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ONTOLOGY REPORT - ANNOTATIONS


Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Wikipedia:Circadian_rhythm



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circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in IEP
ISO
IBA
(PMID:12736803)
PMID:21873635
RGD PMID:12736803 PMID:18321474 PMID:21873635 PMID:16166080 RGD:2301031, RGD:13792537, RGD:2312676 NCBI chr10:101,827,072...101,831,805
Ensembl chr10:101,827,301...101,831,801
JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20668054 RGD:4890035 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Actb actin, beta IEP RGD PMID:9483199 RGD:11552588 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Adcy1 adenylate cyclase 1 IEP RGD PMID:8855334 RGD:1625750 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Adcy6 adenylate cyclase 6 IEP RGD PMID:16166080 RGD:2312676 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing IEP RGD PMID:21164040 RGD:5128545 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
JBrowse link
G Agrp agouti related neuropeptide IEP RGD PMID:21060311 RGD:8693680 NCBI chr19:33,447,992...33,523,068
Ensembl chr19:33,447,992...33,449,584
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in
acts_upstream_of_or_within
IEP
IBA
ISO
PMID:21873635
(MGI:6331398|PMID:31294688)
MGI:2180361 (MGI:1928563|PMID:11163178), (MGI:2179885|PMID:12024206), (MGI:2183702|PMID:12150932), (MGI:2667759|PMID:12843397), (MGI:2669067|PMID:12897057), (MGI:3703208|PMID:17264215), (PMID:14645221), (PMID:19217292), (PMID:19740747)
RGD PMID:11163178 PMID:12024206 PMID:12150932 PMID:12843397 PMID:12897057 More... MGI:1928563 MGI:2179885 MGI:2183702 MGI:2667759 MGI:2669067 MGI:3703208 MGI:6331398, RGD:67927, RGD:13792537, RGD:10043346 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 acts_upstream_of_or_within ISO (PMID:10864977) RGD PMID:10864977 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO
ISS
(PMID:28985504)
(MGI:6103563|PMID:28985504)
GO_REF:0000024
RGD
UniProt
PMID:28985504 GO_REF:0000024 MGI:6103563 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Atf4 activating transcription factor 4 acts_upstream_of_or_within ISO (PMID:21768648) RGD PMID:21768648 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atf5 activating transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:21768648)
Ensembl
RGD
PMID:21768648 GO_REF:0000107 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2159013 (MGI:2445865|PMID:12451142) RGD PMID:12451142 MGI:2445865 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Atp7b ATPase copper transporting beta IEP RGD PMID:9920665 RGD:1599396 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in
acts_upstream_of_or_within
ISO
IEP
ISS
(PMID:28797635)
PMID:12397359
(PMID:15038852), (PMID:19786558)
GO_REF:0000024
RGD
UniProt
PMID:15038852 PMID:19786558 PMID:28797635 PMID:12397359 GO_REF:0000024, RGD:625726 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in
acts_upstream_of_or_within
IEP
ISO
PMID:12397359
(PMID:15038852), (PMID:19786558)
RGD PMID:15038852 PMID:19786558 PMID:12397359 RGD:625726 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Cdk4 cyclin-dependent kinase 4 IEP RGD PMID:11598123 RGD:70761 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Cldn4 claudin 4 IEP RGD PMID:20091493 RGD:8693638 NCBI chr12:21,751,638...21,753,436
Ensembl chr12:21,751,331...21,753,436
JBrowse link
G Clock clock circadian regulator acts_upstream_of_or_within NAS
ISO
IEP
MGI:1861634 (MGI:2179885|PMID:12024206), (MGI:2669067|PMID:12897057), (MGI:66027|PMID:8171325), (PMID:14645221) RGD PMID:8171325 PMID:12024206 PMID:12897057 PMID:14645221 PMID:10095082 More... MGI:2179885 MGI:2669067 MGI:66027, RGD:632379, RGD:10401879 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in IEP
ISO
(MGI:5567906|PMID:20852621) RGD PMID:20852621 PMID:21367864 MGI:5567906, RGD:7247438 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Crem cAMP responsive element modulator acts_upstream_of_or_within ISO (PMID:23443664) RGD PMID:23443664 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Crx cone-rod homeobox IEP RGD PMID:9465110 RGD:1600977 NCBI chr 1:76,540,141...76,545,818
Ensembl chr 1:76,540,141...76,545,818
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2181205 (MGI:2179885|PMID:12024206), (MGI:2667759|PMID:12843397), (MGI:3703208|PMID:17264215), (PMID:23133559)
(MGI:6294193|PMID:29561690)
UniProt
RGD
PMID:12024206 PMID:12843397 PMID:17264215 PMID:23133559 PMID:29561690 GO_REF:0000024 MGI:2179885 MGI:2667759 MGI:3703208 MGI:6294193 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in
acts_upstream_of_or_within
IEP
ISO
ISS
(MGI:4461092|PMID:20123978), (MGI:6294193|PMID:29561690)
MGI:2181206 (MGI:2179885|PMID:12024206), (MGI:3703208|PMID:17264215)
GO_REF:0000024
RGD
UniProt
PMID:12024206 PMID:17264215 PMID:20123978 PMID:29561690 PMID:11804325 GO_REF:0000024 MGI:2179885 MGI:3703208 MGI:4461092 MGI:6294193, RGD:632584 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 IDA RGD PMID:12759897 RGD:1298869 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698
JBrowse link
G Dbp D-box binding PAR bZIP transcription factor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:96,175,796...96,180,745
Ensembl chr 1:96,175,440...96,180,745
JBrowse link
G Ddc dopa decarboxylase IEP RGD PMID:12047348 RGD:727571 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208
JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) RGD PMID:22767893 MGI:5430667 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) RGD PMID:22767893 MGI:5430667 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase IDA
IEP
RGD PMID:8504424 PMID:3202908 PMID:19628084 RGD:1599793, RGD:11251745, RGD:5133425 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982
JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:18778704 RGD:7175073 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISS
ISO
GO_REF:0000024
(MGI:4461092|PMID:20123978)
UniProt
RGD
PMID:20123978 GO_REF:0000024 MGI:4461092 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:12454858 RGD:2289959 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21363938 RGD:5131656 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (MGI:5559671|PMID:14645221) RGD PMID:14645221 MGI:5559671 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:12454858 RGD:2289959 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
JBrowse link
G F7 coagulation factor VII IEP RGD PMID:2607889 RGD:2312319 NCBI chr16:76,489,779...76,500,636
Ensembl chr16:76,489,717...76,500,610
JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:10987819 PMID:21367864 RGD:2293795, RGD:7247438 NCBI chr 6:24,297,898...24,319,157
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Gnrhr gonadotropin releasing hormone receptor involved_in IEP PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr14:21,856,871...21,874,861
Ensembl chr14:21,856,871...21,874,861
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:4461092|PMID:20123978)
UniProt
RGD
PMID:20123978 GO_REF:0000024 MGI:4461092 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hmgb1 high mobility group box 1 IEP RGD PMID:17226794 RGD:2316777 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IEP RGD PMID:15798208 RGD:9854643 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IEP RGD PMID:15798208 RGD:9854643 NCBI chr 5:148,542,999...148,574,888
Ensembl chr 5:148,543,044...148,574,867
JBrowse link
G Homer1 homer scaffold protein 1 IEP RGD PMID:15308308 RGD:2316907 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 IDA RGD PMID:12601002 RGD:1299550 NCBI chr 1:175,956,161...176,077,400
Ensembl chr 1:175,956,157...176,077,399
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (PMID:19217292) RGD PMID:19217292 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19217292), (PMID:19740747) RGD PMID:19217292 PMID:19740747 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein acts_upstream_of_or_within ISO (PMID:19217292) RGD PMID:19217292 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:19217292) RGD PMID:19217292 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO (PMID:20685873) RGD PMID:20685873 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO
ISS
(PMID:28985504)
GO_REF:0000024
RGD
UniProt
PMID:28985504 GO_REF:0000024 NCBI chr 8:109,256,705...109,261,365
Ensembl chr 8:109,256,728...109,261,359
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:10987819 RGD:2293795 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:10987819 RGD:2293795 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 IEP RGD PMID:17322986 RGD:2314391 NCBI chr 3:47,329,338...47,822,122
Ensembl chr 3:47,338,501...47,822,195
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3053849 (MGI:3654773|PMID:16845385) RGD PMID:16845385 MGI:3654773 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Klf10 Kruppel-like factor 10 acts_upstream_of_or_within ISO (PMID:20070857) RGD PMID:20070857 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
JBrowse link
G Klf9 Kruppel-like factor 9 involved_in IEA
ISO
GO_REF:0000107
(PMID:22711835)
Ensembl
RGD
PMID:22711835 GO_REF:0000107 NCBI chr 1:220,700,108...220,725,029
Ensembl chr 1:220,700,108...220,725,037
JBrowse link
G Lep leptin IEP RGD PMID:21164040 RGD:5128545 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 acts_upstream_of_or_within ISO (PMID:24353284) RGD PMID:24353284 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
G Lipc lipase C, hepatic type IEP plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Mat2a methionine adenosyltransferase 2A IDA RGD PMID:15504733 RGD:1598692 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493
JBrowse link
G Mettl3 methyltransferase-like 3 involved_in ISO (MGI:5527005|PMID:24209618) RGD PMID:24209618 MGI:5527005 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Mtnr1a melatonin receptor 1A involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:23895529 PMID:21873635 RGD:9686056, RGD:13792537 NCBI chr16:47,144,461...47,163,919
Ensembl chr16:47,144,461...47,163,919
JBrowse link
G Mttp microsomal triglyceride transfer protein acts_upstream_of_or_within ISO (PMID:24353284) RGD PMID:24353284 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase acts_upstream_of_or_within IEP
ISO
(PMID:19299583) RGD PMID:19299583 PMID:26547053 RGD:13781893 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 acts_upstream_of_or_within ISO (PMID:24529706) RGD PMID:24529706 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in ISO
ISS
(PMID:28985504)
GO_REF:0000024
RGD
UniProt
PMID:28985504 GO_REF:0000024 NCBI chr 4:159,659,242...159,688,034
Ensembl chr 4:159,659,242...159,688,018
JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:12,280,499...12,295,728
Ensembl chr17:12,280,484...12,295,858
JBrowse link
G Ngf nerve growth factor acts_upstream_of_or_within ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Ngfr nerve growth factor receptor acts_upstream_of_or_within ISO (PMID:23785138) RGD PMID:23785138 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEP PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO (PMID:20685873), (PMID:22073225) RGD PMID:20685873 PMID:22073225 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IMP PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:22073225)
Ensembl
RGD
PMID:22073225 GO_REF:0000107 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO (PMID:14645221) RGD PMID:14645221 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in IBA
ISO
PMID:21873635
(PMID:28797635)
RGD PMID:28797635 PMID:21873635 RGD:13792537 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 acts_upstream_of_or_within IEP
ISO
(MGI:2183702|PMID:12150932), (PMID:14645221) RGD PMID:12150932 PMID:14645221 PMID:24144766 MGI:2183702, RGD:10448984 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP RGD PMID:16673181 RGD:4892105 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO (PMID:21628546) RGD PMID:21628546 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761
JBrowse link
G Nrxn1 neurexin 1 IEP RGD PMID:22662246 RGD:13207344 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23785138)
Ensembl
RGD
PMID:23785138 GO_REF:0000107 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
JBrowse link
G Pax4 paired box 4 IEP RGD PMID:19012751 RGD:2311636 NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 IEP RGD PMID:16375900 RGD:9999182 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236
JBrowse link
G Per1 period circadian regulator 1 acts_upstream_of_or_within
involved_in
IMP
ISO
IEP
(PMID:14645221), (PMID:15038852), (PMID:19740747), (PMID:20106950), (PMID:23133559), (PMID:23443664), (PMID:23785138)
PMID:15094047
RGD PMID:14645221 PMID:15038852 PMID:19740747 PMID:20106950 PMID:23133559 More... RGD:1299576, RGD:8554359, RGD:631234 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 acts_upstream_of_or_within
involved_in
IEP
ISO
(MGI:2667759|PMID:12843397), (PMID:14645221), (PMID:19217292), (PMID:19740747), (PMID:23785138)
PMID:15094047
RGD PMID:12843397 PMID:14645221 PMID:19217292 PMID:19740747 PMID:23785138 More... MGI:2667759, RGD:61691, RGD:8554359, RGD:10043346 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Per3 period circadian regulator 3 acts_upstream_of_or_within ISO (MGI:2667759|PMID:12843397) RGD PMID:12843397 MGI:2667759 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 IEP RGD PMID:10570941 RGD:633914 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977
JBrowse link
G Prf1 perforin 1 IMP RGD PMID:16309885 RGD:1599931 NCBI chr20:29,246,202...29,251,712
Ensembl chr20:29,246,202...29,251,701
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO MGI:2449704 (MGI:3630244|PMID:12725729) RGD PMID:12725729 MGI:3630244 NCBI chr14:10,559,882...10,668,479
Ensembl chr14:10,559,882...10,666,888
JBrowse link
G Prl prolactin IEP RGD PMID:17726143 RGD:1642564 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
JBrowse link
G Prok2 prokineticin 2 acts_upstream_of_or_within ISO (MGI:2179885|PMID:12024206) RGD PMID:12024206 MGI:2179885 NCBI chr 4:132,346,681...132,361,754
Ensembl chr 4:132,347,103...132,361,385
JBrowse link
G Prokr2 prokineticin receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:2179885|PMID:12024206)
PMID:21873635
Ensembl
RGD
PMID:12024206 PMID:21873635 GO_REF:0000107 MGI:2179885, RGD:13792537 NCBI chr 3:119,624,738...119,639,442
Ensembl chr 3:119,627,601...119,635,718
JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO (PMID:23723244) RGD PMID:23723244 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO
GO_REF:0000024
(MGI:3703208|PMID:17264215)
UniProt
RGD
PMID:17264215 GO_REF:0000024 MGI:3703208 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020
JBrowse link
G Rora RAR-related orphan receptor A IEP RGD PMID:15781226 RGD:2325957 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorb RAR-related orphan receptor B IEP RGD PMID:18321474 PMID:15781226 RGD:2301031, RGD:2325957 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
JBrowse link
G Rorc RAR-related orphan receptor C IEP RGD PMID:15781226 RGD:2325957 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:12742352 RGD:9585648 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403
JBrowse link
G Setx senataxin acts_upstream_of_or_within ISO (MGI:5430667|PMID:22767893) RGD PMID:22767893 MGI:5430667 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
JBrowse link
G Sftpa1 surfactant protein A1 IEP RGD PMID:12872443 RGD:4143473 NCBI chr16:17,008,180...17,011,686
Ensembl chr16:17,008,180...17,011,685
JBrowse link
G Sftpb surfactant protein B IEP RGD PMID:12872443 RGD:4143473 NCBI chr 4:104,359,303...104,368,439
Ensembl chr 4:104,359,396...104,368,436
JBrowse link
G Sftpc surfactant protein C IEP RGD PMID:12872443 RGD:4143473 NCBI chr15:45,596,565...45,599,615
Ensembl chr15:45,596,574...45,610,777
JBrowse link
G Sirt1 sirtuin 1 acts_upstream_of_or_within ISO (PMID:18662546) RGD PMID:18662546 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) IEP RGD PMID:21903759 RGD:10450532 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117
JBrowse link
G Slc6a4 solute carrier family 6 member 4 IMP RGD PMID:18482738 RGD:4889508 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link
G Slc9a3 solute carrier family 9 member A3 IEP RGD PMID:15780093 RGD:1581376 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of_or_within ISO (PMID:19786558) RGD PMID:19786558 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:19190255 RGD:4145635 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEP RGD PMID:15798208 RGD:9854643 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 acts_upstream_of_or_within ISO (PMID:24043798) RGD PMID:24043798 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Timeless timeless circadian regulator involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(PMID:10231394), (PMID:23418588)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10231394 PMID:23418588 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9483199 RGD:11552588 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO (PMID:22904072) RGD PMID:22904072 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:24051492) RGD PMID:24051492 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tph1 tryptophan hydroxylase 1 IEP RGD PMID:18705647 RGD:5686363 NCBI chr 1:97,157,375...97,178,415
Ensembl chr 1:97,157,409...97,178,344
JBrowse link
G Tph2 tryptophan hydroxylase 2 IEP RGD PMID:15194882 RGD:2317079 NCBI chr 7:50,685,694...50,789,424
Ensembl chr 7:50,685,694...50,789,424
JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:19628084 RGD:5133425 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4127237 (MGI:5436392|PMID:22678064)
RGD PMID:22678064 PMID:21873635 MGI:5436392, RGD:13792537 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960
JBrowse link
G Csnk1e casein kinase 1, epsilon IMP RGD PMID:17502429 RGD:10395242 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in ISO (MGI:5825412|PMID:27142930) RGD PMID:27142930 MGI:5825412 NCBI chr 5:160,550,703...160,566,432
Ensembl chr 5:160,550,713...160,566,432
JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in ISS
ISO
GO_REF:0000024
(MGI:5790765|PMID:26882873)
UniProt
RGD
PMID:26882873 GO_REF:0000024 MGI:5790765 NCBI chr 3:105,236,794...105,337,664
Ensembl chr 3:105,236,795...105,337,226
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:6157418|PMID:29723273)
UniProt
Ensembl
RGD
PMID:29723273 GO_REF:0000024 GO_REF:0000107 MGI:6157418 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:3693321 (MGI:4949943|PMID:21525287) RGD PMID:21525287 MGI:4949943 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613453|PMID:24051492)
UniProt
RGD
PMID:24051492 GO_REF:0000024 MGI:5613453 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607210|PMID:23213472)
UniProt
RGD
PMID:23213472 GO_REF:0000024 MGI:5607210 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase IEP RGD PMID:12675911 RGD:2291861 NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:4820700|PMID:20106950)
UniProt
RGD
PMID:20106950 GO_REF:0000024 MGI:4820700 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:3843127|PMID:19299583), (MGI:3843754|PMID:19141540), (MGI:4819446|PMID:20562852), (MGI:5437152|PMID:22611086), (MGI:5442460|PMID:22653727), (MGI:5553223|PMID:23525013), (MGI:5568140|PMID:24736997), (MGI:6331398|PMID:31294688)
(PMID:23229515), (PMID:24005054)
UniProt
RGD
PMID:19141540 PMID:19299583 PMID:20562852 PMID:22611086 PMID:22653727 More... GO_REF:0000024 MGI:3843127 MGI:3843754 MGI:4819446 MGI:5437152 MGI:5442460 MGI:5553223 MGI:5568140 MGI:6331398 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 involved_in ISO (PMID:10864977) RGD PMID:10864977 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5292598|PMID:21768648)
UniProt
RGD
PMID:21768648 GO_REF:0000024 MGI:5292598 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IBA
ISO
IEA
ISS
PMID:21873635
(MGI:3798698|PMID:18411297), (MGI:6282958|PMID:30012868)
GO_REF:0000107
GO_REF:0000024
(PMID:18411297)
RGD
Ensembl
UniProt
PMID:18411297 PMID:30012868 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3798698 MGI:6282958, RGD:13792537 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in IBA
ISO
PMID:21873635
(MGI:3798698|PMID:18411297)
RGD PMID:18411297 PMID:21873635 MGI:3798698, RGD:13792537 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Cartpt CART prepropeptide involved_in IDA PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713
JBrowse link
G Cavin3 caveolae associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5508702|PMID:23079727)
UniProt
RGD
PMID:23079727 GO_REF:0000024 MGI:5508702 NCBI chr 1:159,826,549...159,828,138
Ensembl chr 1:159,826,549...159,828,161
JBrowse link
G Ciart circadian associated repressor of transcription involved_in IBA
ISO
PMID:21873635
(MGI:5545849|PMID:24385426), (MGI:5568140|PMID:24736997)
RGD PMID:24385426 PMID:24736997 PMID:21873635 MGI:5545849 MGI:5568140, RGD:13792537 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313
JBrowse link
G Clock clock circadian regulator involved_in IBA
ISO
ISS
IEA
PMID:21873635
(PMID:10864977), (PMID:21980503), (PMID:23229515), (PMID:24005054), (PMID:28985504)
(MGI:2683983|PMID:14672706), (MGI:3794495|PMID:18316400), (MGI:3843127|PMID:19299583), (MGI:3843754|PMID:19141540), (MGI:4837055|PMID:20430893), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5442460|PMID:22653727), (MGI:5503234|PMID:23785138), (MGI:6282958|PMID:30012868)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:10864977 PMID:14672706 PMID:15147242 PMID:18316400 PMID:19141540 More... GO_REF:0000024 GO_REF:0000107 MGI:2683983 MGI:3794495 MGI:3843127 MGI:3843754 MGI:4837055 MGI:5292598 MGI:5297789 MGI:5442460 MGI:5503234 MGI:6282958, RGD:13792537 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (MGI:5494765|PMID:23443664) RGD PMID:23443664 MGI:5494765 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in IBA
ISO
ISS
PMID:21873635
UniProtKB:P97784 (MGI:3843127|PMID:19299583), (MGI:5302136|PMID:22170608), (MGI:5464222|PMID:23133559), (MGI:5490394|PMID:23616524), (MGI:5545849|PMID:24385426)
GO_REF:0000024
RGD
UniProt
PMID:19299583 PMID:22170608 PMID:23133559 PMID:23616524 PMID:24385426 More... GO_REF:0000024 MGI:3843127 MGI:5302136 MGI:5464222 MGI:5490394 MGI:5545849, RGD:13792537 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
UniProtKB:P97784 (MGI:3843127|PMID:19299583), (MGI:5302136|PMID:22170608), (MGI:5490394|PMID:23616524)
GO_REF:0000107
PMID:21873635
UniProt
RGD
Ensembl
PMID:19299583 PMID:22170608 PMID:23616524 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3843127 MGI:5302136 MGI:5490394, RGD:13792537 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO
GO_REF:0000024
(MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935)
UniProt
RGD
PMID:19414593 PMID:21930935 GO_REF:0000024 MGI:3849793 MGI:5294280 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614
JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO (MGI:5294280|PMID:21930935) RGD PMID:21930935 MGI:5294280 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2387895 (MGI:3625767|PMID:16606840) RGD PMID:16606840 MGI:3625767 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO MGI:1857159 (MGI:3611612|PMID:15878801) RGD PMID:15878801 MGI:3611612 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Egr1 early growth response 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6219065|PMID:26471974), (MGI:6258624|PMID:29138967)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26471974 PMID:29138967 GO_REF:0000024 GO_REF:0000107 MGI:6219065 MGI:6258624 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5495336|PMID:23395176)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23395176 GO_REF:0000024 GO_REF:0000107 MGI:5495336 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO
ISS
(MGI:5567917|PMID:15226430)
GO_REF:0000024
RGD
UniProt
PMID:15226430 GO_REF:0000024 MGI:5567917 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:5567917|PMID:15226430) RGD PMID:15226430 MGI:5567917 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac3 histone deacetylase 3 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1349717 (MGI:3821398|PMID:19037247)
(MGI:5882311|PMID:26776516)
UniProt
RGD
PMID:19037247 PMID:26776516 GO_REF:0000024 MGI:3821398 MGI:5882311 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hnf1b HNF1 homeobox B IDA RGD PMID:9545279 RGD:2312721 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:3794926|PMID:18332112) RGD PMID:18332112 MGI:3794926 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO
ISS
(PMID:20534529)
(MGI:4458969|PMID:20534529)
GO_REF:0000024
RGD
UniProt
PMID:20534529 GO_REF:0000024 MGI:4458969 NCBI chr  X:20,871,278...21,001,378
Ensembl chr  X:20,873,795...21,001,262
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:4420353|PMID:19740747)
PMID:21873635
UniProt
RGD
PMID:19740747 PMID:21873635 GO_REF:0000024 MGI:4420353, RGD:13792537 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) RGD PMID:26037310 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (MGI:5288521|PMID:21960634) RGD PMID:21960634 MGI:5288521 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6270295|PMID:30500822)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:30500822 GO_REF:0000024 GO_REF:0000107 MGI:6270295 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (MGI:5607228|PMID:21113167) RGD PMID:21113167 MGI:5607228 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO
ISS
(MGI:5607511|PMID:24353284)
GO_REF:0000024
RGD
UniProt
PMID:24353284 GO_REF:0000024 MGI:5607511 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
G Maged1 MAGE family member D1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5508569|PMID:20300063)
UniProt
RGD
PMID:20300063 GO_REF:0000024 MGI:5508569 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:3821632|PMID:19036988)
UniProt
RGD
PMID:19036988 GO_REF:0000024 MGI:3821632 NCBI chr 3:161,016,347...161,017,444
Ensembl chr 3:161,016,347...161,017,444
JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5582861|PMID:24089055)
UniProt
RGD
PMID:24089055 GO_REF:0000024 MGI:5582861 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISO
ISS
(MGI:5009503|PMID:19129230)
GO_REF:0000024
RGD
UniProt
PMID:19129230 GO_REF:0000024 MGI:5009503 NCBI chr10:57,056,913...57,067,263
Ensembl chr10:57,056,874...57,067,255
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in ISO (PMID:20534529)
(MGI:4458969|PMID:20534529)
RGD PMID:20534529 MGI:4458969 NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3843127|PMID:19299583)
GO_REF:0000104
UniProt
RGD
PMID:19299583 GO_REF:0000024 GO_REF:0000104 MGI:3843127 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5607392|PMID:24529706)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24529706 GO_REF:0000024 GO_REF:0000107 MGI:5607392 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO MGI:1343091 (MGI:3821398|PMID:19037247) RGD PMID:19037247 MGI:3821398 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5503234|PMID:23785138)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23785138 GO_REF:0000024 GO_REF:0000107 MGI:5503234 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(MGI:4837993|PMID:20685873)
UniProt
RGD
PMID:20685873 GO_REF:0000024 MGI:4837993 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IBA
ISO
PMID:21873635
(MGI:3794495|PMID:18316400), (MGI:5518489|PMID:24048828), (MGI:6282961|PMID:29163035)
RGD PMID:18316400 PMID:24048828 PMID:29163035 PMID:21873635 MGI:3794495 MGI:5518489 MGI:6282961, RGD:13792537 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6275703|PMID:25212631), (MGI:6282985|PMID:30555544)
UniProt
RGD
PMID:25212631 PMID:30555544 GO_REF:0000024 MGI:6275703 MGI:6282985 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4429726|PMID:20159955)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20159955 GO_REF:0000024 GO_REF:0000107 MGI:4429726 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO
IBA
(PMID:21628546)
(MGI:5586794|PMID:21628546)
PMID:21873635
RGD PMID:21628546 PMID:21873635 MGI:5586794, RGD:13792537 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO (MGI:6382639|PMID:31875550) RGD PMID:31875550 MGI:6382639 NCBI chr 9:98,741,627...98,755,039
Ensembl chr 9:98,742,360...98,755,039
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5495336|PMID:23395176)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23395176 GO_REF:0000024 GO_REF:0000107 MGI:5495336 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:3578039|PMID:15888647), (MGI:4429726|PMID:20159955)
GO_REF:0000107
(PMID:18411297), (PMID:24005054)
PMID:21873635
UniProt
RGD
Ensembl
PMID:15888647 PMID:18411297 PMID:20159955 PMID:24005054 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3578039 MGI:4429726, RGD:13792537 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250), (MGI:4429726|PMID:20159955), (MGI:5319572|PMID:22504074)
PMID:21873635
UniProt
RGD
PMID:11395012 PMID:19917250 PMID:20159955 PMID:22504074 PMID:21873635 GO_REF:0000024 MGI:1935010 MGI:4410390 MGI:4429726 MGI:5319572, RGD:13792537 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Per3 period circadian regulator 3 involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:5314433 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:4429726|PMID:20159955)
UniProt
RGD
PMID:20159955 GO_REF:0000024 MGI:4429726 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:3715412|PMID:17476214)
UniProt
RGD
PMID:17476214 GO_REF:0000024 MGI:3715412 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:5294280|PMID:21930935)
UniProt
RGD
PMID:21930935 GO_REF:0000024 MGI:5294280 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(MGI:5294280|PMID:21930935)
UniProt
RGD
PMID:21930935 PMID:21873635 GO_REF:0000024 MGI:5294280, RGD:13792537 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5294280|PMID:21930935)
UniProt
RGD
PMID:21930935 GO_REF:0000024 MGI:5294280 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO MGI:2449704 (MGI:3630244|PMID:12725729) RGD PMID:12725729 MGI:3630244 NCBI chr14:10,559,882...10,668,479
Ensembl chr14:10,559,882...10,666,888
JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (MGI:5464222|PMID:23133559) RGD PMID:23133559 MGI:5464222 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
JBrowse link
G Rai1 retinoic acid induced 1 involved_in ISO
IBA
(PMID:22578325)
(MGI:5489969|PMID:22578325)
PMID:21873635
RGD PMID:22578325 PMID:21873635 MGI:5489969, RGD:13792537 NCBI chr10:44,913,231...45,008,232
Ensembl chr10:44,947,909...45,008,232
JBrowse link
G Rbm4 RNA binding motif protein 4 acts_upstream_of_or_within ISO (MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:3703208 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO
GO_REF:0000024
(MGI:3703208|PMID:17264215)
UniProt
RGD
PMID:17264215 GO_REF:0000024 MGI:3703208 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (MGI:5574290|PMID:22894897) RGD PMID:22894897 MGI:5574290 NCBI chr 1:79,257,738...79,285,490
Ensembl chr 1:79,257,725...79,285,507
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030), (MGI:5582866|PMID:23723244) RGD PMID:22753030 PMID:23723244 MGI:5504349 MGI:5582866 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18662546)
(MGI:3807721|PMID:18662546), (MGI:3843127|PMID:19299583)
RGD PMID:18662546 PMID:19299583 MGI:3807721 MGI:3843127 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA
(MGI:5603468|PMID:25083875)
GO_REF:0000107
RGD
Ensembl
PMID:25083875 GO_REF:0000107 MGI:5603468 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
G Top1 DNA topoisomerase I involved_in ISO
ISS
(PMID:22904072)
GO_REF:0000024
RGD
UniProt
PMID:22904072 GO_REF:0000024 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607210|PMID:23213472)
(MGI:5908516|PMID:26756164)
UniProt
RGD
PMID:23213472 PMID:26756164 GO_REF:0000024 MGI:5607210 MGI:5908516 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) RGD PMID:26232227 MGI:5660827 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO MGI:3762590 (MGI:6364050|PMID:31560728) RGD PMID:31560728 MGI:6364050 NCBI chr10:83,558,772...83,567,511
Ensembl chr10:83,559,016...83,567,508
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISS
ISO
GO_REF:0000024
(PMID:24423872)
UniProt
RGD
PMID:24423872 GO_REF:0000024 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:1935010|PMID:11395012)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11395012 GO_REF:0000024 GO_REF:0000107 MGI:1935010 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:1935010|PMID:11395012)
UniProt
RGD
PMID:11395012 GO_REF:0000024 MGI:1935010 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:3703208 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase IDA RGD PMID:8330191 RGD:1598901 NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:5750095 (MGI:6503588|PMID:32889171) RGD PMID:32889171 MGI:6503588 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Nlgn3 neuroligin 3 IMP RGD PMID:28958035 RGD:126790492 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO MGI:2180392 (MGI:2667759|PMID:12843397) RGD PMID:12843397 MGI:2667759 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:20980612 RGD:5128829 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:76,989,834...77,105,893
Ensembl chr 8:76,989,834...77,105,893
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO MGI:4127237 (MGI:5436392|PMID:22678064) RGD PMID:22678064 MGI:5436392 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960
JBrowse link
G Ghrh growth hormone releasing hormone IDA RGD PMID:17537840 RGD:2289986 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C IEP RGD PMID:17027151 RGD:2306498 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (MGI:2445919|PMID:12419540) RGD PMID:12419540 MGI:2445919 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha IEP RGD PMID:20844122 RGD:13515123 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP deprivation RGD PMID:12597996 RGD:4891963 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Star steroidogenic acute regulatory protein IEP deprivation RGD PMID:12597996 RGD:4891963 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO MGI:6501556 (MGI:6306193|PMID:30862682) RGD PMID:30862682 MGI:6306193 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6258624|PMID:29138967)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:29138967 GO_REF:0000024 GO_REF:0000107 MGI:6258624 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5527011|PMID:24162845)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24162845 GO_REF:0000024 GO_REF:0000107 MGI:5527011 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A involved_in ISO (MGI:4413614|PMID:19940926) RGD PMID:19940926 MGI:4413614 NCBI chr13:21,928,370...21,986,719
Ensembl chr13:21,928,408...21,986,695
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2159013 (MGI:2445865|PMID:12451142) RGD PMID:12451142 MGI:2445865 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:205,567,046...205,583,001
Ensembl chr 1:205,567,220...205,582,356
JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10095082 RGD:632379 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3838359 (MGI:3838062|PMID:19217292) RGD PMID:19217292 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4421807 (MGI:4420841|PMID:20080691)
Ensembl
RGD
PMID:20080691 GO_REF:0000107 MGI:4420841 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977
JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (MGI:5440343|PMID:22920256) RGD PMID:22920256 MGI:5440343 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:101,827,072...101,831,805
Ensembl chr10:101,827,301...101,831,801
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) RGD PMID:26392540 MGI:5699646 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IEA
ISO
GO_REF:0000107
(MGI:3798698|PMID:18411297)
Ensembl
RGD
PMID:18411297 GO_REF:0000107 MGI:3798698 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5532783|PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024 MGI:5532783 NCBI chr16:18,988,197...19,046,913
Ensembl chr16:18,988,250...19,043,381
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5490394|PMID:23616524)
PMID:21873635
UniProt
RGD
PMID:23616524 PMID:21873635 GO_REF:0000024 MGI:5490394, RGD:13792537 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:5490394|PMID:23616524)
PMID:21873635
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23616524 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5490394, RGD:13792537 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Fbxl12 F-box and leucine-rich repeat protein 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:19,175,864...19,183,373
Ensembl chr 8:19,160,352...19,183,607
JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 involved_in IBA
ISO
PMID:21873635
(MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856)
RGD PMID:23452855 PMID:23452856 PMID:21873635 MGI:5470183 MGI:5487698, RGD:13792537 NCBI chr17:8,060,412...8,077,415
Ensembl chr17:8,060,414...8,073,359
JBrowse link
G Fbxl22 F-box and leucine-rich repeat protein 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:67,069,998...67,076,685
Ensembl chr 8:67,069,998...67,076,685
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in IBA
ISO
PMID:21873635
(MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524)
RGD PMID:23452855 PMID:23452856 PMID:23616524 PMID:21873635 MGI:5470183 MGI:5487698 MGI:5490394, RGD:13792537 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867
JBrowse link
G Fbxl6 F-box and leucine-rich repeat protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:108,259,097...108,262,528
Ensembl chr 7:108,257,160...108,262,513
JBrowse link
G Fbxl8 F-box and leucine-rich repeat protein 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,142,653...33,147,268
Ensembl chr19:33,142,715...33,147,262
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3838062|PMID:19217292)
UniProt
RGD
PMID:19217292 GO_REF:0000024 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5582861|PMID:24089055)
UniProt
RGD
PMID:24089055 GO_REF:0000024 MGI:5582861 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574037 (MGI:3530176|PMID:15741322)
Ensembl
RGD
PMID:15741322 GO_REF:0000107 MGI:3530176 NCBI chr16:18,046,012...18,053,914
Ensembl chr16:18,046,013...18,053,459
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) RGD PMID:26392540 PMID:30240620 PMID:31607531 MGI:5699646 MGI:6376341 MGI:6378274 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (MGI:6378274|PMID:30240620) RGD PMID:30240620 MGI:6378274 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
JBrowse link
G Per1 period circadian regulator 1 involved_in IBA
ISO
ISS
IEA
PMID:21873635
(MGI:3578039|PMID:15888647)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15888647 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3578039, RGD:13792537 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Per3 period circadian regulator 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:5314433 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024 MGI:5086036 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024 MGI:5086036 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997)
UniProt
RGD
PMID:21712997 GO_REF:0000024 MGI:5086036 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (MGI:3703208|PMID:17264215) RGD PMID:17264215 MGI:3703208 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO
GO_REF:0000024
(MGI:3703208|PMID:17264215)
UniProt
RGD
PMID:17264215 GO_REF:0000024 MGI:3703208 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020
JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5532783|PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024 MGI:5532783 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
GO_REF:0000024
(MGI:5613453|PMID:24051492)
UniProt
RGD
PMID:24051492 GO_REF:0000024 MGI:5613453 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607210|PMID:23213472)
UniProt
RGD
PMID:23213472 GO_REF:0000024 MGI:5607210 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin-repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO MGI:2183465 (MGI:5642309|PMID:26131556) RGD PMID:26131556 MGI:5642309 NCBI chr10:74,214,143...74,602,825
Ensembl chr10:74,218,915...74,663,295
JBrowse link
G Ciart circadian associated repressor of transcription involved_in ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:5750095 (MGI:6503588|PMID:32889171) RGD PMID:32889171 MGI:6503588 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6258624|PMID:29138967)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:29138967 GO_REF:0000024 GO_REF:0000107 MGI:6258624 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3838062|PMID:19217292)
UniProt
RGD
PMID:19217292 GO_REF:0000024 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in ISO (MGI:5432624|PMID:22815518) RGD PMID:22815518 MGI:5432624 NCBI chr 4:49,775,812...50,277,746
Ensembl chr 4:49,776,246...50,277,728
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3053849 (MGI:3654773|PMID:16845385) RGD PMID:16845385 MGI:3654773 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G LOC259246 alpha-2u globulin PGCL1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr 5:75,142,157...75,564,845 JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024 MGI:5431019 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201
JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISS
ISO
GO_REF:0000024
(MGI:3821632|PMID:19036988)
UniProt
RGD
PMID:19036988 GO_REF:0000024 MGI:3821632 NCBI chr 3:161,016,347...161,017,444
Ensembl chr 3:161,016,347...161,017,444
JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5582861|PMID:24089055)
UniProt
RGD
PMID:24089055 GO_REF:0000024 MGI:5582861 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5607392|PMID:24529706)
Ensembl
RGD
PMID:24529706 GO_REF:0000107 MGI:5607392 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3821398|PMID:19037247)
UniProt
RGD
PMID:19037247 GO_REF:0000024 MGI:3821398 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G NMS neuromedin S acts_upstream_of_or_within IDA PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr 9:41,169,634...41,180,697
Ensembl chr 9:41,169,634...41,180,697
JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO MGI:2180392 (MGI:2667759|PMID:12843397) RGD PMID:12843397 MGI:2667759 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) RGD PMID:17706614 MGI:3759727 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607210|PMID:23213472)
UniProt
RGD
PMID:23213472 GO_REF:0000024 MGI:5607210 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK-interacting pacemaker involved_in ISO (MGI:5532917|PMID:17310242) RGD PMID:17310242 MGI:5532917 NCBI chr 6:106,595,011...106,613,732
Ensembl chr 6:106,595,105...106,613,723
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937), (MGI:5532917|PMID:17310242)
UniProt
RGD
PMID:17310242 PMID:19605937 GO_REF:0000024 MGI:4410413 MGI:5532917 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4410413|PMID:19605937)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19605937 GO_REF:0000024 GO_REF:0000107 MGI:4410413 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO (PMID:25936801) RGD PMID:25936801 NCBI chr  X:149,617,933...149,639,214
Ensembl chr  X:149,620,972...149,638,675
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937)
UniProt
RGD
PMID:19605937 GO_REF:0000024 MGI:4410413 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:28903391)
(MGI:6285118|PMID:28903391)
RGD PMID:28903391 MGI:6285118 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) RGD PMID:21680841 MGI:5014424 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:5014424|PMID:21680841) RGD PMID:21680841 MGI:5014424 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (MGI:5569417|PMID:24413057) RGD PMID:24413057 MGI:5569417 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP RGD PMID:19066225 RGD:5128864 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:19491711 RGD:2317916 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) RGD PMID:18329818 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IDA RGD PMID:18466985 RGD:6480669 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Drd1 dopamine receptor D1 IDA RGD PMID:12944496 RGD:1581422 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:12944496 RGD:1581422 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor IMP RGD PMID:16982424 RGD:10412019 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:4410413|PMID:19605937), (MGI:5442460|PMID:22653727)
(PMID:23229515)
UniProt
RGD
PMID:19605937 PMID:22653727 PMID:23229515 GO_REF:0000024 MGI:4410413 MGI:5442460 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 involved_in ISO (MGI:4410413|PMID:19605937)
(PMID:12738229)
RGD PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (MGI:4844267|PMID:18782782) RGD PMID:18782782 MGI:4844267 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA
(PMID:12738229), (PMID:23229515)
GO_REF:0000107
(MGI:5442460|PMID:22653727)
RGD
Ensembl
PMID:12738229 PMID:22653727 PMID:23229515 GO_REF:0000107 MGI:5442460 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (MGI:4844267|PMID:18782782) RGD PMID:18782782 MGI:4844267 NCBI chr10:17,232,735...17,330,584
Ensembl chr10:17,227,181...17,330,571
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:6331398|PMID:31294688)
UniProt
RGD
PMID:31294688 GO_REF:0000024 MGI:6331398 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Mtnr1b melatonin receptor 1B IDA RGD PMID:12643943 RGD:9588678 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5574291|PMID:22356123)
Ensembl
UniProt
RGD
PMID:22356123 GO_REF:0000024 GO_REF:0000107 MGI:5574291 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IDA RGD PMID:18946026 RGD:10448985 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:12930792 RGD:7777105 NCBI chr 1:228,409,883...229,638,794
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (MGI:5504349|PMID:22753030) RGD PMID:22753030 MGI:5504349 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24043798)
UniProt
RGD
PMID:24043798 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:14564007 RGD:734503 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin IDA RGD PMID:9748091 RGD:1625449 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836
JBrowse link
G Casp1 caspase 1 IMP RGD PMID:16455762 RGD:2315921 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:19889861 PMID:20237285 RGD:2325188, RGD:10401262 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Ghrhr growth hormone releasing hormone receptor IMP RGD PMID:20237285 RGD:10401262 NCBI chr 4:84,498,159...84,532,847
Ensembl chr 4:84,500,212...84,532,776
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO (PMID:18329818) RGD PMID:18329818 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Mtnr1b melatonin receptor 1B IDA
IMP
RGD PMID:19429170 PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:16378653 RGD:1642507 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) RGD PMID:15538933 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:12964948 RGD:1642489 NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:22,511,934...22,513,250
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) RGD PMID:26320947 MGI:5925970 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5492265|PMID:23716671)
UniProt
RGD
PMID:23716671 GO_REF:0000024 MGI:5492265 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nps neuropeptide S IDA RGD PMID:22300983 RGD:9831203 NCBI chr 1:190,077,040...190,080,821
Ensembl chr 1:190,077,040...190,080,821
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (MGI:5518489|PMID:24048828) RGD PMID:24048828 MGI:5518489 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Atg7 autophagy related 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6208175|PMID:29937374)
UniProt
RGD
PMID:29937374 GO_REF:0000024 MGI:6208175 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISS
ISO
GO_REF:0000024
(MGI:6282958|PMID:30012868)
UniProt
RGD
PMID:30012868 GO_REF:0000024 MGI:6282958 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) RGD PMID:15917222 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (MGI:5495335|PMID:23398316) RGD PMID:23398316 MGI:5495335 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636
JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISO
ISS
(PMID:27238018)
GO_REF:0000024
RGD
UniProt
PMID:27238018 GO_REF:0000024 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Clock clock circadian regulator involved_in ISS
ISO
GO_REF:0000024
(MGI:6282958|PMID:30012868)
UniProt
RGD
PMID:30012868 GO_REF:0000024 MGI:6282958 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:12409294 RGD:633667 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Crem cAMP responsive element modulator IEP RGD PMID:15936880 RGD:1582464 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q9R194 (MGI:1334825|PMID:10217146), (MGI:4366197|PMID:19833968), (MGI:4947326|PMID:21236481), (MGI:5490394|PMID:23616524), (MGI:5567898|PMID:23575670), (MGI:5908518|PMID:26431207)
UniProt
RGD
PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... GO_REF:0000024 MGI:1334825 MGI:4366197 MGI:4947326 MGI:5490394 MGI:5567898 MGI:5908518 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091
JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:P97784 (MGI:1334825|PMID:10217146), (MGI:5490394|PMID:23616524), (MGI:5567898|PMID:23575670)
UniProt
RGD
PMID:10217146 PMID:23575670 PMID:23616524 GO_REF:0000024 MGI:1334825 MGI:5490394 MGI:5567898 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965
JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3849793|PMID:19414593), (MGI:5294280|PMID:21930935)
PMID:21873635
UniProt
RGD
PMID:19414593 PMID:21930935 PMID:21873635 GO_REF:0000024 MGI:3849793 MGI:5294280, RGD:13792537 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614
JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO (MGI:5294280|PMID:21930935) RGD PMID:21930935 MGI:5294280 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5908518|PMID:26431207)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26431207 GO_REF:0000024 GO_REF:0000107 MGI:5908518 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Drd4 dopamine receptor D4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5518489|PMID:24048828)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24048828 GO_REF:0000024 GO_REF:0000107 MGI:5518489 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (PMID:16717091)
(MGI:3694308|PMID:16717091)
RGD PMID:16717091 MGI:3694308 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (PMID:17463251)
(MGI:3710694|PMID:17463252), (MGI:3715674|PMID:17462724), (MGI:5490394|PMID:23616524)
RGD PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 MGI:3710694 MGI:3715674 MGI:5490394 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6282935|PMID:27238018)
(PMID:27238018)
UniProt
RGD
PMID:27238018 GO_REF:0000024 MGI:6282935 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:6294161|PMID:28556462)
UniProt
RGD
PMID:28556462 GO_REF:0000024 MGI:6294161 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5882311|PMID:26776516)
UniProt
RGD
PMID:26776516 GO_REF:0000024 MGI:5882311 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in ISO
ISS
(PMID:30530698)
(MGI:6272229|PMID:30530698)
GO_REF:0000024
RGD
UniProt
PMID:30530698 GO_REF:0000024 MGI:6272229 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO
ISS
(PMID:24423872)
GO_REF:0000024
RGD
UniProt
PMID:24423872 GO_REF:0000024 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3838062|PMID:19217292)
UniProt
RGD
PMID:19217292 GO_REF:0000024 MGI:3838062 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:26037310) RGD PMID:26037310 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Klf10 Kruppel-like factor 10 involved_in IMP PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
JBrowse link
G Maged1 MAGE family member D1 involved_in ISO (MGI:5508569|PMID:20300063) RGD PMID:20300063 MGI:5508569 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364
JBrowse link
G Magel2 MAGE family member L2 involved_in ISO (MGI:5607219|PMID:22208286) RGD PMID:22208286 MGI:5607219 NCBI chr 1:115,880,137...115,884,680
Ensembl chr 1:115,880,474...115,884,250
JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024 MGI:5431019 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024 MGI:5431019 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5431019|PMID:22441692)
UniProt
RGD
PMID:22441692 GO_REF:0000024 MGI:5431019 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:6159528|PMID:29750810)
UniProt
RGD
PMID:29750810 GO_REF:0000024 MGI:6159528 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(MGI:5308514|PMID:22073225)
UniProt
RGD
PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISS
ISO
GO_REF:0000024
(MGI:5444785|PMID:22966205)
UniProt
RGD
PMID:22966205 GO_REF:0000024 MGI:5444785 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (MGI:5518489|PMID:24048828) RGD PMID:24048828 MGI:5518489 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IDA
ISO
PMID:22425774
(MGI:4360821|PMID:19721697), (MGI:4429726|PMID:20159955), (MGI:6162161|PMID:29533925)
RGD PMID:19721697 PMID:20159955 PMID:29533925 PMID:22425774 MGI:4360821 MGI:4429726 MGI:6162161, RGD:8553819 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5526909|PMID:23221024), (MGI:6162161|PMID:29533925)
UniProt
Ensembl
RGD
PMID:23221024 PMID:29533925 GO_REF:0000024 GO_REF:0000107 MGI:5526909 MGI:6162161 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Opn4 opsin 4 involved_in ISO
ISS
(MGI:2667269|PMID:12808468)
GO_REF:0000024
RGD
UniProt
PMID:12808468 GO_REF:0000024 MGI:2667269 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1935010|PMID:11395012)
UniProt
RGD
PMID:11395012 GO_REF:0000024 MGI:1935010 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:1935010|PMID:11395012), (MGI:4410390|PMID:19917250)
UniProt
RGD
PMID:11395012 PMID:19917250 GO_REF:0000024 MGI:1935010 MGI:4410390 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) RGD PMID:22274616 MGI:5314433 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:4429726|PMID:20159955)
UniProt
RGD
PMID:20159955 GO_REF:0000024 MGI:4429726 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:3830801|PMID:19041764)
UniProt
RGD
PMID:19041764 GO_REF:0000024 MGI:3830801 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:3715412|PMID:17476214)
UniProt
RGD
PMID:17476214 GO_REF:0000024 MGI:3715412 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO
ISS
(PMID:21712997)
(MGI:5086036|PMID:21712997), (MGI:5294280|PMID:21930935)
GO_REF:0000024
RGD
UniProt
PMID:21712997 PMID:21930935 GO_REF:0000024 MGI:5086036 MGI:5294280 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5086036|PMID:21712997), (MGI:5294280|PMID:21930935)
GO_REF:0000024
(PMID:21712997)
RGD
UniProt
PMID:21712997 PMID:21930935 PMID:21873635 GO_REF:0000024 MGI:5086036 MGI:5294280, RGD:13792537 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5086036|PMID:21712997), (MGI:5294280|PMID:21930935)
(PMID:21712997)
UniProt
RGD
PMID:21712997 PMID:21930935 GO_REF:0000024 MGI:5086036 MGI:5294280 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366197|PMID:19833968)
UniProt
RGD
PMID:19833968 GO_REF:0000024 MGI:4366197 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4366197|PMID:19833968)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19833968 GO_REF:0000024 GO_REF:0000107 MGI:4366197 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5467682|PMID:23185022)
UniProt
RGD
PMID:23185022 GO_REF:0000024 MGI:5467682 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (MGI:5554971|PMID:24158435) RGD PMID:24158435 MGI:5554971 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:23723244) RGD PMID:23723244 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5444785|PMID:22966205)
UniProt
RGD
PMID:22966205 GO_REF:0000024 MGI:5444785 NCBI chr15:30,828,617...30,911,315
Ensembl chr15:30,828,626...30,911,202
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5567901|PMID:23172836)
(PMID:23172836)
UniProt
RGD
PMID:23172836 GO_REF:0000024 MGI:5567901 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (MGI:5567901|PMID:23172836) RGD PMID:23172836 MGI:5567901 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rorb RAR-related orphan receptor B involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3712731|PMID:17303680)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17303680 GO_REF:0000024 GO_REF:0000107 MGI:3712731 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5444785|PMID:22966205) RGD PMID:22966205 MGI:5444785 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISO
ISS
(PMID:26392558)
(MGI:6241928|PMID:26392558)
GO_REF:0000024
RGD
UniProt
PMID:26392558 GO_REF:0000024 MGI:6241928 NCBI chr 2:142,913,924...142,931,752
Ensembl chr 2:142,914,003...142,931,950
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA
(MGI:6443593|PMID:30782483)
GO_REF:0000107
RGD
Ensembl
PMID:30782483 GO_REF:0000107 MGI:6443593 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) RGD PMID:26392558 NCBI chr 8:97,536,519...97,609,757
Ensembl chr 8:97,536,520...97,609,787
JBrowse link
G Srrd SRR1 domain containing involved_in ISO (MGI:6282940|PMID:28802827) RGD PMID:28802827 MGI:6282940 NCBI chr12:44,294,675...44,300,287
Ensembl chr12:44,294,271...44,300,287
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (MGI:6253084|PMID:27123980) RGD PMID:27123980 MGI:6253084 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Timeless timeless circadian regulator involved_in ISO
IEA
ISS
(PMID:23418588)
GO_REF:0000107
(MGI:5578016|PMID:23418588)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23418588 GO_REF:0000024 GO_REF:0000107 MGI:5578016 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5613450|PMID:24321095)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24321095 GO_REF:0000024 GO_REF:0000107 MGI:5613450 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:24728990)
(MGI:5607382|PMID:24728990)
RGD PMID:24728990 MGI:5607382 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6253084|PMID:27123980)
(PMID:27123980)
UniProt
RGD
PMID:27123980 GO_REF:0000024 MGI:6253084 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:29626158) RGD PMID:29626158 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6283959|PMID:30792350)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:30792350 GO_REF:0000024 GO_REF:0000107 MGI:6283959 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (MGI:3575072|PMID:15215293) RGD PMID:15215293 MGI:3575072 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Il18 interleukin 18 involved_in TAS PMID:11506998 UniProt PMID:11506998 RGD:8554500 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il6 interleukin 6 IMP RGD PMID:12667648 RGD:1358315 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO (MGI:3770734|PMID:17925011) RGD PMID:17925011 MGI:3770734 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (MGI:3575072|PMID:15215293) RGD PMID:15215293 MGI:3575072 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEP RGD PMID:11038259 RGD:631747 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6368107|PMID:25083013)
GO_REF:0000107
(PMID:25083013)
UniProt
RGD
Ensembl
PMID:25083013 GO_REF:0000024 GO_REF:0000107 MGI:6368107 NCBI chr 1:255,772,217...255,773,617
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Cort cortistatin IDA RGD PMID:8622767 RGD:727760 NCBI chr 5:159,560,591...159,562,032 JBrowse link
G Csf2 colony stimulating factor 2 IMP RGD PMID:12047622 RGD:10449529 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:15913875 RGD:1625069 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Nmu neuromedin U involved_in IDA PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192
JBrowse link
G Per3 period circadian regulator 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5300112|PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
UniProt
RGD
PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... GO_REF:0000024 MGI:5300112 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEP RGD PMID:11145837 RGD:724610 NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISS
ISO
PMID:10781097
(MGI:3687807|PMID:10781097)
RGD PMID:10781097 PMID:10781097 MGI:3687807, RGD:8553735 NCBI chr 3:8,281,899...8,284,833
Ensembl chr 3:8,281,899...8,284,833
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:11282968)
UniProt
RGD
PMID:11282968 GO_REF:0000024 NCBI chr 8:76,989,834...77,105,893
Ensembl chr 8:76,989,834...77,105,893
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:6159528|PMID:29750810)
UniProt
RGD
PMID:29750810 GO_REF:0000024 MGI:6159528 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 IMP RGD PMID:16310969 RGD:9835023 NCBI chr 3:168,831,934...168,839,920
Ensembl chr 3:168,834,003...168,839,920
JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (MGI:5660827|PMID:26232227) RGD PMID:26232227 MGI:5660827 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
JBrowse link

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