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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm


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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in ISO (PMID:12736803) RGD
UniProt
PMID:12736803 PMID:16166080 PMID:18321474 RGD:2301031 RGD:2312676 NCBI chrNW_004955506:5,828,666...5,834,812
Ensembl chrNW_004955506:5,828,659...5,834,812
JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Actb actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chrNW_004955500:7,635,946...7,655,579
Ensembl chrNW_004955500:7,637,089...7,651,162
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
G Agrn agrin acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chrNW_004955486:9,674,103...9,704,994
Ensembl chrNW_004955486:9,675,214...9,704,991
JBrowse link
G Agrp agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chrNW_004955484:9,165,120...9,166,789
Ensembl chrNW_004955484:9,165,120...9,166,789
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO (PMID:28985504)
(MGI:6103563|PMID:28985504)
UniProt PMID:28985504 MGI:6103563 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Atf5 activating transcription factor 5 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chrNW_004955559:1,008,208...1,013,023
Ensembl chrNW_004955559:1,008,208...1,013,023
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:12451142) MGI PMID:12451142 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:22520507) MGI PMID:22520507 NCBI chrNW_004955555:869,508...892,510
Ensembl chrNW_004955555:869,325...893,542
JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chrNW_004955431:5,228,395...5,297,120
Ensembl chrNW_004955431:5,229,126...5,269,616
JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (PMID:28797635)
(MGI:5574300|PMID:19786558)
PMID:12397359
UniProt PMID:12397359 PMID:19786558 PMID:28797635 MGI:5574300 RGD:625726 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO PMID:12397359
(MGI:5574300|PMID:19786558)
UniProt PMID:12397359 PMID:19786558 MGI:5574300 RGD:625726 NCBI chrNW_004955413:21,100,021...21,103,358 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within
involved_in
ISO (PMID:11163178), (PMID:26945058)
(PMID:12024206), (PMID:12150932), (PMID:12843397), (PMID:12897057)
(PMID:17264215)
(MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747), (MGI:5559671|PMID:14645221)
(MGI:6331398|PMID:31294688)
RGD
MGI
UniProt
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... MGI:3838062 MGI:4420353 MGI:5559671 MGI:6331398 RGD:10043346 RGD:67927 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718
JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chrNW_004955456:13,961,743...13,965,498
Ensembl chrNW_004955456:13,962,497...13,963,126
JBrowse link
G Clock clock circadian regulator acts_upstream_of_or_within
involved_in
ISO (PMID:12024206), (PMID:8171325)
(PMID:12897057)
(MGI:5559671|PMID:14645221)
RGD
MGI
UniProt
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 PMID:14645221 MGI:5559671 RGD:10401879 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:26945058) MGI PMID:26945058 NCBI chrNW_004955407:42,461,837...42,479,048
Ensembl chrNW_004955407:42,461,952...42,478,261
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO (MGI:5567906|PMID:20852621) RGD
UniProt
PMID:20852621 PMID:21367864 MGI:5567906 RGD:7247438 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chrNW_004955462:2,491,504...2,547,587
Ensembl chrNW_004955462:2,491,504...2,536,385
JBrowse link
G Crx cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chrNW_004955574:1,544,917...1,548,912
Ensembl chrNW_004955574:1,544,917...1,548,912
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in
acts_upstream_of_or_within
ISO (MGI:6294193|PMID:29561690)
(PMID:17264215)
(PMID:12024206)
(PMID:12843397)
(MGI:5464222|PMID:23133559)
UniProt
MGI
PMID:12024206 PMID:12843397 PMID:17264215 PMID:23133559 PMID:29561690 MGI:5464222 MGI:6294193 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO (PMID:12024206)
(PMID:17264215)
(MGI:4461092|PMID:20123978), (MGI:6294193|PMID:29561690)
RGD
MGI
UniProt
PMID:11804325 PMID:12024206 PMID:17264215 PMID:20123978 PMID:29561690 MGI:4461092 MGI:6294193 RGD:632584 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chrNW_004955456:3,513,779...3,582,851
Ensembl chrNW_004955456:3,513,042...3,582,911
JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chrNW_004955435:2,007,185...2,800,907
Ensembl chrNW_004955435:2,007,185...2,766,138
JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chrNW_004955476:11,424,347...11,426,962
Ensembl chrNW_004955476:11,424,411...11,426,960
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chrNW_004955404:685,170...692,797
Ensembl chrNW_004955404:680,594...693,665
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (MGI:5568140|PMID:24736997) UniProt PMID:24736997 MGI:5568140 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508
JBrowse link
G Homer1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chrNW_004955425:21,644,577...21,774,843
Ensembl chrNW_004955425:21,644,571...21,775,735
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chrNW_004955493:1,451,960...1,545,156
Ensembl chrNW_004955493:1,451,905...1,545,197
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004955422:29,337,969...29,339,178
Ensembl chrNW_004955422:29,337,757...29,339,178
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747) UniProt PMID:19217292 PMID:19740747 MGI:3838062 MGI:4420353 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004955452:3,537,352...3,538,921
Ensembl chrNW_004955452:3,537,021...3,560,954
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004955483:6,598,804...6,601,496
Ensembl chrNW_004955483:6,600,867...6,602,564
JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:28985504) UniProt PMID:28985504 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004955524:3,176,849...3,177,936 JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chrNW_004955449:11,052,767...11,495,193
Ensembl chrNW_004955449:11,052,777...11,491,379
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chrNW_004955437:14,749,808...15,457,274
Ensembl chrNW_004955437:14,749,914...15,454,028
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO (MGI:4438787|PMID:20070857) UniProt PMID:20070857 MGI:4438787 NCBI chrNW_004955417:27,165,146...27,168,604
Ensembl chrNW_004955417:27,164,839...27,168,604
JBrowse link
G Klf9 KLF transcription factor 9 involved_in ISO (PMID:22711835) UniProt PMID:22711835 NCBI chrNW_004955434:2,685,416...2,716,669
Ensembl chrNW_004955434:2,685,416...2,716,669
JBrowse link
G Lep leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5607511|PMID:24353284) UniProt PMID:24353284 MGI:5607511 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
G Lipc lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chrNW_004955450:15,947,869...16,062,449
Ensembl chrNW_004955450:15,948,187...16,048,766
JBrowse link
G LOC102022645 25-hydroxycholesterol 7-alpha-hydroxylase ISO RGD PMID:12759897 RGD:1298869 NCBI chrNW_004955444:14,274,818...14,446,068
Ensembl chrNW_004955444:14,275,345...14,444,426
JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004955424:1,953,623...1,961,164
Ensembl chrNW_004955424:1,953,623...1,961,164
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5527005|PMID:24209618) UniProt PMID:24209618 MGI:5527005 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chrNW_004955403:22,636,212...22,658,566
Ensembl chrNW_004955403:22,636,212...22,658,566
JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in ISO (MGI:5607511|PMID:24353284) UniProt PMID:24353284 MGI:5607511 NCBI chrNW_004955496:7,963,323...8,022,393
Ensembl chrNW_004955496:7,963,262...8,009,838
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISO (MGI:3843127|PMID:19299583) RGD
UniProt
PMID:19299583 PMID:26547053 MGI:3843127 RGD:13781893 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in ISO (PMID:28985504) UniProt PMID:28985504 NCBI chrNW_004955413:2,435,717...2,475,158
Ensembl chrNW_004955413:2,435,775...2,475,331
JBrowse link
G Ngf nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059
JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Noct nocturnin involved_in ISO (MGI:4837993|PMID:20685873), (MGI:5308514|PMID:22073225) UniProt PMID:20685873 PMID:22073225 MGI:4837993 MGI:5308514 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chrNW_004955475:10,833,514...10,853,460
Ensembl chrNW_004955475:10,833,189...10,853,519
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in ISO (PMID:28797635) UniProt PMID:28797635 NCBI chrNW_004955452:6,251,047...6,253,541
Ensembl chrNW_004955452:6,250,889...6,254,541
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 acts_upstream_of_or_within
involved_in
ISO (PMID:12150932)
(MGI:5559671|PMID:14645221)
RGD
MGI
UniProt
PMID:12150932 PMID:14645221 PMID:24144766 MGI:5559671 RGD:10448984 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO (PMID:21628546) UniProt PMID:21628546 NCBI chrNW_004955407:16,740,253...16,820,297
Ensembl chrNW_004955407:16,740,253...16,820,297
JBrowse link
G Nrxn1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955416:16,652,931...17,018,188
Ensembl chrNW_004955416:16,652,791...17,018,188
JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004955479:8,660,089...8,664,463
Ensembl chrNW_004955479:8,660,089...8,664,463
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chrNW_004955416:10,197,957...10,221,104
Ensembl chrNW_004955416:10,198,099...10,220,792
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:4420353|PMID:19740747), (MGI:4820700|PMID:20106950), (MGI:5464222|PMID:23133559), (MGI:5494765|PMID:23443664), (MGI:5503234|PMID:23785138), (MGI:5559671|PMID:14645221)
(PMID:14645221)
PMID:15094047
RGD
UniProt
PMID:11122332 PMID:12176169 PMID:14645221 PMID:15094047 PMID:19740747 More... MGI:4420353 MGI:4820700 MGI:5464222 MGI:5494765 MGI:5503234 MGI:5559671 RGD:1299576 RGD:631234 RGD:8554359 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 acts_upstream_of_or_within
involved_in
ISO (PMID:12843397)
(MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747), (MGI:5503234|PMID:23785138), (MGI:5559671|PMID:14645221)
PMID:15094047
RGD
MGI
UniProt
PMID:9765215 PMID:9878515 PMID:12843397 PMID:14645221 PMID:15094047 More... MGI:3838062 MGI:4420353 MGI:5503234 MGI:5559671 RGD:10043346 RGD:61691 RGD:8554359 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Per3 period circadian regulator 3 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004955486:5,058,602...5,101,480
Ensembl chrNW_004955486:5,059,773...5,101,637
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chrNW_004955402:46,563,918...46,773,349
Ensembl chrNW_004955402:46,666,599...46,772,387
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chrNW_004955437:20,700,912...20,705,076
Ensembl chrNW_004955437:20,700,718...20,706,929
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chrNW_004955433:5,286,594...5,387,571
Ensembl chrNW_004955433:5,286,153...5,491,924
JBrowse link
G Prl prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chrNW_004955483:4,495,257...4,503,377 JBrowse link
G Prok2 prokineticin 2 acts_upstream_of_or_within ISO (PMID:12024206) MGI PMID:12024206 NCBI chrNW_004955421:16,325,519...16,339,458
Ensembl chrNW_004955421:16,325,519...16,337,980
JBrowse link
G Prokr2 prokineticin receptor 2 acts_upstream_of_or_within ISO (PMID:12024206) MGI PMID:12024206 NCBI chrNW_004955415:15,867,017...15,878,471
Ensembl chrNW_004955415:15,866,554...15,878,582
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:5582866|PMID:23723244) UniProt PMID:23723244 MGI:5582866 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Rora RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorb RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Rorc RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004955427:25,157,179...25,244,020
Ensembl chrNW_004955427:25,157,179...25,243,473
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004955427:24,917,709...25,109,499
Ensembl chrNW_004955427:24,989,615...25,109,550
JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in ISO (PMID:25101983) MGI PMID:25101983 NCBI chrNW_004955449:7,858,156...8,017,569
Ensembl chrNW_004955449:7,923,801...8,017,569
JBrowse link
G Setx senataxin acts_upstream_of_or_within ISO (PMID:22767893) MGI PMID:22767893 NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004955424:1,849,313...1,858,087
Ensembl chrNW_004955424:1,849,314...1,858,087
JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004955403:45,649,149...45,651,421
Ensembl chrNW_004955403:45,649,122...45,651,837
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3807721|PMID:18662546) UniProt PMID:18662546 MGI:3807721 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chrNW_004955451:17,318,600...17,330,943
Ensembl chrNW_004955451:17,315,024...17,328,103
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chrNW_004955504:226,192...260,632
Ensembl chrNW_004955504:228,049...260,650
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (MGI:5574300|PMID:19786558) UniProt PMID:19786558 MGI:5574300 NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004955543:258,479...271,128
Ensembl chrNW_004955543:258,479...272,473
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004955429:19,503,197...19,526,454
Ensembl chrNW_004955429:19,503,197...19,528,027
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (MGI:5511073|PMID:24043798) UniProt PMID:24043798 MGI:5511073 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
JBrowse link
G Timeless timeless circadian regulator involved_in ISO (MGI:1344065|PMID:10231394), (MGI:5578016|PMID:23418588) UniProt PMID:10231394 PMID:23418588 MGI:1344065 MGI:5578016 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chrNW_004955445:15,834,017...15,922,785
Ensembl chrNW_004955445:15,834,017...15,922,785
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chrNW_004955414:32,803,417...32,828,682
Ensembl chrNW_004955414:32,800,477...32,828,501
JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chrNW_004955405:11,877,474...11,981,035
Ensembl chrNW_004955405:11,886,206...11,982,550
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO (PMID:22678064) MGI PMID:22678064 NCBI chrNW_004955437:4,765,234...5,145,033 JBrowse link
G Csnk1e casein kinase 1 epsilon ISO RGD PMID:17502429 RGD:10395242 NCBI chrNW_004955413:24,560,889...24,591,669
Ensembl chrNW_004955413:24,560,900...24,591,669
JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in ISO (MGI:5825412|PMID:27142930) UniProt PMID:27142930 MGI:5825412 NCBI chrNW_004955486:4,172,515...4,188,887
Ensembl chrNW_004955486:4,172,515...4,189,137
JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in ISO (MGI:5790765|PMID:26882873) UniProt PMID:26882873 MGI:5790765 NCBI chrNW_004955416:6,735,790...6,879,078
Ensembl chrNW_004955416:6,735,636...6,878,982
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:6157418|PMID:29723273) UniProt PMID:29723273 MGI:6157418 NCBI chrNW_004955430:15,812,449...15,834,341
Ensembl chrNW_004955430:15,812,448...15,834,412
JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chrNW_004955442:12,694,197...12,700,181
Ensembl chrNW_004955442:12,694,197...12,700,181
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:21525287) MGI PMID:21525287 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:4820700|PMID:20106950) UniProt PMID:20106950 MGI:4820700 NCBI chrNW_004955410:20,428,531...20,459,482
Ensembl chrNW_004955410:20,428,546...20,456,836
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (PMID:18411297)
(MGI:3798698|PMID:18411297), (MGI:6282958|PMID:30012868)
BHF-UCL PMID:18411297 PMID:30012868 MGI:3798698 MGI:6282958 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chrNW_004955413:21,100,021...21,103,358 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISO (PMID:23229515), (PMID:24005054)
(MGI:5442460|PMID:22653727), (MGI:5568140|PMID:24736997), (MGI:6331398|PMID:31294688)
(MGI:3843127|PMID:19299583), (MGI:3843754|PMID:19141540), (MGI:4819446|PMID:20562852), (MGI:5437152|PMID:22611086), (MGI:5442460|PMID:22653727), (MGI:5553223|PMID:23525013)
ComplexPortal
UniProt
PMID:19141540 PMID:19299583 PMID:20562852 PMID:22611086 PMID:22653727 More... MGI:3843127 MGI:3843754 MGI:4819446 MGI:5437152 MGI:5442460 MGI:5553223 MGI:5568140 MGI:6331398 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Cartpt CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chrNW_004955575:551,991...555,118
Ensembl chrNW_004955575:551,991...555,149
JBrowse link
G Cavin3 caveolae associated protein 3 involved_in ISO (MGI:5508702|PMID:23079727) UniProt PMID:23079727 MGI:5508702 NCBI chrNW_004955414:22,052,885...22,054,672
Ensembl chrNW_004955414:22,050,109...22,054,374
JBrowse link
G Ciart circadian associated repressor of transcription involved_in ISO (MGI:5545849|PMID:24385426), (MGI:5568140|PMID:24736997) UniProt PMID:24385426 PMID:24736997 MGI:5545849 MGI:5568140 NCBI chrNW_004955413:490,117...494,332 JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:21980503), (PMID:28985504)
(PMID:10864977), (PMID:23229515), (PMID:24005054)
(MGI:2683983|PMID:14672706), (MGI:3794495|PMID:18316400), (MGI:3843127|PMID:19299583), (MGI:3843754|PMID:19141540), (MGI:4837055|PMID:20430893), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5442460|PMID:22653727), (MGI:5503234|PMID:23785138), (MGI:6282958|PMID:30012868)
UniProt PMID:10864977 PMID:14672706 PMID:15147242 PMID:18316400 PMID:19141540 More... MGI:2683983 MGI:3794495 MGI:3843127 MGI:3843754 MGI:4837055 MGI:5292598 MGI:5297789 MGI:5442460 MGI:5503234 MGI:6282958 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chrNW_004955462:2,491,504...2,547,587
Ensembl chrNW_004955462:2,491,504...2,536,385
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5302136|PMID:22170608)
(MGI:3843127|PMID:19299583), (MGI:5464222|PMID:23133559), (MGI:5490394|PMID:23616524), (MGI:5545849|PMID:24385426)
UniProt PMID:19299583 PMID:22170608 PMID:23133559 PMID:23616524 PMID:24385426 MGI:3843127 MGI:5302136 MGI:5464222 MGI:5490394 MGI:5545849 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:3843127|PMID:19299583), (MGI:5490394|PMID:23616524)
(MGI:5302136|PMID:22170608)
UniProt PMID:19299583 PMID:22170608 PMID:23616524 MGI:3843127 MGI:5302136 MGI:5490394 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chrNW_004955506:904,659...936,293
Ensembl chrNW_004955506:904,660...935,330
JBrowse link
G Csnk1e casein kinase 1 epsilon involved_in ISO (MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:5294280 NCBI chrNW_004955413:24,560,889...24,591,669
Ensembl chrNW_004955413:24,560,900...24,591,669
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:16606840) MGI PMID:16606840 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:15878801) MGI PMID:15878801 NCBI chrNW_004955427:14,219,519...14,252,178
Ensembl chrNW_004955427:14,219,594...14,252,178
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:6219065|PMID:26471974), (MGI:6258624|PMID:29138967) UniProt PMID:26471974 PMID:29138967 MGI:6219065 MGI:6258624 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 involved_in ISO (MGI:5495336|PMID:23395176) UniProt PMID:23395176 MGI:5495336 NCBI chrNW_004955424:15,692,088...15,739,894
Ensembl chrNW_004955424:15,692,088...15,739,894
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
JBrowse link
G Hdac3 histone deacetylase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5882311|PMID:26776516)
(PMID:19037247)
UniProt
MGI
PMID:19037247 PMID:26776516 MGI:5882311 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234
JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chrNW_004955451:320,283...371,420
Ensembl chrNW_004955451:320,283...371,420
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:3794926|PMID:18332112) UniProt PMID:18332112 MGI:3794926 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:20534529)
(MGI:4458969|PMID:20534529)
UniProt PMID:20534529 MGI:4458969 NCBI chrNW_004955475:550,643...671,771
Ensembl chrNW_004955475:551,159...671,747
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:4420353|PMID:19740747) UniProt PMID:19740747 MGI:4420353 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (MGI:5288521|PMID:21960634) UniProt PMID:21960634 MGI:5288521 NCBI chrNW_004955454:6,774,308...6,865,047
Ensembl chrNW_004955454:6,774,476...6,865,033
JBrowse link
G Kdm8 lysine demethylase 8 involved_in ISO (MGI:6270295|PMID:30500822) UniProt PMID:30500822 MGI:6270295 NCBI chrNW_004955493:5,437,344...5,462,849
Ensembl chrNW_004955493:5,437,090...5,462,294
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (MGI:5607228|PMID:21113167) UniProt PMID:21113167 MGI:5607228 NCBI chrNW_004955412:19,586,435...19,670,149
Ensembl chrNW_004955412:19,586,141...19,665,527
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5607511|PMID:24353284) UniProt PMID:24353284 MGI:5607511 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
G Maged1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chrNW_004955543:2,939,960...3,052,442
Ensembl chrNW_004955543:2,975,259...3,052,504
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISO (MGI:3821632|PMID:19036988) UniProt PMID:19036988 MGI:3821632 NCBI chrNW_004955445:2,977,026...2,979,375
Ensembl chrNW_004955445:2,978,320...2,979,291
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISO (MGI:5009503|PMID:19129230) UniProt PMID:19129230 MGI:5009503 NCBI chrNW_004955467:12,390,371...12,405,055
Ensembl chrNW_004955467:12,390,037...12,404,971
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in ISO (PMID:20534529)
(MGI:4458969|PMID:20534529)
UniProt PMID:20534529 MGI:4458969 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISO (MGI:3843127|PMID:19299583) UniProt PMID:19299583 MGI:3843127 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncor1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:19037247) MGI PMID:19037247 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Noct nocturnin involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:3794495|PMID:18316400), (MGI:5518489|PMID:24048828), (MGI:6282961|PMID:29163035) UniProt PMID:18316400 PMID:24048828 PMID:29163035 MGI:3794495 MGI:5518489 MGI:6282961 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 involved_in ISO (MGI:6275703|PMID:25212631), (MGI:6282985|PMID:30555544) UniProt PMID:25212631 PMID:30555544 MGI:6275703 MGI:6282985 NCBI chrNW_004955452:6,251,047...6,253,541
Ensembl chrNW_004955452:6,250,889...6,254,541
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO (PMID:21628546)
(MGI:5586794|PMID:21628546)
UniProt PMID:21628546 MGI:5586794 NCBI chrNW_004955407:16,740,253...16,820,297
Ensembl chrNW_004955407:16,740,253...16,820,297
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO (MGI:6382639|PMID:31875550) UniProt PMID:31875550 MGI:6382639 NCBI chrNW_004955418:10,459,644...10,474,124
Ensembl chrNW_004955418:10,459,638...10,474,124
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (MGI:5495336|PMID:23395176) UniProt PMID:23395176 MGI:5495336 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (PMID:18411297), (PMID:24005054)
(MGI:4429726|PMID:20159955)
(MGI:3578039|PMID:15888647)
UniProt PMID:15888647 PMID:18411297 PMID:20159955 PMID:24005054 MGI:3578039 MGI:4429726 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:4429726|PMID:20159955)
(MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250), (MGI:5319572|PMID:22504074)
UniProt PMID:11395012 PMID:19917250 PMID:20159955 PMID:22504074 MGI:1935010 MGI:4410390 MGI:4429726 MGI:5319572 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:3715412|PMID:17476214) UniProt PMID:17476214 MGI:3715412 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO (MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:5294280 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:5294280 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:5294280 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (PMID:12725729) MGI PMID:12725729 NCBI chrNW_004955433:5,286,594...5,387,571
Ensembl chrNW_004955433:5,286,153...5,491,924
JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chrNW_004955409:37,369,507...37,378,034
Ensembl chrNW_004955409:37,369,234...37,378,093
JBrowse link
G Rai1 retinoic acid induced 1 involved_in ISO (PMID:22578325)
(MGI:5489969|PMID:22578325)
UniProt PMID:22578325 MGI:5489969 NCBI chrNW_004955577:185,404...296,613
Ensembl chrNW_004955577:183,051...200,139
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (MGI:5574290|PMID:22894897) UniProt PMID:22894897 MGI:5574290 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) UniProt PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18662546)
(MGI:3807721|PMID:18662546), (MGI:3843127|PMID:19299583)
UniProt PMID:18662546 PMID:19299583 MGI:3807721 MGI:3843127 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:5603468|PMID:25083875) UniProt PMID:25083875 MGI:5603468 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) UniProt PMID:22904072 NCBI chrNW_004955445:15,834,017...15,922,785
Ensembl chrNW_004955445:15,834,017...15,922,785
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472), (MGI:5908516|PMID:26756164) UniProt PMID:23213472 PMID:26756164 MGI:5607210 MGI:5908516 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chrNW_004955484:5,470,203...5,746,325
Ensembl chrNW_004955484:5,474,769...5,789,707
JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO (PMID:31560728) MGI PMID:31560728 NCBI chrNW_004955451:14,571,707...14,579,890
Ensembl chrNW_004955451:14,571,556...14,579,948
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chrNW_004955422:26,992,295...27,013,100
Ensembl chrNW_004955422:26,992,295...27,013,100
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:30498428) MGI PMID:30498428 NCBI chrNW_004955409:7,902,125...7,913,966
Ensembl chrNW_004955409:7,899,601...7,913,966
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chrNW_004955491:1,983,002...3,982,510
Ensembl chrNW_004955491:1,984,050...3,981,830
JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chrNW_004955475:10,712,170...10,735,857
Ensembl chrNW_004955475:10,712,170...10,735,857
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO (PMID:22678064) MGI PMID:22678064 NCBI chrNW_004955437:4,765,234...5,145,033 JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:12419540) MGI PMID:12419540 NCBI chrNW_004955533:2,879,437...2,938,952
Ensembl chrNW_004955533:2,573,599...2,938,952
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 involved_in ISO (MGI:6258624|PMID:29138967) UniProt PMID:29138967 MGI:6258624 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:5527011|PMID:24162845) UniProt PMID:24162845 MGI:5527011 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in ISO (MGI:4413614|PMID:19940926) BHF-UCL PMID:19940926 MGI:4413614 NCBI chrNW_004955402:46,242,329...46,298,157
Ensembl chrNW_004955402:46,264,164...46,296,368
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (PMID:12451142) MGI PMID:12451142 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004955599:349,744...356,714
Ensembl chrNW_004955599:349,744...356,714
JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292) MGI PMID:19217292 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within ISO (PMID:20080691) MGI PMID:20080691 NCBI chrNW_004955402:46,563,918...46,773,349
Ensembl chrNW_004955402:46,666,599...46,772,387
JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (PMID:22920256) MGI PMID:22920256 NCBI chrNW_004955501:1,155,920...1,157,870
Ensembl chrNW_004955501:1,156,670...1,157,392
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chrNW_004955524:2,884,654...2,940,601
Ensembl chrNW_004955524:2,884,654...2,940,815
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Fbxl21 Putative F-box/LRR-repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chrNW_004955408:30,997,793...31,012,276 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524) UniProt PMID:23452855 PMID:23452856 PMID:23616524 MGI:5470183 MGI:5487698 MGI:5490394 NCBI chrNW_004955404:30,215,140...30,229,798
Ensembl chrNW_004955404:30,215,108...30,229,798
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (PMID:15741322) MGI PMID:15741322 NCBI chrNW_004955524:961,232...965,012 JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) UniProt PMID:26392540 PMID:30240620 PMID:31607531 MGI:5699646 MGI:6376341 MGI:6378274 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (MGI:6378274|PMID:30240620) UniProt PMID:30240620 MGI:6378274 NCBI chrNW_004955514:234,972...279,420
Ensembl chrNW_004955514:234,972...279,420
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:3578039|PMID:15888647) UniProt PMID:15888647 MGI:3578039 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Sik1 salt inducible kinase 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chrNW_004955407:38,739,062...38,749,293
Ensembl chrNW_004955407:38,739,062...38,749,758
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:26131556) MGI PMID:26131556 NCBI chrNW_004955451:6,269,168...6,656,763
Ensembl chrNW_004955451:6,305,394...6,571,389
JBrowse link
G Ciart circadian associated repressor of transcription involved_in ISO (MGI:5568140|PMID:24736997) UniProt PMID:24736997 MGI:5568140 NCBI chrNW_004955413:490,117...494,332 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32889171) MGI PMID:32889171 NCBI chrNW_004955491:1,983,002...3,982,510
Ensembl chrNW_004955491:1,984,050...3,981,830
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:6258624|PMID:29138967) UniProt PMID:29138967 MGI:6258624 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in ISO (MGI:5432624|PMID:22815518) UniProt PMID:22815518 MGI:5432624 NCBI chrNW_004955479:2,062,607...2,545,576
Ensembl chrNW_004955479:2,062,608...2,543,125
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (PMID:16845385) MGI PMID:16845385 NCBI chrNW_004955437:14,749,808...15,457,274
Ensembl chrNW_004955437:14,749,914...15,454,028
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004955474:3,451,656...3,772,405
Ensembl chrNW_004955474:3,624,679...3,772,458
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISO (MGI:3821632|PMID:19036988) UniProt PMID:19036988 MGI:3821632 NCBI chrNW_004955445:2,977,026...2,979,375
Ensembl chrNW_004955445:2,978,320...2,979,291
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:17712420) MGI PMID:17712420 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Nms neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chrNW_004955470:6,505,345...6,516,964
Ensembl chrNW_004955470:6,505,345...6,516,957
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:12843397) MGI PMID:12843397 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK interacting pacemaker involved_in ISO (MGI:5532917|PMID:17310242) UniProt PMID:17310242 MGI:5532917 NCBI chrNW_004955438:1,016,721...1,036,379
Ensembl chrNW_004955438:1,016,086...1,036,372
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5532917|PMID:17310242)
(MGI:4410413|PMID:19605937)
UniProt PMID:17310242 PMID:19605937 MGI:4410413 MGI:5532917 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) UniProt PMID:25936801 NCBI chrNW_004955498:7,127,978...7,194,359 JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 involved_in ISO (PMID:28903391)
(MGI:6285118|PMID:28903391)
UniProt PMID:28903391 MGI:6285118 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004955452:13,267,968...13,283,823 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004955450:2,804,551...2,870,450
Ensembl chrNW_004955450:2,808,130...2,870,450
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) BHF-UCL PMID:18329818 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004955408:28,003,229...28,006,595
Ensembl chrNW_004955408:28,003,229...28,006,595
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISO (PMID:23229515)
(MGI:4410413|PMID:19605937), (MGI:5442460|PMID:22653727)
ComplexPortal PMID:19605937 PMID:22653727 PMID:23229515 MGI:4410413 MGI:5442460 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (MGI:4844267|PMID:18782782) UniProt PMID:18782782 MGI:4844267 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:12738229), (PMID:23229515)
(MGI:5442460|PMID:22653727)
ComplexPortal PMID:12738229 PMID:22653727 PMID:23229515 MGI:5442460 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (MGI:4844267|PMID:18782782) UniProt PMID:18782782 MGI:4844267 NCBI chrNW_004955408:24,703,477...24,834,522
Ensembl chrNW_004955408:24,687,493...24,834,345
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (MGI:6331398|PMID:31294688) UniProt PMID:31294688 MGI:6331398 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chrNW_004955414:1,394,709...1,406,990
Ensembl chrNW_004955414:1,394,923...1,407,217
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (MGI:5574291|PMID:22356123) UniProt PMID:22356123 MGI:5574291 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:24043798) UniProt PMID:24043798 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chrNW_004955447:9,327...21,212 JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chrNW_004955422:24,481,246...24,490,529 JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chrNW_004955410:32,084,210...32,114,844
Ensembl chrNW_004955410:32,102,367...32,115,080
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) BHF-UCL PMID:18329818 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chrNW_004955414:1,394,709...1,406,990
Ensembl chrNW_004955414:1,394,923...1,407,217
JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chrNW_004955471:11,796,278...11,804,114
Ensembl chrNW_004955471:11,796,278...11,804,114
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chrNW_004955422:24,481,246...24,490,529 JBrowse link
G Pmch pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chrNW_004955405:37,357,468...37,360,695
Ensembl chrNW_004955405:37,356,755...37,360,695
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955486:5,052,045...5,056,610
Ensembl chrNW_004955486:5,052,045...5,056,610
JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955506:756,859...761,891 JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004955455:7,886,720...7,906,214
Ensembl chrNW_004955455:7,895,974...7,906,505
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5492265|PMID:23716671) UniProt PMID:23716671 MGI:5492265 NCBI chrNW_004955420:3,360,745...4,171,587
Ensembl chrNW_004955420:3,549,021...4,167,493
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955486:5,052,045...5,056,610
Ensembl chrNW_004955486:5,052,045...5,056,610
JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955506:756,859...761,891 JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Atg7 autophagy related 7 involved_in ISO (MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:6208175 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:6282958 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) UniProt PMID:15917222 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (MGI:5495335|PMID:23398316) UniProt PMID:23398316 MGI:5495335 NCBI chrNW_004955403:46,027,997...46,042,154
Ensembl chrNW_004955403:46,027,998...46,042,154
JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in ISO (PMID:27238018) UniProt PMID:27238018 NCBI chrNW_004955425:14,210,681...14,226,474
Ensembl chrNW_004955425:14,210,680...14,226,474
JBrowse link
G Clock clock circadian regulator involved_in ISO (MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:6282958 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:1334825|PMID:10217146), (MGI:4366197|PMID:19833968), (MGI:4947326|PMID:21236481), (MGI:5490394|PMID:23616524), (MGI:5908518|PMID:26431207)
(MGI:5567898|PMID:23575670)
UniProt PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... MGI:1334825 MGI:4366197 MGI:4947326 MGI:5490394 MGI:5567898 MGI:5908518 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:1334825|PMID:10217146), (MGI:5490394|PMID:23616524)
(MGI:5567898|PMID:23575670)
UniProt PMID:10217146 PMID:23575670 PMID:23616524 MGI:1334825 MGI:5490394 MGI:5567898 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chrNW_004955506:904,659...936,293
Ensembl chrNW_004955506:904,660...935,330
JBrowse link
G Csnk1e casein kinase 1 epsilon involved_in ISO (MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:5294280 NCBI chrNW_004955413:24,560,889...24,591,669
Ensembl chrNW_004955413:24,560,900...24,591,669
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (MGI:5908518|PMID:26431207) UniProt PMID:26431207 MGI:5908518 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Drd4 dopamine receptor D4 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004955476:11,424,347...11,426,962
Ensembl chrNW_004955476:11,424,411...11,426,960
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16717091)
(MGI:3694308|PMID:16717091)
UniProt PMID:16717091 MGI:3694308 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (MGI:3710694|PMID:17463252), (MGI:3715674|PMID:17462724), (MGI:5490394|PMID:23616524)
(PMID:17463251)
UniProt PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 MGI:3710694 MGI:3715674 MGI:5490394 NCBI chrNW_004955404:30,215,140...30,229,798
Ensembl chrNW_004955404:30,215,108...30,229,798
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (MGI:6282935|PMID:27238018)
(PMID:27238018)
UniProt PMID:27238018 MGI:6282935 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO (MGI:5882311|PMID:26776516) UniProt PMID:26776516 MGI:5882311 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha involved_in ISO (MGI:6272229|PMID:30530698)
(PMID:30530698)
UniProt PMID:30530698 MGI:6272229 NCBI chrNW_004955445:12,925,248...12,962,501
Ensembl chrNW_004955445:12,924,662...12,984,281
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:24423872) UniProt PMID:24423872 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chrNW_004955417:27,165,146...27,168,604
Ensembl chrNW_004955417:27,164,839...27,168,604
JBrowse link
G Maged1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chrNW_004955543:2,939,960...3,052,442
Ensembl chrNW_004955543:2,975,259...3,052,504
JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (MGI:5607219|PMID:22208286) UniProt PMID:22208286 MGI:5607219 NCBI chrNW_004955416:31,091,306...31,095,420
Ensembl chrNW_004955416:31,091,151...31,095,484
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004955474:3,451,656...3,772,405
Ensembl chrNW_004955474:3,624,679...3,772,458
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (MGI:6159528|PMID:29750810) UniProt PMID:29750810 MGI:6159528 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Noct nocturnin involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chrNW_004955475:10,833,514...10,853,460
Ensembl chrNW_004955475:10,833,189...10,853,519
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:4360821|PMID:19721697), (MGI:4429726|PMID:20159955), (MGI:6162161|PMID:29533925)
PMID:22425774
UniProt PMID:19721697 PMID:20159955 PMID:22425774 PMID:29533925 MGI:4360821 MGI:4429726 MGI:6162161 RGD:8553819 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:5526909|PMID:23221024)
(MGI:6162161|PMID:29533925)
UniProt PMID:23221024 PMID:29533925 MGI:5526909 MGI:6162161 NCBI chrNW_004955430:15,812,449...15,834,341
Ensembl chrNW_004955430:15,812,448...15,834,412
JBrowse link
G Opn4 opsin 4 involved_in ISO (MGI:2667269|PMID:12808468) UniProt PMID:12808468 MGI:2667269 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250) UniProt PMID:11395012 PMID:19917250 MGI:1935010 MGI:4410390 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:3715412|PMID:17476214) UniProt PMID:17476214 MGI:3715412 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO (MGI:5294280|PMID:21930935)
(PMID:21712997)
(MGI:5086036|PMID:21712997)
UniProt PMID:21712997 PMID:21930935 MGI:5086036 MGI:5294280 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (PMID:21712997)
(MGI:5086036|PMID:21712997)
(MGI:5294280|PMID:21930935)
UniProt PMID:21712997 PMID:21930935 MGI:5086036 MGI:5294280 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5294280|PMID:21930935)
(PMID:21712997)
(MGI:5086036|PMID:21712997)
UniProt PMID:21712997 PMID:21930935 MGI:5086036 MGI:5294280 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4366197|PMID:19833968) UniProt PMID:19833968 MGI:4366197 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (MGI:4366197|PMID:19833968) UniProt PMID:19833968 MGI:4366197 NCBI chrNW_004955464:2,996,608...3,062,197
Ensembl chrNW_004955464:3,003,837...3,062,197
JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (MGI:5467682|PMID:23185022) UniProt PMID:23185022 MGI:5467682 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:5554971|PMID:24158435) UniProt PMID:24158435 MGI:5554971 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:23723244) UniProt PMID:23723244 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chrNW_004955497:574,678...641,885
Ensembl chrNW_004955497:575,340...642,809
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836)
(MGI:5567901|PMID:23172836)
UniProt PMID:23172836 MGI:5567901 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:5567901|PMID:23172836) UniProt PMID:23172836 MGI:5567901 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorb RAR related orphan receptor B involved_in ISO (MGI:3712731|PMID:17303680) UniProt PMID:17303680 MGI:3712731 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chrNW_004955452:13,267,968...13,283,823 JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISO (PMID:26392558)
(MGI:6241928|PMID:26392558)
UniProt PMID:26392558 MGI:6241928 NCBI chrNW_004955448:1,907,478...1,926,445
Ensembl chrNW_004955448:1,907,401...1,926,445
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:6443593|PMID:30782483) UniProt PMID:30782483 MGI:6443593 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) UniProt PMID:26392558 NCBI chrNW_004955508:4,539,531...4,615,439
Ensembl chrNW_004955508:4,539,516...4,615,439
JBrowse link
G Srrd SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:6282940 NCBI chrNW_004955455:1,076,113...1,090,346
Ensembl chrNW_004955455:1,075,652...1,083,102
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:6253084 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Timeless timeless circadian regulator involved_in ISO (MGI:5578016|PMID:23418588)
(PMID:23418588)
UniProt PMID:23418588 MGI:5578016 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISO (MGI:5613450|PMID:24321095) UniProt PMID:24321095 MGI:5613450 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:24728990)
(MGI:5607382|PMID:24728990)
UniProt PMID:24728990 MGI:5607382 NCBI chrNW_004955533:3,733,148...3,828,353
Ensembl chrNW_004955533:3,733,148...3,821,577
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (MGI:6253084|PMID:27123980)
(PMID:27123980)
UniProt PMID:27123980 MGI:6253084 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:29626158) UniProt PMID:29626158 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (MGI:6283959|PMID:30792350) UniProt PMID:30792350 MGI:6283959 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Il6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO (MGI:3770734|PMID:17925011) UniProt PMID:17925011 MGI:3770734 NCBI chrNW_004955435:14,074,346...14,080,026
Ensembl chrNW_004955435:14,074,346...14,078,806
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15215293) MGI PMID:15215293 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISO (PMID:25083013)
(MGI:6368107|PMID:25083013)
UniProt PMID:25083013 MGI:6368107 NCBI chrNW_004955431:19,025,663...19,027,026 JBrowse link
G Cort cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chrNW_004955486:3,152,745...3,154,956
Ensembl chrNW_004955486:3,152,810...3,154,205
JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chrNW_004955408:3,452,009...3,454,255
Ensembl chrNW_004955408:3,451,965...3,454,312
JBrowse link
G Drd3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chrNW_004955427:14,219,519...14,252,178
Ensembl chrNW_004955427:14,219,594...14,252,178
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO (MGI:6706222|PMID:32893934) UniProt PMID:32893934 MGI:6706222 NCBI chrNW_004955420:9,903,736...9,966,100
Ensembl chrNW_004955420:9,903,736...9,966,100
JBrowse link
G Nmu neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chrNW_004955447:15,324,702...15,361,726
Ensembl chrNW_004955447:15,328,973...15,357,830
JBrowse link
G Per3 period circadian regulator 3 involved_in ISO (PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
(MGI:5300112|PMID:21957163)
UniProt PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... MGI:5300112 NCBI chrNW_004955486:5,058,602...5,101,480
Ensembl chrNW_004955486:5,059,773...5,101,637
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISO (MGI:3687807|PMID:10781097) UniProt PMID:10781097 MGI:3687807 NCBI chrNW_004955513:5,009,530...5,012,781
Ensembl chrNW_004955513:5,009,625...5,012,781
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chrNW_004955411:970,892...1,010,138 JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISO (MGI:6159528|PMID:29750810) UniProt PMID:29750810 MGI:6159528 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chrNW_004955528:161,673...184,515
Ensembl chrNW_004955528:161,673...167,937
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chrNW_004955484:5,470,203...5,746,325
Ensembl chrNW_004955484:5,474,769...5,789,707
JBrowse link

Term paths to the root