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ONTOLOGY REPORT - ANNOTATIONS


Term:embryo implantation
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Accession:GO:0007566 term browser browse the term
Definition:Attachment of the blastocyst to the uterine lining.
Synonyms:exact_synonym: blastocyst implantation



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embryo implantation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3690371 (MGI:3689802|PMID:16055734)
Ensembl
RGD
PMID:16055734 GO_REF:0000107 MGI:3689802 NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354
JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5488888|PMID:14500577) RGD PMID:14500577 MGI:5488888 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:3796520 (MGI:3789431|PMID:18448678) RGD PMID:18448678 MGI:3789431 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within ISO MGI:2176600 (MGI:1353879|PMID:10691732) RGD PMID:10691732 MGI:1353879 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
G Bsg basigin (Ok blood group) IEP RGD PMID:12141934 RGD:2289056 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
JBrowse link
G Calca calcitonin-related polypeptide alpha involved_in ISO (PMID:17983652) RGD PMID:17983652 NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Cdh1 cadherin 1 involved_in ISO (MGI:5430269|PMID:22378759) RGD PMID:22378759 MGI:5430269 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cst3 cystatin C IEP RGD PMID:16935259 RGD:2306499 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388024 (MGI:1932625|PMID:11283268)
Ensembl
RGD
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3628891|PMID:16487956)
(PMID:16487956)
UniProt
RGD
PMID:16487956 GO_REF:0000024 MGI:3628891 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Epo erythropoietin acts_upstream_of_or_within ISO (MGI:3762687|PMID:17300687) RGD PMID:17300687 MGI:3762687 NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946
JBrowse link
G Exoc1 exocyst complex component 1 acts_upstream_of_or_within ISO MGI:4888885 (MGI:5788619|PMID:26346620) RGD PMID:26346620 MGI:5788619 NCBI chr14:31,611,536...31,659,920
Ensembl chr14:31,611,547...31,659,914
JBrowse link
G Fbln1 fibulin 1 IEP RGD PMID:15112320 RGD:1598926 NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 acts_upstream_of_or_within ISO MGI:3579432|MGI:3690438 (MGI:3603974|PMID:16176985), (MGI:3708425|PMID:17142810) RGD PMID:16176985 PMID:17142810 MGI:3603974 MGI:3708425 NCBI chr 4:161,703,379...161,711,833
Ensembl chr 4:161,703,379...161,711,833
JBrowse link
G Fut7 fucosyltransferase 7 involved_in ISO (PMID:18402946) RGD PMID:18402946 NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260
JBrowse link
G Ggn gametogenetin acts_upstream_of_or_within ISO MGI:5503309 (MGI:5502508|PMID:23451117) RGD PMID:23451117 MGI:5502508 NCBI chr 1:84,470,488...84,474,120
Ensembl chr 1:84,470,508...84,474,114
JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (MGI:3589098|PMID:15901638) RGD PMID:15901638 MGI:3589098 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within ISO MGI:5474378 (MGI:72722|PMID:7534202) RGD PMID:7534202 MGI:72722 NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:1857577 (MGI:1197796|PMID:9435283) RGD PMID:9435283 MGI:1197796 NCBI chr 1:186,313,237...186,315,201
Ensembl chr 1:186,313,063...186,315,201
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 IEP RGD PMID:10372552 RGD:1624264 NCBI chr 5:149,677,437...149,778,594 JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 IEP RGD PMID:15284205 RGD:1626544 NCBI chr14:30,737,414...30,797,317
Ensembl chr14:30,737,164...30,797,314
JBrowse link
G Il11ra1 interleukin 11 receptor subunit alpha 1 IMP RGD PMID:11570967 RGD:1302225 NCBI chr 5:56,931,824...56,941,408
Ensembl chr 5:56,935,516...56,941,408
JBrowse link
G Itgb3 integrin subunit beta 3 IEP RGD PMID:16528553 RGD:4990465 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Klf9 Kruppel-like factor 9 acts_upstream_of_or_within ISO (MGI:3050178|PMID:15117941) RGD PMID:15117941 MGI:3050178 NCBI chr 1:220,700,108...220,725,029
Ensembl chr 1:220,700,108...220,725,037
JBrowse link
G Lamb1 laminin subunit beta 1 acts_upstream_of_or_within ISO MGI:3048667 (MGI:3045829|PMID:15102706) RGD PMID:15102706 MGI:3045829 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177780 (MGI:82525|PMID:1522892)
Ensembl
RGD
PMID:1522892 GO_REF:0000107 MGI:82525 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
JBrowse link
G Mirlet7a1 microRNA let-7a-1 acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
JBrowse link
G Mirlet7b microRNA let-7b acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mirlet7c1 microRNA let-7c-1 acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
JBrowse link
G Mirlet7c2 microRNA let-7c-2 acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
JBrowse link
G Mirlet7d microRNA let-7d acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr17:16,115,893...16,115,990
Ensembl chr17:16,115,893...16,115,990
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3813178|PMID:18556655)
Ensembl
RGD
PMID:18556655 GO_REF:0000107 MGI:3813178 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3813178|PMID:18556655)
Ensembl
RGD
PMID:18556655 GO_REF:0000107 MGI:3813178 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mst1 macrophage stimulating 1 acts_upstream_of_or_within ISO (MGI:2653648|PMID:12606483) RGD PMID:12606483 MGI:2653648 NCBI chr 8:108,767,886...108,773,425
Ensembl chr 8:108,768,839...108,773,416
JBrowse link
G Mug1 murinoglobulin 1 acts_upstream_of_or_within ISO MGI:87854 (MGI:3697793|PMID:14580373) RGD PMID:14580373 MGI:3697793 NCBI chr 4:155,076,270...155,130,051
Ensembl chr 4:155,076,312...155,130,051
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 acts_upstream_of_or_within ISO MGI:2178449 (MGI:3811945|PMID:18804437) RGD PMID:18804437 MGI:3811945 NCBI chr 1:67,778,037...67,810,946
Ensembl chr 1:67,777,948...68,023,736
JBrowse link
G Ooep oocyte expressed protein acts_upstream_of_or_within ISO MGI:3812181 (MGI:3811945|PMID:18804437) RGD PMID:18804437 MGI:3811945 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (MGI:3799557|PMID:15601911) RGD PMID:15601911 MGI:3799557 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:15019809 RGD:1581927 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Polr1b RNA polymerase I subunit B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3774130 (MGI:3771267|PMID:18023416)
Ensembl
RGD
PMID:18023416 GO_REF:0000107 MGI:3771267 NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta acts_upstream_of_or_within IEP
ISO
(MGI:1340153|PMID:10385625) RGD PMID:10385625 PMID:12773104 MGI:1340153, RGD:2324898 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO MGI:3805889 (MGI:5548017|PMID:24268575) RGD PMID:24268575 MGI:5548017 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
JBrowse link
G Prss29 serine protease 29 acts_upstream_of_or_within ISO MGI:2149951 (MGI:3703092|PMID:17156484) RGD PMID:17156484 MGI:3703092 NCBI chr10:14,337,315...14,341,038
Ensembl chr10:14,339,036...14,341,038
JBrowse link
G Ptgis prostaglandin I2 synthase acts_upstream_of_or_within ISO (MGI:1340153|PMID:10385625) RGD PMID:10385625 MGI:1340153 NCBI chr 3:155,928,564...155,964,228 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 acts_upstream_of_or_within IMP
ISO
MGI:1857239 (MGI:1340153|PMID:10385625) RGD PMID:10385625 PMID:17485303 MGI:1340153, RGD:2300266 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Pzp pregnancy-zone protein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:161,759,176...161,805,271
Ensembl chr 4:161,759,182...161,805,276
JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr 5:58,102,915...58,169,513
Ensembl chr 5:58,102,981...58,169,502
JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:98215 (MGI:1328715|PMID:9892670) RGD PMID:9892670 MGI:1328715 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Serpine2 serpin family E member 2 IEP RGD PMID:11457471 RGD:2317933 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3526701 (MGI:1201750|PMID:9516486)
UniProt
RGD
PMID:9516486 GO_REF:0000024 MGI:1201750 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Sostdc1 sclerostin domain containing 1 NAS RGD PMID:12390898 RGD:634485 NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
JBrowse link
G Stc1 stanniocalcin 1 IEP RGD PMID:16735553 RGD:2324698 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
JBrowse link
G Stc2 stanniocalcin 2 IEP RGD PMID:16735553 RGD:2324698 NCBI chr10:16,251,046...16,260,815
Ensembl chr10:16,250,853...16,262,973
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:106907 (MGI:3770613|PMID:18083014) RGD PMID:18083014 MGI:3770613 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 IEP RGD PMID:16426643 RGD:1601594 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 IEP RGD PMID:16426643 RGD:1601594 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Tppp3 tubulin polymerization-promoting protein family member 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:6269789|PMID:29901777)
UniProt
RGD
PMID:29901777 GO_REF:0000024 MGI:6269789 NCBI chr19:33,345,897...33,349,610
Ensembl chr19:33,345,898...33,349,577
JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (MGI:5319411|PMID:22495301) RGD PMID:22495301 MGI:5319411 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Ube2q1 ubiquitin conjugating enzyme E2 Q1 acts_upstream_of_or_within ISO MGI:5486217 (MGI:5486114|PMID:23108111) RGD PMID:23108111 MGI:5486114 NCBI chr 2:175,198,793...175,209,152
Ensembl chr 2:175,198,873...175,207,942
JBrowse link
G Ubtfl1 upstream binding transcription factor like 1 acts_upstream_of_or_within ISO (MGI:4414743|PMID:19915186) RGD PMID:19915186 MGI:4414743
G Ubtfl6-ps1 UBTF like 6, pseudogene1 acts_upstream_of_or_within ISO (MGI:4414743|PMID:19915186) RGD PMID:19915186 MGI:4414743 NCBI chr 8:15,478,858...15,485,761 JBrowse link
G Vmp1 vacuole membrane protein 1 acts_upstream_of_or_within ISO (MGI:3813178|PMID:18556655) RGD PMID:18556655 MGI:3813178 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007
JBrowse link
negative regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C involved_in ISO
IEA
(PMID:21356369)
GO_REF:0000107
RGD
Ensembl
PMID:21356369 GO_REF:0000107 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Arhgdib Rho GDP dissociation inhibitor beta involved_in ISO (PMID:24554735) RGD PMID:24554735 NCBI chr 4:169,822,951...169,841,884
Ensembl chr 4:169,822,952...169,841,658
JBrowse link
G Calr calreticulin involved_in ISO (PMID:22377355) RGD PMID:22377355 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (PMID:30599359) RGD PMID:30599359 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:21356369) RGD PMID:21356369 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:21356369) RGD PMID:21356369 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664
JBrowse link
positive regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B involved_in ISO (PMID:21356369) RGD PMID:21356369 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
IEA
(PMID:27208409)
GO_REF:0000107
RGD
Ensembl
PMID:27208409 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Apela apelin receptor early endogenous ligand involved_in ISO (PMID:28663440) RGD PMID:28663440 NCBI chr16:24,694,231...24,703,466 JBrowse link
G C1qbp complement C1q binding protein involved_in ISS
ISO
GO_REF:0000024
(PMID:20810993)
UniProt
RGD
PMID:20810993 GO_REF:0000024 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G LOC100912649 uncharacterized LOC100912649 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in ISO (PMID:19255252) RGD PMID:19255252 NCBI chr10:91,761,798...91,862,485
Ensembl chr10:91,761,807...91,862,488
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 involved_in ISO (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:23083510) RGD PMID:23083510 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
regulation of trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbn2 fibrillin 2 involved_in ISO (PMID:32329225) RGD PMID:32329225 NCBI chr18:51,499,737...51,703,976
Ensembl chr18:51,499,737...51,703,976
JBrowse link
G Mmp12 matrix metallopeptidase 12 IMP RGD PMID:27807143 RGD:12910498 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 involved_in ISO (PMID:32194978) RGD PMID:32194978 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
JBrowse link
trophoblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb4 integrin subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4331862 (MGI:5052233|PMID:21606200)
Ensembl
RGD
PMID:21606200 GO_REF:0000107 MGI:5052233 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    reproductive process 1827
      embryo implantation 83
        trophoblast cell migration + 18
Path 2
Term Annotations click to browse term
  biological_process 19497
    reproduction 1830
      reproductive process 1827
        multi-organism reproductive process 1272
          female pregnancy 303
            embryo implantation 83
              trophoblast cell migration + 18
paths to the root