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ONTOLOGY REPORT - ANNOTATIONS

Term:circadian rhythm
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Accession:GO:0007623 term browser browse the term
Definition:Any biological process in an organism that recurs with a regularity of approximately 24 hours.
Synonyms:exact_synonym: circadian process
 related_synonym: circadian response;   response to circadian rhythm
 alt_id: GO:0050895
 xref: Reactome:R-HSA-400253 "Circadian Clock";   Wikipedia:Circadian_rhythm


show annotations for term's descendants           Sort by:
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in IEP
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:12736803) 		Ensembl
GO_Central
RGD		 PMID:12736803 PMID:18321474 PMID:16166080 GO_REF:0000033 GO_REF:0000107, RGD:2301031, RGD:2312676 NCBI chr10:102,323,647...102,330,639
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20668054 RGD:4890035 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Actb actin, beta IEP RGD PMID:9483199 RGD:11552588 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Adcy1 adenylate cyclase 1 IEP RGD PMID:8855334 RGD:1625750 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969 		JBrowse link
G Adcy6 adenylate cyclase 6 IEP RGD PMID:16166080 RGD:2312676 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754 		JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing IEP RGD PMID:21164040 RGD:5128545 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G Agrn agrin acts_upstream_of_or_within ISO MGI:88107 (PMID:22520507) RGD PMID:22520507 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003 		JBrowse link
G Agrp agouti related neuropeptide IEP RGD PMID:21060311 RGD:8693680 NCBI chr19:33,447,992...33,481,602
Ensembl chr19:33,447,992...33,449,584 		JBrowse link
G Ahr aryl hydrocarbon receptor IEP RGD PMID:9813174 RGD:405866391 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator IEP RGD PMID:9813174 RGD:405866391 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Arrb2 arrestin, beta 2 IEP RGD PMID:34919270 RGD:401938593 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO
IEA
ISS 		(PMID:28985504)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:28985504 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Atf4 activating transcription factor 4 involved_in ISO
IEA 		(PMID:21768648)
GO_REF:0000107 		RGD
Ensembl		 PMID:21768648 GO_REF:0000107 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Atf5 activating transcription factor 5 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21768648) 		Ensembl
RGD		 PMID:21768648 GO_REF:0000107 NCBI chr 1:104,432,094...104,437,611
Ensembl chr 1:95,295,610...95,299,707 		JBrowse link
G Atg7 autophagy related 7 IEP RGD PMID:32272782 RGD:407571700 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO
IEA 		MGI:2159013 (PMID:12451142)
GO_REF:0000107 		RGD
Ensembl		 PMID:12451142 GO_REF:0000107 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO MGI:87961 (PMID:22520507) RGD PMID:22520507 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G Atp7b ATPase copper transporting beta IEP RGD PMID:9920665 RGD:1599396 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636 		JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Becn1 beclin 1 IEP RGD PMID:32272782 RGD:407571700 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISO
IEA
IEP
ISS 		(PMID:28797635)
GO_REF:0000107
(PMID:19786558)
PMID:12397359
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:19786558 PMID:28797635 PMID:12397359 GO_REF:0000024 GO_REF:0000107, RGD:625726 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in IEP
IEA
ISO 		PMID:12397359
GO_REF:0000107
(PMID:19786558) 		Ensembl
RGD		 PMID:19786558 PMID:12397359 GO_REF:0000107, RGD:625726 NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in
acts_upstream_of_or_within 		IEP
ISO
IBA 		(PMID:14645221), (PMID:19217292), (PMID:19740747), (PMID:31294688)
MGI:2180361 (PMID:11163178), (PMID:12024206), (PMID:12150932), (PMID:12843397), (PMID:12897057), (PMID:17264215), (PMID:26945058)
GO_REF:0000033 		RGD
GO_Central		 PMID:11163178 PMID:12024206 PMID:12150932 PMID:12843397 PMID:12897057 More... GO_REF:0000033, RGD:67927, RGD:10043346 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 acts_upstream_of_or_within ISO
IEA 		(PMID:10864977)
GO_REF:0000107 		RGD
Ensembl		 PMID:10864977 GO_REF:0000107 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949 		JBrowse link
G Cartpt CART prepropeptide IEP RGD PMID:15138156 RGD:597830036 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Cdk4 cyclin-dependent kinase 4 IEP RGD PMID:11598123 RGD:70761 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:62,883,105...62,942,403 		JBrowse link
G Cldn4 claudin 4 IEP RGD PMID:20091493 RGD:8693638 NCBI chr12:21,751,638...21,753,436
Ensembl chr12:21,751,331...21,753,436 		JBrowse link
G Clock clock circadian regulator acts_upstream_of_or_within
involved_in 		NAS
IEA
ISO
IEP 		GO_REF:0000107
(PMID:14645221)
MGI:1861634 (PMID:12024206), (PMID:12897057), (PMID:8171325) 		Ensembl
RGD		 PMID:8171325 PMID:12024206 PMID:12897057 PMID:14645221 PMID:10095082 More... GO_REF:0000107, RGD:632379, RGD:10401879 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA 		MGI:2153356 (PMID:26945058)
GO_REF:0000107 		RGD
Ensembl		 PMID:26945058 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in IEP
IEA
ISO 		GO_REF:0000107
(PMID:20852621) 		Ensembl
RGD		 PMID:20852621 PMID:21367864 GO_REF:0000107, RGD:7247438 NCBI chr 9:73,397,333...73,466,339
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (PMID:23443664) RGD PMID:23443664 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989 		JBrowse link
G Crx cone-rod homeobox IEP RGD PMID:9465110 RGD:1600977 NCBI chr 1:76,539,812...76,553,694
Ensembl chr 1:76,540,141...76,545,818 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in
acts_upstream_of_or_within 		ISS
ISO 		GO_REF:0000024
(PMID:23133559), (PMID:29561690)
MGI:2181205 (PMID:12024206), (PMID:12843397), (PMID:17264215) 		UniProt
RGD		 PMID:12024206 PMID:12843397 PMID:17264215 PMID:23133559 PMID:29561690 GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 acts_upstream_of_or_within
involved_in 		IEP
IEA
ISO
ISS 		GO_REF:0000107
(PMID:20123978), (PMID:29561690)
MGI:2181206 (PMID:12024206), (PMID:17264215)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:12024206 PMID:17264215 PMID:20123978 PMID:29561690 PMID:11804325 GO_REF:0000024 GO_REF:0000107, RGD:632584 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 IDA RGD PMID:12759897 RGD:1298869 NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698 		JBrowse link
G Ddc dopa decarboxylase IEP RGD PMID:12047348 RGD:727571 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208 		JBrowse link
G Ddx5 DEAD-box helicase 5 acts_upstream_of_or_within ISO (PMID:22767893) RGD PMID:22767893 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Dhx9 DExH-box helicase 9 acts_upstream_of_or_within ISO (PMID:22767893) RGD PMID:22767893 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase IDA
IEP 		RGD PMID:8504424 PMID:3202908 PMID:19628084 RGD:1599793, RGD:11251745, RGD:5133425 NCBI chr 2:209,293,902...210,159,777
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:18778704 PMID:19482058 RGD:7175073, RGD:401960072 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:20123978)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:20123978 GO_REF:0000024 GO_REF:0000107 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:12454858 RGD:2289959 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21363938 RGD:5131656 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:14645221) RGD PMID:14645221 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:12454858 RGD:2289959 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525 		JBrowse link
G F7 coagulation factor VII IEP RGD PMID:2607889 RGD:2312319 NCBI chr16:76,489,775...76,500,636
Ensembl chr16:76,489,717...76,500,610 		JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP RGD PMID:10987819 PMID:21367864 RGD:2293795, RGD:7247438 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Gnrhr gonadotropin releasing hormone receptor involved_in IEP PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr14:21,856,871...21,874,861
Ensembl chr14:21,856,871...21,874,861 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO 		GO_REF:0000024
(PMID:20123978) 		UniProt
RGD		 PMID:20123978 GO_REF:0000024 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:24736997) RGD PMID:24736997 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hmgb1 high mobility group box 1 IEP RGD PMID:17226794 RGD:2316777 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IEP RGD PMID:15798208 RGD:9854643 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IEP RGD PMID:15798208 RGD:9854643 NCBI chr 5:148,542,999...148,574,888
Ensembl chr 5:148,543,044...148,574,867 		JBrowse link
G Homer1 homer scaffold protein 1 IEP RGD PMID:15308308 RGD:2316907 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785 		JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 IDA RGD PMID:12601002 RGD:1299550 NCBI chr 1:175,956,161...176,077,400
Ensembl chr 1:175,956,157...176,077,399 		JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626 		JBrowse link
G Id1 inhibitor of DNA binding 1 involved_in ISO
IEA 		(PMID:19217292)
GO_REF:0000107 		RGD
Ensembl		 PMID:19217292 GO_REF:0000107 NCBI chr 3:161,671,525...161,672,691
Ensembl chr 3:141,211,267...141,212,419 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:19217292), (PMID:19740747) RGD PMID:19217292 PMID:19740747 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in ISO (PMID:19217292) RGD PMID:19217292 NCBI chr 5:153,656,253...153,657,860
Ensembl chr 5:148,372,762...148,374,349 		JBrowse link
G Id4 inhibitor of DNA binding 4 involved_in ISO (PMID:19217292) RGD PMID:19217292 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO (PMID:20685873) RGD PMID:20685873 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO
ISS 		(PMID:28985504)
GO_REF:0000024 		RGD
UniProt		 PMID:28985504 GO_REF:0000024 NCBI chr 8:109,256,705...109,261,365
Ensembl chr 8:109,256,728...109,261,359 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:10987819 RGD:2293795 NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:10987819 RGD:2293795 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799 		JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 IEP RGD PMID:17322986 RGD:2314391 NCBI chr 3:47,329,338...47,822,122
Ensembl chr 3:47,338,501...47,822,195 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3053849 (PMID:16845385) RGD PMID:16845385 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in ISO (PMID:20070857) RGD PMID:20070857 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994 		JBrowse link
G Klf9 KLF transcription factor 9 involved_in IEA
ISO 		GO_REF:0000107
(PMID:22711835) 		Ensembl
RGD		 PMID:22711835 GO_REF:0000107 NCBI chr 1:220,700,108...220,725,110
Ensembl chr 1:220,700,108...220,725,037 		JBrowse link
G Lep leptin IEP RGD PMID:21164040 RGD:5128545 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO
IEA 		(PMID:24353284)
GO_REF:0000107 		RGD
Ensembl		 PMID:24353284 GO_REF:0000107 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
G Lipc lipase C, hepatic type IEP plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr 8:80,390,470...80,516,463
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Mat2a methionine adenosyltransferase 2A IDA RGD PMID:15504733 RGD:1598692 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24209618) RGD PMID:24209618 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Mtnr1a melatonin receptor 1A IEP RGD PMID:23895529 RGD:9686056 NCBI chr16:47,144,461...47,163,919
Ensembl chr16:47,144,461...47,163,919 		JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in ISO
IEA 		(PMID:24353284)
GO_REF:0000107 		RGD
Ensembl		 PMID:24353284 GO_REF:0000107 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in IEP
IEA
ISO 		GO_REF:0000107
(PMID:19299583) 		Ensembl
RGD		 PMID:19299583 PMID:26547053 GO_REF:0000107, RGD:13781893 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in ISO
IEA 		(PMID:24529706)
GO_REF:0000107 		RGD
Ensembl		 PMID:24529706 GO_REF:0000107 NCBI chr 5:10,618,712...10,852,776
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 involved_in ISO
IEA
ISS 		(PMID:28985504)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:28985504 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:159,659,242...159,688,034
Ensembl chr 4:159,659,242...159,688,018 		JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr17:12,432,376...12,447,605
Ensembl chr17:12,280,484...12,295,858 		JBrowse link
G Nfilz NFIL3 like basic leucine zipper involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:14,268,624...14,269,454
Ensembl chr 7:14,268,624...14,269,454 		JBrowse link
G Ngf nerve growth factor involved_in ISO (PMID:23785138) RGD PMID:23785138 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO
IEA 		(PMID:23785138)
GO_REF:0000107 		RGD
Ensembl		 PMID:23785138 GO_REF:0000107 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEP PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Noct nocturnin involved_in IEA
ISO 		GO_REF:0000002
GO_REF:0000107
(PMID:20685873), (PMID:22073225) 		InterPro
Ensembl
RGD		 PMID:20685873 PMID:22073225 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IMP PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (PMID:22073225) RGD PMID:22073225 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:14645221) RGD PMID:14645221 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISO
IEA
IBA 		(PMID:28797635)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:28797635 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 acts_upstream_of_or_within
involved_in 		IEP
IEA
ISO 		GO_REF:0000107
(PMID:14645221)
(PMID:12150932) 		Ensembl
RGD		 PMID:12150932 PMID:14645221 PMID:24144766 GO_REF:0000107, RGD:10448984 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP RGD PMID:16673181 RGD:4892105 NCBI chr18:31,522,783...31,644,508
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO (PMID:21628546) RGD PMID:21628546 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Nrxn1 neurexin 1 IEP RGD PMID:22662246 RGD:13207344 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISO
IEA 		(PMID:23785138)
GO_REF:0000107 		RGD
Ensembl		 PMID:23785138 GO_REF:0000107 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:23785138) 		Ensembl
RGD		 PMID:23785138 GO_REF:0000107 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO
IEA 		(PMID:23785138)
GO_REF:0000107 		RGD
Ensembl		 PMID:23785138 GO_REF:0000107 NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286 		JBrowse link
G Pax4 paired box 4 IEP RGD PMID:19012751 RGD:2311636 NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408 		JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 IEP RGD PMID:16375900 RGD:9999182 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236 		JBrowse link
G Per1 period circadian regulator 1 involved_in IMP
ISO
IEA
IEP 		(PMID:14645221), (PMID:19740747), (PMID:20106950), (PMID:23133559), (PMID:23443664), (PMID:23785138)
GO_REF:0000117
PMID:15094047 		RGD
UniProt		 PMID:14645221 PMID:19740747 PMID:20106950 PMID:23133559 PMID:23443664 More... GO_REF:0000117, RGD:1299576, RGD:8554359, RGD:631234 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in
acts_upstream_of_or_within 		IEP
ISO
IEA 		(PMID:14645221), (PMID:19217292), (PMID:19740747), (PMID:23785138)
GO_REF:0000117
(PMID:12843397)
PMID:15094047 		RGD
UniProt		 PMID:12843397 PMID:14645221 PMID:19217292 PMID:19740747 PMID:23785138 More... GO_REF:0000117, RGD:61691, RGD:8554359, RGD:10043346 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Per3 period circadian regulator 3 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:12843397)
GO_REF:0000117 		RGD
UniProt		 PMID:12843397 GO_REF:0000117 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 IEP RGD PMID:10570941 RGD:633914 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977 		JBrowse link
G Prf1 perforin 1 IMP RGD PMID:16309885 RGD:1599931 NCBI chr20:29,246,202...29,251,712
Ensembl chr20:29,246,202...29,251,701 		JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO MGI:2449704 (PMID:12725729) RGD PMID:12725729 NCBI chr14:10,559,882...10,668,479
Ensembl chr14:10,559,882...10,666,888 		JBrowse link
G Prl prolactin IEP RGD PMID:17726143 RGD:1642564 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062 		JBrowse link
G Prok2 prokineticin 2 acts_upstream_of_or_within ISO (PMID:12024206) RGD PMID:12024206 NCBI chr 4:132,346,681...132,361,754
Ensembl chr 4:132,347,103...132,361,385 		JBrowse link
G Prokr1 prokineticin receptor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,022,301...120,033,367
Ensembl chr 4:120,021,747...120,033,379 		JBrowse link
G Prokr2 prokineticin receptor 2 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:12024206) 		GO_Central
Ensembl
RGD		 PMID:12024206 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:119,624,738...119,639,442
Ensembl chr 3:119,627,601...119,635,718 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA 		(PMID:23723244)
GO_REF:0000107 		RGD
Ensembl		 PMID:23723244 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO 		GO_REF:0000024
(PMID:17264215) 		UniProt
RGD		 PMID:17264215 GO_REF:0000024 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020 		JBrowse link
G Rora RAR-related orphan receptor A IEP RGD PMID:15781226 RGD:2325957 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorb RAR-related orphan receptor B IEP RGD PMID:18321474 PMID:15781226 RGD:2301031, RGD:2325957 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Rorc RAR-related orphan receptor C IEP RGD PMID:15781226 RGD:2325957 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:12742352 RGD:9585648 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO MGI:2180183 (PMID:25101983) RGD PMID:25101983 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614 		JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in IEA
ISO 		GO_REF:0000107
MGI:3818305 (PMID:25101983) 		Ensembl
RGD		 PMID:25101983 GO_REF:0000107 NCBI chr 8:119,495,550...119,567,044
Ensembl chr 8:119,496,769...119,567,044 		JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 involved_in IEA
ISO 		GO_REF:0000107
MGI:3053097 (PMID:25101983) 		Ensembl
RGD		 PMID:25101983 GO_REF:0000107 NCBI chr 3:51,145,148...51,293,342
Ensembl chr 3:51,145,146...51,293,516 		JBrowse link
G Setx senataxin acts_upstream_of_or_within ISO
IEA 		(PMID:22767893)
GO_REF:0000107 		RGD
Ensembl		 PMID:22767893 GO_REF:0000107 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Sftpa1 surfactant protein A1 IEP RGD PMID:12872443 RGD:4143473 NCBI chr16:17,008,180...17,011,686
Ensembl chr16:17,008,180...17,011,685 		JBrowse link
G Sftpb surfactant protein B IEP RGD PMID:12872443 RGD:4143473 NCBI chr 4:104,359,303...104,368,439
Ensembl chr 4:104,359,396...104,368,436 		JBrowse link
G Sftpc surfactant protein C IEP RGD PMID:12872443 RGD:4143473 NCBI chr15:45,596,565...45,599,615
Ensembl chr15:45,596,574...45,610,777 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA 		(PMID:18662546)
GO_REF:0000107 		RGD
Ensembl		 PMID:18662546 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) IEP RGD PMID:21903759 RGD:10450532 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117 		JBrowse link
G Slc6a4 solute carrier family 6 member 4 IMP RGD PMID:18482738 RGD:4889508 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 IEP RGD PMID:15780093 RGD:1581376 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO
IEA 		(PMID:19786558)
GO_REF:0000107 		RGD
Ensembl		 PMID:19786558 GO_REF:0000107 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650 		JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:19190255 RGD:4145635 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:24413057) RGD PMID:24413057 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (PMID:24413057) RGD PMID:24413057 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:24413057) RGD PMID:24413057 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEP RGD PMID:15798208 RGD:9854643 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
IEA 		(PMID:24043798)
GO_REF:0000107 		RGD
Ensembl		 PMID:24043798 GO_REF:0000107 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Timeless timeless circadian regulator involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:10231394), (PMID:23418588)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:10231394 PMID:23418588 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9483199 RGD:11552588 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Top1 DNA topoisomerase I involved_in ISO
IEA 		(PMID:22904072)
GO_REF:0000107 		RGD
Ensembl		 PMID:22904072 GO_REF:0000107 NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA 		(PMID:24051492)
GO_REF:0000107 		RGD
Ensembl		 PMID:24051492 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tph1 tryptophan hydroxylase 1 IEP RGD PMID:18705647 RGD:5686363 NCBI chr 1:97,157,375...97,178,415
Ensembl chr 1:97,157,409...97,178,344 		JBrowse link
G Tph2 tryptophan hydroxylase 2 IEP RGD PMID:15194882 PMID:32532168 RGD:2317079, RGD:597830068 NCBI chr 7:50,685,694...50,789,424
Ensembl chr 7:50,685,694...50,789,424 		JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:19628084 RGD:5133425 NCBI chr 9:120,760,057...120,776,149
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:4127237 (PMID:22678064) 		GO_Central
Ensembl
RGD		 PMID:22678064 GO_REF:0000033 GO_REF:0000107 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960 		JBrowse link
G Csnk1e casein kinase 1, epsilon IMP RGD PMID:17502429 RGD:10395242 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Gpr157 G protein-coupled receptor 157 involved_in ISO
IEA 		(PMID:27142930)
GO_REF:0000107 		RGD
Ensembl		 PMID:27142930 GO_REF:0000107 NCBI chr 5:160,550,703...160,566,432
Ensembl chr 5:160,550,713...160,566,432 		JBrowse link
G Gpr176 G protein-coupled receptor 176 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:26882873) 		UniProt
Ensembl
RGD		 PMID:26882873 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:105,236,794...105,337,664
Ensembl chr 3:105,236,795...105,337,226 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:29723273)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:29723273 GO_REF:0000024 GO_REF:0000107 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO
IEA 		(PMID:38172607)
GO_REF:0000107 		RGD
Ensembl		 PMID:38172607 GO_REF:0000107 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:3693321 (PMID:21525287) RGD PMID:21525287 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24051492)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24051492 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23213472) 		UniProt
Ensembl
RGD		 PMID:23213472 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase IEP RGD PMID:12675911 RGD:2291861 NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISS
ISO 		GO_REF:0000024
(PMID:20106950) 		UniProt
RGD		 PMID:20106950 GO_REF:0000024 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21768648) 		UniProt
Ensembl
RGD		 PMID:21768648 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISO
IBA
IEA
ISS 		(PMID:18411297)
(PMID:18411297), (PMID:30012868)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
GO_Central
Ensembl
UniProt		 PMID:18411297 PMID:30012868 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in IEA
ISO
IBA 		GO_REF:0000107
(PMID:18411297)
GO_REF:0000033 		Ensembl
RGD
GO_Central		 PMID:18411297 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19141540), (PMID:19299583), (PMID:20562852), (PMID:22611086), (PMID:22653727), (PMID:23525013), (PMID:24736997), (PMID:31294688), (PMID:36977414)
GO_REF:0000107
(PMID:23229515), (PMID:24005054) 		UniProt
RGD
Ensembl		 PMID:19141540 PMID:19299583 PMID:20562852 PMID:22611086 PMID:22653727 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in ISO
IEA 		(PMID:10864977)
GO_REF:0000107 		RGD
Ensembl		 PMID:10864977 GO_REF:0000107 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949 		JBrowse link
G Cartpt CART prepropeptide involved_in IDA PMID:15680948 HGNC-UCL PMID:15680948 RGD:8553315 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Cavin3 caveolae associated protein 3 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23079727)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23079727 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:159,826,549...159,828,138
Ensembl chr 1:159,826,549...159,828,161 		JBrowse link
G Ciart circadian associated repressor of transcription involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:24385426), (PMID:24736997) 		GO_Central
Ensembl
InterPro
RGD		 PMID:24385426 PMID:24736997 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313 		JBrowse link
G Clock clock circadian regulator involved_in IEA
ISO
IBA
ISS 		GO_REF:0000107
(PMID:14672706), (PMID:15147242), (PMID:18316400), (PMID:19141540), (PMID:19299583), (PMID:20430893), (PMID:21768648), (PMID:22653727), (PMID:23785138), (PMID:30012868)
GO_REF:0000033
GO_REF:0000002
(PMID:10864977), (PMID:21980503), (PMID:23229515), (PMID:24005054), (PMID:28985504)
GO_REF:0000024 		Ensembl
RGD
GO_Central
InterPro
UniProt		 PMID:10864977 PMID:14672706 PMID:15147242 PMID:18316400 PMID:19141540 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Crem cAMP responsive element modulator involved_in ISO (PMID:23443664) RGD PMID:23443664 NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA 		GO_REF:0000024
UniProtKB:P97784 (PMID:19299583), (PMID:22170608), (PMID:23133559), (PMID:23616524), (PMID:24385426)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:19299583 PMID:22170608 PMID:23133559 PMID:23616524 PMID:24385426 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
UniProtKB:P97784 (PMID:19299583), (PMID:22170608), (PMID:23616524)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:19299583 PMID:22170608 PMID:23616524 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO 		GO_REF:0000024
(PMID:19414593), (PMID:21930935) 		UniProt
RGD		 PMID:19414593 PMID:21930935 GO_REF:0000024 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614 		JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO
IEA 		(PMID:21930935)
GO_REF:0000107 		RGD
Ensembl		 PMID:21930935 GO_REF:0000107 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO
IEA 		MGI:2387895 (PMID:16606840)
GO_REF:0000107 		RGD
Ensembl		 PMID:16606840 GO_REF:0000107 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO MGI:1857159 (PMID:15878801) RGD PMID:15878801 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596 		JBrowse link
G Egr1 early growth response 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:26471974), (PMID:29138967)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:26471974 PMID:29138967 GO_REF:0000024 GO_REF:0000107 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G ENSRNOG00000069573 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:21,845,052...21,894,772 JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:23395176) 		UniProt
RGD		 PMID:23395176 GO_REF:0000024 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:15226430) 		UniProt
RGD		 PMID:15226430 GO_REF:0000024 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:15226430) RGD PMID:15226430 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:26776516)
MGI:1349717 (PMID:19037247) 		UniProt
Ensembl
RGD		 PMID:19037247 PMID:26776516 GO_REF:0000024 GO_REF:0000107 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hnf1b HNF1 homeobox B IDA RGD PMID:9545279 RGD:2312721 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:18332112) RGD PMID:18332112 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO
ISS 		(PMID:20534529)
GO_REF:0000024 		RGD
UniProt		 PMID:20534529 GO_REF:0000024 NCBI chr  X:24,350,708...24,480,798
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19740747) 		UniProt
RGD		 PMID:19740747 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO
IEA 		(PMID:26037310)
GO_REF:0000107 		RGD
Ensembl		 PMID:26037310 GO_REF:0000107 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO
IEA 		(PMID:21960634)
GO_REF:0000107 		RGD
Ensembl		 PMID:21960634 GO_REF:0000107 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422 		JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:30500822)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:30500822 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841 		JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO
IEA 		(PMID:21113167)
GO_REF:0000107 		RGD
Ensembl		 PMID:21113167 GO_REF:0000107 NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24353284) 		UniProt
Ensembl
RGD		 PMID:24353284 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
G Maged1 MAGE family member D1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20300063) 		UniProt
Ensembl
RGD		 PMID:20300063 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364 		JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19036988) 		UniProt
Ensembl
RGD		 PMID:19036988 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:161,016,347...161,017,444
Ensembl chr 3:161,016,347...161,017,444 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:24089055) 		UniProt
RGD		 PMID:24089055 GO_REF:0000024 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19129230)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:19129230 GO_REF:0000024 GO_REF:0000107 NCBI chr10:57,056,897...57,067,258
Ensembl chr10:57,056,874...57,067,255 		JBrowse link
G Mycbp2 MYC binding protein 2 involved_in ISO
IEA 		(PMID:20534529)
GO_REF:0000107 		RGD
Ensembl		 PMID:20534529 GO_REF:0000107 NCBI chr15:86,352,061...86,590,126
Ensembl chr15:79,937,354...80,175,498 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19299583)
GO_REF:0000104 		UniProt
Ensembl
RGD		 PMID:19299583 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:24529706)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:24529706 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:10,618,712...10,852,776
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO MGI:1343091 (PMID:19037247) RGD PMID:19037247 NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ngfr nerve growth factor receptor involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:23785138)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:23785138 GO_REF:0000024 GO_REF:0000107 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518 		JBrowse link
G Noct nocturnin involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20685873) 		UniProt
Ensembl
RGD		 PMID:20685873 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000002
(PMID:18316400), (PMID:24048828), (PMID:29163035) 		GO_Central
InterPro
RGD		 PMID:18316400 PMID:24048828 PMID:29163035 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:25212631), (PMID:30555544) 		UniProt
Ensembl
RGD		 PMID:25212631 PMID:30555544 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:20159955)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:20159955 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO
IBA 		(PMID:21628546)
GO_REF:0000033 		RGD
GO_Central		 PMID:21628546 GO_REF:0000033 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO
IEA 		(PMID:31875550)
GO_REF:0000107 		RGD
Ensembl		 PMID:31875550 GO_REF:0000107 NCBI chr 9:98,741,627...98,755,039
Ensembl chr 9:98,742,360...98,755,039 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:23395176)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:23395176 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:149,617,933...149,639,214
Ensembl chr  X:149,620,972...149,638,675 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
IBA
ISO 		GO_REF:0000024
GO_REF:0000033
(PMID:15888647), (PMID:20159955)
(PMID:18411297), (PMID:24005054) 		UniProt
GO_Central
RGD		 PMID:15888647 PMID:18411297 PMID:20159955 PMID:24005054 GO_REF:0000024 GO_REF:0000033 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
IBA
ISO 		GO_REF:0000024
GO_REF:0000033
(PMID:11395012), (PMID:19917250), (PMID:20159955), (PMID:22504074) 		UniProt
GO_Central
RGD		 PMID:11395012 PMID:19917250 PMID:20159955 PMID:22504074 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Per3 period circadian regulator 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA 		(PMID:22274616)
GO_REF:0000107 		RGD
Ensembl		 PMID:22274616 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20159955) 		UniProt
Ensembl
RGD		 PMID:20159955 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO 		GO_REF:0000024
(PMID:17476214) 		UniProt
RGD		 PMID:17476214 GO_REF:0000024 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21930935) 		UniProt
Ensembl
RGD		 PMID:21930935 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:21930935)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21930935) 		UniProt
Ensembl
RGD		 PMID:21930935 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 acts_upstream_of_or_within ISO MGI:2449704 (PMID:12725729) RGD PMID:12725729 NCBI chr14:10,559,882...10,668,479
Ensembl chr14:10,559,882...10,666,888 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in ISO (PMID:23133559) RGD PMID:23133559 NCBI chr15:31,938,927...31,948,318
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Rai1 retinoic acid induced 1 involved_in ISO
IEA
IBA 		(PMID:22578325)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:22578325 GO_REF:0000033 GO_REF:0000107 NCBI chr10:44,913,231...45,008,232
Ensembl chr10:44,947,909...45,008,232 		JBrowse link
G Rbm14 RNA binding motif protein 14 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Rbm4 RNA binding motif protein 4 acts_upstream_of_or_within ISO (PMID:17264215) RGD PMID:17264215 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO 		GO_REF:0000024
(PMID:17264215) 		UniProt
RGD		 PMID:17264215 GO_REF:0000024 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO
IEA 		(PMID:22894897)
GO_REF:0000107 		RGD
Ensembl		 PMID:22894897 GO_REF:0000107 NCBI chr 1:79,257,738...79,285,490
Ensembl chr 1:79,257,725...79,285,507 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO
IEA 		(PMID:22753030)
GO_REF:0000107 		RGD
Ensembl		 PMID:22753030 GO_REF:0000107 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (PMID:22753030), (PMID:23723244) RGD PMID:22753030 PMID:23723244 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA 		(PMID:18662546)
GO_REF:0000107
(PMID:18662546), (PMID:19299583) 		RGD
Ensembl		 PMID:18662546 PMID:19299583 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA 		(PMID:25083875)
GO_REF:0000107 		RGD
Ensembl		 PMID:25083875 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Top1 DNA topoisomerase I involved_in ISO
IEA
ISS 		(PMID:22904072)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:22904072 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23213472)
(PMID:26756164) 		UniProt
Ensembl
RGD		 PMID:23213472 PMID:26756164 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) RGD PMID:26232227 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771 		JBrowse link
G Zpbp2 zona pellucida binding protein 2 acts_upstream_of_or_within ISO
IEA 		MGI:3762590 (PMID:31560728)
GO_REF:0000107 		RGD
Ensembl		 PMID:31560728 GO_REF:0000107 NCBI chr10:83,558,772...83,567,511
Ensembl chr10:83,559,016...83,567,508 		JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24423872) 		UniProt
Ensembl
RGD		 PMID:24423872 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:17264215) RGD PMID:17264215 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase IDA RGD PMID:8330191 RGD:1598901 NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO
IEA 		MGI:1856982 (PMID:30498428)
GO_REF:0000107 		RGD
Ensembl		 PMID:30498428 GO_REF:0000107 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:5750095 (PMID:32889171) RGD PMID:32889171 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Nlgn3 neuroligin 3 IMP RGD PMID:28958035 RGD:126790492 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO MGI:2180392 (PMID:12843397) RGD PMID:12843397 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:20980612 RGD:5128829 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:76,989,834...77,105,953
Ensembl chr 8:76,989,834...77,105,893 		JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO
IEA 		MGI:4127237 (PMID:22678064)
GO_REF:0000107 		RGD
Ensembl		 PMID:22678064 GO_REF:0000107 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960 		JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:12419540) RGD PMID:12419540 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961 		JBrowse link
circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pln phospholamban involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:38493225) 		UniProt
Ensembl
RGD		 PMID:38493225 GO_REF:0000024 GO_REF:0000107 NCBI chr20:32,629,537...32,639,559 JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO MGI:6501556 (PMID:30862682) RGD PMID:30862682 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISS
ISO 		GO_REF:0000107
GO_REF:0000024
(PMID:29138967) 		Ensembl
UniProt
RGD		 PMID:29138967 GO_REF:0000024 GO_REF:0000107 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24162845)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24162845 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A involved_in ISO
IEA 		(PMID:19940926)
GO_REF:0000107 		RGD
Ensembl		 PMID:19940926 GO_REF:0000107 NCBI chr13:21,928,370...21,986,719
Ensembl chr13:21,928,408...21,986,695 		JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO
IEA 		MGI:2159013 (PMID:12451142)
GO_REF:0000107 		RGD
Ensembl		 PMID:12451142 GO_REF:0000107 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:205,567,226...205,583,001
Ensembl chr 1:205,567,220...205,582,356 		JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10095082 RGD:632379 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3838359 (PMID:19217292) RGD PMID:19217292 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within ISO
IEA 		MGI:4421807 (PMID:20080691)
GO_REF:0000107 		RGD
Ensembl		 PMID:20080691 GO_REF:0000107 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO
IEA 		(PMID:22920256)
GO_REF:0000107 		RGD
Ensembl		 PMID:22920256 GO_REF:0000107 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918 		JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:102,323,647...102,330,639
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO
IEA 		(PMID:26392540)
GO_REF:0000107 		RGD
Ensembl		 PMID:26392540 GO_REF:0000107 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISO (PMID:18411297) RGD PMID:18411297 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23993098)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,988,197...19,046,914
Ensembl chr16:18,988,250...19,043,381 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:23616524)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:23616524)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:23452855), (PMID:23452856) 		GO_Central
Ensembl
RGD		 PMID:23452855 PMID:23452856 GO_REF:0000033 GO_REF:0000107 NCBI chr17:8,060,412...8,077,415
Ensembl chr17:8,060,414...8,073,359 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in IBA
ISO 		GO_REF:0000033
(PMID:23452855), (PMID:23452856), (PMID:23616524) 		GO_Central
RGD		 PMID:23452855 PMID:23452856 PMID:23616524 GO_REF:0000033 NCBI chr15:86,321,504...86,341,387
Ensembl chr15:79,906,795...79,927,867 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19217292) 		UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:24089055) 		UniProt
RGD		 PMID:24089055 GO_REF:0000024 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 acts_upstream_of_or_within ISO
IEA 		MGI:3574037 (PMID:15741322)
GO_REF:0000107 		RGD
Ensembl		 PMID:15741322 GO_REF:0000107 NCBI chr16:18,046,012...18,053,914
Ensembl chr16:18,046,013...18,053,459 		JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:26392540), (PMID:30240620), (PMID:31607531) RGD PMID:26392540 PMID:30240620 PMID:31607531 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO
IEA 		(PMID:30240620)
GO_REF:0000107 		RGD
Ensembl		 PMID:30240620 GO_REF:0000107 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
IBA
ISO 		GO_REF:0000024
GO_REF:0000033
(PMID:15888647) 		UniProt
GO_Central
RGD		 PMID:15888647 GO_REF:0000024 GO_REF:0000033 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Per3 period circadian regulator 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA 		(PMID:22274616)
GO_REF:0000107 		RGD
Ensembl		 PMID:22274616 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21712997) 		UniProt
Ensembl
RGD		 PMID:21712997 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO 		GO_REF:0000024
(PMID:21712997) 		UniProt
RGD		 PMID:21712997 GO_REF:0000024 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21712997) 		UniProt
Ensembl
RGD		 PMID:21712997 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:17264215) RGD PMID:17264215 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO 		GO_REF:0000024
(PMID:17264215) 		UniProt
RGD		 PMID:17264215 GO_REF:0000024 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020 		JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23993098)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991 		JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24051492)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24051492 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23213472) 		UniProt
Ensembl
RGD		 PMID:23213472 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin-repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO MGI:2183465 (PMID:26131556) RGD PMID:26131556 NCBI chr10:74,214,143...74,602,825
Ensembl chr10:74,218,915...74,663,295 		JBrowse link
G Ciart circadian associated repressor of transcription involved_in ISO
IEA 		(PMID:24736997)
GO_REF:0000107 		RGD
Ensembl		 PMID:24736997 GO_REF:0000107 NCBI chr 2:183,419,819...183,424,845
Ensembl chr 2:183,419,819...183,423,313 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:5750095 (PMID:32889171) RGD PMID:32889171 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:29138967)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:29138967 GO_REF:0000024 GO_REF:0000107 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19217292) 		UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:22815518) 		Ensembl
RGD		 PMID:22815518 GO_REF:0000107 NCBI chr 4:49,775,812...50,277,746
Ensembl chr 4:49,776,246...50,277,728 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO MGI:3053849 (PMID:16845385) RGD PMID:16845385 NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198 		JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO 		GO_REF:0000024
(PMID:22441692) 		UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201 		JBrowse link
G Mc3r melanocortin 3 receptor involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19036988) 		UniProt
Ensembl
RGD		 PMID:19036988 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:161,016,347...161,017,444
Ensembl chr 3:161,016,347...161,017,444 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:24089055) 		UniProt
RGD		 PMID:24089055 GO_REF:0000024 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mup4l1 major urinary protein 4 like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:75,221,340...75,224,797
Ensembl chr 5:75,142,157...75,564,845 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO
IEA 		MGI:1934018 (PMID:17712420)
GO_REF:0000107 		RGD
Ensembl		 PMID:17712420 GO_REF:0000107 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:24529706) 		Ensembl
RGD		 PMID:24529706 GO_REF:0000107 NCBI chr 5:10,618,712...10,852,776
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19037247) 		UniProt
RGD		 PMID:19037247 GO_REF:0000024 NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nms neuromedin S acts_upstream_of_or_within IDA PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr 9:41,169,634...41,180,697
Ensembl chr 9:41,169,634...41,180,697 		JBrowse link
G Npas2 neuronal PAS domain protein 2 acts_upstream_of_or_within ISO MGI:2180392 (PMID:12843397) RGD PMID:12843397 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Pln phospholamban involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:38493225) 		UniProt
Ensembl
RGD		 PMID:38493225 GO_REF:0000024 GO_REF:0000107 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:17706614) RGD PMID:17706614 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO
IEA 		(PMID:38172607)
GO_REF:0000107 		RGD
Ensembl		 PMID:38172607 GO_REF:0000107 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23213472) 		UniProt
Ensembl
RGD		 PMID:23213472 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK-interacting pacemaker involved_in ISO
IEA 		(PMID:17310242)
GO_REF:0000107
GO_REF:0000002 		RGD
Ensembl
InterPro		 PMID:17310242 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:106,595,011...106,613,732
Ensembl chr 6:106,595,105...106,613,723 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:17310242), (PMID:19605937) 		UniProt
RGD		 PMID:17310242 PMID:19605937 GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19605937) 		UniProt
Ensembl
RGD		 PMID:19605937 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO
IBA 		(PMID:25936801)
GO_REF:0000033 		RGD
GO_Central		 PMID:25936801 GO_REF:0000033 NCBI chr  X:149,617,933...149,639,214
Ensembl chr  X:149,620,972...149,638,675 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19605937) 		UniProt
RGD		 PMID:19605937 GO_REF:0000024 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:28903391) RGD PMID:28903391 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO
IEA 		(PMID:21680841)
GO_REF:0000107 		RGD
Ensembl		 PMID:21680841 GO_REF:0000107 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO
IEA 		(PMID:21680841)
GO_REF:0000107 		RGD
Ensembl		 PMID:21680841 GO_REF:0000107 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP RGD PMID:19066225 RGD:5128864 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:19491711 RGD:2317916 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO
IEA 		(PMID:18329818)
GO_REF:0000107 		RGD
Ensembl		 PMID:18329818 GO_REF:0000107 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Drd1 dopamine receptor D1 IDA RGD PMID:12944496 RGD:1581422 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:12944496 RGD:1581422 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor IMP RGD PMID:16982424 RGD:10412019 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19605937), (PMID:22653727)
GO_REF:0000107
(PMID:23229515) 		UniProt
RGD
Ensembl		 PMID:19605937 PMID:22653727 PMID:23229515 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in ISO
IEA 		(PMID:12738229)
GO_REF:0000107
(PMID:19605937) 		RGD
Ensembl		 PMID:12738229 PMID:19605937 GO_REF:0000107 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO
IEA 		(PMID:18782782)
GO_REF:0000107 		RGD
Ensembl		 PMID:18782782 GO_REF:0000107 NCBI chr 1:254,159,085...254,324,819
Ensembl chr 1:244,210,314...244,376,721 		JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA 		(PMID:12738229), (PMID:23229515)
(PMID:22653727)
GO_REF:0000107 		RGD
Ensembl		 PMID:12738229 PMID:22653727 PMID:23229515 GO_REF:0000107 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO
IEA 		(PMID:18782782)
GO_REF:0000107 		RGD
Ensembl		 PMID:18782782 GO_REF:0000107 NCBI chr10:17,737,181...17,834,834
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:31294688)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:31294688 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Mtnr1b melatonin receptor 1B IDA RGD PMID:12643943 RGD:9588678 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:22356123)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:22356123 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IDA RGD PMID:18946026 RGD:10448985 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:12930792 RGD:7777105 NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO
IEA 		(PMID:22753030)
GO_REF:0000107 		RGD
Ensembl		 PMID:22753030 GO_REF:0000107 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (PMID:22753030) RGD PMID:22753030 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24043798) 		UniProt
Ensembl
RGD		 PMID:24043798 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:14564007 RGD:734503 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin IDA RGD PMID:9748091 RGD:1625449 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836 		JBrowse link
G Casp1 caspase 1 IMP RGD PMID:16455762 RGD:2315921 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383 		JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:19889861 PMID:20237285 RGD:2325188, RGD:10401262 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor IMP RGD PMID:20237285 RGD:10401262 NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO
IEA 		(PMID:18329818)
GO_REF:0000107 		RGD
Ensembl		 PMID:18329818 GO_REF:0000107 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
G Mtnr1b melatonin receptor 1B IDA
IMP 		RGD PMID:19429170 PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:16378653 RGD:1642507 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) RGD PMID:15538933 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889 		JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:12964948 RGD:1642489 NCBI chr 7:22,511,934...22,513,250
Ensembl chr 7:22,511,934...22,513,250 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252 		JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:23716671) 		UniProt
RGD		 PMID:23716671 GO_REF:0000024 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nps neuropeptide S IDA RGD PMID:22300983 RGD:9831203 NCBI chr 1:190,077,040...190,080,821
Ensembl chr 1:190,077,040...190,080,821 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252 		JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (PMID:24048828) RGD PMID:24048828 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969 		JBrowse link
G Atg7 autophagy related 7 involved_in ISS
ISO 		GO_REF:0000024
(PMID:29937374) 		UniProt
RGD		 PMID:29937374 GO_REF:0000024 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISS
ISO 		GO_REF:0000024
(PMID:30012868) 		UniProt
RGD		 PMID:30012868 GO_REF:0000024 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO
IEA 		(PMID:15917222)
GO_REF:0000107 		RGD
Ensembl		 PMID:15917222 GO_REF:0000107 NCBI chr 1:254,159,085...254,324,819
Ensembl chr 1:244,210,314...244,376,721 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO
IEA 		(PMID:23398316)
GO_REF:0000107 		RGD
Ensembl		 PMID:23398316 GO_REF:0000107 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:27238018) 		UniProt
Ensembl
RGD		 PMID:27238018 GO_REF:0000024 GO_REF:0000107 NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Clock clock circadian regulator involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:30012868) 		UniProt
Ensembl
RGD		 PMID:30012868 GO_REF:0000024 GO_REF:0000107 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO 		GO_REF:0000024
UniProtKB:Q9R194 (PMID:10217146), (PMID:19833968), (PMID:21236481), (PMID:23575670), (PMID:23616524), (PMID:26431207) 		UniProt
RGD		 PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
UniProtKB:P97784 (PMID:10217146), (PMID:23575670), (PMID:23616524) 		UniProt
Ensembl
RGD		 PMID:10217146 PMID:23575670 PMID:23616524 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:19414593), (PMID:21930935)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:19414593 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614 		JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO
IEA 		(PMID:21930935)
GO_REF:0000107 		RGD
Ensembl		 PMID:21930935 GO_REF:0000107 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:26431207) 		UniProt
RGD		 PMID:26431207 GO_REF:0000024 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Drd4 dopamine receptor D4 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24048828)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24048828 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G ENSRNOG00000069573 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:21,845,052...21,894,772 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO
IEA 		(PMID:16717091)
GO_REF:0000107 		RGD
Ensembl		 PMID:16717091 GO_REF:0000107 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (PMID:17463251)
(PMID:17462724), (PMID:17463252), (PMID:23616524) 		RGD PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 NCBI chr15:86,321,504...86,341,387
Ensembl chr15:79,906,795...79,927,867 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:27238018) 		UniProt
Ensembl
RGD		 PMID:27238018 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO 		GO_REF:0000024
(PMID:28556462) 		UniProt
RGD		 PMID:28556462 GO_REF:0000024 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:26776516) 		UniProt
Ensembl
RGD		 PMID:26776516 GO_REF:0000024 GO_REF:0000107 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:30530698)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:30530698 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24423872) 		UniProt
Ensembl
RGD		 PMID:24423872 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19217292) 		UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO
IEA 		(PMID:26037310)
GO_REF:0000107 		RGD
Ensembl		 PMID:26037310 GO_REF:0000107 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in IMP PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994 		JBrowse link
G Maged1 MAGE family member D1 involved_in ISO
IEA 		(PMID:20300063)
GO_REF:0000107 		RGD
Ensembl		 PMID:20300063 GO_REF:0000107 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364 		JBrowse link
G Magel2 MAGE family member L2 involved_in ISO
IEA 		(PMID:22208286)
GO_REF:0000107 		RGD
Ensembl		 PMID:22208286 GO_REF:0000107 NCBI chr 1:125,292,033...125,296,575
Ensembl chr 1:115,880,474...115,884,250 		JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO 		GO_REF:0000024
(PMID:22441692) 		UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISS
ISO 		GO_REF:0000024
(PMID:22441692) 		UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22441692) 		UniProt
Ensembl
RGD		 PMID:22441692 GO_REF:0000024 GO_REF:0000107 NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:29750810) 		UniProt
Ensembl
RGD		 PMID:29750810 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Noct nocturnin involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22073225) 		UniProt
Ensembl
RGD		 PMID:22073225 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22966205) 		UniProt
Ensembl
RGD		 PMID:22966205 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:24048828) RGD PMID:24048828 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IDA
IEA
ISO 		PMID:22425774
GO_REF:0000107
(PMID:19721697), (PMID:20159955), (PMID:29533925) 		Ensembl
RGD		 PMID:19721697 PMID:20159955 PMID:29533925 PMID:22425774 GO_REF:0000107, RGD:8553819 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23221024), (PMID:29533925)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23221024 PMID:29533925 GO_REF:0000024 GO_REF:0000107 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553 		JBrowse link
G Opn4 opsin 4 involved_in ISS
ISO 		GO_REF:0000024
(PMID:12808468) 		UniProt
RGD		 PMID:12808468 GO_REF:0000024 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:11395012) 		UniProt
RGD		 PMID:11395012 GO_REF:0000024 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:11395012), (PMID:19917250) 		UniProt
RGD		 PMID:11395012 PMID:19917250 GO_REF:0000024 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA 		(PMID:22274616)
GO_REF:0000107 		RGD
Ensembl		 PMID:22274616 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20159955) 		UniProt
Ensembl
RGD		 PMID:20159955 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISS
ISO 		GO_REF:0000024
(PMID:19041764) 		UniProt
RGD		 PMID:19041764 GO_REF:0000024 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO 		GO_REF:0000024
(PMID:17476214) 		UniProt
RGD		 PMID:17476214 GO_REF:0000024 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21712997), (PMID:21930935) 		UniProt
Ensembl
RGD		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:21712997), (PMID:21930935)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:21712997), (PMID:21930935) 		UniProt
Ensembl
RGD		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19833968) 		UniProt
Ensembl
RGD		 PMID:19833968 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:19833968)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:19833968 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23185022) 		UniProt
Ensembl
RGD		 PMID:23185022 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO
IEA 		(PMID:24158435)
GO_REF:0000107 		RGD
Ensembl		 PMID:24158435 GO_REF:0000107 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA 		(PMID:23723244)
GO_REF:0000107 		RGD
Ensembl		 PMID:23723244 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22966205) 		UniProt
Ensembl
RGD		 PMID:22966205 GO_REF:0000024 GO_REF:0000107 NCBI chr15:30,828,617...30,911,315
Ensembl chr15:30,828,626...30,911,202 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:23172836) 		UniProt
RGD		 PMID:23172836 GO_REF:0000024 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO
IEA 		(PMID:23172836)
GO_REF:0000107 		RGD
Ensembl		 PMID:23172836 GO_REF:0000107 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:17303680) 		UniProt
Ensembl
RGD		 PMID:17303680 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO
IEA 		(PMID:22966205)
GO_REF:0000107 		RGD
Ensembl		 PMID:22966205 GO_REF:0000107 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:26392558) 		UniProt
Ensembl
RGD		 PMID:26392558 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:145,063,847...145,081,675
Ensembl chr 2:142,914,003...142,931,950 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA 		(PMID:30782483)
GO_REF:0000107 		RGD
Ensembl		 PMID:30782483 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) RGD PMID:26392558 NCBI chr 8:97,536,519...97,609,757
Ensembl chr 8:97,536,520...97,609,787 		JBrowse link
G Srrd SRR1 domain containing involved_in ISO (PMID:28802827) RGD PMID:28802827 NCBI chr12:44,294,675...44,300,287
Ensembl chr12:44,294,271...44,300,287 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO
IEA 		(PMID:27123980)
GO_REF:0000107 		RGD
Ensembl		 PMID:27123980 GO_REF:0000107 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Timeless timeless circadian regulator involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23418588)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23418588 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24321095)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24321095 GO_REF:0000024 GO_REF:0000107 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:24728990) RGD PMID:24728990 NCBI chr 1:119,204,244...119,297,097
Ensembl chr 1:110,070,480...110,157,250 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:27123980)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:27123980 GO_REF:0000024 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO
IEA 		(PMID:29626158)
GO_REF:0000107 		RGD
Ensembl		 PMID:29626158 GO_REF:0000107 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:30792350)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:30792350 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:15215293) RGD PMID:15215293 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Il18 interleukin 18 involved_in TAS PMID:11506998 UniProt PMID:11506998 RGD:8554500 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Il6 interleukin 6 IMP RGD PMID:12667648 RGD:1358315 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO
IEA 		(PMID:17925011)
GO_REF:0000107 		RGD
Ensembl		 PMID:17925011 GO_REF:0000107 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:34798058) 		UniProt
RGD		 PMID:34798058 GO_REF:0000024 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:15215293) RGD PMID:15215293 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEP RGD PMID:11038259 RGD:631747 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:25083013) 		UniProt
RGD		 PMID:25083013 GO_REF:0000024 NCBI chr 1:255,771,962...255,774,973
Ensembl chr 1:255,771,597...255,807,259 		JBrowse link
G Cort cortistatin IDA RGD PMID:8622767 RGD:727760 NCBI chr 5:159,560,591...159,562,032 JBrowse link
G Csf2 colony stimulating factor 2 IMP RGD PMID:12047622 RGD:10449529 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199 		JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:15913875 RGD:1625069 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:32893934) 		UniProt
RGD		 PMID:32893934 GO_REF:0000024 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Nmu neuromedin U involved_in IDA PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192 		JBrowse link
G Per3 period circadian regulator 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630) 		UniProt
RGD		 PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... GO_REF:0000024 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEP RGD PMID:11145837 RGD:724610 NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001 		JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISS
IEA
ISO 		PMID:10781097
GO_REF:0000107
(PMID:10781097) 		Ensembl
RGD		 PMID:10781097 PMID:10781097 GO_REF:0000107, RGD:8553735 NCBI chr 3:8,281,899...8,284,833
Ensembl chr 3:8,281,899...8,284,833 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Hcrtr2 hypocretin receptor 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:11282968) 		UniProt
RGD		 PMID:11282968 GO_REF:0000024 NCBI chr 8:76,989,834...77,105,953
Ensembl chr 8:76,989,834...77,105,893 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:29750810)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:29750810 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Oprl1 opioid related nociceptin receptor 1 IMP RGD PMID:16310969 RGD:9835023 NCBI chr 3:168,831,934...168,839,920
Ensembl chr 3:168,834,003...168,839,920 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) RGD PMID:26232227 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771 		JBrowse link
Term paths to the root