RGD:632584 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO RGD PMID:12759897 RGD:1298869 NCBI chr 8:64,586,575...64,798,737
Ensembl chr 8:64,587,763...64,798,737
JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chr 7:50,458,442...50,565,405
Ensembl chr 7:50,458,436...50,565,405
JBrowse link
G DDX5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199
JBrowse link
G DHX9 DExH-box helicase 9 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chr11:637,269...640,706
Ensembl chr11:637,269...640,706
JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr21:37,365,573...37,526,358
Ensembl chr21:37,365,573...37,526,358
JBrowse link
G EGFR epidermal growth factor receptor involved_in ISO
IEA
RGD
Ensembl
PMID:12454858 GO_REF:0000107 RGD:2289959 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chr 5:138,465,479...138,469,303
Ensembl chr 5:138,465,479...138,469,303
JBrowse link
G EGR3 early growth response 3 involved_in TAS (PMID:9488654) PINC PMID:9488654 NCBI chr 8:22,687,659...22,693,480
Ensembl chr 8:22,687,659...22,693,480
JBrowse link
G EP300 E1A binding protein p300 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,592...41,180,077
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
G F7 coagulation factor VII involved_in ISO
IEA
RGD
Ensembl
PMID:2607889 GO_REF:0000107 RGD:2312319 NCBI chr13:113,105,788...113,120,685
Ensembl chr13:113,105,788...113,120,685
JBrowse link
G FAS Fas cell surface death receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chr 2:28,392,858...28,417,317
Ensembl chr 2:28,392,448...28,417,317
JBrowse link
G GNRHR gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 4:67,737,118...67,754,388
Ensembl chr 4:67,737,118...67,754,388
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:32,292,083...32,333,626
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HEBP1 heme binding protein 1 involved_in TAS (PMID:10640688) PINC PMID:10640688 NCBI chr12:12,974,870...13,000,265
Ensembl chr12:12,974,870...13,000,265
JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chr19:38,836,370...38,852,347
Ensembl chr19:38,836,370...38,852,347
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:23,304,688...23,344,284
Ensembl chr 1:23,303,771...23,344,336
JBrowse link
G HOMER1 homer scaffold protein 1 involved_in ISO
IEA
RGD
Ensembl
PMID:15308308 GO_REF:0000107 RGD:2316907 NCBI chr 5:79,372,636...79,514,134
Ensembl chr 5:79,372,636...79,514,134
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chr16:22,814,162...22,916,338
Ensembl chr16:22,814,162...22,916,338
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 involved_in TAS
IEA
(PMID:8398139) PINC
InterPro
PMID:8398139 GO_REF:0000002 NCBI chr10:90,740,823...90,858,039
Ensembl chr10:90,740,823...90,858,039
JBrowse link
G ID1 inhibitor of DNA binding 1 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr20:31,605,289...31,606,510
Ensembl chr20:31,605,283...31,606,515
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:23,557,926...23,559,501
Ensembl chr 1:23,557,926...23,559,501
JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:19,837,370...19,842,197
Ensembl chr 6:19,837,370...19,842,197
JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IDA (PMID:28985504) UniProt PMID:28985504 NCBI chr 3:49,024,325...49,029,398
Ensembl chr 3:49,024,325...49,029,447
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr19:18,279,694...18,281,622
Ensembl chr19:18,279,694...18,281,622
JBrowse link
G KCNH7 potassium voltage-gated channel subfamily H member 7 involved_in ISO
IEA
RGD
Ensembl
PMID:17322986 GO_REF:0000107 RGD:2314391 NCBI chr 2:162,371,407...162,838,767
Ensembl chr 2:162,371,407...162,838,767
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chr10:76,869,602...77,637,808
Ensembl chr10:76,869,601...77,638,369
JBrowse link
G KLF10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:102,648,784...102,655,725
Ensembl chr 8:102,648,784...102,655,725
JBrowse link
G KLF9 KLF transcription factor 9 involved_in IEP (PMID:22711835) UniProt PMID:22711835 NCBI chr 9:70,384,604...70,414,657
Ensembl chr 9:70,384,604...70,414,657
JBrowse link
G LEP leptin involved_in ISO
IEA
RGD
Ensembl
PMID:21164040 GO_REF:0000107 RGD:5128545 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790
JBrowse link
G LIPC lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr15:58,431,991...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr 2:85,539,168...85,545,281
Ensembl chr 2:85,539,168...85,545,281
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISS UniProt GO_REF:0000024 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342
JBrowse link
G MTNR1A melatonin receptor 1A involved_in ISO
TAS
(PMID:9645677) RGD
PINC
PMID:9645677 PMID:23895529 RGD:9686056 NCBI chr 4:186,533,655...186,555,567
Ensembl chr 4:186,526,792...186,555,567
JBrowse link
G MTTP microsomal triglyceride transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,564,081...99,623,997
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in ISO
IEA
RGD
Ensembl
PMID:26547053 GO_REF:0000107 RGD:13781893 NCBI chr 7:106,248,298...106,285,888
Ensembl chr 7:106,248,298...106,285,966
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:70,109,782...70,456,446
Ensembl chr 8:70,109,782...70,403,808
JBrowse link
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 involved_in IDA (PMID:28985504) UniProt PMID:28985504 NCBI chr12:4,649,114...4,694,317
Ensembl chr12:4,649,095...4,694,317
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated involved_in IEA
IBA
UniProt
TreeGrafter
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 9:91,409,045...91,483,497
Ensembl chr 9:91,409,045...91,423,832
JBrowse link
G NFILZ NFIL3 like basic leucine zipper involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr19:8,630,633...8,681,151
Ensembl chr19:8,630,633...8,681,151
JBrowse link
G NGF nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr 1:115,285,917...115,338,249
Ensembl chr 1:115,285,904...115,338,770
JBrowse link
G NGFR nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:49,495,293...49,515,008
Ensembl chr17:49,495,293...49,515,008
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G NONO non-POU domain containing octamer binding involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IDA
IBA
IEA
(PMID:28797635) UniProt
GO_Central
TreeGrafter
PMID:28797635 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:26,911,489...26,913,975
Ensembl chr 1:26,911,489...26,913,975
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2183702|PMID:12150932) RGD
Ensembl
MGI
PMID:12150932 PMID:24144766 GO_REF:0000107 MGI:2183702 RGD:10448984 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEP (PMID:21628546) UniProt PMID:21628546 NCBI chr21:14,961,235...15,065,936
Ensembl chr21:14,961,235...15,065,936
JBrowse link
G NRXN1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:156,815,750...156,881,850
Ensembl chr 1:156,815,636...156,881,850
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:84,668,522...85,027,054
Ensembl chr 9:84,668,375...85,095,751
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr15:87,859,751...88,256,739
Ensembl chr15:87,859,751...88,256,791
JBrowse link
G PAX4 paired box 4 involved_in ISO
IEA
RGD
Ensembl
PMID:19012751 GO_REF:0000107 RGD:2311636 NCBI chr 7:127,610,292...127,618,142
Ensembl chr 7:127,610,292...127,618,142
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chr15:43,746,438...43,773,278
Ensembl chr15:43,746,394...43,773,279
JBrowse link
G PER1 period circadian regulator 1 involved_in ISO
IEA
IEP
TAS
(PMID:14645221)
(PMID:9333243)
RGD
Ensembl
UniProt
PINC
PMID:9333243 PMID:11122332 PMID:12176169 PMID:14645221 GO_REF:0000107 RGD:1299576 RGD:631234 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO
TAS
IEA
(PMID:9427249)
(MGI:2667759|PMID:12843397)
RGD
PINC
Ensembl
MGI
PMID:9427249 PMID:9765215 PMID:9878515 PMID:12843397 GO_REF:0000107 MGI:2667759 RGD:10043346 RGD:61691 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PER3 period circadian regulator 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667759|PMID:12843397) MGI
Ensembl
PMID:12843397 GO_REF:0000107 MGI:2667759 NCBI chr 1:7,784,291...7,845,177
Ensembl chr 1:7,784,291...7,845,177
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chr18:62,715,541...62,980,433
Ensembl chr18:62,715,541...62,980,433
JBrowse link
G PRF1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chr10:70,597,348...70,602,741
Ensembl chr10:70,597,348...70,602,759
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chr 4:81,087,370...81,217,836
Ensembl chr 4:81,087,370...81,215,222
JBrowse link
G PRL prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chr 6:22,287,246...22,302,835
Ensembl chr 6:22,287,244...22,302,826
JBrowse link
G PROK2 prokineticin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206) MGI
Ensembl
PMID:12024206 GO_REF:0000107 MGI:2179885 NCBI chr 3:71,771,655...71,785,148
Ensembl chr 3:71,771,655...71,785,206
JBrowse link
G PROKR1 prokineticin receptor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:68,643,579...68,658,251
Ensembl chr 2:68,643,579...68,658,251
JBrowse link
G PROKR2 prokineticin receptor 2 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:2179885|PMID:12024206) MGI
GO_Central
Ensembl
PMID:12024206 GO_REF:0000033 GO_REF:0000107 MGI:2179885 NCBI chr20:5,299,218...5,316,954
Ensembl chr20:5,299,218...5,316,954
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,664,998...66,677,887
Ensembl chr11:66,664,998...66,677,887
JBrowse link
G RORA RAR related orphan receptor A involved_in ISO
IEA
RGD
Ensembl
PMID:15781226 GO_REF:0000107 RGD:2325957 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORB RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO
IEA
RGD
Ensembl
PMID:15781226 GO_REF:0000107 RGD:2325957 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA
RGD
Ensembl
PMID:12742352 GO_REF:0000107 RGD:9585648 NCBI chr 1:68,428,822...68,449,954
Ensembl chr 1:68,428,822...68,449,954
JBrowse link
G SCN10A sodium voltage-gated channel alpha subunit 10 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chr 3:38,696,807...38,816,217
Ensembl chr 3:38,696,802...38,816,286
JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,845,764...39,051,944
Ensembl chr 3:38,845,764...39,052,157
JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:166,195,185...166,375,987
Ensembl chr 2:166,195,185...166,376,001
JBrowse link
G SETX senataxin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430667|PMID:22767893) MGI
Ensembl
PMID:22767893 GO_REF:0000107 MGI:5430667 NCBI chr 9:132,261,356...132,356,744
Ensembl chr 9:132,261,356...132,354,986
JBrowse link
G SFTPA1 surfactant protein A1 ISO RGD PMID:12872443 RGD:4143473 NCBI chr10:79,610,939...79,615,455
Ensembl chr10:79,610,939...79,615,455
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chr 2:85,657,307...85,668,741
Ensembl chr 2:85,657,314...85,668,741
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chr 8:22,157,383...22,164,479
Ensembl chr 8:22,156,913...22,164,479
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SLC4A1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chr17:44,248,390...44,268,135
Ensembl chr17:44,248,390...44,268,141
JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in ISO
IEA
RGD
Ensembl
PMID:18482738 GO_REF:0000107 RGD:4889508 NCBI chr17:30,194,319...30,235,697
Ensembl chr17:30,194,319...30,236,002
JBrowse link
G SLC9A3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chr 5:470,456...524,449
Ensembl chr 5:470,456...524,449
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,811,334...17,836,986
Ensembl chr17:17,810,399...17,837,002
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chr 8:38,142,700...38,150,952
Ensembl chr 8:38,142,700...38,150,992
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in ISS UniProt GO_REF:0000024 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:85,607,784...85,643,870
Ensembl chr 6:85,607,779...85,644,063
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357
JBrowse link
G TIMELESS timeless circadian regulator involved_in ISS
TAS
IEA
(PMID:9856465) UniProt
PINC
Ensembl
PMID:9856465 GO_REF:0000024 GO_REF:0000107 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA
RGD
Ensembl
PMID:9483199 GO_REF:0000107 RGD:11552588 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TOP1 DNA topoisomerase I involved_in IEP (PMID:22904072) UniProt PMID:22904072 NCBI chr20:41,028,822...41,124,487
Ensembl chr20:41,028,822...41,124,487
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:18705647 GO_REF:0000107 RGD:5686363 NCBI chr11:18,017,555...18,046,269
Ensembl chr11:18,017,555...18,046,269
JBrowse link
G TPH2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chr12:71,938,845...72,032,440
Ensembl chr12:71,938,845...72,186,618
JBrowse link
G TYMS thymidylate synthetase involved_in ISO
IEA
RGD
Ensembl
PMID:19628084 GO_REF:0000107 RGD:5133425 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5436392|PMID:22678064) MGI
TreeGrafter
GO_Central
Ensembl
PMID:22678064 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5436392 NCBI chr 6:38,168,451...38,639,929
Ensembl chr 6:38,168,451...38,640,148
JBrowse link
G C3orf70 chromosome 3 open reading frame 70 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:185,076,838...185,153,060
Ensembl chr 3:185,076,838...185,153,060
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in ISO
IEA
RGD
Ensembl
PMID:17502429 GO_REF:0000107 RGD:10395242 NCBI chr22:38,290,691...38,318,084
Ensembl chr22:38,290,691...38,318,084
JBrowse link
G GPR157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,100,305...9,129,102
Ensembl chr 1:9,100,305...9,129,102
JBrowse link
G GPR176 G protein-coupled receptor 176 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:39,799,008...39,920,266
Ensembl chr15:39,799,008...39,920,936
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:23,945,286...23,980,617
Ensembl chr 3:23,945,286...23,980,617
JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (MGI:7572085|PMID:38172607) MGI PMID:38172607 MGI:7572085 NCBI chr16:4,796,968...4,802,633
Ensembl chr16:4,796,968...4,802,880
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:4949943|PMID:21525287) MGI PMID:21525287 MGI:4949943 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G TP53 tumor protein p53 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:38,290,691...38,398,915
Ensembl chr22:38,291,918...38,398,522
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr10:74,151,221...74,709,290
Ensembl chr10:74,151,202...74,709,963
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G ATF4 activating transcription factor 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,683
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA
IBA
IDA
(PMID:18411297) Ensembl
GO_Central
TreeGrafter
BHF-UCL
PMID:18411297 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:4,979,437...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:26,120,030...26,125,037
Ensembl chr12:26,120,030...26,125,037
JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in IDA
ISS
(PMID:23229515), (PMID:24005054) UniProt PMID:23229515 PMID:24005054 GO_REF:0000024 NCBI chr11:13,276,652...13,387,266
Ensembl chr11:13,276,652...13,387,266
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in IDA (PMID:10864977) ComplexPortal PMID:10864977 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G CARTPT CART prepropeptide involved_in ISS
IEA
HGNC-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:71,719,275...71,721,045
Ensembl chr 5:71,719,275...71,721,048
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:6,318,946...6,320,501
Ensembl chr11:6,318,946...6,320,532
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA
IBA
ISS
InterPro
GO_Central
TreeGrafter
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:150,282,554...150,287,093
Ensembl chr 1:150,282,543...150,287,093
JBrowse link
G CLOCK clock circadian regulator involved_in IDA
IBA
IEA
IMP
ISS
(PMID:10864977), (PMID:23229515), (PMID:24005054)
(PMID:21980503), (PMID:28985504)
ComplexPortal
GO_Central
TreeGrafter
InterPro
UniProt
Ensembl
BHF-UCL
PMID:10864977 PMID:21980503 PMID:23229515 PMID:24005054 PMID:28985504 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr10:35,126,846...35,212,958
Ensembl chr10:35,126,791...35,212,958
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA
IBA
ISS
Ensembl
GO_Central
TreeGrafter
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in ISS
IBA
IEA
UniProt
GO_Central
TreeGrafter
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G CSNK1D casein kinase 1 delta involved_in ISS UniProt GO_REF:0000024 NCBI chr17:82,239,019...82,273,750
Ensembl chr17:82,239,023...82,273,700
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:38,290,691...38,318,084
Ensembl chr22:38,290,691...38,318,084
JBrowse link
G DRD2 dopamine receptor D2 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3625767|PMID:16606840) MGI
Ensembl
BHF-UCL
PMID:16606840 GO_REF:0000024 GO_REF:0000107 MGI:3625767 NCBI chr11:113,409,605...113,475,398
Ensembl chr11:113,409,605...113,475,691
JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3611612|PMID:15878801) MGI
BHF-UCL
PMID:15878801 GO_REF:0000024 MGI:3611612 NCBI chr 3:114,127,580...114,199,407
Ensembl chr 3:114,127,580...114,199,407
JBrowse link
G EGR1 early growth response 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,465,479...138,469,303
Ensembl chr 5:138,465,479...138,469,303
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:69,319,780...69,387,227
Ensembl chr 2:69,319,780...69,387,250
JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:32,292,083...32,333,626
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308
JBrowse link
G HDAC3 histone deacetylase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3821398|PMID:19037247) MGI
Ensembl
UniProt
PMID:19037247 GO_REF:0000024 GO_REF:0000107 MGI:3821398 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849
JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IMP (PMID:20534529) UniProt PMID:20534529 NCBI chr  X:53,532,096...53,686,719
Ensembl chr  X:53,532,096...53,686,752
JBrowse link
G ID1 inhibitor of DNA binding 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr20:31,605,289...31,606,510
Ensembl chr20:31,605,283...31,606,515
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:23,557,926...23,559,501
Ensembl chr 1:23,557,926...23,559,501
JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:19,837,370...19,842,197
Ensembl chr 6:19,837,370...19,842,197
JBrowse link
G KDM2A lysine demethylase 2A involved_in IMP (PMID:26037310) UniProt PMID:26037310 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KDM5A lysine demethylase 5A involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:280,057...389,320
Ensembl chr12:280,057...389,320
JBrowse link
G KDM8 lysine demethylase 8 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr16:27,203,526...27,221,768
Ensembl chr16:27,203,508...27,221,768
JBrowse link
G KMT2A lysine methyltransferase 2A involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:118,436,492...118,526,832
Ensembl chr11:118,436,456...118,526,832
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:51,803,076...51,902,354
Ensembl chr  X:51,803,007...51,902,354
JBrowse link
G MC3R melanocortin 3 receptor involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:56,248,732...56,249,815
Ensembl chr20:56,248,732...56,249,815
JBrowse link
G MTA1 metastasis associated 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729
JBrowse link
G MYBBP1A MYB binding protein 1a involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:4,538,904...4,555,384
Ensembl chr17:4,538,897...4,555,386
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IMP
IEA
(PMID:20534529) UniProt
Ensembl
PMID:20534529 GO_REF:0000107 NCBI chr13:77,044,657...77,327,094
Ensembl chr13:77,042,474...77,327,094
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 7:106,248,298...106,285,888
Ensembl chr 7:106,248,298...106,285,966
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:70,109,782...70,456,446
Ensembl chr 8:70,109,782...70,403,808
JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:3821398 NCBI chr17:16,029,157...16,215,534
Ensembl chr17:16,029,065...16,218,185
JBrowse link
G NGFR nerve growth factor receptor involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:49,495,293...49,515,008
Ensembl chr17:49,495,293...49,515,008
JBrowse link
G NOCT nocturnin involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISS
IBA
IEA
UniProt
GO_Central
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:26,911,489...26,913,975
Ensembl chr 1:26,911,489...26,913,975
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA
IBA
IMP
(PMID:21628546) Ensembl
GO_Central
TreeGrafter
UniProt
PMID:21628546 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr21:14,961,235...15,065,936
Ensembl chr21:14,961,235...15,065,936
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:103,548,855...103,562,789
Ensembl chr 5:103,548,855...103,562,790
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,087...71,575,892
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:151,563,675...151,676,739
Ensembl chr  X:151,563,675...151,676,739
JBrowse link
G PER1 period circadian regulator 1 involved_in IDA
IEA
IBA
(PMID:18411297), (PMID:24005054) UniProt
TreeGrafter
GO_Central
Ensembl
PMID:18411297 PMID:24005054 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PER3 period circadian regulator 3 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:7,784,291...7,845,177
Ensembl chr 1:7,784,291...7,845,177
JBrowse link
G PML PML nuclear body scaffold involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,755
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA
IBA
ISS
Ensembl
GO_Central
TreeGrafter
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chr 4:81,087,370...81,217,836
Ensembl chr 4:81,087,370...81,215,222
JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408
JBrowse link
G RAI1 retinoic acid induced 1 involved_in IMP
IEA
IBA
(PMID:22578325) UniProt
TreeGrafter
GO_Central
Ensembl
PMID:22578325 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:17,681,458...17,811,453
Ensembl chr17:17,681,458...17,811,453
JBrowse link
G RBM4 RNA binding motif protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703208|PMID:17264215) MGI
Ensembl
PMID:17264215 GO_REF:0000107 MGI:3703208 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,667...66,668,374
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,664,998...66,677,887
Ensembl chr11:66,664,998...66,677,887
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:45,001,464...45,038,192
Ensembl chr19:45,001,461...45,038,192
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORC RAR related orphan receptor C involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845
JBrowse link
G SIRT1 sirtuin 1 involved_in IMP
IEA
ISS
(PMID:18662546) UniProt
Ensembl
PMID:18662546 GO_REF:0000024 GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SIRT6 sirtuin 6 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566
JBrowse link
G TOP1 DNA topoisomerase I involved_in IMP (PMID:22904072) UniProt PMID:22904072 NCBI chr20:41,028,822...41,124,487
Ensembl chr20:41,028,822...41,124,487
JBrowse link
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:38,290,691...38,398,915
Ensembl chr22:38,291,918...38,398,522
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:72,782,885...73,891,930
Ensembl chr16:72,782,885...73,891,871
JBrowse link
G ZPBP2 zona pellucida binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6364050|PMID:31560728) MGI
Ensembl
PMID:31560728 GO_REF:0000107 MGI:6364050 NCBI chr17:39,868,202...39,877,896
Ensembl chr17:39,868,202...39,877,896
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IMP (PMID:24423872) UniProt PMID:24423872 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G PER1 period circadian regulator 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G RBM4 RNA binding motif protein 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,667...66,668,374
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr20:34,231,981...34,311,836
Ensembl chr20:34,280,268...34,311,802
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6316762|PMID:30498428) MGI
Ensembl
PMID:30498428 GO_REF:0000107 MGI:6316762 NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G NLGN3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chr  X:71,144,841...71,175,307
Ensembl chr  X:71,144,821...71,175,255
JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829
JBrowse link
G TH tyrosine hydroxylase involved_in ISO
IEA
RGD
Ensembl
PMID:20980612 GO_REF:0000107 RGD:5128829 NCBI chr11:2,163,929...2,171,815
Ensembl chr11:2,163,929...2,171,815
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:55,106,469...55,284,713
Ensembl chr 6:55,106,460...55,282,617
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5436392|PMID:22678064) Ensembl
MGI
PMID:22678064 GO_REF:0000107 MGI:5436392 NCBI chr 6:38,168,451...38,639,929
Ensembl chr 6:38,168,451...38,640,148
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:2445919 NCBI chr15:26,543,552...26,773,763
Ensembl chr15:26,543,552...26,939,539
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CES1 carboxylesterase 1 acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) MGI PMID:30862682 MGI:6306193 NCBI chr16:55,802,851...55,833,096
Ensembl chr16:55,802,851...55,833,337
JBrowse link
G EGR1 early growth response 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,465,479...138,469,303
Ensembl chr 5:138,465,479...138,469,303
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in ISS
IEA
(PMID:19940926) BHF-UCL
Ensembl
PMID:19940926 GO_REF:0000107 NCBI chr18:62,325,310...62,391,288
Ensembl chr18:62,325,287...62,391,288
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445865|PMID:12451142) MGI
Ensembl
PMID:12451142 GO_REF:0000107 MGI:2445865 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in NAS (PMID:11018023) UniProt PMID:11018023 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chr11:62,908,679...62,921,878
Ensembl chr11:62,908,679...62,921,807
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G GNA11 G protein subunit alpha 11 involved_in ISS AgBase GO_REF:0000024 NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
JBrowse link
G GNAQ G protein subunit alpha q involved_in ISS AgBase GO_REF:0000024 NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:3838062 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G PER1 period circadian regulator 1 involved_in TAS (PMID:9323128) PINC PMID:9323128 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4420841|PMID:20080691) MGI
Ensembl
PMID:20080691 GO_REF:0000107 MGI:4420841 NCBI chr18:62,715,541...62,980,433
Ensembl chr18:62,715,541...62,980,433
JBrowse link
G SOX14 SRY-box transcription factor 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5440343|PMID:22920256) MGI
Ensembl
PMID:22920256 GO_REF:0000107 MGI:5440343 NCBI chr 3:137,764,315...137,766,334
Ensembl chr 3:137,764,315...137,766,334
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA
ISS
(PMID:18411297) Ensembl
BHF-UCL
PMID:18411297 GO_REF:0000107 NCBI chr 3:4,979,437...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr19:18,683,680...18,782,333
Ensembl chr19:18,683,678...18,782,333
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA
IBA
ISS
Ensembl
GO_Central
TreeGrafter
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:107,859,035...108,382,098
Ensembl chr 5:107,859,035...108,382,098
JBrowse link
G FBXL21P F-box and leucine rich repeat protein 21, pseudogene involved_in ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 5:135,930,297...135,941,996
Ensembl chr 5:135,934,368...135,941,671
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA
IBA
ISS
Ensembl
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:77,005,260...77,027,159
Ensembl chr13:76,992,598...77,027,195
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729
JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530176|PMID:15741322) MGI
Ensembl
PMID:15741322 GO_REF:0000107 MGI:3530176 NCBI chr19:17,231,883...17,245,919
Ensembl chr19:17,231,883...17,245,919
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
G OPN5 opsin 5 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:47,782,032...47,826,381
Ensembl chr 6:47,781,982...47,832,780
JBrowse link
G PDE6B phosphodiesterase 6B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:625,573...670,782
Ensembl chr 4:625,573...670,782
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA
IBA
ISS
Ensembl
GO_Central
TreeGrafter
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:7,784,291...7,845,177
Ensembl chr 1:7,784,291...7,845,177
JBrowse link
G PML PML nuclear body scaffold involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G RBM4 RNA binding motif protein 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,667...66,668,374
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,664,998...66,677,887
Ensembl chr11:66,664,998...66,677,887
JBrowse link
G SIK1 salt inducible kinase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr21:43,414,483...43,427,131
Ensembl chr21:43,414,483...43,427,131
JBrowse link
G SIK1B salt inducible kinase 1B (putative) involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr21:6,111,131...6,123,778
Ensembl chr21:6,111,131...6,123,778
JBrowse link
G TP53 tumor protein p53 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5642309|PMID:26131556) MGI
Ensembl
PMID:26131556 GO_REF:0000107 MGI:5642309 NCBI chr17:56,046,077...56,517,016
Ensembl chr17:55,882,301...56,517,016
JBrowse link
G CIART circadian associated repressor of transcription involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:150,282,554...150,287,093
Ensembl chr 1:150,282,543...150,287,093
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G EGR1 early growth response 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,465,479...138,469,303
Ensembl chr 5:138,465,479...138,469,303
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:120,272,908...120,750,337
Ensembl chr 7:120,273,175...120,750,337
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chr10:76,869,602...77,637,808
Ensembl chr10:76,869,601...77,638,369
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 4:86,010,405...86,594,074
Ensembl chr 4:85,990,007...86,594,625
JBrowse link
G MC3R melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:56,248,732...56,249,815
Ensembl chr20:56,248,732...56,249,815
JBrowse link
G MTA1 metastasis associated 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769195|PMID:17712420) MGI
Ensembl
PMID:17712420 GO_REF:0000107 MGI:3769195 NCBI chr17:42,536,241...42,544,449
Ensembl chr17:42,536,241...42,544,449
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:70,109,782...70,456,446
Ensembl chr 8:70,109,782...70,403,808
JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:16,029,157...16,215,534
Ensembl chr17:16,029,065...16,218,185
JBrowse link
G NMS neuromedin S acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:15635449 MGI
Ensembl
PMID:15635449 GO_REF:0000107 RGD:1359746 NCBI chr 2:100,470,482...100,483,280
Ensembl chr 2:100,470,482...100,483,280
JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC007375.2 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr14:77,098,311...77,225,462 JBrowse link
G CIPC CLOCK interacting pacemaker involved_in IEA
ISS
Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr14:77,098,258...77,117,287
Ensembl chr14:77,098,126...77,117,287
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IDA
IEA
IBA
(PMID:25936801) UniProt
TreeGrafter
GO_Central
PMID:25936801 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:151,563,675...151,676,739
Ensembl chr  X:151,563,675...151,676,739
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA
IMP
(PMID:28903391) Ensembl
UniProt
PMID:28903391 GO_REF:0000107 NCBI chr 8:22,275,316...22,357,568
Ensembl chr 8:22,275,316...22,357,568
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:75,369,379...75,455,815
Ensembl chr15:75,369,379...75,455,842
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252
JBrowse link
G ADORA1 adenosine A1 receptor involved_in ISO
IEA
RGD
Ensembl
PMID:19491711 GO_REF:0000107 RGD:2317916 NCBI chr 1:203,127,726...203,167,405
Ensembl chr 1:203,090,654...203,167,405
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone involved_in NAS (PMID:18329818) BHF-UCL PMID:18329818 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IDA (PMID:18329818) BHF-UCL PMID:18329818 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor involved_in ISO
IEA
in the sleep-promoting area of the lateral preoptic area of the brain RGD
Ensembl
PMID:16109808 GO_REF:0000107 RGD:1625234 NCBI chr 1:203,127,726...203,167,405
Ensembl chr 1:203,090,654...203,167,405
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:175,440,036...175,444,182
Ensembl chr 5:175,440,036...175,444,182
JBrowse link
G DRD2 dopamine receptor D2 involved_in ISO
IEA
RGD
Ensembl
PMID:12944496 GO_REF:0000107 RGD:1581422 NCBI chr11:113,409,605...113,475,398
Ensembl chr11:113,409,605...113,475,691
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in ISS
IDA
(PMID:23229515) UniProt
ComplexPortal
PMID:23229515 GO_REF:0000024 NCBI chr11:13,276,652...13,387,266
Ensembl chr11:13,276,652...13,387,266
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in IDA
ISS
IEA
(PMID:12738229) ComplexPortal
UniProt
Ensembl
PMID:12738229 GO_REF:0000024 GO_REF:0000107 NCBI chr12:27,332,836...27,425,286
Ensembl chr12:27,332,836...27,425,289
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CLOCK clock circadian regulator involved_in IEA
IDA
(PMID:12738229), (PMID:23229515) Ensembl
ComplexPortal
PMID:12738229 PMID:23229515 GO_REF:0000107 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:171,861,549...172,006,638
Ensembl chr 5:171,861,549...172,006,873
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604
JBrowse link
G MTNR1B melatonin receptor 1B involved_in ISO
IEA
RGD
Ensembl
PMID:12643943 GO_REF:0000107 RGD:9588678 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 involved_in ISO
IEA
RGD
Ensembl
PMID:12930792 GO_REF:0000107 RGD:7777105 NCBI chr10:50,990,888...52,298,350
Ensembl chr10:50,990,888...52,298,423
JBrowse link
G RORA RAR related orphan receptor A involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORC RAR related orphan receptor C involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:24043798) UniProt PMID:24043798 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G CASP1 caspase 1 ISO RGD PMID:16455762 RGD:2315921 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr20:37,251,086...37,261,814
Ensembl chr20:37,251,086...37,261,819
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr 7:30,963,953...30,979,528
Ensembl chr 7:30,938,669...30,993,254
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IDA (PMID:18329818) BHF-UCL PMID:18329818 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
G MTNR1B melatonin receptor 1B involved_in ISO
IEA
RGD
Ensembl
PMID:19429170 PMID:22171046 GO_REF:0000107 RGD:9588660 RGD:9588665 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 4:155,173,723...155,217,076
Ensembl chr 4:155,208,636...155,217,078
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in IMP
NAS
(PMID:15538933)
(PMID:18329818)
BHF-UCL PMID:15538933 PMID:18329818 NCBI chr20:37,251,086...37,261,814
Ensembl chr20:37,251,086...37,261,819
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr12:102,196,459...102,197,833
Ensembl chr12:102,196,459...102,197,833
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 1:7,847,612...7,913,249
Ensembl chr 1:7,843,083...7,853,512
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:82,371,765...82,377,458
Ensembl chr17:82,371,765...82,377,458
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor involved_in ISO
IEA
in the sleep-promoting area of the lateral preoptic area of the brain RGD
Ensembl
PMID:16109808 GO_REF:0000107 RGD:1625234 NCBI chr22:24,423,597...24,442,357
Ensembl chr22:24,417,879...24,442,357
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone involved_in NAS (PMID:18329818) BHF-UCL PMID:18329818 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G NPS neuropeptide S involved_in ISO
IEA
RGD
Ensembl
PMID:22300983 GO_REF:0000107 RGD:9831203 NCBI chr10:127,549,309...127,553,540
Ensembl chr10:127,549,309...127,553,540
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 1:7,847,612...7,913,249
Ensembl chr 1:7,843,083...7,853,512
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:82,371,765...82,377,458
Ensembl chr17:82,371,765...82,377,458
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:45,574,140...45,723,116
Ensembl chr 7:45,574,140...45,723,116
JBrowse link
G ATG7 autophagy related 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:11,272,397...11,576,353
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:4,979,437...4,985,323
Ensembl chr 3:4,979,437...4,985,323
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IDA (PMID:15917222) UniProt PMID:15917222 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:22,604,757...22,621,514
Ensembl chr 8:22,604,757...22,620,964
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IMP (PMID:27238018) UniProt PMID:27238018 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G CLOCK clock circadian regulator involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248
JBrowse link
G CSNK1D casein kinase 1 delta involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr17:82,239,019...82,273,750
Ensembl chr17:82,239,023...82,273,700
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:38,290,691...38,318,084
Ensembl chr22:38,290,691...38,318,084
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G DRD4 dopamine receptor D4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:637,269...640,706
Ensembl chr11:637,269...640,706
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA
IMP
(PMID:16717091) Ensembl
UniProt
PMID:16717091 GO_REF:0000107 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA
IMP
(PMID:17463251) Ensembl
UniProt
PMID:17463251 GO_REF:0000107 NCBI chr13:77,005,260...77,027,159
Ensembl chr13:76,992,598...77,027,195
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA
IMP
(PMID:27238018) Ensembl
UniProt
PMID:27238018 GO_REF:0000107 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
G HDAC3 histone deacetylase 3 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IMP
IEA
(PMID:30530698) UniProt
Ensembl
PMID:30530698 GO_REF:0000107 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,699...44,432,845
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IMP (PMID:24423872) UniProt PMID:24423872 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G KDM2A lysine demethylase 2A involved_in IMP (PMID:26037310) UniProt PMID:26037310 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:102,648,784...102,655,725
Ensembl chr 8:102,648,784...102,655,725
JBrowse link
G MAGED1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:51,803,076...51,902,354
Ensembl chr  X:51,803,007...51,902,354
JBrowse link
G MAGEL2 MAGE family member L2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:23,643,549...23,647,867
Ensembl chr15:23,643,549...23,647,867
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:86,010,405...86,594,074
Ensembl chr 4:85,990,007...86,594,625
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:48,306,677...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:180,233,143...180,292,083
Ensembl chr 5:180,233,143...180,292,099
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G NOCT nocturnin involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G NONO non-POU domain containing octamer binding involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:23,945,286...23,980,617
Ensembl chr 3:23,945,286...23,980,617
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in TAS (PMID:18511497) BHF-UCL PMID:18511497 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033
JBrowse link
G OPN3 opsin 3 involved_in NAS (PMID:10234000) UniProt PMID:10234000 NCBI chr 1:241,593,124...241,640,369
Ensembl chr 1:241,590,102...241,677,376
Ensembl chr 1:241,590,102...241,677,376
JBrowse link
G OPN4 opsin 4 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,472...8,156,506
JBrowse link
G PER2 period circadian regulator 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102
JBrowse link
G PML PML nuclear body scaffold involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,755
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IMP
IEA
(PMID:21712997) UniProt
Ensembl
PMID:21712997 GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IMP
IEA
IBA
(PMID:21712997) UniProt
TreeGrafter
GO_Central
Ensembl
PMID:21712997 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IMP
IEA
(PMID:21712997) UniProt
Ensembl
PMID:21712997 GO_REF:0000107 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:40,759,389...40,798,374
Ensembl chr 5:40,759,389...40,798,374
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:56,645,314...56,715,335
Ensembl chr 1:56,645,314...56,715,335
JBrowse link
G PRKCG protein kinase C gamma involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:53,881,094...53,907,652
Ensembl chr19:53,879,190...53,907,652
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178
JBrowse link
G PROX1 prospero homeobox 1 involved_in IMP (PMID:23723244) UniProt PMID:23723244 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G PSPC1 paraspeckle component 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr13:19,671,205...19,782,945
Ensembl chr13:19,674,752...19,783,019
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:60,488,284...61,229,302
Ensembl chr15:60,488,284...61,229,302
JBrowse link
G RORB RAR related orphan receptor B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 involved_in IMP
IEA
(PMID:26392558) UniProt
Ensembl
PMID:26392558 GO_REF:0000107 NCBI chr 3:150,741,125...150,763,169
Ensembl chr 3:150,741,125...150,763,477
JBrowse link
G SIRT6 sirtuin 6 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IMP (PMID:26392558) UniProt PMID:26392558 NCBI chr 3:141,051,347...141,148,611
Ensembl chr 3:141,051,347...141,148,611
JBrowse link
G SRRD SRR1 domain containing involved_in ISS UniProt GO_REF:0000024 NCBI chr22:26,483,877...26,494,658
Ensembl chr22:26,483,877...26,494,658
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,344...11,030,528
JBrowse link
G TIMELESS timeless circadian regulator involved_in IMP
IEA
(PMID:23418588) UniProt
Ensembl
PMID:23418588 GO_REF:0000107 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,388,525...40,417,896
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:38,290,691...38,398,915
Ensembl chr22:38,291,918...38,398,522
JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IMP
IEA
(PMID:24728990) UniProt
Ensembl
PMID:24728990 GO_REF:0000107 NCBI chr15:25,333,728...25,439,056
Ensembl chr15:25,333,728...25,439,051
JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IDA (PMID:27123980) UniProt PMID:27123980 NCBI chr16:8,892,097...8,963,906
Ensembl chr16:8,892,097...8,975,328
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IMP (PMID:29626158) UniProt PMID:29626158 NCBI chr  X:41,085,445...41,236,579
Ensembl chr  X:41,085,445...41,236,579
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,092,793...40,100,589
Ensembl chr17:40,092,793...40,100,589
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 1:154,567,778...154,580,013
Ensembl chr 1:154,567,778...154,580,013
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,593,580...110,631,440
Ensembl chr 1:110,519,837...110,631,474
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3575072|PMID:15215293) MGI
UniProt
PMID:15215293 GO_REF:0000024 MGI:3575072 NCBI chr 1:154,567,778...154,580,013
Ensembl chr 1:154,567,778...154,580,013
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252
JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in IEA
IMP
(PMID:25083013) Ensembl
UniProt
PMID:25083013 GO_REF:0000107 NCBI chr10:114,043,866...114,046,904
Ensembl chr10:114,043,866...114,046,904
JBrowse link
G CORT cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chr 1:10,450,031...10,451,998
Ensembl chr 1:10,450,031...10,451,998
JBrowse link
G CSF2 colony stimulating factor 2 involved_in ISO
IEA
RGD
Ensembl
PMID:12047622 GO_REF:0000107 RGD:10449529 NCBI chr 5:132,073,789...132,076,170
Ensembl chr 5:132,073,789...132,076,170
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr 3:114,127,580...114,199,407
Ensembl chr 3:114,127,580...114,199,407
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:180,912,670...180,982,753
Ensembl chr 3:180,868,141...180,982,753
JBrowse link
G NMU neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr 4:55,595,231...55,636,793
Ensembl chr 4:55,595,229...55,636,698
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA
IMP
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630) Ensembl
UniProt
PMID:17346965 PMID:19716732 PMID:24439663 PMID:24577121 PMID:26903630 GO_REF:0000107 NCBI chr 1:7,784,291...7,845,177
Ensembl chr 1:7,784,291...7,845,177
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr19:46,019,153...46,023,053
Ensembl chr19:46,019,153...46,023,053
JBrowse link
G PTGDS prostaglandin D2 synthase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,977,504...136,981,742
Ensembl chr 9:136,975,092...136,981,742
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:55,106,469...55,284,713
Ensembl chr 6:55,106,460...55,282,617
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,852,358...71,047,816
Ensembl chr 1:70,852,353...71,047,816
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 involved_in ISO
IEA
RGD
Ensembl
PMID:16310969 GO_REF:0000107 RGD:9835023 NCBI chr20:64,080,082...64,100,643
Ensembl chr20:64,080,082...64,100,643
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:72,782,885...73,891,930
Ensembl chr16:72,782,885...73,891,871
JBrowse link

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