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ONTOLOGY REPORT - ANNOTATIONS

Term:visual perception
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Accession:GO:0007601 term browser browse the term
Definition:The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.
Synonyms:exact_synonym: sense of sight;   sensory visual perception;   vision
 xref: Wikipedia:Visual_perception


show annotations for term's descendants           Sort by:
visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 acts_upstream_of_or_within ISO MGI:1857860 (PMID:10412977) RGD PMID:10412977 NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3046273 (PMID:16775142)		 GO_Central
RGD		 PMID:16775142 GO_REF:0000033 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Arr3 arrestin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:65,699,881...65,712,224
Ensembl chr  X:65,698,699...65,712,153 		JBrowse link
G Arrb1 arrestin, beta 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061 		JBrowse link
G Atf6 activating transcription factor 6 involved_in ISO
IEA		 (PMID:26029869)
GO_REF:0000107		 RGD
Ensembl		 PMID:26029869 GO_REF:0000107 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within ISO (PMID:36125046), (PMID:36700052) RGD PMID:36125046 PMID:36700052 NCBI chr 7:46,751,028...46,754,132
Ensembl chr 7:46,750,993...46,754,141 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25541840)		 UniProt
RGD		 PMID:25541840 GO_REF:0000024 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bfsp2 beaded filament structural protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:104,006,226...104,063,399
Ensembl chr 8:104,006,226...104,063,399 		JBrowse link
G Cabp1 calcium binding protein 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:27822497)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:27822497 GO_REF:0000024 GO_REF:0000033 NCBI chr12:41,385,234...41,448,930
Ensembl chr12:41,378,897...41,448,927 		JBrowse link
G Cabp2 calcium binding protein 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:27822497)		 GO_Central
RGD		 PMID:27822497 GO_REF:0000033 NCBI chr 1:201,374,649...201,380,469
Ensembl chr 1:201,375,276...201,380,469 		JBrowse link
G Cabp4 calcium binding protein 4 involved_in ISO
IBA		 (PMID:16960802)
GO_REF:0000033		 RGD
GO_Central		 PMID:16960802 GO_REF:0000033 NCBI chr 1:201,428,671...201,442,950
Ensembl chr 1:201,428,672...201,433,172 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in
acts_upstream_of_or_within		 ISO (PMID:16505158), (PMID:9662399), (PMID:9662400)
MGI:3609549 (PMID:16155113)		 RGD PMID:9662399 PMID:9662400 PMID:16155113 PMID:16505158 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413 		JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429694 (PMID:11980879)		 Ensembl
RGD		 PMID:11980879 GO_REF:0000107 NCBI chr17:77,564,630...77,910,000
Ensembl chr17:77,564,460...77,909,106 		JBrowse link
G Cfh complement factor H involved_in
acts_upstream_of_or_within		 ISO (PMID:17921253)
(PMID:17517971), (PMID:25991857)		 RGD PMID:17517971 PMID:17921253 PMID:25991857 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:11344259), (PMID:15456819) RGD PMID:11344259 PMID:15456819 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Cldn19 claudin 19 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227 		JBrowse link
G Clic5 chloride intracellular channel 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Cln5 CLN5, intracellular trafficking protein acts_upstream_of_or_within ISO MGI:3521802 (PMID:15459177) RGD PMID:15459177 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438
Ensembl chr 2:79,893,548...79,903,438 		JBrowse link
G Cln6 CLN6, transmembrane ER protein acts_upstream_of_or_within ISO MGI:2159328 (PMID:9600738) RGD PMID:9600738 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO MGI:1856959 (PMID:7668363), (PMID:7683855), (PMID:8125718), (PMID:8282051) RGD PMID:7668363 PMID:7683855 PMID:8125718 PMID:8282051 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Clrn1 clarin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:38,711,726...38,750,942
Ensembl chr 9:38,711,710...38,750,942 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in ISO (PMID:10573014), (PMID:8872475) RGD PMID:8872475 PMID:10573014 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:17557158) RGD PMID:17557158 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO
IEA		 (PMID:10486316), (PMID:16752401)
GO_REF:0000107		 RGD
Ensembl		 PMID:10486316 PMID:16752401 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:12915475)
(PMID:15316081)		 RGD PMID:12915475 PMID:15316081 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Cryaa crystallin, alpha A involved_in ISO (PMID:14512969), (PMID:9467006) RGD PMID:9467006 PMID:14512969 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Cryba1 crystallin, beta A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:62,608,373...62,614,726
Ensembl chr10:62,608,383...62,614,726 		JBrowse link
G Cryba2 crystallin, beta A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,447,250...76,457,968
Ensembl chr 9:76,447,251...76,450,460 		JBrowse link
G Cryba4 crystallin, beta A4 involved_in ISO
IBA		 (PMID:16960806)
GO_REF:0000033		 RGD
GO_Central		 PMID:16960806 GO_REF:0000033 NCBI chr12:44,378,734...44,393,226
Ensembl chr12:44,378,737...44,393,221 		JBrowse link
G Crybb1 crystallin, beta B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:44,369,734...44,383,344
Ensembl chr12:44,369,735...44,383,344 		JBrowse link
G Crybb2 crystallin, beta B2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857342 (PMID:7363969)		 GO_Central
RGD		 PMID:7363969 GO_REF:0000033 NCBI chr12:43,569,747...43,579,671
Ensembl chr12:43,569,747...43,579,671 		JBrowse link
G Crybb3 crystallin, beta B3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:43,557,103...43,562,120
Ensembl chr12:43,557,103...43,562,120 		JBrowse link
G Crybg3 crystallin beta-gamma domain containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:40,749,198...40,861,753
Ensembl chr11:40,749,214...40,861,752 		JBrowse link
G Cryga crystallin, gamma A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:66,482,176...66,484,638
Ensembl chr 9:66,482,176...66,509,896 		JBrowse link
G Crygb crystallin, gamma B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520 		JBrowse link
G Crygc crystallin, gamma C involved_in IEA
ISO
IBA		 GO_REF:0000107
(PMID:12011157), (PMID:18618005)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:12011157 PMID:18618005 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:66,451,591...66,453,626
Ensembl chr 9:66,451,593...66,453,626 		JBrowse link
G Crygd crystallin, gamma D involved_in ISO
IBA		 (PMID:12011157), (PMID:12676897), (PMID:9927684)
GO_REF:0000033		 RGD
GO_Central		 PMID:9927684 PMID:12011157 PMID:12676897 GO_REF:0000033 NCBI chr 9:66,442,057...66,443,668
Ensembl chr 9:66,442,054...66,444,067 		JBrowse link
G Cryge crystallin, gamma E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:66,429,924...66,432,521
Ensembl chr 9:66,429,924...66,433,274 		JBrowse link
G Crygf crystallin, gamma F involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:67,448,265...67,450,429
Ensembl chr 9:67,447,954...67,450,429 		JBrowse link
G Crygn crystallin, gamma N involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:10,394,015...10,401,542
Ensembl chr 4:10,394,020...10,401,543 		JBrowse link
G Crygs crystallin, gamma S involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:78,207,170...78,212,273
Ensembl chr11:78,207,170...78,212,273 		JBrowse link
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 involved_in ISO (PMID:16055927) RGD PMID:16055927 NCBI chr 2:116,923,272...116,945,312
Ensembl chr 2:116,923,272...116,945,264 		JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25983245)		 UniProt
RGD		 PMID:25983245 GO_REF:0000024 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403 		JBrowse link
G Elfn1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:36179691) RGD PMID:36179691 NCBI chr12:14,660,049...14,725,709
Ensembl chr12:14,660,083...14,724,580 		JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861921 (PMID:15728559)		 Ensembl
RGD		 PMID:15728559 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho 2 acts_upstream_of_or_within ISO MGI:2446461 (PMID:12019334) RGD PMID:12019334 NCBI chr 5:47,445,280...47,489,929
Ensembl chr 5:47,452,150...47,489,809 		JBrowse link
G Gja3 gap junction protein, alpha 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:31,181,360...31,206,820
Ensembl chr15:31,181,369...31,206,810 		JBrowse link
G Gjc1 gap junction protein, gamma 1 acts_upstream_of_or_within ISO MGI:2386124 (PMID:15659592) RGD PMID:15659592 NCBI chr10:87,758,192...87,785,443
Ensembl chr10:87,760,528...87,785,867 		JBrowse link
G Gjd2 gap junction protein, delta 2 acts_upstream_of_or_within ISO MGI:2388389 (PMID:15659592) RGD PMID:15659592 NCBI chr 3:100,771,450...100,776,134
Ensembl chr 3:100,772,062...100,775,061 		JBrowse link
G Glra1 glycine receptor, alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3696673 (PMID:17114051)		 Ensembl
RGD		 PMID:17114051 GO_REF:0000107 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162 		JBrowse link
G Glrb glycine receptor, beta acts_upstream_of_or_within ISO MGI:1856363 (PMID:1338094) RGD PMID:1338094 NCBI chr 2:166,134,616...166,207,498
Ensembl chr 2:166,134,626...166,207,489 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:3707707|MGI:95779 (PMID:16603466), (PMID:30111842) RGD PMID:16603466 PMID:30111842 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845|MGI:5051274|MGI:95778 (PMID:17515894), (PMID:29518352), (PMID:30111842) RGD PMID:17515894 PMID:29518352 PMID:30111842 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:17,162,500...17,212,283
Ensembl chr 4:17,162,490...17,212,283 		JBrowse link
G Gpr179 G protein-coupled receptor 179 involved_in ISO (PMID:22325362)
(PMID:24114537), (PMID:33922602)		 RGD PMID:22325362 PMID:24114537 PMID:33922602 NCBI chr10:82,324,568...82,340,448
Ensembl chr10:82,337,771...82,340,448 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
G Guca1a guanylate cyclase activator 1A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2664159 (PMID:11493703), (PMID:15173221)		 GO_Central
RGD		 PMID:11493703 PMID:15173221 GO_REF:0000033 NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
G Guca1b guanylate cyclase activator 1B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2664160 (PMID:11493703), (PMID:15173221)		 GO_Central
RGD		 PMID:11493703 PMID:15173221 GO_REF:0000033 NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455 		JBrowse link
G Gucy2e guanylate cyclase 2E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382 		JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2182467 (PMID:10908613), (PMID:15359216)		 Ensembl
RGD		 PMID:10908613 PMID:15359216 GO_REF:0000107 NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461 		JBrowse link
G Kcnk9 potassium two pore domain channel subfamily K member 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36070380)		 UniProt
RGD		 PMID:36070380 GO_REF:0000024 NCBI chr 7:104,429,186...104,473,924
Ensembl chr 7:104,437,934...104,473,175 		JBrowse link
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1344394 (PMID:19907020)		 Ensembl
RGD		 PMID:19907020 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO MGI:99916 (PMID:19907020) RGD PMID:19907020 NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619 		JBrowse link
G Lrit1 leucine-rich repeat, Ig-like and transmembrane domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:12,822,076...12,830,003
Ensembl chr16:12,822,076...12,831,772 		JBrowse link
G Lrit3 leucine-rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within ISO MGI:5629558 (PMID:24598786) RGD PMID:24598786 NCBI chr 2:218,337,215...218,360,318
Ensembl chr 2:218,337,819...218,357,307 		JBrowse link
G Mfrp membrane frizzled-related protein acts_upstream_of_or_within ISO MGI:1888705 (PMID:12140190) RGD PMID:12140190 NCBI chr 8:44,445,636...44,450,859
Ensembl chr 8:44,445,697...44,450,859 		JBrowse link
G Mip major intrinsic protein of lens fiber acts_upstream_of_or_within ISO MGI:1861978 (PMID:11773604) RGD PMID:11773604 NCBI chr 7:643,502...653,121
Ensembl chr 7:647,315...654,400 		JBrowse link
G Myo3a myosin IIIA involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005 (PMID:15316067) RGD PMID:15316067 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918 		JBrowse link
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 ISO (PMID:7870171)
MGI:1857528|MGI:2155417|MGI:2155422|MGI:2155423|MGI:2182918|MGI:3045593 (PMID:11222540), (PMID:15316067)		 RGD PMID:7870171 PMID:11222540 PMID:15316067 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO MGI:3793713 (PMID:25652399) RGD PMID:25652399 NCBI chr 2:45,951,327...46,061,829
Ensembl chr 2:45,951,313...46,061,846 		JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22937111)		 Ensembl
RGD		 PMID:22937111 GO_REF:0000107 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176560 (PMID:10706625), (PMID:16702404) RGD PMID:10706625 PMID:16702404 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Nxnl2 nucleoredoxin-like 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5426260 (PMID:22343139)		 GO_Central
RGD		 PMID:22343139 GO_REF:0000033 NCBI chr17:14,031,151...14,035,897
Ensembl chr17:14,031,153...14,036,189 		JBrowse link
G Nyx nyctalopin acts_upstream_of_or_within ISO MGI:2177945 (PMID:12506099), (PMID:15359216) RGD PMID:12506099 PMID:15359216 NCBI chr  X:9,280,864...9,301,900
Ensembl chr  X:9,280,864...9,301,900 		JBrowse link
G Olfm2 olfactomedin 2 acts_upstream_of_or_within ISO (PMID:25218043) RGD PMID:25218043 NCBI chr 8:19,204,472...19,282,154
Ensembl chr 8:19,204,475...19,282,117 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11017080)		 ParkinsonsUK-UCL
Ensembl
RGD		 PMID:11017080 GO_REF:0000024 GO_REF:0000107 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 involved_in ISO (PMID:15342707) RGD PMID:15342707 NCBI chr 1:78,879,612...78,910,453
Ensembl chr 1:78,880,114...78,901,469
Ensembl chr 1:78,880,114...78,901,469 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:151,905,056...151,925,419
Ensembl chr  X:151,905,096...151,925,388 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn4 opsin 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Opn5 opsin 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:2448714 (PMID:16799054) RGD PMID:16799054 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdc phosducin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:62,297,281...62,371,754
Ensembl chr13:62,358,196...62,371,754 		JBrowse link
G Pdcl phosducin like involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000043
MGI:3576662|MGI:5516193 (PMID:23637185)		 UniProt
RGD		 PMID:23637185 GO_REF:0000043 NCBI chr 3:21,110,165...21,119,763
Ensembl chr 3:21,110,167...21,119,715
Ensembl chr 3:21,110,167...21,119,715 		JBrowse link
G Pde6c phosphodiesterase 6C involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2657247 (PMID:22937111)		 GO_Central
RGD		 PMID:22937111 GO_REF:0000033 NCBI chr 1:235,909,583...235,965,435
Ensembl chr 1:235,909,775...235,965,315 		JBrowse link
G Pde6d phosphodiesterase 6D involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:87,192,989...87,237,979
Ensembl chr 9:87,192,983...87,237,969 		JBrowse link
G Pde6g phosphodiesterase 6G involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:105,721,502...105,726,150
Ensembl chr10:105,721,682...105,726,719 		JBrowse link
G Pde6h phosphodiesterase 6H involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within ISO MGI:3527191 (PMID:15649713) RGD PMID:15649713 NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048 		JBrowse link
G Rcvrn recoverin acts_upstream_of_or_within ISO MGI:3584102 (PMID:15173221) RGD PMID:15173221 NCBI chr10:52,388,706...52,396,454
Ensembl chr10:52,388,706...52,396,453 		JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:8486383) RGD PMID:8486383 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:12407145) RGD PMID:12407145 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in ISO (PMID:15790565) RGD PMID:15790565 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in ISO (PMID:12226107)
(PMID:17032653)		 RGD PMID:12226107 PMID:17032653 NCBI chr 6:98,015,465...98,028,388
Ensembl chr 6:98,015,465...98,028,388 		JBrowse link
G Rdh8 retinol dehydrogenase 8 acts_upstream_of_or_within ISO MGI:3586327 (PMID:15755727) RGD PMID:15755727 NCBI chr 8:19,353,191...19,360,462
Ensembl chr 8:19,353,191...19,360,462 		JBrowse link
G Rgr retinal G protein coupled receptor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:12,801,594...12,816,402
Ensembl chr16:12,801,594...12,816,223 		JBrowse link
G Rgs9 regulator of G-protein signaling 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:94,195,265...94,270,892
Ensembl chr10:94,197,054...94,270,892 		JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181812 (PMID:22937111)		 Ensembl
RGD		 PMID:22937111 GO_REF:0000107 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rp1l1 RP1 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator involved_in
acts_upstream_of_or_within		 ISO (PMID:9399904)
MGI:2386674 (PMID:12651948)		 RGD PMID:9399904 PMID:12651948 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 acts_upstream_of_or_within ISO MGI:2655714 (PMID:12651948) RGD PMID:12651948 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:218,362,195...218,374,387
Ensembl chr 2:218,362,200...218,374,599 		JBrowse link
G Rs1 retinoschisin 1 involved_in ISO (PMID:19093009) RGD PMID:19093009 NCBI chr  X:33,962,440...33,992,203
Ensembl chr  X:33,963,657...33,992,115 		JBrowse link
G Slc24a1 solute carrier family 24 member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:65,440,842...65,466,001
Ensembl chr 8:65,440,730...65,466,001 		JBrowse link
G Slc38a8 solute carrier family 38, member 8 acts_upstream_of_or_within ISO (PMID:37862028) RGD PMID:37862028 NCBI chr19:47,522,781...47,561,443
Ensembl chr19:47,525,301...47,554,726 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23056253)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23056253 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO GO:0007601 (PMID:12808454) RGD PMID:12808454 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (PMID:23543054) RGD PMID:23543054 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (PMID:22920256) RGD PMID:22920256 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (PMID:16445854) RGD PMID:16445854 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 involved_in ISO (PMID:19878917) RGD PMID:19878917 NCBI chr 1:117,718,896...117,835,434
Ensembl chr 1:117,718,896...117,834,605 		JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr10:63,237,862...63,243,339
Ensembl chr10:63,237,903...63,243,339 		JBrowse link
G Ush2a usherin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Vsx1 visual system homeobox 1 acts_upstream_of_or_within ISO MGI:3040317 (PMID:15043821) RGD PMID:15043821 NCBI chr 3:139,514,270...139,521,869
Ensembl chr 3:139,514,270...139,521,869 		JBrowse link
G Vsx2 visual system homeobox 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:9771706), (PMID:9817917) RGD PMID:9771706 PMID:9817917 NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (PMID:13678579), (PMID:20676059) RGD PMID:13678579 PMID:20676059 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522 		JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in ISO (PMID:24413176) RGD PMID:24413176 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223 		JBrowse link
G Best1 bestrophin 1 acts_upstream_of_or_within ISO MGI:3795281 (PMID:16636205) RGD PMID:16636205 NCBI chr 1:206,629,340...206,646,085
Ensembl chr 1:206,629,500...206,646,063 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413 		JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:152,408,588...152,521,478
Ensembl chr 4:152,408,657...152,521,268 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO MGI:1856936 (PMID:16636205) RGD PMID:16636205 NCBI chr 3:36,906,771...37,169,165
Ensembl chr 3:36,910,427...37,168,944 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (PMID:21680557) RGD PMID:21680557 NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023 		JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (PMID:30998843) RGD PMID:30998843 NCBI chr 3:144,470,946...144,516,125
Ensembl chr 3:144,471,214...144,516,125 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:22447858) RGD PMID:22447858 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (PMID:16820008) RGD PMID:16820008 NCBI chr 5:46,991,051...47,002,902
Ensembl chr 5:46,992,946...46,996,570 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17584859)
GO_REF:0000033
MGI:2152779 (PMID:18171936)		 RGD
GO_Central		 PMID:17584859 PMID:18171936 GO_REF:0000033 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:12077706)
MGI:3588845 (PMID:17065522)		 RGD PMID:12077706 PMID:17065522 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17405131)		 UniProt
RGD		 PMID:17405131 GO_REF:0000024 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717 		JBrowse link
G Gucy2f guanylate cyclase 2F involved_in ISO (PMID:17255100) RGD PMID:17255100 NCBI chr  X:105,710,356...105,808,183
Ensembl chr  X:105,710,356...105,808,183 		JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within ISO MGI:1856523|MGI:6367783|MGI:6367794|MGI:97998 (PMID:26420485), (PMID:28053051) RGD PMID:26420485 PMID:28053051 NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454 		JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO MGI:2445721 (PMID:12484775) RGD PMID:12484775 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO
ISS		 (PMID:27889058)
GO_REF:0000024		 RGD
UniProt		 PMID:27889058 GO_REF:0000024 NCBI chr 7:9,373,927...9,380,845
Ensembl chr 7:9,373,927...9,380,597 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3028628 (PMID:14625292)		 GO_Central
RGD		 PMID:14625292 GO_REF:0000033 NCBI chr 1:88,249,438...88,250,151
Ensembl chr 1:88,249,438...88,250,151 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO MGI:102791 (PMID:28053051) RGD PMID:28053051 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:107555 (PMID:21835343) RGD PMID:21835343 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084 		JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO MGI:107556 (PMID:21835343) RGD PMID:21835343 NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311 		JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:6,412,170...6,424,103
Ensembl chr20:6,412,171...6,424,073 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    multicellular organismal process 8904
      system process 3539
        nervous system process 2753
          sensory perception 2077
            sensory perception of light stimulus 149
              visual perception 145
                detection of light stimulus involved in visual perception 24
                visual perception involved in equilibrioception 0
paths to the root