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ONTOLOGY REPORT - ANNOTATIONS


Term:excretion
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Accession:GO:0007588 term browser browse the term
Definition:The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.
Synonyms:xref: Wikipedia:Excretion


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excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO UniProtKB:Q99PE8 (PMID:14504269)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269 MGI:2681374 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO UniProtKB:Q9DBM0 (PMID:14504269)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269 MGI:2681374 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (MGI:3618038|PMID:9557921) RGD PMID:9557921 MGI:3618038 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Amn amnion associated transmembrane protein acts_upstream_of_or_within ISO MGI:2135304|MGI:2135454 (MGI:3578036|PMID:15342463) RGD PMID:15342463 MGI:3578036 NCBI chr 6:130,311,372...130,318,815
Ensembl chr 6:130,311,372...130,318,815
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in ISO (PMID:12414817) RGD PMID:12414817 NCBI chr 4:66,760,159...66,842,110
Ensembl chr 4:66,760,159...66,842,110
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in ISO
ISS
(PMID:12414817), (PMID:19478356)
GO_REF:0000024
RGD
UniProt
PMID:12414817 PMID:19478356 GO_REF:0000024 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Dab2 DAB adaptor protein 2 acts_upstream_of_or_within ISO MGI:2387168 (MGI:2178022|PMID:11927540) RGD PMID:11927540 MGI:2178022 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Grhpr glyoxylate and hydroxypyruvate reductase involved_in ISO (PMID:10484776) RGD PMID:10484776 NCBI chr 5:59,234,179...59,243,614
Ensembl chr 5:59,234,192...59,243,603
JBrowse link
G Guca2b guanylate cyclase activator 2B acts_upstream_of_or_within ISO MGI:2679505 (MGI:2678878|PMID:14561709) RGD PMID:14561709 MGI:2678878 NCBI chr 5:133,246,891...133,248,941
Ensembl chr 5:133,246,909...133,248,966
JBrowse link
G Kirrel1 kirre like nephrin family adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2388348 (MGI:2157763|PMID:11416156) RGD PMID:11416156 MGI:2157763 NCBI chr 2:172,521,644...172,615,057
Ensembl chr 2:172,525,245...172,615,299
JBrowse link
G Mllt6 MLLT6, PHD finger containing acts_upstream_of_or_within ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:82,657,258...82,678,899
Ensembl chr10:82,656,872...82,676,073
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 acts_upstream_of_or_within ISO MGI:2441654 (MGI:2181312|PMID:9689096) RGD PMID:9689096 MGI:2181312 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3712282 (MGI:3710076|PMID:17264314)
Ensembl
RGD
PMID:17264314 GO_REF:0000107 MGI:3710076 NCBI chr 9:44,945,872...44,948,986
Ensembl chr 9:44,945,872...44,948,992
JBrowse link
G Slc12a1 solute carrier family 12 member 1 acts_upstream_of_or_within ISO MGI:3712283 (MGI:3710076|PMID:17264314) RGD PMID:17264314 MGI:3710076 NCBI chr 3:112,406,140...112,482,913
Ensembl chr 3:112,406,140...112,482,899
JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO MGI:3712284 (MGI:3710076|PMID:17264314) RGD PMID:17264314 MGI:3710076 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
defecation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A IMP RGD PMID:20668103 RGD:5688347 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Adra1d adrenoceptor alpha 1D IMP RGD PMID:20668103 RGD:5688347 NCBI chr 3:118,793,356...118,809,354
Ensembl chr 3:118,793,346...118,809,354
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:12967934 RGD:6480687 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11641143)
MGI:3053849 (MGI:3053479|PMID:15184377)
RGD PMID:11641143 PMID:15184377 MGI:3053479 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:2183897 (MGI:2183819|PMID:11371512) RGD PMID:11371512 MGI:2183819 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6406757|PMID:19214995)
Ensembl
RGD
PMID:19214995 GO_REF:0000107 MGI:6406757 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
negative regulation of defecation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:21277852 RGD:5491003 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Npsr1 neuropeptide S receptor 1 IMP RGD PMID:21708257 RGD:9831204 NCBI chr 8:22,606,946...22,831,558
Ensembl chr 8:22,606,946...22,831,558
JBrowse link
negative regulation of renal phosphate excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stc1 stanniocalcin 1 involved_in ISO (PMID:8700837) RGD PMID:8700837 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
JBrowse link
negative regulation of renal sodium excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IMP RGD PMID:2966592 RGD:12880016 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:14993484 RGD:1625254 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Anpep alanyl aminopeptidase, membrane IMP RGD PMID:19996063 RGD:5131447 NCBI chr 1:133,767,332...133,810,137
Ensembl chr 1:133,767,332...133,785,789
JBrowse link
G Avpr2 arginine vasopressin receptor 2 IMP RGD PMID:18596120 RGD:2301931 NCBI chr  X:151,633,501...151,636,000
Ensembl chr  X:151,633,522...151,635,989
JBrowse link
G Comt catechol-O-methyltransferase IMP RGD PMID:10450019 RGD:8662342 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642
JBrowse link
G Gnas GNAS complex locus IMP RGD PMID:21895632 RGD:5509797 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262
JBrowse link
G Spx spexin hormone involved_in IDA PMID:22038051 UniProt PMID:22038051 RGD:8693358 NCBI chr 4:175,356,044...175,362,082
Ensembl chr 4:175,356,247...175,362,082
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:16531985 RGD:2306837 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:16531985 RGD:2306837 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252
JBrowse link
positive regulation of renal sodium excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP
IDA
in renal medulla RGD PMID:10070140 PMID:10070140 RGD:628573, RGD:628573 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Agt angiotensinogen IMP
IDA
RGD PMID:16380540 PMID:22689743 RGD:1582118, RGD:8549474 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:16380540 RGD:1582118 NCBI chr  X:112,119,673...112,124,060
Ensembl chr  X:112,120,228...112,124,057
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:18596120 RGD:2301931 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:1857875 (MGI:3608592|PMID:11566895) RGD PMID:11566895 MGI:3608592 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 IDA RGD PMID:14621190 RGD:1581467 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:3044563|MGI:3054057 (MGI:3051206|PMID:15314687) RGD PMID:15314687 MGI:3051206 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ednrb endothelin receptor type B IMP RGD PMID:18305094 RGD:4892582 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Gnai2 G protein subunit alpha i2 IMP RGD PMID:22459149 RGD:13507313 NCBI chr 8:108,288,401...108,309,009
Ensembl chr 8:108,288,401...108,308,979
JBrowse link
G Nppb natriuretic peptide B IDA RGD PMID:8289999 RGD:7247315 NCBI chr 5:158,416,813...158,418,175
Ensembl chr 5:158,416,866...158,418,168
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:17559853 RGD:2304131 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:18287210 RGD:10003052 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Snx5 sorting nexin 5 IMP RGD PMID:23195037 RGD:13508622 NCBI chr 3:131,621,709...131,641,205
Ensembl chr 3:131,621,880...131,641,192
JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:18364471 RGD:2304318 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18364471 RGD:2304318 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
regulation of excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA
ISO
GO_REF:0000107
(MGI:1929558|PMID:11136707)
Ensembl
RGD
PMID:11136707 GO_REF:0000107 MGI:1929558 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 acts_upstream_of_or_within ISO MGI:2386785 (MGI:3687116|PMID:12952857), (MGI:3692157|PMID:16249272) RGD PMID:12952857 PMID:16249272 MGI:3687116 MGI:3692157 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
regulation of renal sodium excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:11390024 RGD:1582107 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Avp arginine vasopressin IMP RGD PMID:18596120 RGD:2301931 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425
JBrowse link
G Corin corin, serine peptidase involved_in IMP
ISO
IEA
PMID:20613715
(MGI:5427566|PMID:22418978)
GO_REF:0000107
RGD
Ensembl
PMID:22418978 PMID:20613715 GO_REF:0000107 MGI:5427566, RGD:8553515 NCBI chr14:35,680,601...35,910,703
Ensembl chr14:35,681,304...35,909,503
JBrowse link
renal potassium excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:4455253|PMID:20219947) RGD PMID:20219947 MGI:4455253 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Mllt6 MLLT6, PHD finger containing acts_upstream_of_or_within ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:82,657,258...82,678,899
Ensembl chr10:82,656,872...82,676,073
JBrowse link
G Slc5a2 solute carrier family 5 member 2 IMP RGD PMID:29790389 RGD:13673897 NCBI chr 1:182,847,185...182,853,309
Ensembl chr 1:182,847,106...182,853,306
JBrowse link
renal sodium excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 acts_upstream_of_or_within ISO MGI:2673510 (MGI:5529401|PMID:24051376) RGD PMID:24051376 MGI:5529401 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Ednrb endothelin receptor type B involved_in ISO MGI:3693642 (MGI:3692691|PMID:16868309) RGD PMID:16868309 MGI:3692691 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Mllt6 MLLT6, PHD finger containing acts_upstream_of_or_within ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:82,657,258...82,678,899
Ensembl chr10:82,656,872...82,676,073
JBrowse link
smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO MGI:2674119 (MGI:3699638|PMID:15132976) RGD PMID:15132976 MGI:3699638 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:11641143)
GO_REF:0000107
MGI:3053849 (MGI:3612609|PMID:15827347)
RGD
Ensembl
PMID:11641143 PMID:15827347 GO_REF:0000107 MGI:3612609 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18945947 RGD:2304258 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:2385968 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Pgr progesterone receptor involved_in ISO (PMID:24296318) RGD PMID:24296318 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
synaptic transmission involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:11450844)
MGI:2155602 (MGI:3607823|PMID:10771006)
GO_REF:0000107
RGD
Ensembl
PMID:10771006 PMID:11450844 GO_REF:0000107 MGI:3607823 NCBI chr 8:55,401,981...55,415,012
Ensembl chr 8:55,401,702...55,415,165
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:87892 (MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:2156010 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit involved_in
acts_upstream_of_or_within
ISO (PMID:11450844)
MGI:2158716|MGI:87891 (MGI:2156010|PMID:10531434), (MGI:3607823|PMID:10771006)
RGD PMID:10531434 PMID:10771006 PMID:11450844 MGI:2156010 MGI:3607823 NCBI chr 8:55,418,379...55,436,967
Ensembl chr 8:55,418,313...55,437,027
JBrowse link
urate salt excretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg2 ATP binding cassette subfamily G member 2 involved_in IEP
ISO
(PMID:19506252) RGD PMID:19506252 PMID:28679589 RGD:13439745 NCBI chr 4:87,676,241...87,802,757
Ensembl chr 4:87,745,319...87,802,409
JBrowse link
G Slc22a12 solute carrier family 22 member 12 IEP RGD PMID:28679589 RGD:13439745 NCBI chr 1:203,845,039...203,852,496
Ensembl chr 1:203,845,048...203,853,555
JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6367886|PMID:29357410)
Ensembl
RGD
PMID:29357410 GO_REF:0000107 MGI:6367886 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    multicellular organismal process 8824
      system process 3339
        excretion 63
          defecation + 3
          micturition + 15
          regulation of excretion + 32
          renal phosphate excretion + 1
          renal potassium excretion 3
          renal sodium excretion + 28
          urate salt excretion 3
paths to the root