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ONTOLOGY REPORT - ANNOTATIONS


Term:sex determination
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Accession:GO:0007530 term browser browse the term
Definition:Any process that establishes and transmits the specification of sexual status of an individual organism.
Synonyms:xref: Wikipedia:Sex-determination_system



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sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone involved_in ISO (MGI:69385|PMID:7954809) RGD PMID:7954809 MGI:69385 NCBI chr 7:8,906,776...8,909,184
Ensembl chr 7:8,906,836...8,909,282
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IBA
ISO
PMID:21873635
(MGI:3851651|PMID:19457926)
RGD PMID:19457926 PMID:21873635 MGI:3851651, RGD:13792537 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 acts_upstream_of_or_within ISO MGI:98660 (MGI:1196664|PMID:9486644) RGD PMID:9486644 MGI:1196664 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24405868), (PMID:27378692), (PMID:27490115), (PMID:27610946), (PMID:27855412)
UniProt
RGD
PMID:24405868 PMID:27378692 PMID:27490115 PMID:27610946 PMID:27855412 GO_REF:0000024 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in ISO (PMID:21183788)
(MGI:5000178|PMID:21183788)
RGD PMID:21183788 MGI:5000178 NCBI chr  X:139,308,608...139,310,734
Ensembl chr  X:139,309,329...139,310,678
JBrowse link
G Sry sex determining region Y acts_upstream_of_or_within
involved_in
ISO MGI:1352460 (MGI:1196664|PMID:9486644)
(MGI:6471836|PMID:33004521)
RGD PMID:9486644 PMID:33004521 MGI:1196664 MGI:6471836
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 MGI:1347485 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
G Wt1 WT1 transcription factor involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:9815658)
MGI:2183642 (MGI:2149238|PMID:11509181)
GO_REF:0000024
RGD
UniProt
PMID:9815658 PMID:11509181 GO_REF:0000024 MGI:2149238 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
female sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:11283799)
Ensembl
RGD
PMID:11283799 GO_REF:0000107 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
female somatic sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxl2 forkhead box L2 acts_upstream_of_or_within ISO MGI:2182312 (MGI:3583842|PMID:15944199) RGD PMID:15944199 MGI:3583842 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
germ-line sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem184a transmembrane protein 184A acts_upstream_of_or_within ISO (MGI:3783844|PMID:18321981) RGD PMID:18321981 MGI:3783844 NCBI chr12:14,817,508...14,833,109
Ensembl chr12:14,822,898...14,832,065
JBrowse link
male germ-line sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k4 mitogen activated protein kinase kinase kinase 4 acts_upstream_of_or_within ISO MGI:1856634 (MGI:55544|PMID:6855886) RGD PMID:6855886 MGI:55544 NCBI chr 1:48,431,801...48,519,358
Ensembl chr 1:48,431,830...48,519,358
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2385468|MGI:2673819|MGI:3580900 (MGI:2178704|PMID:11431689), (MGI:3611673|PMID:16207837)
UniProt
RGD
PMID:11431689 PMID:16207837 GO_REF:0000024 MGI:2178704 MGI:3611673 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
male sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhh desert hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1095403 (MGI:3769860|PMID:17495005) RGD PMID:17495005 MGI:3769860 NCBI chr 7:130,050,910...130,056,406
Ensembl chr 7:130,050,910...130,056,406
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 involved_in ISO (MGI:1926717|PMID:11040213), (MGI:4420727|PMID:20007774), (MGI:4839662|PMID:20951351) RGD PMID:11040213 PMID:20007774 PMID:20951351 MGI:1926717 MGI:4420727 MGI:4839662 NCBI chr 1:223,142,859...223,241,333
Ensembl chr 1:223,142,859...223,241,333
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961|MGI:98371|MGI:98660|MGI:98957 (MGI:3639791|PMID:16700629) RGD PMID:16700629 MGI:3639791 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 IMP RGD PMID:7012206 RGD:9685140 NCBI chr15:41,972,482...41,976,690
Ensembl chr15:41,972,905...41,973,581
Ensembl chr15:41,972,905...41,973,581
JBrowse link
G Igf1r insulin-like growth factor 1 receptor acts_upstream_of_or_within ISO MGI:1926486 (MGI:2680871|PMID:14628051) RGD PMID:14628051 MGI:2680871 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Insr insulin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857204 (MGI:2680871|PMID:14628051)
Ensembl
RGD
PMID:14628051 GO_REF:0000107 MGI:2680871 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Insrr insulin receptor-related receptor acts_upstream_of_or_within ISO MGI:2653019 (MGI:2680871|PMID:14628051) RGD PMID:14628051 MGI:2680871 NCBI chr 2:173,255,335...173,274,800
Ensembl chr 2:173,255,414...173,274,800
JBrowse link
G LOC103694554 sex-determining region Y protein-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  Y:678,514...680,319
Ensembl chr  Y:679,687...680,196
JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2159321|MGI:98660 (MGI:2658696|PMID:12679814), (MGI:3580737|PMID:15944188)
Ensembl
RGD
PMID:12679814 PMID:15944188 GO_REF:0000107 MGI:2658696 MGI:3580737 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 involved_in ISO (PMID:10369247) RGD PMID:10369247 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Ptgdr prostaglandin D2 receptor acts_upstream_of_or_within ISO (MGI:3609509|PMID:16185683) RGD PMID:16185683 MGI:3609509 NCBI chr15:17,360,304...17,367,679
Ensembl chr15:17,360,304...17,367,679
JBrowse link
G Sf1 splicing factor 1 acts_upstream_of_or_within ISO MGI:94891 (MGI:3769860|PMID:17495005) RGD PMID:17495005 MGI:3769860 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5532793|PMID:23987514) RGD PMID:23987514 MGI:5532793 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:104723|MGI:98660 (MGI:3639791|PMID:16700629) RGD PMID:16700629 MGI:3639791 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Sry sex determining region Y acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
MGI:104723|MGI:1352460|MGI:98371 (MGI:3580945|PMID:15879091), (MGI:3639791|PMID:16700629)
(MGI:6471836|PMID:33004521)
PMID:21873635
RGD PMID:15879091 PMID:16700629 PMID:33004521 PMID:8430080 PMID:21873635 MGI:3580945 MGI:3639791 MGI:6471836, RGD:1598778, RGD:13792537
male somatic sex determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856319 (MGI:53651|PMID:5452809)
Ensembl
RGD
PMID:5452809 GO_REF:0000107 MGI:53651 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    reproductive process 1825
      developmental process involved in reproduction 1238
        sex determination 25
          female sex determination + 2
          germ-line sex determination + 3
          male sex determination + 17
          mating type determination + 0
          primary sex determination + 2
          processes downstream of sex determination signal + 0
          somatic sex determination + 2
Path 2
Term Annotations click to browse term
  biological_process 18734
    reproduction 1834
      reproductive process 1825
        developmental process involved in reproduction 1238
          sex determination 25
            female sex determination + 2
            germ-line sex determination + 3
            male sex determination + 17
            mating type determination + 0
            primary sex determination + 2
            processes downstream of sex determination signal + 0
            somatic sex determination + 2
paths to the root