Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:excretion
go back to main search page
Accession:GO:0007588 term browser browse the term
Definition:The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.
Synonyms:xref: Wikipedia:Excretion

show annotations for term's descendants           Sort by:
 
excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO UniProtKB:Q99PE8 (PMID:14504269)
(MGI:MGI:2681374|PMID:14504269)		 RGD PMID:14504269 MGI:MGI:2681374 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207 		JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO UniProtKB:Q9DBM0 (PMID:14504269)
(MGI:MGI:2681374|PMID:14504269)		 RGD PMID:14504269 MGI:MGI:2681374 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708 		JBrowse link
G Agt angiotensinogen ISO MGI:MGI:2136636 (MGI:MGI:3618038|PMID:9557921) RGD PMID:9557921 MGI:MGI:3618038 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433 		JBrowse link
G Amn amnion associated transmembrane protein ISO MGI:MGI:2135304|MGI:MGI:2135454 (MGI:MGI:3578036|PMID:15342463) RGD PMID:15342463 MGI:MGI:3578036 NCBI chr 6:135,724,455...135,731,896
Ensembl chr 6:135,724,455...135,731,896 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 ISO (PMID:12414817) RGD PMID:12414817 NCBI chr 4:65,736,585...65,821,916
Ensembl chr 4:65,736,585...65,818,521 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 ISS
ISO		 GO_REF:0000024
(PMID:12414817), (PMID:19478356)		 UniProt
RGD		 PMID:12414817, PMID:19478356 GO_REF:0000024 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206 		JBrowse link
G Dab2 DAB adaptor protein 2 ISO MGI:MGI:2387168 (MGI:MGI:2178022|PMID:11927540) RGD PMID:11927540 MGI:MGI:2178022 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270 		JBrowse link
G Grhpr glyoxylate and hydroxypyruvate reductase ISO (PMID:10484776) RGD PMID:10484776 NCBI chr 5:60,528,981...60,538,410
Ensembl chr 5:60,528,997...60,538,375 		JBrowse link
G Guca2b guanylate cyclase activator 2B ISO MGI:MGI:2679505 (MGI:MGI:2678878|PMID:14561709) RGD PMID:14561709 MGI:MGI:2678878 NCBI chr 5:138,695,591...138,697,641
Ensembl chr 5:138,695,591...138,697,641 		JBrowse link
G Kirrel1 kirre like nephrin family adhesion molecule 1 ISO MGI:MGI:2388348 (MGI:MGI:2157763|PMID:11416156) RGD PMID:11416156 MGI:MGI:2157763 NCBI chr 2:186,420,743...186,515,209
Ensembl chr 2:186,420,795...186,515,135 		JBrowse link
G Mllt6 MLLT6, PHD finger containing ISO MGI:MGI:3856248 (MGI:MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:MGI:5644399 NCBI chr10:85,607,988...85,628,171
Ensembl chr10:85,608,544...85,625,854 		JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 ISO MGI:MGI:2441654 (MGI:MGI:2181312|PMID:9689096) RGD PMID:9689096 MGI:MGI:2181312 NCBI chr19:34,408,275...34,761,003
Ensembl chr19:34,448,289...34,752,695 		JBrowse link
G Pou3f3 POU class 3 homeobox 3 ISO
IEA		 MGI:MGI:3712282 (MGI:MGI:3710076|PMID:17264314)
GO_REF:0000107		 RGD
Ensembl		 PMID:17264314 GO_REF:0000107, MGI:MGI:3710076 NCBI chr 9:49,479,148...49,482,246
Ensembl chr 9:49,479,023...49,482,252 		JBrowse link
G Slc12a1 solute carrier family 12 member 1 ISO MGI:MGI:3712283 (MGI:MGI:3710076|PMID:17264314) RGD PMID:17264314 MGI:MGI:3710076 NCBI chr 3:117,421,531...117,498,372
Ensembl chr 3:117,421,604...117,498,367 		JBrowse link
G Umod uromodulin ISO
IEA		 MGI:MGI:3712284 (MGI:MGI:3710076|PMID:17264314)
GO_REF:0000107		 RGD
Ensembl		 PMID:17264314 GO_REF:0000107, MGI:MGI:3710076 NCBI chr 1:189,186,027...189,199,939
Ensembl chr 1:189,186,026...189,199,376 		JBrowse link
defecation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdk midkine ISO (MGI:MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:MGI:2178952 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916 		JBrowse link
micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A IMP RGD PMID:20668103 RGD:5688347 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451 		JBrowse link
G Adra1d adrenoceptor alpha 1D IMP RGD PMID:20668103 RGD:5688347 NCBI chr 3:124,129,558...124,145,566
Ensembl chr 3:124,129,558...124,145,566 		JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:12967934 RGD:6480687 NCBI chr 1:254,547,964...254,671,811
Ensembl chr 1:254,547,620...254,671,778 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO MGI:MGI:3053849 (MGI:MGI:3053479|PMID:15184377)
(PMID:11641143)		 RGD PMID:11641143, PMID:15184377 MGI:MGI:3053479 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956 		JBrowse link
G Psap prosaposin IEA
ISO		 GO_REF:0000107
MGI:MGI:2183897 (MGI:MGI:2183819|PMID:11371512)		 Ensembl
RGD		 PMID:11371512 GO_REF:0000107, MGI:MGI:2183819 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875 		JBrowse link
negative regulation of defecation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:21277852 RGD:5491003 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362 		JBrowse link
G Npsr1 neuropeptide S receptor 1 IMP RGD PMID:21708257 RGD:9831204 NCBI chr 8:25,246,174...25,483,582
Ensembl chr 8:25,246,292...25,482,647 		JBrowse link
negative regulation of renal phosphate excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stc1 stanniocalcin 1 ISO (PMID:8700837) RGD PMID:8700837 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162 		JBrowse link
negative regulation of renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IMP RGD PMID:2966592 RGD:12880016 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822 		JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:14993484 RGD:1625254 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852 		JBrowse link
G Anpep alanyl aminopeptidase, membrane IMP RGD PMID:19996063 RGD:5131447 NCBI chr 1:141,561,364...141,604,249
Ensembl chr 1:141,561,334...141,604,273 		JBrowse link
G Avpr2 arginine vasopressin receptor 2 IMP RGD PMID:18596120 RGD:2301931 NCBI chr  X:156,889,006...156,892,707
Ensembl chr  X:156,889,410...156,891,213 		JBrowse link
G Comt catechol-O-methyltransferase IMP RGD PMID:10450019 RGD:8662342 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622 		JBrowse link
G Gnas GNAS complex locus IMP RGD PMID:21895632 RGD:5509797 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483 		JBrowse link
G Spx spexin hormone IDA PMID:22038051 UniProt PMID:22038051 RGD:8693358 NCBI chr 4:176,629,597...176,635,698
Ensembl chr 4:176,629,800...176,641,008 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:16531985 RGD:2306837 NCBI chr 5:168,078,748...168,084,133
Ensembl chr 5:168,078,748...168,084,145 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:16531985 RGD:2306837 NCBI chr10:110,364,291...110,365,451
Ensembl chr10:110,364,291...110,365,451 		JBrowse link
positive regulation of renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP
IDA		 in renal medulla RGD PMID:10070140, PMID:10070140 RGD:628573, RGD:628573 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873 		JBrowse link
G Agt angiotensinogen IMP
IDA		 RGD PMID:16380540, PMID:22689743 RGD:1582118, RGD:8549474 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:16380540 RGD:1582118 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:18596120 RGD:2301931 NCBI chr 7:67,341,366...67,345,290
Ensembl chr 7:67,341,080...67,345,308 		JBrowse link
G Drd2 dopamine receptor D2 ISO MGI:MGI:1857875 (MGI:MGI:3608592|PMID:11566895) RGD PMID:11566895 MGI:MGI:3608592 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642 		JBrowse link
G Drd3 dopamine receptor D3 IDA RGD PMID:14621190 RGD:1581467 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327 		JBrowse link
G Edn1 endothelin 1 ISO MGI:MGI:3044563|MGI:MGI:3054057 (MGI:MGI:3051206|PMID:15314687) RGD PMID:15314687 MGI:MGI:3051206 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324 		JBrowse link
G Ednrb endothelin receptor type B IMP RGD PMID:18305094 RGD:4892582 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354 		JBrowse link
G Gnai2 G protein subunit alpha i2 IMP RGD PMID:22459149 RGD:13507313 NCBI chr 8:116,370,730...116,391,337
Ensembl chr 8:116,370,744...116,391,307 		JBrowse link
G Nppb natriuretic peptide B IDA RGD PMID:8289999 RGD:7247315 NCBI chr 5:164,796,176...164,797,538
Ensembl chr 5:164,796,185...164,797,531 		JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:17559853 RGD:2304131 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:18287210 RGD:10003052 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448 		JBrowse link
G Snx5 sorting nexin 5 IMP RGD PMID:23195037 RGD:13508622 NCBI chr 3:138,378,032...138,397,944
Ensembl chr 3:138,378,202...138,397,870 		JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:18364471 RGD:2304318 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819 		JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18364471 RGD:2304318 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504 		JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698 		JBrowse link
regulation of excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphs1 NPHS1 adhesion molecule, nephrin IEA
ISO		 GO_REF:0000107
(MGI:MGI:1929558|PMID:11136707)		 Ensembl
RGD		 PMID:11136707 GO_REF:0000107, MGI:MGI:1929558 NCBI chr 1:88,922,346...88,950,560
Ensembl chr 1:88,922,433...88,950,559 		JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO MGI:MGI:2386785 (MGI:MGI:3687116|PMID:12952857), (MGI:MGI:3692157|PMID:16249272) RGD PMID:12952857, PMID:16249272 MGI:MGI:3687116, MGI:MGI:3692157 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145 		JBrowse link
regulation of renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:11390024 RGD:1582107 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433 		JBrowse link
G Avp arginine vasopressin IMP RGD PMID:18596120 RGD:2301931 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460 		JBrowse link
G Corin corin, serine peptidase IMP
ISO
IEA		 PMID:20613715
(MGI:MGI:5427566|PMID:22418978)
GO_REF:0000107		 RGD
Ensembl		 PMID:22418978, PMID:20613715 GO_REF:0000107, MGI:MGI:5427566, RGD:8553515 NCBI chr14:38,247,379...38,474,931
Ensembl chr14:38,247,791...38,473,648 		JBrowse link
renal potassium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:4455253|PMID:20219947) RGD PMID:20219947 MGI:MGI:4455253 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664 		JBrowse link
G Mllt6 MLLT6, PHD finger containing ISO MGI:MGI:3856248 (MGI:MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:MGI:5644399 NCBI chr10:85,607,988...85,628,171
Ensembl chr10:85,608,544...85,625,854 		JBrowse link
G Slc5a2 solute carrier family 5 member 2 IMP RGD PMID:29790389 RGD:13673897 NCBI chr 1:199,682,688...199,688,809
Ensembl chr 1:199,682,688...199,688,809 		JBrowse link
renal sodium excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 ISO MGI:MGI:2673510 (MGI:MGI:5529401|PMID:24051376) RGD PMID:24051376 MGI:MGI:5529401 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206 		JBrowse link
G Mllt6 MLLT6, PHD finger containing ISO MGI:MGI:3856248 (MGI:MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:MGI:5644399 NCBI chr10:85,607,988...85,628,171
Ensembl chr10:85,608,544...85,625,854 		JBrowse link
smooth muscle contraction involved in micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO MGI:MGI:2674119 (MGI:MGI:3699638|PMID:15132976) RGD PMID:15132976 MGI:MGI:3699638 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913 		JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO
IEA		 MGI:MGI:3053849 (MGI:MGI:3612609|PMID:15827347)
(PMID:11641143)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641143, PMID:15827347 GO_REF:0000107, MGI:MGI:3612609 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956 		JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18945947 RGD:2304258 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504 		JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 ISO MGI:MGI:1934023 (MGI:MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:MGI:2385968 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679 		JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:129,437,423...129,441,553
Ensembl chr 6:129,438,158...129,440,574 		JBrowse link
G Pgr progesterone receptor ISO (PMID:24296318) RGD PMID:24296318 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796 		JBrowse link
synaptic transmission involved in micturition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit ISO
IEA		 MGI:MGI:2155602 (MGI:MGI:3607823|PMID:10771006)
(PMID:11450844)
GO_REF:0000107		 RGD
Ensembl		 PMID:10771006, PMID:11450844 GO_REF:0000107, MGI:MGI:3607823 NCBI chr 8:59,594,007...59,607,122
Ensembl chr 8:59,592,403...59,607,275 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:MGI:87892 (MGI:MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:MGI:2156010 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785 		JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit ISO (PMID:11450844)
MGI:MGI:2158716|MGI:MGI:87891 (MGI:MGI:2156010|PMID:10531434), (MGI:MGI:3607823|PMID:10771006)		 RGD PMID:10531434, PMID:10771006, PMID:11450844 MGI:MGI:2156010, MGI:MGI:3607823 NCBI chr 8:59,610,489...59,629,073
Ensembl chr 8:59,609,693...59,629,133 		JBrowse link
urate salt excretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 IEP
ISO		 (PMID:19506252) RGD PMID:19506252, PMID:28679589 RGD:13439745 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621 		JBrowse link
G Slc22a12 solute carrier family 22 member 12 IEP RGD PMID:28679589 RGD:13439745 NCBI chr 1:221,910,787...221,919,277
Ensembl chr 1:221,910,767...221,919,301 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    multicellular organismal process 9055
      system process 3445
        excretion 63
          defecation + 3
          micturition + 14
          regulation of excretion + 32
          renal phosphate excretion + 1
          renal potassium excretion 3
          renal sodium excretion + 28
          urate salt excretion 2
paths to the root

Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.