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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm



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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AANAT aralkylamine N-acetyltransferase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:16166080 PMID:18321474 GO_REF:0000107 GO_REF:0000118 RGD:2301031 RGD:2312676 NCBI chr17:70,401,103...70,418,551
Ensembl chr17:75,951,915...75,967,411
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238
JBrowse link
G ACTB actin beta ISO RGD PMID:9483199 RGD:11552588
G ADCY1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chr 7:46,289,042...46,436,839
Ensembl chr 7:46,354,640...46,492,549
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chr12:39,957,394...39,981,049
Ensembl chr12:40,836,922...40,859,131
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chr 3:183,876,051...183,889,723
Ensembl chr 3:192,341,320...192,354,885
JBrowse link
G AGRN agrin acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 Ensembl chr 1:936,000...966,808 JBrowse link
G AGRP agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chr16:47,827,532...47,872,727
Ensembl chr16:67,216,008...67,217,258
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:34919270 RGD:401938593 NCBI chr17:4,766,616...4,777,253
Ensembl chr17:4,757,048...4,767,517
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G ATF4 activating transcription factor 4 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:2445865 NCBI chr10:64,714,546...64,716,341 JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (MGI:5495107|PMID:22520507) MGI PMID:22520507 MGI:5495107 NCBI chr19:38,854,243...38,882,034
Ensembl chr19:47,358,281...47,384,716
JBrowse link
G ATP7B ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chr13:33,063,698...33,144,528
Ensembl chr13:51,810,555...51,851,839
JBrowse link
G BDNF brain derived neurotrophic factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,194,758...60,199,344 JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1928563|PMID:11163178), (MGI:5923379|PMID:26945058)
(MGI:3703208|PMID:17264215)
(MGI:2179885|PMID:12024206), (MGI:2183702|PMID:12150932), (MGI:2667759|PMID:12843397), (MGI:2669067|PMID:12897057)
RGD
TreeGrafter
MGI
PMID:9735336 PMID:9878515 PMID:11163178 PMID:12024206 PMID:12150932 More... GO_REF:0000118 MGI:1928563 MGI:2179885 MGI:2183702 MGI:2667759 MGI:2669067 MGI:3703208 MGI:5923379 RGD:10043346 RGD:67927 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10864977) MGI
Ensembl
PMID:10864977 GO_REF:0000107 NCBI chr12:58,885,410...58,977,832
Ensembl chr12:61,503,973...61,596,580
JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chr12:31,174,446...31,178,597
Ensembl chr12:31,434,594...31,438,876
JBrowse link
G CLDN4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 Ensembl chr 7:80,983,832...80,984,461 JBrowse link
G CLOCK clock circadian regulator involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2179885|PMID:12024206), (MGI:66027|PMID:8171325)
(MGI:2669067|PMID:12897057)
RGD
Ensembl
MGI
PMID:8171325 PMID:10471199 PMID:12024206 PMID:12897057 GO_REF:0000107 MGI:2179885 MGI:2669067 MGI:66027 RGD:10401879 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5923379|PMID:26945058) MGI
Ensembl
PMID:26945058 GO_REF:0000107 MGI:5923379 NCBI chr21:32,322,185...32,346,850
Ensembl chr21:45,584,096...45,607,240
JBrowse link
G CREB1 cAMP responsive element binding protein 1 involved_in ISO
IEA
RGD
Ensembl
PMID:21367864 GO_REF:0000107 RGD:7247438 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr10:35,247,426...35,335,545
Ensembl chr10:35,825,218...35,912,432
JBrowse link
G CRX cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chr19:44,828,119...44,856,284 JBrowse link
G CRY1 cryptochrome circadian regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206)
(MGI:3703208|PMID:17264215)
(MGI:2667759|PMID:12843397)
MGI
Ensembl
PMID:12024206 PMID:12843397 PMID:17264215 GO_REF:0000107 MGI:2179885 MGI:2667759 MGI:3703208 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2179885|PMID:12024206)
(MGI:3703208|PMID:17264215)
RGD
Ensembl
MGI
PMID:11804325 PMID:12024206 PMID:17264215 GO_REF:0000107 MGI:2179885 MGI:3703208 RGD:632584 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO RGD PMID:12759897 RGD:1298869 NCBI chr 8:61,135,307...61,335,838
Ensembl chr 8:62,806,637...63,006,386
JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710
JBrowse link
G DDX5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142
JBrowse link
G DHX9 DExH-box helicase 9 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:5430667 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:3202908 PMID:8504424 PMID:19628084 RGD:11251745 RGD:1599793 RGD:5133425 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 PMID:19482058 RGD:401960072 RGD:7175073 NCBI chr11:640,401...646,775 JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:23,729,204...23,878,820
Ensembl chr21:37,137,253...37,231,987
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chr12:32,811,533...32,834,958
Ensembl chr12:33,063,434...33,084,994
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chr13:94,246,694...94,261,133
Ensembl chr13:113,315,868...113,329,995
JBrowse link
G FAS Fas cell surface death receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819 PMID:21367864 RGD:2293795 RGD:7247438 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397
JBrowse link
G GNRHR gonadotropin releasing hormone receptor involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 4:56,295,425...56,314,962
Ensembl chr 4:62,687,474...62,706,167
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:4461092|PMID:20123978) UniProt PMID:20123978 MGI:4461092 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chr19:35,943,720...35,959,795 JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
JBrowse link
G HOMER1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chr 5:35,794,627...35,936,111
Ensembl chr 5:36,064,665...36,205,928
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chr16:15,195,577...15,297,155
Ensembl chr16:23,067,554...23,168,609
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:87,480,970...87,598,212
Ensembl chr10:91,009,941...91,125,158
JBrowse link
G ID1 inhibitor of DNA binding 1 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr20:27,895,177...27,896,414
Ensembl chr20:28,535,582...28,536,311
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747) UniProt PMID:19217292 PMID:19740747 MGI:3838062 MGI:4420353 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,748,714...22,750,582
Ensembl chr 1:23,734,263...23,736,175
JBrowse link
G ID4 inhibitor of DNA binding 4 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:48,948,965...48,954,276
Ensembl chr 3:50,030,303...50,035,676
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr19:17,755,331...17,757,164 JBrowse link
G KCNH7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chr2B:49,657,021...50,140,216
Ensembl chr2B:167,033,119...167,506,691
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chr10:73,391,297...74,158,488
Ensembl chr10:76,062,047...76,820,644
JBrowse link
G KLF10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:99,302,943...99,310,099
Ensembl chr 8:101,462,915...101,469,982
JBrowse link
G KLF9 KLF transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,387,404...54,417,095
Ensembl chr 9:69,142,283...69,170,664
JBrowse link
G LEP leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G LIPC lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
JBrowse link
G LOC100983103 surfactant-associated protein 3 involved_in ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr14:17,224,870...17,273,252
Ensembl chr14:35,404,127...35,626,722
JBrowse link
G LOC100988373 LINE-1 retrotransposable element ORF2 protein ISO RGD PMID:15780093 RGD:1581376 NCBI chr 5:444,720...500,121
Ensembl chr 5:597,897...647,464
JBrowse link
G LOC103783265 pulmonary surfactant-associated protein A1 ISO RGD PMID:12872443 RGD:4143473 NCBI chr10:76,571,312...76,575,820 JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr2A:85,589,301...85,595,437
Ensembl chr2A:87,141,857...87,148,322
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5527005|PMID:24209618) UniProt PMID:24209618 MGI:5527005 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chr 4:178,693,869...178,720,351
Ensembl chr 4:190,897,192...190,921,677
JBrowse link
G MTTP microsomal triglyceride transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:91,987,756...92,047,127
Ensembl chr 4:102,648,793...102,708,107
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in ISO (MGI:3843127|PMID:19299583) RGD
UniProt
PMID:19299583 PMID:26547053 MGI:3843127 RGD:13781893 NCBI chr 7:98,227,071...98,262,254
Ensembl chr 7:110,952,876...110,981,967
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479
JBrowse link
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,766,608...4,811,871
Ensembl chr12:4,687,250...4,725,669
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated involved_in IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 9:62,467,360...62,482,926
Ensembl chr 9:90,567,116...90,568,504
JBrowse link
G NGF nerve growth factor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr 1:87,223,597...87,276,759 JBrowse link
G NGFR nerve growth factor receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966
JBrowse link
G NOCT nocturnin involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G NONO non-POU domain containing octamer binding involved_in ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chr  X:60,547,277...60,564,845
Ensembl chr  X:70,602,456...70,619,956
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5559671|PMID:14645221) UniProt PMID:14645221 MGI:5559671 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:26,174,055...26,176,689
Ensembl chr 1:27,230,362...27,232,942
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2183702|PMID:12150932) RGD
Ensembl
MGI
PMID:12150932 PMID:24144766 GO_REF:0000107 MGI:2183702 RGD:10448984 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:1,565,149...1,801,358
Ensembl chr21:15,065,197...15,068,673
JBrowse link
G NRXN1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:136,007,476...136,047,355 JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204
JBrowse link
G PAX4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chr 7:119,605,924...119,613,579
Ensembl chr 7:132,260,859...132,268,516
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chr15:22,706,520...22,731,672
Ensembl chr15:40,794,144...40,821,763
JBrowse link
G PER1 period circadian regulator 1 involved_in ISO
IEA
RGD
Ensembl
PMID:11122332 PMID:12176169 GO_REF:0000107 RGD:1299576 RGD:631234 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G PER2 period circadian regulator 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3838062|PMID:19217292), (MGI:4420353|PMID:19740747), (MGI:5503234|PMID:23785138), (MGI:5559671|PMID:14645221)
(MGI:2667759|PMID:12843397)
PMID:15094047
RGD
UniProt
MGI
PMID:9765215 PMID:9878515 PMID:12843397 PMID:14645221 PMID:15094047 More... MGI:2667759 MGI:3838062 MGI:4420353 MGI:5503234 MGI:5559671 RGD:10043346 RGD:61691 RGD:8554359 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
G PER3 period circadian regulator 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667759|PMID:12843397) MGI
Ensembl
PMID:12843397 GO_REF:0000107 MGI:2667759 NCBI chr 1:6,547,667...6,607,905
Ensembl chr 1:7,795,552...7,855,922
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chr18:56,084,851...56,338,551 JBrowse link
G PRF1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chr10:67,071,141...67,078,057
Ensembl chr10:69,597,574...69,603,070
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chr 4:42,987,217...43,114,993
Ensembl chr 4:48,836,953...48,960,383
JBrowse link
G PRL prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chr 6:22,109,974...22,125,433
Ensembl chr 6:22,450,132...22,459,829
JBrowse link
G PROK2 prokineticin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206) MGI
Ensembl
PMID:12024206 GO_REF:0000107 MGI:2179885 NCBI chr 3:71,711,334...71,724,865
Ensembl chr 3:73,068,599...73,080,897
JBrowse link
G PROKR2 prokineticin receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179885|PMID:12024206) MGI
Ensembl
PMID:12024206 GO_REF:0000107 MGI:2179885 NCBI chr20:5,311,043...5,319,148
Ensembl chr20:5,102,997...5,106,655
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,022,622...62,035,570
Ensembl chr11:65,345,796...65,358,473
JBrowse link
G RORA RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460
JBrowse link
G RORB RAR related orphan receptor B ISO RGD PMID:15781226 PMID:18321474 RGD:2301031 RGD:2325957 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
JBrowse link
G RORC RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904
JBrowse link
G SCN10A sodium voltage-gated channel alpha subunit 10 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chr 3:38,593,765...38,691,172
Ensembl chr 3:38,876,068...38,972,247
JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,741,485...38,948,400
Ensembl chr 3:39,024,921...39,128,015
JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:53,468,290...53,643,747
Ensembl chr2B:170,944,974...171,054,013
JBrowse link
G SETX senataxin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430667|PMID:22767893) MGI
Ensembl
PMID:22767893 GO_REF:0000107 MGI:5430667 NCBI chr 9:103,381,356...103,474,902
Ensembl chr 9:132,016,767...132,109,665
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chr2A:85,708,485...85,718,120
Ensembl chr2A:87,257,244...87,268,332
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chr 8:21,402,060...21,409,438
Ensembl chr 8:18,345,940...18,348,764
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SLC4A1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chr17:13,131,851...13,150,872
Ensembl chr17:13,302,796...13,317,312
JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chr17:26,546,177...26,572,301
Ensembl chr17:27,050,900...27,092,882
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:33,458,196...33,484,643
Ensembl chr17:38,405,794...38,432,045
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr  X:40,993,911...41,007,362
Ensembl chr  X:48,855,494...48,868,131
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr10:14,882,491...14,907,724
Ensembl chr10:15,211,360...15,237,097
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:83,491,803...83,527,256 JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TOP1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,368,606...37,464,649
Ensembl chr20:38,468,452...38,562,652
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G TPH1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chr11:18,070,576...18,099,539
Ensembl chr11:17,754,893...17,778,076
JBrowse link
G TPH2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chr12:69,460,883...69,557,329
Ensembl chr12:72,318,908...72,412,557
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chr18:13,653,085...13,668,478
Ensembl chr18:17,295,182...17,310,320
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5436392|PMID:22678064) MGI
TreeGrafter
Ensembl
PMID:22678064 GO_REF:0000107 GO_REF:0000118 MGI:5436392 NCBI chr 6:37,733,575...38,211,857
Ensembl chr 6:38,928,879...39,358,424
JBrowse link
G CSNK1E casein kinase 1 epsilon ISO RGD PMID:17502429 RGD:10395242 NCBI chr22:19,202,599...19,229,344
Ensembl chr22:37,027,094...37,072,942
JBrowse link
G GPR157 G protein-coupled receptor 157 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,857,904...7,884,669
Ensembl chr 1:9,093,493...9,117,748
JBrowse link
G GPR176 G protein-coupled receptor 176 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,739,092...18,858,618
Ensembl chr15:36,995,149...37,007,073
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:23,857,317...23,892,533
Ensembl chr 3:24,185,798...24,215,831
JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (MGI:7572085|PMID:38172607) MGI PMID:38172607 MGI:7572085 NCBI chr16:3,721,063...3,727,056
Ensembl chr16:4,887,051...4,892,607
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:4949943|PMID:21525287) MGI PMID:21525287 MGI:4949943 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr10:70,672,967...71,236,950
Ensembl chr10:73,342,900...73,902,490
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:4820700|PMID:20106950) UniProt PMID:20106950 MGI:4820700 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171
JBrowse link
G ATF4 activating transcription factor 4 involved_in ISO (MGI:5292598|PMID:21768648) UniProt PMID:21768648 MGI:5292598 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,194,758...60,199,344 JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:58,885,410...58,977,832
Ensembl chr12:61,503,973...61,596,580
JBrowse link
G CARTPT CART prepropeptide involved_in ISO PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chr 5:43,591,683...43,593,586
Ensembl chr 5:44,236,114...44,238,229
JBrowse link
G CAVIN3 caveolae associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,451,364...6,453,206
Ensembl chr11:6,133,656...6,135,485
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:125,627,812...125,632,367
Ensembl chr 1:129,278,742...129,283,271
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G CREM cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) UniProt PMID:23443664 MGI:5494765 NCBI chr10:35,247,426...35,335,545
Ensembl chr10:35,825,218...35,912,432
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G CSNK1D casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935) UniProt PMID:19414593 PMID:21930935 MGI:3849793 MGI:5294280 NCBI chr17:76,648,677...76,683,054
Ensembl chr17:82,462,467...82,494,348
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,202,599...19,229,344
Ensembl chr22:37,027,094...37,072,942
JBrowse link
G DRD2 dopamine receptor D2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3625767|PMID:16606840) MGI
Ensembl
PMID:16606840 GO_REF:0000107 MGI:3625767 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of_or_within ISO (MGI:3611612|PMID:15878801) MGI PMID:15878801 MGI:3611612 NCBI chr 3:111,265,834...111,317,176
Ensembl chr 3:118,187,636...118,237,403
JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) UniProt PMID:15226430 MGI:5567917 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004
JBrowse link
G HDAC3 histone deacetylase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821398|PMID:19037247) MGI
Ensembl
PMID:19037247 GO_REF:0000107 MGI:3821398 NCBI chr 5:136,981,790...136,997,786
Ensembl chr 5:143,094,406...143,110,322
JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,746,228...45,897,250
Ensembl chr  X:53,855,404...54,005,366
JBrowse link
G ID1 inhibitor of DNA binding 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:27,895,177...27,896,414
Ensembl chr20:28,535,582...28,536,311
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:22,748,714...22,750,582
Ensembl chr 1:23,734,263...23,736,175
JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,470,549...62,616,135
Ensembl chr11:65,793,464...65,930,498
JBrowse link
G KDM5A lysine demethylase 5A involved_in ISO (MGI:5288521|PMID:21960634) UniProt PMID:21960634 MGI:5288521 NCBI chr12:342,555...452,161
Ensembl chr12:319,273...423,634
JBrowse link
G KDM8 lysine demethylase 8 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:27,577,230...27,595,164 JBrowse link
G KMT2A lysine methyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,273,198...113,364,404
Ensembl chr11:117,204,820...117,290,100
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chr  X:43,999,576...44,098,848
Ensembl chr  X:51,984,080...51,992,850
JBrowse link
G MC3R melanocortin 3 receptor involved_in ISO (MGI:3821632|PMID:19036988) UniProt PMID:19036988 MGI:3821632 NCBI chr20:52,582,826...52,585,688 JBrowse link
G MTA1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chr14:86,058,412...86,111,736 JBrowse link
G MYBBP1A MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,593,741...4,610,203
Ensembl chr17:4,586,431...4,603,097
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,262,251...58,544,819
Ensembl chr13:77,306,509...77,586,843
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:98,227,071...98,262,254
Ensembl chr 7:110,952,876...110,981,967
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479
JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:3821398 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NGFR nerve growth factor receptor involved_in ISO (MGI:5503234|PMID:23785138) UniProt PMID:23785138 MGI:5503234 NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966
JBrowse link
G NOCT nocturnin involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,174,055...26,176,689
Ensembl chr 1:27,230,362...27,232,942
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr21:1,565,149...1,801,358
Ensembl chr21:15,065,197...15,068,673
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6382639|PMID:31875550) UniProt PMID:31875550 MGI:6382639 NCBI chr 5:98,903,740...98,917,763
Ensembl chr 5:104,601,373...104,617,925
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr  X:141,180,256...141,255,777
Ensembl chr  X:151,137,752...151,213,277
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G PER2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:6,547,667...6,607,905
Ensembl chr 1:7,795,552...7,855,922
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,288,158...108,311,128
Ensembl chr12:111,681,611...111,705,658
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO (MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:3630244 NCBI chr 4:42,987,217...43,114,993
Ensembl chr 4:48,836,953...48,960,383
JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chr14:3,737,741...3,746,646
Ensembl chr14:21,836,984...21,846,018
JBrowse link
G RAI1 retinoic acid induced 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:33,484,543...33,614,608
Ensembl chr17:38,431,946...38,461,861
JBrowse link
G RBM4 RNA binding motif protein 4 acts_upstream_of_or_within ISO (MGI:3703208|PMID:17264215) MGI PMID:17264215 MGI:3703208 NCBI chr11:61,996,221...62,026,007
Ensembl chr11:65,298,404...65,349,183
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,022,622...62,035,570
Ensembl chr11:65,345,796...65,358,473
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,948,559...41,987,121
Ensembl chr19:50,554,864...50,590,223
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) UniProt PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:5603468|PMID:25083875) UniProt PMID:25083875 MGI:5603468 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126
JBrowse link
G TOP1 DNA topoisomerase I involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,368,606...37,464,649
Ensembl chr20:38,468,452...38,562,652
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr16:51,936,471...52,209,695
Ensembl chr16:72,635,666...72,808,360
JBrowse link
G ZPBP2 zona pellucida binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6364050|PMID:31560728) MGI
Ensembl
PMID:31560728 GO_REF:0000107 MGI:6364050 NCBI chr17:17,410,278...17,420,458
Ensembl chr17:17,630,126...17,639,771
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012) UniProt PMID:11395012 MGI:1935010 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
G RBM4 RNA binding motif protein 4 involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr11:61,996,221...62,026,007
Ensembl chr11:65,298,404...65,349,183
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr20:30,603,701...30,626,835
Ensembl chr20:31,738,007...31,760,803
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6316762|PMID:30498428) MGI
Ensembl
PMID:30498428 GO_REF:0000107 MGI:6316762 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818
JBrowse link
G NLGN3 neuroligin 3 ISO RGD PMID:28958035 RGD:126790492 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:54,722,279...54,835,963
Ensembl chr 6:56,327,340...56,469,901
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5436392|PMID:22678064) Ensembl
MGI
PMID:22678064 GO_REF:0000107 MGI:5436392 NCBI chr 6:37,733,575...38,211,857
Ensembl chr 6:38,928,879...39,358,424
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:2445919 NCBI chr15:3,129,481...3,357,495
Ensembl chr15:23,981,359...24,058,357
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,695,394...55,761,307
Ensembl chr18:59,034,770...59,075,044
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO (MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:2445865 NCBI chr10:64,714,546...64,716,341 JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chr11:58,261,476...58,274,685
Ensembl chr11:61,614,818...61,616,200
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:3838062 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4420841|PMID:20080691) MGI
Ensembl
PMID:20080691 GO_REF:0000107 MGI:4420841 NCBI chr18:56,084,851...56,338,551 JBrowse link
G SOX14 SRY-box transcription factor 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5440343|PMID:22920256) MGI
Ensembl
PMID:22920256 GO_REF:0000107 MGI:5440343 NCBI chr 3:134,792,491...134,794,370
Ensembl chr 3:142,245,082...142,245,804
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chr10:64,714,546...64,716,341 JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,123,375...18,221,832
Ensembl chr19:19,131,484...19,228,980
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,219,260...58,244,780
Ensembl chr13:77,266,496...77,283,651
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G LOC100972235 putative F-box/LRR-repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chr 5:131,321,680...131,342,838 JBrowse link
G MTA1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chr14:86,058,412...86,111,736 JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chr19:16,719,444...16,733,006 JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143
JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
JBrowse link
G PDE6B phosphodiesterase 6B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 4:646,516...701,680 JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G PER2 period circadian regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:6,547,667...6,607,905
Ensembl chr 1:7,795,552...7,855,922
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,288,158...108,311,128
Ensembl chr12:111,681,611...111,705,658
JBrowse link
G RBM4 RNA binding motif protein 4 involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr11:61,996,221...62,026,007
Ensembl chr11:65,298,404...65,349,183
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,022,622...62,035,570
Ensembl chr11:65,345,796...65,358,473
JBrowse link
G SIK1 salt inducible kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,675,040...29,689,408
Ensembl chr21:42,975,920...42,987,948
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5642309|PMID:26131556) MGI
Ensembl
PMID:26131556 GO_REF:0000107 MGI:5642309 NCBI chr17:50,232,065...50,592,044
Ensembl chr17:55,166,165...55,449,215
JBrowse link
G CIART circadian associated repressor of transcription involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:125,627,812...125,632,367
Ensembl chr 1:129,278,742...129,283,271
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818
JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,277,018...112,751,896
Ensembl chr 7:124,966,816...125,437,430
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:3654773 NCBI chr10:73,391,297...74,158,488
Ensembl chr10:76,062,047...76,820,644
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 4:78,326,129...78,756,794
Ensembl chr 4:89,059,579...89,392,196
JBrowse link
G MC3R melanocortin 3 receptor involved_in ISO (MGI:3821632|PMID:19036988) UniProt PMID:19036988 MGI:3821632 NCBI chr20:52,582,826...52,585,688 JBrowse link
G MTA1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chr14:86,058,412...86,111,736 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3769195|PMID:17712420) MGI
Ensembl
PMID:17712420 GO_REF:0000107 MGI:3769195 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
JBrowse link
G NCOA2 nuclear receptor coactivator 2 involved_in ISO (MGI:5607392|PMID:24529706) UniProt PMID:24529706 MGI:5607392 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479
JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in ISO (MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:3821398 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NMS neuromedin S acts_upstream_of_or_within ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 Ensembl chr2A:101,451,548...101,462,229 JBrowse link
G NPAS2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:2667759 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) CACAO PMID:17706614 MGI:3759727 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIPC CLOCK interacting pacemaker involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr14:57,652,018...57,671,107
Ensembl chr14:76,854,661...76,873,509
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G PASD1 PAS domain containing repressor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:141,180,256...141,255,777
Ensembl chr  X:151,137,752...151,213,277
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:4410413|PMID:19605937) UniProt PMID:19605937 MGI:4410413 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,520,166...21,608,374
Ensembl chr 8:18,463,173...18,544,186
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chr 1:34,444,105...34,461,012
Ensembl chr 1:35,632,917...35,641,551
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:54,285,587...54,371,376
Ensembl chr15:73,881,500...73,966,506
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 1:178,728,751...178,769,066
Ensembl chr 1:183,023,466...183,063,760
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 1:178,728,751...178,769,066
Ensembl chr 1:183,023,466...183,063,760
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 1:64,772,612...64,881,886
Ensembl chr 1:66,693,926...66,764,768
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMAL1 basic helix-loop-helix ARNT like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376
JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:58,885,410...58,977,832
Ensembl chr12:61,503,973...61,596,580
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:97,958,527...98,159,550
Ensembl chr10:101,431,318...101,632,496
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:167,207,643...167,354,730
Ensembl chr 5:174,124,499...174,271,977
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr11:87,996,805...88,009,865
Ensembl chr11:91,491,822...91,504,652
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO (MGI:5574291|PMID:22356123) UniProt PMID:22356123 MGI:5574291
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) UniProt PMID:22753030 MGI:5504349 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418
JBrowse link
G CASP1 caspase 1 ISO RGD PMID:16455762 RGD:2315921 NCBI chr11:99,965,964...99,975,640
Ensembl chr11:103,448,497...103,458,149
Ensembl chr11:103,448,497...103,458,149
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861 PMID:20237285 RGD:10401262 RGD:2325188 NCBI chr20:33,573,001...33,583,699
Ensembl chr20:34,687,587...34,693,240
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr 7:31,582,134...31,592,914
Ensembl chr 7:31,696,914...31,712,200
JBrowse link
G GHRL ghrelin and obestatin prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170 PMID:22171046 RGD:9588660 RGD:9588665 NCBI chr11:87,996,805...88,009,865
Ensembl chr11:91,491,822...91,504,652
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 4:147,542,551...147,586,397
Ensembl chr 4:159,401,080...159,402,231
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr20:33,573,001...33,583,699
Ensembl chr20:34,687,587...34,693,240
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr12:99,783,925...99,785,292
Ensembl chr12:103,181,497...103,182,616
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 1:6,609,104...6,616,966
Ensembl chr 1:7,854,687...7,864,688
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:76,783,432...76,788,639
Ensembl chr17:82,592,312...82,593,702
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr22:5,233,876...5,248,622
Ensembl chr22:22,104,253...22,114,189
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr10:124,135,616...124,139,845
Ensembl chr10:128,384,897...128,388,217
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 1:6,609,104...6,616,966
Ensembl chr 1:7,854,687...7,864,688
JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr17:76,783,432...76,788,639
Ensembl chr17:82,592,312...82,593,702
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:46,289,042...46,436,839
Ensembl chr 7:46,354,640...46,492,549
JBrowse link
G ATG7 autophagy related 7 involved_in ISO (MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:6208175 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:97,958,527...98,159,550
Ensembl chr10:101,431,318...101,632,496
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,854,803...21,870,556
Ensembl chr 8:18,794,027...18,808,571
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:57,314,692...57,331,261
Ensembl chr10:59,647,993...59,664,434
JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G CSNK1D casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:76,648,677...76,683,054
Ensembl chr17:82,462,467...82,494,348
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,202,599...19,229,344
Ensembl chr22:37,027,094...37,072,942
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805
JBrowse link
G DRD4 dopamine receptor D4 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 NCBI chr11:640,401...646,775 JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,219,260...58,244,780
Ensembl chr13:77,266,496...77,283,651
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:6294161 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G HDAC3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:136,981,790...136,997,786
Ensembl chr 5:143,094,406...143,110,322
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,470,549...62,616,135
Ensembl chr11:65,793,464...65,930,498
JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 8:99,302,943...99,310,099
Ensembl chr 8:101,462,915...101,469,982
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) UniProt PMID:20300063 MGI:5508569 NCBI chr  X:43,999,576...44,098,848
Ensembl chr  X:51,984,080...51,992,850
JBrowse link
G MAGEL2 MAGE family member L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:6,017,523...6,021,849
Ensembl chr15:21,134,857...21,138,576
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 4:78,326,129...78,756,794
Ensembl chr 4:89,059,579...89,392,196
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G NOCT nocturnin involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G NONO non-POU domain containing octamer binding involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,547,277...60,564,845
Ensembl chr  X:70,602,456...70,619,956
JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) UniProt PMID:24048828 MGI:5518489 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:23,857,317...23,892,533
Ensembl chr 3:24,185,798...24,215,831
JBrowse link
G OPN4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143
JBrowse link
G PER1 period circadian regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250) UniProt PMID:11395012 PMID:19917250 MGI:1935010 MGI:4410390 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,288,158...108,311,128
Ensembl chr12:111,681,611...111,705,658
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:50,823,372...50,849,003
Ensembl chr19:59,672,097...59,695,977
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
JBrowse link
G PSPC1 paraspeckle component 1 involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chr13:1,001,131...1,106,627
Ensembl chr13:19,347,276...19,428,997
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:23172836)
(MGI:5567901|PMID:23172836)
UniProt PMID:23172836 MGI:5567901 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460
JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) UniProt PMID:22966205 MGI:5444785 NCBI chr 1:34,444,105...34,461,012
Ensembl chr 1:35,632,917...35,641,551
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:147,759,375...147,781,639
Ensembl chr 3:155,332,751...155,354,139
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:6443593|PMID:30782483) UniProt PMID:30782483 MGI:6443593 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:138,085,136...138,181,747
Ensembl chr 3:145,682,533...145,779,049
JBrowse link
G SRRD SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:6282940 NCBI chr22:7,545,779...7,559,431
Ensembl chr22:25,268,727...25,276,402
JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:6253084 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728
JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207
JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,494,029...4,595,415
Ensembl chr15:22,747,075...22,825,459
JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,825,332...7,895,095
Ensembl chr16:9,065,858...9,106,146
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,187,158...113,256,260
Ensembl chr 1:127,090,829...127,092,328
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (MGI:6874638|PMID:34798058) UniProt PMID:34798058 MGI:6874638 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:3575072 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G ADRB1 adrenoceptor beta 1 involved_in ISO (PMID:25083013)
(MGI:6368107|PMID:25083013)
UniProt PMID:25083013 MGI:6368107 NCBI chr10:110,642,491...110,646,595 JBrowse link
G CORT cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chr 1:9,210,186...9,212,201 JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr 5:127,496,951...127,499,325
Ensembl chr 5:133,660,775...133,663,146
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr 3:111,265,834...111,317,176
Ensembl chr 3:118,187,636...118,237,403
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:177,948,040...178,012,705 JBrowse link
G NMU neuromedin U involved_in ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr 4:68,299,538...68,340,680
Ensembl chr 4:74,867,364...74,904,965
JBrowse link
G PER3 period circadian regulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:6,547,667...6,607,905
Ensembl chr 1:7,795,552...7,855,922
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr19:43,033,080...43,037,726
Ensembl chr19:51,569,275...51,573,764
JBrowse link
G PTGDS prostaglandin D2 synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:108,037,994...108,042,136
Ensembl chr 9:137,006,601...137,009,680
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 involved_in ISO (PMID:11282968) UniProt PMID:11282968 NCBI chr 6:54,722,279...54,835,963
Ensembl chr 6:56,327,340...56,469,901
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 Ensembl chr20:62,004,176...62,017,866 JBrowse link
G ZFHX3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) UniProt PMID:26232227 MGI:5660827 NCBI chr16:51,936,471...52,209,695
Ensembl chr16:72,635,666...72,808,360
JBrowse link

Term paths to the root