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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm


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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AANAT aralkylamine N-acetyltransferase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:16166080 PMID:18321474 GO_REF:0000107 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chr16:45,206,233...45,215,761
Ensembl chr16:45,206,377...45,207,591
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chr21:61,211,044...61,430,691
Ensembl chr21:61,322,748...61,529,274
JBrowse link
G ACTB actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chr28:16,195,676...16,197,161
Ensembl chr12:52,426,752...52,427,879
JBrowse link
G ADCY1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chr21:12,976,687...13,117,876
Ensembl chr21:12,979,033...13,117,730
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chr11:45,006,220...45,031,481
Ensembl chr11:45,005,637...45,025,501
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chr15:81,128,427...81,142,779
Ensembl chr15:81,129,795...81,147,391
JBrowse link
G AGRN agrin acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chr20:130,383,226...130,416,926
Ensembl chr20:130,383,220...130,416,933
JBrowse link
G AGRP agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chr 5:59,972,728...59,974,728
Ensembl chr 5:59,973,922...59,974,660
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chr16:4,191,040...4,202,382
Ensembl chr16:4,191,172...4,202,385
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO (PMID:28985504)
(MGI:6103563|PMID:28985504)
UniProt PMID:28985504 MGI:6103563 NCBI chr12:7,643,484...7,701,334 JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:22,092,046...22,094,184
Ensembl chr19:22,091,667...22,095,230
JBrowse link
G ATF5 activating transcription factor 5 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chr 6:43,085,634...43,090,234
Ensembl chr 6:43,084,665...43,091,751
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:12451142) MGI PMID:12451142 NCBI chr 9:63,155,182...63,158,935
Ensembl chr 9:63,157,638...63,158,096
JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chr 6:36,166,586...36,195,343
Ensembl chr 6:36,166,262...36,195,363
JBrowse link
G ATP7B ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chr 3:29,817,712...29,899,302
Ensembl chr 3:29,816,860...29,899,077
JBrowse link
G BDNF brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr 1:37,386,825...37,451,380
Ensembl chr 1:37,449,593...37,450,336
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in ISO (MGI:5574300|PMID:19786558)
(PMID:28797635)
PMID:12397359
UniProt PMID:12397359 PMID:19786558 PMID:28797635 MGI:5574300 RGD:625726 NCBI chr22:41,049,673...41,055,365
Ensembl chr22:41,049,712...41,055,360
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:25,872,139...25,879,985
Ensembl chr11:25,874,108...25,876,826
JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12024206), (PMID:12150932), (PMID:12843397), (PMID:12897057)
(PMID:11163178), (PMID:26945058)
(PMID:17264215)
RGD
MGI
TreeGrafter
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... GO_REF:0000118 RGD:10043346 RGD:67927 NCBI chr 1:51,430,670...51,540,344
Ensembl chr 1:51,431,180...51,462,674
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 acts_upstream_of_or_within ISO (PMID:10864977) MGI PMID:10864977 NCBI chr11:27,067,523...27,141,740
Ensembl chr11:27,067,604...27,136,466
JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chr11:53,661,877...53,665,688
Ensembl chr11:53,659,336...53,664,861
JBrowse link
G CLDN4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chr28:9,242,054...9,244,972
Ensembl chr28:9,242,909...9,243,538
JBrowse link
G CLOCK clock circadian regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12024206), (PMID:8171325)
(PMID:12897057)
RGD
MGI
Ensembl
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 GO_REF:0000107 RGD:10401879 NCBI chr 7:13,015,198...13,134,741
Ensembl chr 7:13,051,454...13,127,240
JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:26945058) MGI PMID:26945058 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G CREB1 cAMP responsive element binding protein 1 involved_in ISO (MGI:5567906|PMID:20852621) RGD
UniProt
PMID:20852621 PMID:21367864 MGI:5567906 RGD:7247438 NCBI chr10:93,316,774...93,395,187
Ensembl chr10:93,316,840...93,388,832
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr 9:34,418,956...34,503,774
Ensembl chr 9:34,418,947...34,506,930
JBrowse link
G CRX cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chr 6:41,125,912...41,133,478
Ensembl chr 6:41,126,125...41,132,951
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12024206)
(PMID:17264215)
(PMID:12843397)
Ensembl
MGI
PMID:12024206 PMID:12843397 PMID:17264215 GO_REF:0000107 NCBI chr11:102,200,822...102,306,165
Ensembl chr11:102,204,224...102,306,182
JBrowse link
G CRY2 cryptochrome circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12024206)
(PMID:17264215)
RGD
MGI
Ensembl
PMID:11804325 PMID:12024206 PMID:17264215 GO_REF:0000107 RGD:632584 NCBI chr 1:19,459,734...19,498,807
Ensembl chr 1:19,472,231...19,498,790
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO RGD PMID:12759897 RGD:1298869 NCBI chr 8:60,496,607...60,691,457
Ensembl chr 8:60,496,733...60,524,238
JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chr21:8,235,396...8,343,086
Ensembl chr21:8,235,343...8,343,361
JBrowse link
G DDX5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chr16:56,766,669...56,773,767
Ensembl chr16:56,767,186...56,773,464
JBrowse link
G DHX9 DExH-box helicase 9 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chr25:46,485,602...46,534,046
Ensembl chr25:46,485,427...46,518,406
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chr20:35,376,738...36,215,388
Ensembl chr20:35,377,266...36,215,679
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chr 1:454,018...459,582 JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chr 2:81,318,509...81,467,227
Ensembl chr 2:81,425,902...81,467,677
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chr21:3,664,622...3,853,492
Ensembl chr21:3,666,339...3,853,239
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chr23:41,139,636...41,143,598
Ensembl chr23:41,140,065...41,142,374
JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chr11:52,020,912...52,043,809
Ensembl chr11:52,021,058...52,044,028
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chr 3:91,109,864...91,122,707
Ensembl chr 3:91,110,380...91,123,327
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chr14:79,201,128...79,222,363
Ensembl chr14:79,201,649...79,222,373
JBrowse link
G GNRHR gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 7:1,205,294...1,225,105 JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chr22:60,732,449...61,002,735
Ensembl chr22:60,733,465...60,997,239
JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISO (MGI:5568140|PMID:24736997) UniProt PMID:24736997 MGI:5568140 NCBI chr20:100,529,782...100,575,953
Ensembl chr20:100,530,369...100,558,556
JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:33,452,705...33,469,070
Ensembl chr 6:33,452,852...33,466,284
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr20:109,325,850...109,357,624 JBrowse link
G HOMER1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chr 4:73,591,105...73,729,680
Ensembl chr 4:73,589,495...73,728,353
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chr 5:20,511,329...20,612,114
Ensembl chr 5:20,511,762...20,611,336
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:84,081,713...84,191,112
Ensembl chr 9:84,083,396...84,190,876
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747) UniProt PMID:19217292 PMID:19740747 MGI:3838062 MGI:4420353 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr20:109,120,403...109,122,269
Ensembl chr20:109,120,691...109,123,210
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr17:52,349,908...52,353,218
Ensembl chr17:52,348,388...52,353,281
JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr11:97,624,498...97,708,730
Ensembl chr11:97,631,189...97,707,308
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,424,646...10,429,917
Ensembl chr22:10,421,996...10,429,662
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr20:74,204,481...74,207,835
Ensembl chr20:74,205,542...74,206,546
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 6:16,754,553...16,756,458
Ensembl chr 6:16,755,247...16,756,290
JBrowse link
G KCNH7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chr10:47,786,795...48,248,348
Ensembl chr10:47,785,318...47,950,144
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chr 9:53,727,790...54,557,252
Ensembl chr 9:54,182,910...54,554,716
JBrowse link
G KLF10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:97,496,695...97,503,818
Ensembl chr 8:97,496,678...97,503,620
JBrowse link
G KLF9 KLF transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:81,451,210...81,481,384
Ensembl chr12:81,454,394...81,480,094
JBrowse link
G LEP leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:37,632,748...37,741,100
Ensembl chr 1:37,632,710...37,741,330
JBrowse link
G LIPC lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921
JBrowse link
G LOC103214902 sodium/hydrogen exchanger 3 ISO RGD PMID:15780093 RGD:1581376 NCBI chr 4:362,417...408,113
Ensembl chr 4:365,135...408,033
JBrowse link
G LOC103221444 RNA-binding protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,594,565...7,607,824
Ensembl chr 1:7,594,677...7,604,199
JBrowse link
G LOC103247994 DNA-binding protein inhibitor ID-1 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr 2:36,008,660...36,009,880
Ensembl chr 2:36,008,636...36,010,017
JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr14:21,609,533...21,615,822
Ensembl chr14:21,611,040...21,615,615
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5527005|PMID:24209618) UniProt PMID:24209618 MGI:5527005 NCBI chr29:21,967,309...21,981,251
Ensembl chr29:21,963,982...21,981,579
JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chr 7:132,423,619...132,445,881
Ensembl chr 7:132,424,052...132,444,860
JBrowse link
G MTTP microsomal triglyceride transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,706,591...47,765,154
Ensembl chr 7:47,717,089...47,765,149
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in ISO
IEA
RGD
Ensembl
PMID:26547053 GO_REF:0000107 RGD:13781893 NCBI chr21:75,160,748...75,195,781
Ensembl chr21:75,158,596...75,196,025
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:65,855,232...66,151,733
Ensembl chr 8:65,855,235...66,040,947
JBrowse link
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 involved_in ISO (PMID:28985504) UniProt PMID:28985504 NCBI chr11:4,679,998...4,718,346
Ensembl chr11:4,680,053...4,721,520
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated involved_in IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr12:101,845,294...101,860,844
Ensembl chr12:101,845,592...101,846,980
JBrowse link
G NGF nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr20:18,361,795...18,413,987
Ensembl chr20:18,413,108...18,413,833
JBrowse link
G NGFR nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,894,000...69,914,209
Ensembl chr16:69,894,139...69,912,189
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr24:13,274,118...13,317,533
Ensembl chr24:13,310,846...13,317,056
JBrowse link
G NOCT nocturnin involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:85,987,854...86,019,271
Ensembl chr 7:86,015,576...86,018,474
JBrowse link
G NONO non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chr  X:61,082,923...61,110,895 JBrowse link
G NOS2 nitric oxide synthase 2 involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr16:21,533,011...21,576,645
Ensembl chr16:21,533,484...21,574,257
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chr14:4,529,048...4,705,167
Ensembl chr14:4,612,225...4,705,419
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:105,850,328...105,853,076
Ensembl chr20:105,850,598...105,853,060
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 acts_upstream_of_or_within
involved_in
ISO (PMID:12150932)
(MGI:5559671|PMID:14645221)
RGD
MGI
UniProt
PMID:12150932 PMID:14645221 PMID:24144766 MGI:5559671 RGD:10448984 NCBI chr16:66,078,990...66,086,927
Ensembl chr16:66,079,089...66,090,685
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chr23:45,904,926...46,031,804
Ensembl chr23:45,904,873...46,031,125
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,480,398...77,583,985
Ensembl chr 2:77,577,029...77,580,496
JBrowse link
G NRXN1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chr14:56,051,849...57,202,334 JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr20:6,987,903...7,027,381
Ensembl chr20:6,987,905...7,008,670
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr12:95,477,612...95,836,734
Ensembl chr12:95,479,447...95,620,364
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr29:6,441,824...6,831,029
Ensembl chr29:6,447,256...6,830,526
JBrowse link
G PAX4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chr21:96,425,496...96,435,846
Ensembl chr21:96,425,656...96,429,874
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chr26:39,273,982...39,300,170
Ensembl chr26:39,272,997...39,349,966
JBrowse link
G PER1 period circadian regulator 1 involved_in ISO
IEA
RGD
Ensembl
PMID:11122332 PMID:12176169 GO_REF:0000107 RGD:1299576 RGD:631234 NCBI chr16:7,520,122...7,536,176
Ensembl chr16:7,520,006...7,531,940
JBrowse link
G PER2 period circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO (PMID:12843397)
(MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747), (MGI:5503234|PMID:23785138), (MGI:5559671|PMID:14645221)
PMID:15094047
RGD
MGI
UniProt
PMID:9765215 PMID:9878515 PMID:12843397 PMID:14645221 PMID:15094047 More... MGI:3838062 MGI:4420353 MGI:5503234 MGI:5559671 RGD:10043346 RGD:61691 RGD:8554359 NCBI chr10:124,270,917...124,316,031
Ensembl chr10:124,269,543...124,315,904
JBrowse link
G PER3 period circadian regulator 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12843397) Ensembl
MGI
PMID:12843397 GO_REF:0000107 NCBI chr20:123,912,773...123,970,440
Ensembl chr20:123,912,208...123,970,549
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chr18:16,786,128...17,051,250 JBrowse link
G PRF1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chr 9:60,692,544...60,698,000
Ensembl chr 9:60,692,600...60,698,465
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chr 7:29,511,796...29,629,943
Ensembl chr 7:29,511,380...29,618,330
JBrowse link
G PRL prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chr17:49,922,750...49,938,084
Ensembl chr17:49,928,321...49,938,631
JBrowse link
G PROK2 prokineticin 2 acts_upstream_of_or_within ISO (PMID:12024206) MGI PMID:12024206 NCBI chr22:32,721,188...32,739,348 JBrowse link
G PROKR2 prokineticin receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12024206) Ensembl
MGI
PMID:12024206 GO_REF:0000107 NCBI chr 2:32,791,214...32,801,637
Ensembl chr 2:32,793,305...32,801,054
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:15,533,546...15,592,834
Ensembl chr25:15,538,964...15,587,059
JBrowse link
G RORA RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G RORB RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chr12:85,545,609...85,735,804
Ensembl chr12:85,545,608...85,732,780
JBrowse link
G RORC RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chr20:64,662,777...64,684,178
Ensembl chr20:64,664,358...64,683,211
JBrowse link
G SCN10A sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chr15:624,962...724,018
Ensembl chr15:625,742...721,963
JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:466,295...575,460
Ensembl chr15:467,210...575,110
JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:51,711,446...51,898,856
Ensembl chr10:51,714,931...51,829,621
JBrowse link
G SETX senataxin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22767893) Ensembl
MGI
PMID:22767893 GO_REF:0000107 NCBI chr12:5,773,122...5,872,372
Ensembl chr12:5,773,165...5,875,481
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chr14:21,487,424...21,497,491
Ensembl chr14:21,488,387...21,499,850
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chr 8:20,229,756...20,233,568
Ensembl chr 8:20,230,870...20,234,020
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867
JBrowse link
G SLC4A1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chr16:62,126,370...62,146,192
Ensembl chr16:62,131,709...62,146,182
JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chr16:23,929,196...23,969,665
Ensembl chr16:23,927,311...23,955,616
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:16,847,603...16,874,239
Ensembl chr16:16,845,491...16,859,554
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chr 8:36,164,891...36,174,424
Ensembl chr 8:36,167,694...36,174,583
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr  X:45,820,114...45,834,727
Ensembl chr  X:45,822,453...45,834,917
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr 9:14,900,503...14,924,017
Ensembl chr 9:14,900,945...14,923,447
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chr13:10,280,627...10,316,690
Ensembl chr13:10,285,130...10,316,197
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:96,552,233...96,631,220
Ensembl chr20:96,552,077...96,599,904
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,371,781...52,408,923
Ensembl chr11:52,372,375...52,389,284
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588
G TOP1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:22,655,085...22,751,082
Ensembl chr 2:22,651,995...22,751,102
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G TPH1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chr 1:46,921,682...46,947,906 JBrowse link
G TPH2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chr11:67,568,744...67,664,911 JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chr18:60,030,640...60,043,297
Ensembl chr18:60,030,658...60,041,856
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 acts_upstream_of_or_within ISO (PMID:22678064) MGI PMID:22678064 NCBI chr17:33,501,404...33,969,562 JBrowse link
G BTBD9 BTB domain containing 9 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr17:33,501,292...33,586,548 JBrowse link
G GPR157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:122,631,383...122,650,163
Ensembl chr20:122,632,218...122,649,115
JBrowse link
G GPR176 G protein-coupled receptor 176 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:43,085,416...43,205,075 JBrowse link
G LOC103223312 casein kinase I ISO RGD PMID:17502429 RGD:10395242 NCBI chr19:20,992,927...21,025,866
Ensembl chr19:20,998,009...21,022,576
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:6157418|PMID:29723273) UniProt PMID:29723273 MGI:6157418 NCBI chr15:68,632,142...68,668,467
Ensembl chr15:68,632,197...68,665,258
JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chr 5:4,466,954...4,472,967
Ensembl chr 5:4,466,824...4,472,780
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:21525287) MGI PMID:21525287 NCBI chr14:62,278,124...62,292,942
Ensembl chr14:62,278,461...62,281,127
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chr 1:110,733,097...110,760,119
Ensembl chr 1:110,734,737...110,742,186
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr 9:56,659,284...57,222,279
Ensembl chr 9:56,660,129...57,222,147
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:4820700|PMID:20106950) UniProt PMID:20106950 MGI:4820700 NCBI chr21:40,778,198...40,826,491
Ensembl chr21:40,778,218...40,826,478
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:22,092,046...22,094,184
Ensembl chr19:22,091,667...22,095,230
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:41,049,673...41,055,365
Ensembl chr22:41,049,712...41,055,360
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:25,872,139...25,879,985
Ensembl chr11:25,874,108...25,876,826
JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in ISO (MGI:5442460|PMID:22653727), (MGI:5568140|PMID:24736997), (MGI:6331398|PMID:31294688)
(MGI:3843127|PMID:19299583), (MGI:3843754|PMID:19141540), (MGI:4819446|PMID:20562852), (MGI:5437152|PMID:22611086), (MGI:5442460|PMID:22653727), (MGI:5553223|PMID:23525013)
(PMID:23229515), (PMID:24005054)
UniProt PMID:19141540 PMID:19299583 PMID:20562852 PMID:22611086 PMID:22653727 More... MGI:3843127 MGI:3843754 MGI:4819446 MGI:5437152 MGI:5442460 MGI:5553223 MGI:5568140 MGI:6331398 NCBI chr 1:51,430,670...51,540,344
Ensembl chr 1:51,431,180...51,462,674
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in ISO (PMID:10864977) ComplexPortal PMID:10864977 NCBI chr11:27,067,523...27,141,740
Ensembl chr11:27,067,604...27,136,466
JBrowse link
G CARTPT CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chr 4:66,058,755...66,060,635
Ensembl chr 4:66,058,769...66,061,112
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,504,726...58,507,200
Ensembl chr 1:58,504,782...58,507,438
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
G CLOCK clock circadian regulator involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:13,015,198...13,134,741
Ensembl chr 7:13,051,454...13,127,240
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr 9:34,418,956...34,503,774
Ensembl chr 9:34,418,947...34,506,930
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:102,200,822...102,306,165
Ensembl chr11:102,204,224...102,306,182
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:19,459,734...19,498,807
Ensembl chr 1:19,472,231...19,498,790
JBrowse link
G CSNK1D casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chr16:74,157,875...74,192,142
Ensembl chr16:74,160,648...74,192,108
JBrowse link
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16606840) Ensembl
MGI
PMID:16606840 GO_REF:0000107 NCBI chr 1:104,774,632...104,843,417
Ensembl chr 1:104,774,180...104,842,736
JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:15878801) MGI PMID:15878801 NCBI chr22:66,683,987...66,737,645
Ensembl chr22:66,691,177...66,736,690
JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,139,636...41,143,598
Ensembl chr23:41,140,065...41,142,374
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,740,332...37,803,389
Ensembl chr14:37,740,358...37,802,143
JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chr20:100,529,782...100,575,953
Ensembl chr20:100,530,369...100,558,556
JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chr13:59,873,248...59,904,542
Ensembl chr13:59,873,767...59,905,742
JBrowse link
G HDAC3 histone deacetylase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5882311|PMID:26776516)
(PMID:19037247)
UniProt
MGI
PMID:19037247 PMID:26776516 MGI:5882311 NCBI chr23:44,246,296...44,263,127 JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chr16:30,033,486...30,097,106
Ensembl chr16:30,036,766...30,097,088
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:49,661,506...49,814,551
Ensembl chr  X:49,660,790...49,808,572
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:4420353|PMID:19740747) UniProt PMID:19740747 MGI:4420353 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr14:98,961,546...98,964,384 JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:109,120,403...109,122,269
Ensembl chr20:109,120,691...109,123,210
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:52,349,908...52,353,218
Ensembl chr17:52,348,388...52,353,281
JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,004,109...7,152,072
Ensembl chr 1:7,003,784...7,082,720
JBrowse link
G KDM5A lysine demethylase 5A involved_in ISO (MGI:5288521|PMID:21960634) UniProt PMID:21960634 MGI:5288521 NCBI chr11:285,206...381,481
Ensembl chr11:286,728...381,430
JBrowse link
G KDM8 lysine demethylase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,907,345...24,927,028
Ensembl chr 5:24,907,657...24,928,995
JBrowse link
G KMT2A lysine methyltransferase 2A involved_in ISO (MGI:5607228|PMID:21113167) UniProt PMID:21113167 MGI:5607228 NCBI chr 1:109,819,748...109,912,763
Ensembl chr 1:109,853,758...109,908,113
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:37,632,748...37,741,100
Ensembl chr 1:37,632,710...37,741,330
JBrowse link
G LOC103221203 RNA-binding protein 4 acts_upstream_of_or_within ISO (PMID:17264215) MGI PMID:17264215 NCBI chr 1:7,604,440...7,638,536 JBrowse link
G LOC103221444 RNA-binding protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,594,565...7,607,824
Ensembl chr 1:7,594,677...7,604,199
JBrowse link
G LOC103223312 casein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:20,992,927...21,025,866
Ensembl chr19:20,998,009...21,022,576
JBrowse link
G LOC103223491 peroxisome proliferator-activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:28,614,892...28,709,272
Ensembl chr19:28,615,413...28,708,763
JBrowse link
G LOC103247994 DNA-binding protein inhibitor ID-1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:36,008,660...36,009,880
Ensembl chr 2:36,008,636...36,010,017
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chr  X:48,523,139...48,629,837
Ensembl chr  X:48,621,533...48,630,306
JBrowse link
G MC3R melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,867,355...7,871,292
Ensembl chr 2:7,869,518...7,870,489
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:83,315,917...83,368,746 JBrowse link
G MYBBP1A MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:4,019,823...4,036,811
Ensembl chr16:4,016,222...4,036,782
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,128,691...56,412,854
Ensembl chr 3:56,128,428...56,412,923
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr21:75,160,748...75,195,781
Ensembl chr21:75,158,596...75,196,025
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:65,855,232...66,151,733
Ensembl chr 8:65,855,235...66,040,947
JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:19037247) MGI PMID:19037247 NCBI chr16:15,442,315...15,629,411
Ensembl chr16:15,462,640...15,628,512
JBrowse link
G NGFR nerve growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,894,000...69,914,209
Ensembl chr16:69,894,139...69,912,189
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:85,987,854...86,019,271
Ensembl chr 7:86,015,576...86,018,474
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr14:4,529,048...4,705,167
Ensembl chr14:4,612,225...4,705,419
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:105,850,328...105,853,076
Ensembl chr20:105,850,598...105,853,060
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chr16:66,078,990...66,086,927
Ensembl chr16:66,079,089...66,090,685
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:77,480,398...77,583,985
Ensembl chr 2:77,577,029...77,580,496
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6382639|PMID:31875550) UniProt PMID:31875550 MGI:6382639 NCBI chr23:6,980,848...6,995,193
Ensembl chr23:6,978,704...6,994,660
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,351,047...61,393,541
Ensembl chr  X:61,351,054...61,394,305
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr  X:126,154,328...126,221,997
Ensembl chr  X:126,157,638...126,221,988
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,520,122...7,536,176
Ensembl chr16:7,520,006...7,531,940
JBrowse link
G PER2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:124,270,917...124,316,031
Ensembl chr10:124,269,543...124,315,904
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:123,912,773...123,970,440
Ensembl chr20:123,912,208...123,970,549
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr26:9,441,998...9,494,949
Ensembl chr26:9,451,112...9,494,931
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:25,882,385...26,563,530
Ensembl chr27:26,465,499...26,564,582
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,862,536...6,866,212
Ensembl chr 1:6,862,540...6,865,855
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:78,802,295...78,852,683
Ensembl chr14:78,804,548...78,852,682
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:105,962,182...105,986,114 JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chr 7:29,511,796...29,629,943
Ensembl chr 7:29,511,380...29,618,330
JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chr29:23,288,458...23,297,746
Ensembl chr29:23,288,835...23,297,518
JBrowse link
G RAI1 retinoic acid induced 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:16,717,767...16,847,014
Ensembl chr16:16,760,189...16,849,346
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in ISO (MGI:5574290|PMID:22894897) UniProt PMID:22894897 MGI:5574290 NCBI chr 6:38,463,414...38,500,487 JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,464,860...38,500,591 JBrowse link
G RORA RAR related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) UniProt PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:5603468|PMID:25083875) UniProt PMID:25083875 MGI:5603468 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590
JBrowse link
G TOP1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:22,655,085...22,751,082
Ensembl chr 2:22,651,995...22,751,102
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472), (MGI:5908516|PMID:26756164) UniProt PMID:23213472 PMID:26756164 MGI:5607210 MGI:5908516 NCBI chr 1:110,733,097...110,760,119
Ensembl chr 1:110,734,737...110,742,186
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr 5:55,912,325...56,174,010
Ensembl chr 5:55,907,983...56,085,112
JBrowse link
G ZPBP2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (PMID:31560728) MGI PMID:31560728 NCBI chr16:66,289,910...66,299,397 JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:30,729,697...30,749,793
Ensembl chr 7:30,731,175...30,749,876
JBrowse link
G LOC103221203 RNA-binding protein 4 involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr 1:7,604,440...7,638,536 JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,520,122...7,536,176
Ensembl chr16:7,520,006...7,531,940
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chr10:124,270,917...124,316,031
Ensembl chr10:124,269,543...124,315,904
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr 2:38,579,254...38,601,218
Ensembl chr 2:38,579,024...38,601,208
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:30498428) MGI PMID:30498428 NCBI chr26:37,605,891...37,622,302
Ensembl chr26:37,604,412...37,622,083
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chr21:114,741,918...116,988,691 JBrowse link
G NLGN3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chr  X:60,941,371...60,967,942
Ensembl chr  X:60,941,654...60,967,936
JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr14:4,529,048...4,705,167
Ensembl chr14:4,612,225...4,705,419
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chr 1:1,969,194...1,977,263
Ensembl chr 1:1,966,460...1,977,218
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:16,258,262...16,371,576
Ensembl chr17:16,258,439...16,294,204
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 acts_upstream_of_or_within ISO (PMID:22678064) MGI PMID:22678064 NCBI chr17:33,501,404...33,969,562 JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12419540) MGI PMID:12419540 NCBI chr26:55,319,667...55,543,116
Ensembl chr26:55,471,907...55,538,855
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,139,636...41,143,598
Ensembl chr23:41,140,065...41,142,374
JBrowse link
G LOC103233018 liver carboxylesterase 1 acts_upstream_of_or_within ISO (PMID:30862682) MGI PMID:30862682 NCBI chr 5:41,710,500...41,745,483 JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:5527011|PMID:24162845) UniProt PMID:24162845 MGI:5527011 NCBI chr16:66,078,990...66,086,927
Ensembl chr16:66,079,089...66,090,685
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,385,251...17,446,442 JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:12451142) MGI PMID:12451142 NCBI chr 9:63,155,182...63,158,935
Ensembl chr 9:63,157,638...63,158,096
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:10,978,464...10,991,650
Ensembl chr 1:10,989,207...10,990,589
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr 7:13,015,198...13,134,741
Ensembl chr 7:13,051,454...13,127,240
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292) MGI PMID:19217292 NCBI chr14:98,962,001...98,964,486 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within ISO (PMID:20080691) MGI PMID:20080691 NCBI chr18:16,786,128...17,051,250 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr18:16,785,503...17,049,752 JBrowse link
G SOX14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (PMID:22920256) MGI PMID:22920256 NCBI chr15:52,749,639...52,766,770
Ensembl chr15:52,762,326...52,763,045
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:52,371,781...52,408,923
Ensembl chr11:52,372,375...52,389,284
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chr 9:63,155,182...63,158,935
Ensembl chr 9:63,157,638...63,158,096
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chr22:41,049,673...41,055,365
Ensembl chr22:41,049,712...41,055,360
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chr 6:17,146,954...17,246,209 JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:102,200,822...102,306,165
Ensembl chr11:102,204,224...102,306,182
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:19,459,734...19,498,807
Ensembl chr 1:19,472,231...19,498,790
JBrowse link
G FBXL21P F-box and leucine rich repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chr23:38,680,722...38,692,592 JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,089,147...56,111,472
Ensembl chr 3:56,088,938...56,105,977
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr14:98,962,001...98,964,486 JBrowse link
G LOC103219558 serine/threonine-protein kinase SIK1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:87,204,386...87,217,044
Ensembl chr 2:87,204,357...87,216,180
JBrowse link
G LOC103221203 RNA-binding protein 4 involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr 1:7,604,440...7,638,536 JBrowse link
G LOC103221444 RNA-binding protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,594,565...7,607,824
Ensembl chr 1:7,594,677...7,604,199
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:83,315,917...83,368,746 JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (PMID:15741322) MGI PMID:15741322 NCBI chr 6:15,728,489...15,753,019
Ensembl chr 6:15,725,021...15,753,171
JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,478,464...24,509,720
Ensembl chr17:24,478,672...24,508,814
JBrowse link
G PDE6B phosphodiesterase 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:48,117,495...48,168,727
Ensembl chr27:48,118,190...48,162,368
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,520,122...7,536,176
Ensembl chr16:7,520,006...7,531,940
JBrowse link
G PER2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:124,270,917...124,316,031
Ensembl chr10:124,269,543...124,315,904
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:123,912,773...123,970,440
Ensembl chr20:123,912,208...123,970,549
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr26:9,441,998...9,494,949
Ensembl chr26:9,451,112...9,494,931
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,862,536...6,866,212
Ensembl chr 1:6,862,540...6,865,855
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chr14:78,802,295...78,852,683
Ensembl chr14:78,804,548...78,852,682
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:105,962,182...105,986,114 JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chr 1:110,733,097...110,760,119
Ensembl chr 1:110,734,737...110,742,186
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26131556) Ensembl
MGI
PMID:26131556 GO_REF:0000107 NCBI chr16:36,928,574...37,422,278
Ensembl chr16:36,929,938...37,223,997
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA Ensembl GO_REF:0000107
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chr21:114,741,918...116,988,691 JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,139,636...41,143,598
Ensembl chr23:41,140,065...41,142,374
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr14:98,962,001...98,964,486 JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 involved_in ISO (MGI:5432624|PMID:22815518) UniProt PMID:22815518 MGI:5432624 NCBI chr21:89,091,939...89,575,464 JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr21:89,092,906...89,133,507 JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chr 9:53,727,790...54,557,252
Ensembl chr 9:54,182,910...54,554,716
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 7:34,394,600...34,725,658
Ensembl chr 7:34,399,544...34,564,212
JBrowse link
G MC3R melanocortin 3 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,867,355...7,871,292
Ensembl chr 2:7,869,518...7,870,489
JBrowse link
G MTA1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:83,315,917...83,368,746 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17712420) Ensembl
MGI
PMID:17712420 GO_REF:0000107 NCBI chr16:63,735,411...63,744,365 JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:65,855,232...66,151,733
Ensembl chr 8:65,855,235...66,040,947
JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chr16:15,442,315...15,629,411
Ensembl chr16:15,462,640...15,628,512
JBrowse link
G NMS neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr14:4,200,756...4,214,848 JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chr14:4,529,048...4,705,167
Ensembl chr14:4,612,225...4,705,419
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chr 1:110,733,097...110,760,119
Ensembl chr 1:110,734,737...110,742,186
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIPC CLOCK interacting pacemaker involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr24:54,341,807...54,360,949
Ensembl chr24:54,349,341...54,357,937
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:102,200,822...102,306,165
Ensembl chr11:102,204,224...102,306,182
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:19,459,734...19,498,807
Ensembl chr 1:19,472,231...19,498,790
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:126,154,328...126,221,997
Ensembl chr  X:126,157,638...126,221,988
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chr10:124,270,917...124,316,031
Ensembl chr10:124,269,543...124,315,904
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in ISO (MGI:6285118|PMID:28903391)
(PMID:28903391)
UniProt PMID:28903391 MGI:6285118 NCBI chr 8:20,347,998...20,436,016
Ensembl chr 8:20,352,771...20,433,947
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chr20:97,698,953...97,715,762
Ensembl chr20:97,698,411...97,711,294
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,971,208...8,060,888
Ensembl chr26:7,975,484...8,058,278
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr25:26,180,898...26,221,424
Ensembl chr25:26,182,446...26,220,776
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:46,326,458...46,332,906
Ensembl chr22:46,325,913...46,330,962
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr25:26,180,898...26,221,424
Ensembl chr25:26,182,446...26,220,776
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr23:77,587,340...77,591,434 JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 1:104,774,632...104,843,417
Ensembl chr 1:104,774,180...104,842,736
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr20:62,093,830...62,293,360
Ensembl chr20:62,095,458...62,174,959
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr20:67,454,205...67,567,524
Ensembl chr20:67,454,334...67,524,229
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in ISO (PMID:23229515)
(MGI:4410413|PMID:19605937), (MGI:5442460|PMID:22653727)
ComplexPortal PMID:19605937 PMID:22653727 PMID:23229515 MGI:4410413 MGI:5442460 NCBI chr 1:51,430,670...51,540,344
Ensembl chr 1:51,431,180...51,462,674
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in ISO (PMID:12738229)
(MGI:4410413|PMID:19605937)
ComplexPortal
UniProt
PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr11:27,067,523...27,141,740
Ensembl chr11:27,067,604...27,136,466
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (MGI:4844267|PMID:18782782) UniProt PMID:18782782 MGI:4844267 NCBI chr 9:94,333,046...94,581,327
Ensembl chr 9:94,376,055...94,574,678
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,015,198...13,134,741
Ensembl chr 7:13,051,454...13,127,240
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:74,015,964...74,154,285
Ensembl chr23:74,015,964...74,154,062
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in ISO (MGI:6331398|PMID:31294688) UniProt PMID:31294688 MGI:6331398 NCBI chr 1:8,528,097...8,544,512
Ensembl chr 1:8,526,788...8,544,972
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr 1:84,222,150...84,238,850
Ensembl chr 1:84,223,147...84,235,463
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO (MGI:5574291|PMID:22356123) UniProt PMID:22356123 MGI:5574291 NCBI chr24:13,274,118...13,317,533
Ensembl chr24:13,310,846...13,317,056
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr16:66,078,990...66,086,927
Ensembl chr16:66,079,089...66,090,685
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr 9:78,858,269...80,188,163 JBrowse link
G RORA RAR related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr20:11,854,911...11,880,221
Ensembl chr20:11,855,005...11,879,717
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:96,552,233...96,631,220
Ensembl chr20:96,552,077...96,599,904
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr11:52,371,781...52,408,923
Ensembl chr11:52,372,375...52,389,284
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 7:21,872,036...21,890,095
Ensembl chr 7:21,876,132...21,891,407
JBrowse link
G CASP1 caspase 1 ISO RGD PMID:16455762 RGD:2315921 NCBI chr 1:96,389,697...96,400,610
Ensembl chr 1:96,389,657...96,400,849
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr 2:26,482,734...26,493,761
Ensembl chr 2:26,487,973...26,493,499
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr21:27,402,765...27,417,536
Ensembl chr21:27,404,886...27,417,521
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:46,326,458...46,332,906
Ensembl chr22:46,325,913...46,330,962
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr 1:84,222,150...84,238,850
Ensembl chr 1:84,223,147...84,235,463
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 7:101,696,081...101,773,782
Ensembl chr 7:101,770,551...101,771,696
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr20:62,093,830...62,293,360
Ensembl chr20:62,095,458...62,174,959
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:39,440,697...39,453,983
Ensembl chr 4:39,440,276...39,454,004
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr 2:26,482,734...26,493,761
Ensembl chr 2:26,487,973...26,493,499
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr11:97,436,682...97,438,345 JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr20:123,903,137...123,910,180 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr16:74,284,472...74,291,074
Ensembl chr16:74,288,333...74,289,502
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr19:7,691,678...7,706,781
Ensembl chr19:7,691,536...7,706,926
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO (MGI:5492265|PMID:23716671) UniProt PMID:23716671 MGI:5492265 NCBI chr15:15,129,976...16,017,107 JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:15,131,866...15,141,276 JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr 9:120,168,749...120,176,288 JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr20:123,903,137...123,910,180 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr16:74,284,472...74,291,074
Ensembl chr16:74,288,333...74,289,502
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,976,687...13,117,876
Ensembl chr21:12,979,033...13,117,730
JBrowse link
G ATG7 autophagy related 7 involved_in ISO (MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:6208175 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in ISO (MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:6282958 NCBI chr22:41,049,673...41,055,365
Ensembl chr22:41,049,712...41,055,360
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) UniProt PMID:15917222 NCBI chr 9:94,333,046...94,581,327
Ensembl chr 9:94,376,055...94,574,678
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:20,685,482...20,700,424
Ensembl chr 8:20,686,504...20,699,707
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in ISO (PMID:27238018) UniProt PMID:27238018 NCBI chr 9:70,475,736...70,492,947 JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,015,198...13,134,741
Ensembl chr 7:13,051,454...13,127,240
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:102,200,822...102,306,165
Ensembl chr11:102,204,224...102,306,182
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:19,459,734...19,498,807
Ensembl chr 1:19,472,231...19,498,790
JBrowse link
G CSNK1D casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:74,157,875...74,192,142
Ensembl chr16:74,160,648...74,192,108
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:12,508,712...12,543,127
Ensembl chr 1:12,508,443...12,544,913
JBrowse link
G DRD4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:454,018...459,582 JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,089,147...56,111,472
Ensembl chr 3:56,088,938...56,105,977
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,894,261...99,105,955
Ensembl chr 7:98,892,504...99,106,084
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chr22:60,732,449...61,002,735
Ensembl chr22:60,733,465...60,997,239
JBrowse link
G HDAC3 histone deacetylase 3 involved_in ISO (MGI:5882311|PMID:26776516) UniProt PMID:26776516 MGI:5882311 NCBI chr23:44,246,296...44,263,127 JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:19,390,870...19,466,300
Ensembl chr 2:19,388,891...19,421,664
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:30,729,697...30,749,793
Ensembl chr 7:30,731,175...30,749,876
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr14:98,962,001...98,964,486 JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,004,109...7,152,072
Ensembl chr 1:7,003,784...7,082,720
JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 8:97,496,695...97,503,818
Ensembl chr 8:97,496,678...97,503,620
JBrowse link
G LOC103223312 casein kinase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:20,992,927...21,025,866
Ensembl chr19:20,998,009...21,022,576
JBrowse link
G LOC103223491 peroxisome proliferator-activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:28,614,892...28,709,272
Ensembl chr19:28,615,413...28,708,763
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chr  X:48,523,139...48,629,837
Ensembl chr  X:48,621,533...48,630,306
JBrowse link
G MAGEL2 MAGE family member L2 involved_in ISO (MGI:5607219|PMID:22208286) UniProt PMID:22208286 MGI:5607219 NCBI chr26:57,975,936...57,980,492 JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 7:34,394,600...34,725,658
Ensembl chr 7:34,399,544...34,564,212
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 9:43,356,603...43,489,066
Ensembl chr 9:43,356,308...43,393,425
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr23:81,965,330...82,026,414
Ensembl chr23:81,963,899...82,013,659
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:85,987,854...86,019,271
Ensembl chr 7:86,015,576...86,018,474
JBrowse link
G NONO non-POU domain containing octamer binding involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chr  X:61,082,923...61,110,895 JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chr14:4,529,048...4,705,167
Ensembl chr14:4,612,225...4,705,419
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:4360821|PMID:19721697), (MGI:4429726|PMID:20159955), (MGI:6162161|PMID:29533925)
PMID:22425774
UniProt PMID:19721697 PMID:20159955 PMID:22425774 PMID:29533925 MGI:4360821 MGI:4429726 MGI:6162161 RGD:8553819 NCBI chr16:66,078,990...66,086,927
Ensembl chr16:66,079,089...66,090,685
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:6162161|PMID:29533925)
(MGI:5526909|PMID:23221024)
UniProt PMID:23221024 PMID:29533925 MGI:5526909 MGI:6162161 NCBI chr15:68,632,142...68,668,467
Ensembl chr15:68,632,197...68,665,258
JBrowse link
G OPN4 opsin 4 involved_in ISO (MGI:2667269|PMID:12808468) UniProt PMID:12808468 MGI:2667269 NCBI chr 9:45,199,897...45,212,193
Ensembl chr 9:45,200,707...45,211,636
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,520,122...7,536,176
Ensembl chr16:7,520,006...7,531,940
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250) UniProt PMID:11395012 PMID:19917250 MGI:1935010 MGI:4410390 NCBI chr10:124,270,917...124,316,031
Ensembl chr10:124,269,543...124,315,904
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr26:9,441,998...9,494,949
Ensembl chr26:9,451,112...9,494,931
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chr22:48,262,743...48,407,415
Ensembl chr22:48,275,600...48,407,418
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:25,882,385...26,563,530
Ensembl chr27:26,465,499...26,564,582
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,862,536...6,866,212
Ensembl chr 1:6,862,540...6,865,855
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr14:78,802,295...78,852,683
Ensembl chr14:78,804,548...78,852,682
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:105,962,182...105,986,114 JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:39,516,307...39,553,627 JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:76,258,063...76,319,512
Ensembl chr20:76,259,763...76,319,430
JBrowse link
G PRKCG protein kinase C gamma involved_in ISO (MGI:5467682|PMID:23185022) UniProt PMID:23185022 MGI:5467682 NCBI chr 6:46,574,560...46,600,329
Ensembl chr 6:46,575,439...46,600,364
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:15,533,546...15,592,834
Ensembl chr25:15,538,964...15,587,059
JBrowse link
G PSPC1 paraspeckle component 1 involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chr 3:1,160,227...1,232,390 JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836)
(MGI:5567901|PMID:23172836)
UniProt PMID:23172836 MGI:5567901 NCBI chr14:96,275,889...96,443,048
Ensembl chr14:96,276,023...96,432,790
JBrowse link
G RORA RAR related orphan receptor A involved_in ISO (MGI:5567901|PMID:23172836) UniProt PMID:23172836 MGI:5567901 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:85,545,609...85,735,804
Ensembl chr12:85,545,608...85,732,780
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chr20:97,698,953...97,715,762
Ensembl chr20:97,698,411...97,711,294
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,939,209...39,960,750
Ensembl chr15:39,939,832...39,959,734
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:6443593|PMID:30782483) UniProt PMID:30782483 MGI:6443593 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:49,442,817...49,529,654
Ensembl chr15:49,442,864...49,515,357
JBrowse link
G SRRD SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:6282940 NCBI chr19:9,387,861...9,396,219
Ensembl chr19:9,387,648...9,395,955
JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:6253084 NCBI chr20:120,753,764...120,765,259 JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,371,781...52,408,923
Ensembl chr11:52,372,375...52,389,284
JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:65,761,391...65,792,041
Ensembl chr16:65,761,416...65,792,701
JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in ISO (MGI:5607382|PMID:24728990)
(PMID:24728990)
UniProt PMID:24728990 MGI:5607382 NCBI chr26:56,638,936...56,738,555
Ensembl chr26:56,666,162...56,736,737
JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,470,137...8,540,736
Ensembl chr 5:8,469,230...8,540,770
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:29626158) UniProt PMID:29626158 NCBI chr  X:38,255,414...38,402,855
Ensembl chr  X:38,256,008...38,403,323
Ensembl chr  Y:38,256,008...38,403,323
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:6283959|PMID:30792350) UniProt PMID:30792350 MGI:6283959 NCBI chr16:66,078,990...66,086,927
Ensembl chr16:66,079,089...66,090,685
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr20:9,245,803...9,255,430
Ensembl chr20:9,247,231...9,253,795
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,933,524...22,942,074
Ensembl chr20:22,940,154...22,941,650
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chr25:3,350,798...3,405,040 JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chr20:9,245,803...9,255,430
Ensembl chr20:9,247,231...9,253,795
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:106,920,520...106,923,424
Ensembl chr 9:106,920,610...106,922,058
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr23:34,906,987...34,911,252
Ensembl chr23:34,908,911...34,911,140
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr22:66,683,987...66,737,645
Ensembl chr22:66,691,177...66,736,690
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in ISO (MGI:6706222|PMID:32893934) UniProt PMID:32893934 MGI:6706222 NCBI chr15:8,420,789...8,486,681
Ensembl chr15:8,421,654...8,486,384
JBrowse link
G NMU neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr 7:12,931,176...12,967,294
Ensembl chr 7:12,932,226...12,962,741
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:123,912,773...123,970,440
Ensembl chr20:123,912,208...123,970,549
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 6:39,474,077...39,478,635
Ensembl chr 6:39,474,170...39,477,914
JBrowse link
G PTGDS prostaglandin D2 synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,210,567...1,214,631
Ensembl chr12:1,211,487...1,214,531
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chr17:16,258,262...16,371,576
Ensembl chr17:16,258,439...16,294,204
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr20:62,093,830...62,293,360
Ensembl chr20:62,095,458...62,174,959
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:39,440,697...39,453,983
Ensembl chr 4:39,440,276...39,454,004
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr 5:55,912,325...56,174,010
Ensembl chr 5:55,907,983...56,085,112
JBrowse link

Term paths to the root