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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle tissue development
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Accession:GO:0007519 term browser browse the term
Definition:The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.
Synonyms:related_synonym: myogenesis
 alt_id: GO:0048637



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skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP-binding cassette, sub-family C member 9 acts_upstream_of_or_within IMP (PMID:19675276) MGI PMID:19675276 NCBI chr 6:142,533,592...142,648,472
Ensembl chr 6:142,533,588...142,648,041
JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 acts_upstream_of_or_within IMP (PMID:32638637) MGI PMID:32638637 NCBI chr 1:53,383,776...53,391,911
Ensembl chr 1:53,364,666...53,391,826
Ensembl chr 1:53,364,666...53,391,826
JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit acts_upstream_of_or_within IMP (PMID:14300095), (PMID:14300096), (PMID:6500174), (PMID:7635187) MGI PMID:6500174 PMID:7635187 PMID:14300095 PMID:14300096 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560
JBrowse link
G Casq1 calsequestrin 1 involved_in ISO
IEA
RGD
Ensembl
PMID:8600158 GO_REF:0000107 RGD:2313254 NCBI chr 1:172,037,461...172,047,462
Ensembl chr 1:172,037,461...172,047,435
JBrowse link
G Cav1 caveolin 1, caveolae protein acts_upstream_of_or_within IMP (PMID:17200204) MGI PMID:17200204 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451
JBrowse link
G Ccnt2 cyclin T2 involved_in IDA (PMID:23060074) UniProt PMID:23060074 NCBI chr 1:127,701,901...127,732,574
Ensembl chr 1:127,701,901...127,735,798
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO
IDA
(PMID:9191048) RGD
MGI
PMID:9191048 PMID:15208659 RGD:1598429 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528
JBrowse link
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of IMP (PMID:15572127) MGI PMID:15572127 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948
JBrowse link
G Cfl2 cofilin 2, muscle involved_in IMP (PMID:24598388) UniProt PMID:24598388 NCBI chr12:54,905,602...54,910,065
Ensembl chr12:54,905,594...54,909,662
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in IMP (PMID:21364645) BHF-UCL PMID:21364645 NCBI chr 1:58,750,353...58,798,043
Ensembl chr 1:58,750,667...58,798,043
JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1, ubiquitous ISO RGD PMID:8086475 RGD:11565082 NCBI chr 2:121,188,257...121,194,218
Ensembl chr 2:121,188,195...121,194,218
JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 ISO RGD PMID:8086475 RGD:11565082 NCBI chr13:92,001,510...92,025,001
Ensembl chr13:92,001,506...92,025,004
JBrowse link
G Col19a1 collagen, type XIX, alpha 1 acts_upstream_of_or_within IMP (PMID:15302855) MGI PMID:15302855 NCBI chr 1:24,296,764...24,627,870
Ensembl chr 1:24,300,971...24,626,553
JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:19248115) MGI PMID:19248115 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:1389227 RGD:727559 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221
JBrowse link
G Ctsb cathepsin B ISO RGD PMID:16497156 RGD:1599532 NCBI chr14:63,359,911...63,383,372
Ensembl chr14:63,359,911...63,383,372
JBrowse link
G Dcn decorin ISO RGD PMID:17679144 RGD:2303553 NCBI chr10:97,315,362...97,354,025
Ensembl chr10:97,315,471...97,354,005
JBrowse link
G Dmd dystrophin, muscular dystrophy acts_upstream_of_or_within
involved_in
IMP
IBA
IGI
(PMID:16371353)
(PMID:12895031)
MGI
GO_Central
PMID:12895031 PMID:16371353 GO_REF:0000033 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747
JBrowse link
G Eln elastin acts_upstream_of_or_within IMP (PMID:14614988) MGI PMID:14614988 NCBI chr 5:134,731,449...134,776,300
Ensembl chr 5:134,731,447...134,776,177
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within IMP (PMID:14517256) MGI PMID:14517256 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:8846777 RGD:2289973 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:8846777 RGD:2289973 NCBI chr10:128,403,392...128,425,504
Ensembl chr10:128,403,392...128,425,521
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within IMP (PMID:28106121) MGI PMID:28106121 NCBI chr14:45,520,544...45,556,029
Ensembl chr14:45,520,544...45,556,228
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:27109613), (PMID:29625576) MGI PMID:27109613 PMID:29625576 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657
JBrowse link
G Flnb filamin, beta acts_upstream_of_or_within IDA (PMID:11807098) MGI PMID:11807098 NCBI chr14:14,518,185...14,651,852
Ensembl chr14:14,518,185...14,651,816
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within IGI (PMID:17428829) MGI PMID:17428829 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within IGI (PMID:17428829) MGI PMID:17428829 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976
JBrowse link
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 acts_upstream_of_or_within IMP (PMID:20576599) MGI PMID:20576599 NCBI chr 2:132,371,002...132,420,173
Ensembl chr 2:132,371,002...132,429,649
JBrowse link
G H19 H19, imprinted maternally expressed transcript ISO RGD PMID:7838525 RGD:2306191 NCBI chr 7:142,129,267...142,131,883
Ensembl chr 7:142,129,262...142,133,957
JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within IMP (PMID:8557196) MGI PMID:8557196 NCBI chr 1:184,459,340...184,464,690
Ensembl chr 1:184,459,337...184,464,816
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552
JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 acts_upstream_of_or_within IMP (PMID:29180785) MGI PMID:29180785 NCBI chr11:100,968,792...100,972,014
Ensembl chr11:100,969,237...100,971,353
JBrowse link
G Hspa8 heat shock protein 8 involved_in ISO
IEA
RGD
Ensembl
PMID:12909603 GO_REF:0000107 RGD:10059373 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383
JBrowse link
G Itga7 integrin alpha 7 ISO RGD PMID:1315319 RGD:70774 NCBI chr10:128,769,633...128,794,155
Ensembl chr10:128,769,645...128,794,155
JBrowse link
G Kcnab1 potassium voltage-gated channel, shaker-related subfamily, beta member 1 ISO RGD PMID:12652645 RGD:9743957 NCBI chr 3:64,856,636...65,285,643
Ensembl chr 3:64,856,617...65,285,644
JBrowse link
G Ldha lactate dehydrogenase A involved_in ISO RGD
GO_Central
PMID:6849973 GO_REF:0000096 RGD:1600284 NCBI chr 7:46,491,698...46,505,051
Ensembl chr 7:46,490,899...46,505,051
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within IMP (PMID:15890335) MGI PMID:15890335 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380
JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 acts_upstream_of_or_within IMP (PMID:16717059) MGI PMID:16717059 NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (PMID:17786239) MGI PMID:17786239 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within IMP (PMID:20610486) MGI PMID:20610486 NCBI chr12:109,506,879...109,538,163
Ensembl chr12:109,506,877...109,538,165
JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within IMP (PMID:10403250) MGI PMID:10403250 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Met met proto-oncogene acts_upstream_of_or_within IMP (PMID:7651534) MGI PMID:7651534 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979
JBrowse link
G Mettl21c methyltransferase 21C, AARS1 lysine acts_upstream_of_or_within IMP (PMID:24677265) MGI PMID:24677265 NCBI chr 1:44,048,559...44,081,745
Ensembl chr 1:44,048,568...44,059,194
JBrowse link
G Mettl8 methyltransferase 8, methylcytidine acts_upstream_of_or_within IDA (PMID:15992539) MGI PMID:15992539 NCBI chr 2:70,794,902...70,886,729
Ensembl chr 2:70,794,905...70,885,927
JBrowse link
G Mos Moloney sarcoma oncogene ISO RGD PMID:8395677 RGD:596933356 NCBI chr 4:3,870,658...3,872,105
Ensembl chr 4:3,870,657...3,872,105
JBrowse link
G Msc musculin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:14,823,570...14,826,216
Ensembl chr 1:14,823,570...14,826,216
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IGI
IMP
(PMID:8269513)
(PMID:19531352)
MGI PMID:8269513 PMID:19531352 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within IMP
IGI
TAS
(PMID:7588068)
(PMID:19531352)
(PMID:7720708)
(PMID:1846704)
MGI PMID:1846704 PMID:7588068 PMID:7720708 PMID:19531352 NCBI chr10:107,328,709...107,330,584
Ensembl chr10:107,328,714...107,330,598
JBrowse link
G Myh14 myosin, heavy polypeptide 14 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 7:44,255,227...44,320,296
Ensembl chr 7:44,255,227...44,320,267
JBrowse link
G Myhas myosin heavy chain gene antisense RNA involved_in IMP (PMID:28281528) MGI PMID:28281528 NCBI chr11:67,115,022...67,128,107
Ensembl chr11:67,102,082...67,128,720
JBrowse link
G Myl3 myosin, light polypeptide 3 ISO RGD PMID:2717409 RGD:633442 NCBI chr 9:110,592,746...110,598,870
Ensembl chr 9:110,570,929...110,598,866
JBrowse link
G Myl6 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle involved_in TAS (PMID:2304459) HGNC-UCL PMID:2304459 NCBI chr10:128,326,728...128,329,755
Ensembl chr10:128,326,729...128,330,014
JBrowse link
G Myl6b myosin, light polypeptide 6B involved_in TAS (PMID:2304459) HGNC-UCL PMID:2304459 NCBI chr10:128,330,026...128,334,554
Ensembl chr10:128,330,026...128,334,554
JBrowse link
G Mylpf myosin light chain, phosphorylatable, fast skeletal muscle involved_in ISO
IBA
IMP
(PMID:17356007) RGD
GO_Central
BHF-UCL
PMID:6179945 PMID:17356007 GO_REF:0000033 RGD:633441 NCBI chr 7:126,808,071...126,813,459
Ensembl chr 7:126,808,062...126,813,470
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within IGI
TAS
IDA
IMP
(PMID:12895031)
(PMID:1846704)
(PMID:8269513)
(PMID:12037571), (PMID:14762206)
(PMID:19531352)
MGI PMID:1846704 PMID:8269513 PMID:12037571 PMID:12895031 PMID:14762206 More... NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523
JBrowse link
G Myog myogenin acts_upstream_of_or_within TAS
IDA
(PMID:1846704)
(PMID:14762206)
MGI PMID:1846704 PMID:14762206 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Myoz1 myozenin 1 involved_in IMP (PMID:18846255) BHF-UCL PMID:18846255 NCBI chr14:20,699,170...20,706,608
Ensembl chr14:20,699,175...20,706,608
JBrowse link
G Myoz2 myozenin 2 involved_in IDA (PMID:15543153) BHF-UCL PMID:15543153 NCBI chr 3:122,799,855...122,828,649
Ensembl chr 3:122,799,855...122,828,664
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO RGD PMID:9839950 RGD:5688344 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367
JBrowse link
G Neurl1a neuralized E3 ubiquitin protein ligase 1A involved_in ISO
IEA
RGD
Ensembl
PMID:12213446 GO_REF:0000107 RGD:2302390 NCBI chr19:47,167,259...47,247,880
Ensembl chr19:47,167,259...47,247,880
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:7926784) MGI PMID:7926784 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:26923583) MGI PMID:26923583 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nphs1 nephrosis 1, nephrin involved_in IMP (PMID:19470472) UniProt PMID:19470472 NCBI chr 7:30,157,259...30,188,048
Ensembl chr 7:30,157,740...30,186,648
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within IMP (PMID:16251273) MGI PMID:16251273 NCBI chr 7:70,001,694...70,016,494
Ensembl chr 7:70,001,692...70,016,483
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within IMP (PMID:11030621) MGI PMID:11030621 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839
JBrowse link
G Pdlim3 PDZ and LIM domain 3 NOT|acts_upstream_of_or_within IMP (PMID:11238905) MGI PMID:11238905 NCBI chr 8:46,338,524...46,372,672
Ensembl chr 8:46,338,498...46,372,585
JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:10572050) MGI PMID:10572050 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
JBrowse link
G Plec plectin involved_in IMP (PMID:9389647) MGI PMID:9389647 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
G Popdc1 popeye domain cAMP effector 1 involved_in IBA
ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr10:45,211,783...45,248,580
Ensembl chr10:45,211,868...45,248,575
JBrowse link
G Popdc2 popeye domain containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:38,182,523...38,198,578
Ensembl chr16:38,182,571...38,198,578
JBrowse link
G Popdc3 popeye domain containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:45,165,401...45,194,546
Ensembl chr10:45,054,194...45,194,548
JBrowse link
G Psma6 proteasome subunit alpha 6 involved_in NAS (PMID:10852819) BHF-UCL PMID:10852819 NCBI chr12:55,431,007...55,465,244
Ensembl chr12:55,431,007...55,465,239
JBrowse link
G Rcan1 regulator of calcineurin 1 ISO RGD PMID:15219871 RGD:1304341 NCBI chr16:92,188,839...92,263,057
Ensembl chr16:92,188,841...92,267,755
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within IDA (PMID:11877460) MGI PMID:11877460 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133
JBrowse link
G Rtl1 retrotransposon Gaglike 1 involved_in
acts_upstream_of_or_within
IMP
IDA
(PMID:32878913) MGI PMID:32878913 NCBI chr12:109,531,141...109,570,852
Ensembl chr12:109,555,627...109,566,764
JBrowse link
G Rxrg retinoid X receptor gamma ISO RGD PMID:9389449 RGD:633976 NCBI chr 1:167,425,902...167,467,191
Ensembl chr 1:167,425,953...167,467,192
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within IMP (PMID:28106121) MGI PMID:28106121 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477
JBrowse link
G Sgce sarcoglycan, epsilon ISO RGD PMID:14625080 RGD:1303966 NCBI chr 6:4,674,350...4,747,180
Ensembl chr 6:4,674,350...4,747,207
JBrowse link
G Shh sonic hedgehog acts_upstream_of IMP (PMID:11171399) MGI PMID:11171399 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sin3b transcriptional regulator, SIN3B (yeast) involved_in IDA (PMID:10620510) UniProt PMID:10620510 NCBI chr 8:73,449,898...73,484,831
Ensembl chr 8:73,449,913...73,484,829
JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within
involved_in
IGI
IMP
(PMID:15788460)
(PMID:17592144)
MGI
UniProt
PMID:15788460 PMID:17592144 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within
involved_in
IGI
IMP
(PMID:15788460)
(PMID:17592144)
MGI
UniProt
PMID:15788460 PMID:17592144 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230
JBrowse link
G Skil SKI-like involved_in ISO GO_Central GO_REF:0000119 NCBI chr 3:31,149,259...31,176,741
Ensembl chr 3:31,149,207...31,176,726
JBrowse link
G Srpk3 serine/arginine-rich protein specific kinase 3 acts_upstream_of_or_within IMP (PMID:16140986) MGI PMID:16140986 NCBI chr  X:72,818,011...72,822,531
Ensembl chr  X:72,818,011...72,822,531
JBrowse link
G Svil supervillin involved_in ISO GO_Central GO_REF:0000119 NCBI chr18:4,920,497...5,119,290
Ensembl chr18:4,920,540...5,119,299
JBrowse link
G Synb syncytin b acts_upstream_of_or_within IMP (PMID:27589388) MGI PMID:27589388 NCBI chr14:69,527,827...69,549,857
Ensembl chr14:69,526,793...69,531,748
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO GO_Central GO_REF:0000119 NCBI chr  X:73,325,498...73,340,182
Ensembl chr  X:73,325,518...73,333,757
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within TAS (PMID:1436033) MGI PMID:1436033 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO RGD PMID:16439574 RGD:2302095 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
JBrowse link
G Vamp5 vesicle-associated membrane protein 5 acts_upstream_of_or_within IDA (PMID:9725904) MGI PMID:9725904 NCBI chr 6:72,345,032...72,357,451
Ensembl chr 6:72,345,777...72,357,451
JBrowse link
G Vgll2 vestigial like family member 2 acts_upstream_of_or_within IDA (PMID:14762206) MGI PMID:14762206 NCBI chr10:51,898,598...51,904,567
Ensembl chr10:51,898,598...51,904,567
JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:11403940) MGI PMID:11403940 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136
JBrowse link
G Vrk3 vaccinia related kinase 3 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 7:44,398,049...44,426,939
Ensembl chr 7:44,397,837...44,426,939
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 involved_in IMP (PMID:20059953) UniProt PMID:20059953 NCBI chr 1:177,269,892...177,278,330
Ensembl chr 1:177,269,917...177,278,330
JBrowse link
branchiomeric skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msc musculin involved_in IGI (PMID:12493912) UniProt PMID:12493912 NCBI chr 1:14,823,570...14,826,216
Ensembl chr 1:14,823,570...14,826,216
JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within IMP (PMID:17384148) MGI PMID:17384148 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005
JBrowse link
G Tcf21 transcription factor 21 involved_in IGI (PMID:12493912) UniProt PMID:12493912 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit acts_upstream_of_or_within IMP (PMID:14618389) MGI PMID:14618389 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 9:98,837,495...98,840,601
Ensembl chr 9:98,837,341...98,840,596
JBrowse link
G Myh15 myosin, heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chr16:48,877,763...49,019,926
Ensembl chr16:48,877,849...49,019,467
JBrowse link
G Myom1 myomesin 1 involved_in ISO
IEA
RGD
Ensembl
PMID:12878677 GO_REF:0000107 RGD:633368 NCBI chr17:71,326,455...71,433,851
Ensembl chr17:71,309,628...71,433,851
JBrowse link
G Myom2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chr 8:15,107,653...15,183,410
Ensembl chr 8:15,107,653...15,183,541
JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:16638982)
(PMID:21035439)
MGI PMID:16638982 PMID:21035439 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
JBrowse link
negative regulation of satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin1 akirin 1 involved_in IMP (PMID:18255059) UniProt PMID:18255059 NCBI chr 4:123,628,988...123,644,092
Ensembl chr 4:123,628,352...123,644,138
JBrowse link
G Ephb1 Eph receptor B1 involved_in IMP (PMID:27446912) UniProt PMID:27446912 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892
JBrowse link
G Mstn myostatin involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:53,100,799...53,107,238
Ensembl chr 1:53,100,799...53,107,238
JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (PMID:20696153) UniProt PMID:20696153 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230
JBrowse link
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir669a-1 microRNA 669a-1 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,481,664...10,481,760
Ensembl chr 2:10,481,664...10,481,760
JBrowse link
G Mir669a-10 microRNA 669a-10 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,503,722...10,503,808
Ensembl chr 2:10,503,722...10,503,808
JBrowse link
G Mir669a-2 microRNA 669a-2 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,514,975...10,515,071
Ensembl chr 2:10,514,975...10,515,071
JBrowse link
G Mir669a-3 microRNA 669a-3 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,479,244...10,479,352
Ensembl chr 2:10,479,244...10,479,352
JBrowse link
G Mir669a-4 microRNA 669a-4 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,484,126...10,484,212
Ensembl chr 2:10,484,126...10,484,212
JBrowse link
G Mir669a-5 microRNA 669a-5 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,486,572...10,486,658
Ensembl chr 2:10,486,572...10,486,658
JBrowse link
G Mir669a-6 microRNA 669a-6 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,489,007...10,489,093
Ensembl chr 2:10,489,007...10,489,093
JBrowse link
G Mir669a-7 microRNA 669a-7 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,491,464...10,491,550
Ensembl chr 2:10,491,464...10,491,550
JBrowse link
G Mir669a-8 microRNA 669a-8 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,496,377...10,496,463
Ensembl chr 2:10,496,377...10,496,463
JBrowse link
G Mir669a-9 microRNA 4669a-9 acts_upstream_of_or_within IDA (PMID:21708977) MGI PMID:21708977 NCBI chr 2:10,498,839...10,498,925
Ensembl chr 2:10,498,839...10,498,925
JBrowse link
G Myocd myocardin involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr11:65,064,434...65,160,821
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G S100b S100 protein, beta polypeptide, neural involved_in ISO RGD
GO_Central
PMID:20069545 GO_REF:0000096 RGD:5508829 NCBI chr10:76,089,670...76,097,153
Ensembl chr10:76,089,687...76,096,993
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras neuroblastoma ras oncogene acts_upstream_of_or_within IDA
IGI
(PMID:20534588) MGI PMID:20534588 NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IDA (PMID:7664846), (PMID:7958419) MGI PMID:7664846 PMID:7958419 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IMP (PMID:21971047) UniProt PMID:21971047 NCBI chr 9:108,367,806...108,379,536
Ensembl chr 9:108,367,801...108,379,536
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 9:43,978,318...44,006,924
Ensembl chr 9:43,978,318...44,006,924
JBrowse link
G Ybx3 Y box protein 3 acts_upstream_of_or_within IDA (PMID:18676817) MGI PMID:18676817 NCBI chr 6:131,341,821...131,365,413
Ensembl chr 6:131,341,818...131,365,439
JBrowse link
negative regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mstn myostatin involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:11877467), (PMID:21390326), (PMID:24076600), (PMID:9139826)
(PMID:18286185)
RGD
GO_Central
UniProt
MGI
PMID:9139826 PMID:11877467 PMID:16575154 PMID:18286185 PMID:21390326 More... GO_REF:0000096 GO_REF:0000119 RGD:1601299 NCBI chr 1:53,100,799...53,107,238
Ensembl chr 1:53,100,799...53,107,238
JBrowse link
G Tll2 tolloid-like 2 acts_upstream_of_or_within IMP (PMID:18286185) MGI PMID:18286185 NCBI chr19:41,069,379...41,199,287
Ensembl chr19:41,071,192...41,195,274
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein-like 1 involved_in IMP (PMID:28370195) MGI PMID:28370195 NCBI chr11:101,065,429...101,081,550
Ensembl chr11:101,061,349...101,081,550
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:28370195) MGI PMID:28370195 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within IMP (PMID:25014022) MGI PMID:25014022 NCBI chr11:63,019,808...63,050,373
Ensembl chr11:63,019,808...63,050,373
JBrowse link
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in IMP (PMID:23525013) UniProt PMID:23525013 NCBI chr 7:112,777,820...112,913,333
Ensembl chr 7:112,806,672...112,913,333
JBrowse link
G Gpc1 glypican 1 involved_in IEP (PMID:20100867) UniProt PMID:20100867 NCBI chr 1:92,759,367...92,787,933
Ensembl chr 1:92,759,367...92,788,501
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO GO_Central GO_REF:0000119 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within IMP (PMID:24532688) MGI PMID:24532688 NCBI chr 7:142,130,801...142,130,884
Ensembl chr 7:142,130,801...142,130,884
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (PMID:18178581) UniProt PMID:18178581 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:11146504) MGI PMID:11146504 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 6:97,215,491...97,230,137
Ensembl chr 6:97,215,495...97,229,720
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:107,328,709...107,330,584
Ensembl chr10:107,328,714...107,330,598
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523
JBrowse link
G Myog myogenin involved_in IBA
IMP
(PMID:8393145) GO_Central
UniProt
PMID:8393145 GO_REF:0000033 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Shox2 SHOX homeobox 2 involved_in IMP (PMID:21156168) BHF-UCL PMID:21156168 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in IMP (PMID:25313962) UniProt PMID:25313962 NCBI chr13:46,571,664...46,584,575
Ensembl chr13:46,571,910...46,584,571
JBrowse link
positive regulation of skeletal muscle satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat8 K(lysine) acetyltransferase 8 involved_in IDA (PMID:34059674) UniProt PMID:34059674 NCBI chr 7:127,511,689...127,525,010
Ensembl chr 7:127,511,688...127,525,009
JBrowse link
G Mcub mitochondrial calcium uniporter dominant negative beta subunit involved_in IMP (PMID:34726954) UniProt PMID:34726954 NCBI chr 3:129,708,609...129,763,850
Ensembl chr 3:129,708,609...129,763,855
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (PMID:15572127) MGI PMID:15572127 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (PMID:23460868) CACAO PMID:23460868 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Flot1 flotillin 1 involved_in ISO
IMP
(PMID:24046456) GO_Central
UniProt
PMID:24046456 GO_REF:0000119 NCBI chr17:36,134,243...36,143,674
Ensembl chr17:36,134,122...36,143,683
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase involved_in ISO RGD
GO_Central
PMID:19388010 GO_REF:0000096 RGD:2317940 NCBI chr13:96,785,470...96,807,444
Ensembl chr13:96,785,475...96,807,444
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within IGI
IMP
(PMID:20534588) MGI PMID:20534588 NCBI chr 1:162,050,937...162,051,046
Ensembl chr 1:162,050,937...162,051,046
JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit acts_upstream_of_or_within IMP (PMID:23926128) MGI PMID:23926128 NCBI chr15:5,172,641...5,211,380
Ensembl chr15:5,173,343...5,211,380
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:11171399) MGI PMID:11171399 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 9:43,978,318...44,006,924
Ensembl chr 9:43,978,318...44,006,924
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IMP (PMID:11856745) CACAO PMID:11856745 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (PMID:18178581), (PMID:24234654) UniProt PMID:18178581 PMID:24234654 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937
JBrowse link
G Adrb2 adrenergic receptor, beta 2 involved_in ISO RGD
GO_Central
PMID:16177600 GO_REF:0000096 RGD:1598747 NCBI chr18:62,310,784...62,313,052
Ensembl chr18:62,310,887...62,313,030
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (PMID:25220152) UniProt PMID:25220152 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IMP (PMID:29440408) UniProt PMID:29440408 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 acts_upstream_of_or_within IMP (PMID:23695157) MGI PMID:23695157 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:16408196 GO_REF:0000096 GO_REF:0000107 RGD:1643018 NCBI chr11:86,389,695...86,435,711
Ensembl chr11:86,389,697...86,435,631
JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IMP (PMID:18816858) UniProt PMID:18816858 NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890
JBrowse link
G Tbx1 T-box 1 involved_in IMP (PMID:18816858) UniProt PMID:18816858 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
JBrowse link
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx17 DEAD box helicase 17 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr15:79,411,897...79,430,976
Ensembl chr15:79,411,937...79,430,942
JBrowse link
G Ddx5 DEAD box helicase 5 involved_in IMP (PMID:17011493) UniProt PMID:17011493 NCBI chr11:106,671,181...106,680,011
Ensembl chr11:106,671,181...106,680,011
JBrowse link
G Klhl41 kelch-like 41 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:22562206) MGI
GO_Central
PMID:22562206 GO_REF:0000033 NCBI chr 2:69,500,464...69,514,583
Ensembl chr 2:69,500,464...69,514,574
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in IMP (PMID:15623503) UniProt PMID:15623503 NCBI chr14:4,230,549...4,265,639
Ensembl chr14:4,230,569...4,265,642
JBrowse link
G Rbfox1 RNA binding protein, fox-1 homolog (C. elegans) 1 acts_upstream_of_or_within IMP (PMID:23300487) MGI PMID:23300487 NCBI chr16:5,702,566...7,230,344
Ensembl chr16:5,124,665...7,229,391
JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IDA (PMID:20696153) UniProt PMID:20696153 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in IMP (PMID:22363741) UniProt PMID:22363741 NCBI chr17:27,341,639...27,352,865
Ensembl chr17:27,341,637...27,352,890
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:19319192) GO_Central
MGI
PMID:19319192 GO_REF:0000033 NCBI chr 9:55,116,219...55,131,717
Ensembl chr 9:55,116,209...55,131,717
JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within IGI (PMID:17786239) MGI PMID:17786239 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within IGI (PMID:17786239) MGI PMID:17786239 NCBI chr11:102,085,244...102,120,968
Ensembl chr11:102,085,258...102,120,992
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within IGI (PMID:17786239) MGI PMID:17786239 NCBI chr12:34,097,579...34,967,094
Ensembl chr12:34,097,579...34,967,094
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within IGI (PMID:17786239) MGI PMID:17786239 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within IGI (PMID:17786239) MGI PMID:17786239 NCBI chr11:102,085,244...102,120,968
Ensembl chr11:102,085,258...102,120,992
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within IGI (PMID:17786239) MGI PMID:17786239 NCBI chr12:34,097,579...34,967,094
Ensembl chr12:34,097,579...34,967,094
JBrowse link
G Nln neurolysin (metallopeptidase M3 family) acts_upstream_of_or_within IMP (PMID:24719333) MGI PMID:24719333 NCBI chr13:104,159,558...104,246,170
Ensembl chr13:104,159,565...104,246,122
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169
JBrowse link
G Megf10 multiple EGF-like-domains 10 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr18:57,266,162...57,430,539
Ensembl chr18:57,266,162...57,430,539
JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (PMID:21177349) MGI PMID:21177349 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086
JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IMP (PMID:15673614) MGI PMID:15673614 NCBI chr15:98,668,593...98,676,093
Ensembl chr15:98,668,593...98,676,031
JBrowse link
regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (PMID:17194759) UniProt PMID:17194759 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr19:36,089,365...36,097,244
Ensembl chr19:36,089,361...36,097,499
JBrowse link
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr19:42,024,358...42,033,550
Ensembl chr19:42,024,439...42,033,549
JBrowse link
G Ankrd33 ankyrin repeat domain 33 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr15:101,013,625...101,017,923
Ensembl chr15:101,013,636...101,017,921
JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr12:103,287,401...103,322,260
Ensembl chr12:103,287,401...103,322,260
JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 1:190,902,493...190,915,530
Ensembl chr 1:190,902,493...190,950,236
JBrowse link
G Barx2 BarH-like homeobox 2 acts_upstream_of_or_within IMP (PMID:12486129) MGI PMID:12486129 NCBI chr 9:31,757,340...31,824,581
Ensembl chr 9:31,757,340...31,824,758
JBrowse link
G Bcl9 B cell CLL/lymphoma 9 acts_upstream_of_or_within IGI (PMID:19699733) MGI PMID:19699733 NCBI chr 3:97,110,974...97,205,718
Ensembl chr 3:97,110,978...97,205,233
JBrowse link
G Bcl9l B cell CLL/lymphoma 9-like acts_upstream_of_or_within IGI (PMID:19699733) MGI PMID:19699733 NCBI chr 9:44,394,103...44,423,203
Ensembl chr 9:44,394,122...44,423,193
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 1:134,002,603...134,006,893
Ensembl chr 1:134,002,908...134,006,858
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422
JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 2:125,672,222...125,701,002
Ensembl chr 2:125,672,224...125,701,059
JBrowse link
G Dmrta2 doublesex and mab-3 related transcription factor like family A2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 4:109,835,222...109,840,896
Ensembl chr 4:109,835,250...109,840,884
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO RGD PMID:16682826 RGD:10401256 NCBI chr10:81,012,465...81,018,343
Ensembl chr10:81,012,465...81,018,332
JBrowse link
G Egr1 early growth response 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037
JBrowse link
G Egr2 early growth response 2 acts_upstream_of_or_within
involved_in
IMP (PMID:22147266)
(PMID:11509834)
MGI
UniProt
PMID:11509834 PMID:22147266 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018
JBrowse link
G Emd emerin acts_upstream_of_or_within IMP
IGI
(PMID:19720741) MGI PMID:19720741 NCBI chr  X:73,298,297...73,305,188
Ensembl chr  X:73,298,293...73,305,154
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200
JBrowse link
G Fos FBJ osteosarcoma oncogene acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr12:85,520,664...85,524,048
Ensembl chr12:85,520,664...85,524,047
JBrowse link
G Foxn2 forkhead box N2 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr17:88,746,430...88,797,961
Ensembl chr17:88,748,139...88,797,961
JBrowse link
G Gata4 GATA binding protein 4 involved_in NAS (PMID:21556048) UniProt PMID:21556048 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141
JBrowse link
G Gm34220 predicted gene, 34220 involved_in IDA
IMP
(PMID:26658965) MGI PMID:26658965 NCBI chr12:108,744,781...108,758,647
Ensembl chr12:108,755,961...108,758,669
Ensembl chr12:108,755,961...108,758,669
JBrowse link
G Gtf3c5 general transcription factor IIIC, polypeptide 5 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 2:28,456,257...28,473,291
Ensembl chr 2:28,456,323...28,473,763
JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668
JBrowse link
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 4:119,590,982...119,992,608
Ensembl chr 4:119,590,981...119,995,242
JBrowse link
G Hlf hepatic leukemia factor acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr11:90,227,361...90,281,745
Ensembl chr11:90,227,362...90,281,721
JBrowse link
G Hmg20b high mobility group 20B acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr10:81,181,880...81,186,777
Ensembl chr10:81,181,882...81,186,314
JBrowse link
G Klf5 Kruppel-like transcription factor 5 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr14:99,536,127...99,550,848
Ensembl chr14:99,536,127...99,552,472
JBrowse link
G Klhl41 kelch-like 41 involved_in IDA (PMID:22562206) UniProt PMID:22562206 NCBI chr 2:69,500,464...69,514,583
Ensembl chr 2:69,500,464...69,514,574
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog acts_upstream_of_or_within IGI (PMID:15542848) MGI PMID:15542848 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lemd2 LEM domain containing 2 acts_upstream_of_or_within ISO
IMP
(PMID:19720741) MGI PMID:19720741 GO_REF:0000008 NCBI chr17:27,408,574...27,426,228
Ensembl chr17:27,408,574...27,423,443
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within IMP (PMID:19720741) MGI PMID:19720741 NCBI chr10:120,759,316...120,815,491
Ensembl chr10:120,759,318...120,815,237
JBrowse link
G Maff v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr15:79,230,813...79,243,278
Ensembl chr15:79,230,821...79,243,276
JBrowse link
G Med20 mediator complex subunit 20 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr17:47,922,510...47,935,176
Ensembl chr17:47,922,507...47,935,343
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within
involved_in
IMP
NAS
(PMID:22147266)
(PMID:21556048)
MGI
UniProt
PMID:21556048 PMID:22147266 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Mef2d myocyte enhancer factor 2D acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 3:88,049,248...88,079,398
Ensembl chr 3:88,049,679...88,079,393
JBrowse link
G Myc myelocytomatosis oncogene acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:22147266) MGI
GO_Central
PMID:22147266 GO_REF:0000033 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:22147266) MGI
GO_Central
PMID:22147266 GO_REF:0000033 NCBI chr10:107,328,709...107,330,584
Ensembl chr10:107,328,714...107,330,598
JBrowse link
G Mylk2 myosin, light polypeptide kinase 2, skeletal muscle involved_in ISO
NAS
(PMID:21556048) GO_Central
UniProt
PMID:21556048 GO_REF:0000119 NCBI chr 2:152,753,265...152,764,985
Ensembl chr 2:152,753,272...152,764,988
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IDA
IBA
NAS
IMP
(PMID:26658965)
(PMID:21556048)
(PMID:22147266)
MGI
GO_Central
UniProt
PMID:21556048 PMID:22147266 PMID:26658965 GO_REF:0000033 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523
JBrowse link
G Myog myogenin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) ISO RGD PMID:16723531 RGD:1580249 NCBI chr11:95,459,644...95,478,524
Ensembl chr11:95,459,644...95,478,561
JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr15:101,151,783...101,172,676
Ensembl chr15:101,152,150...101,172,676
JBrowse link
G Nupr1 nuclear protein transcription regulator 1 acts_upstream_of_or_within IMP (PMID:19723804) MGI PMID:19723804 NCBI chr 7:126,222,418...126,224,642
Ensembl chr 7:126,222,421...126,230,033
JBrowse link
G Pax3 paired box 3 involved_in NAS (PMID:21556048) UniProt PMID:21556048 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 4:44,524,748...44,710,694
Ensembl chr 4:44,524,757...44,710,487
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 5:67,251,751...67,256,399
Ensembl chr 5:67,251,742...67,256,644
JBrowse link
G Plagl1 pleiomorphic adenoma gene-like 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr10:12,966,576...13,007,438
Ensembl chr10:12,936,248...13,007,438
JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within IMP
IGI
(PMID:22147266)
(PMID:15542848)
MGI PMID:15542848 PMID:22147266 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Sap30 sin3 associated polypeptide acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 8:57,935,740...57,940,874
Ensembl chr 8:57,935,741...57,940,894
JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658
JBrowse link
G Smyd1 SET and MYND domain containing 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 6:71,190,924...71,239,265
Ensembl chr 6:71,190,924...71,299,217
JBrowse link
G Snw1 SNW domain containing 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 acts_upstream_of_or_within IMP (PMID:20847309) MGI PMID:20847309 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IGI (PMID:19699733) MGI PMID:19699733 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578
JBrowse link
G Zfp689 zinc finger protein 689 acts_upstream_of_or_within IMP (PMID:22147266) MGI PMID:22147266 NCBI chr 7:127,041,308...127,048,330
Ensembl chr 7:127,041,308...127,048,330
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in IDA (PMID:2731651) UniProt PMID:2731651 NCBI chr 8:124,618,497...124,621,514
Ensembl chr 8:124,618,508...124,621,490
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of IMP (PMID:11146504) MGI PMID:11146504 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within IMP (PMID:23872330) MGI PMID:23872330 NCBI chr14:70,337,538...70,375,413
Ensembl chr14:70,337,554...70,375,655
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in IMP (PMID:30735131) MGI PMID:30735131 NCBI chr19:8,814,831...8,826,047
Ensembl chr19:8,814,831...8,826,047
JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit acts_upstream_of_or_within IMP
IDA
(PMID:289331), (PMID:8462749)
(PMID:8143864)
MGI PMID:289331 PMID:8143864 PMID:8462749 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560
JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within IMP (PMID:17200204) MGI PMID:17200204 NCBI chr 6:17,281,184...17,289,129
Ensembl chr 6:17,281,184...17,289,114
JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:21037586) MGI PMID:21037586 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002
JBrowse link
G Dner delta/notch-like EGF repeat containing acts_upstream_of_or_within IDA (PMID:15965470) MGI PMID:15965470 NCBI chr 1:84,347,560...84,673,942
Ensembl chr 1:84,347,560...84,673,942
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within IMP (PMID:16962942) MGI PMID:16962942 NCBI chr 9:108,216,279...108,217,541
Ensembl chr 9:108,216,102...108,217,542
JBrowse link
G Homer1 homer scaffolding protein 1 acts_upstream_of_or_within IMP (PMID:18268005) MGI PMID:18268005 NCBI chr13:93,440,265...93,549,471
Ensembl chr13:93,436,143...93,541,637
JBrowse link
G Hottip Hoxa distal transcript antisense RNA acts_upstream_of_or_within IMP (PMID:25909911) MGI PMID:25909911 NCBI chr 6:52,239,760...52,244,588
Ensembl chr 6:52,239,760...52,244,588
JBrowse link
G Kel Kell blood group acts_upstream_of_or_within IGI (PMID:24405768) MGI PMID:24405768 NCBI chr 6:41,663,263...41,681,268
Ensembl chr 6:41,663,264...41,681,273
JBrowse link
G Klhl40 kelch-like 40 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:25940086)
(PMID:24960163)
GO_Central
UniProt
MGI
PMID:24960163 PMID:25940086 GO_REF:0000033 NCBI chr 9:121,606,673...121,612,885
Ensembl chr 9:121,606,673...121,612,884
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:16111892) MGI PMID:16111892 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168
JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in IMP (PMID:25774500), (PMID:26035871) UniProt PMID:25774500 PMID:26035871 NCBI chr 6:97,215,491...97,230,137
Ensembl chr 6:97,215,495...97,229,720
JBrowse link
G Lncpint long non-protein coding RNA, Trp53 induced transcript involved_in IMP (PMID:25909911) MGI PMID:25909911 NCBI chr 6:31,070,498...31,195,409
Ensembl chr 6:31,059,500...31,197,607
JBrowse link
G Myhas myosin heavy chain gene antisense RNA involved_in IMP
IDA
(PMID:28281528) MGI PMID:28281528 NCBI chr11:67,115,022...67,128,107
Ensembl chr11:67,102,082...67,128,720
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within IMP (PMID:19319192) MGI PMID:19319192 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523
JBrowse link
G Myog myogenin acts_upstream_of_or_within IMP (PMID:8393145) MGI PMID:8393145 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Myoparr myogenin promoter-associated myogenic regulatory antisense lncRNA acts_upstream_of_or_within IMP (PMID:30622218) MGI PMID:30622218 NCBI chr 1:134,216,333...134,217,499 JBrowse link
G Myorg myogenesis regulating glycosidase (putative) acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
(PMID:19706595) MGI
GO_Central
PMID:19706595 GO_REF:0000033 GO_REF:0000119 NCBI chr 4:41,495,601...41,503,132
Ensembl chr 4:41,495,604...41,503,076
JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 acts_upstream_of_or_within IMP (PMID:11254352) MGI PMID:11254352 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169
JBrowse link
G Norad non-coding RNA activated by DNA damage involved_in IMP (PMID:30735131) MGI PMID:30735131 NCBI chr 2:156,229,983...156,234,899
Ensembl chr 2:156,229,977...156,234,978
JBrowse link
G P2rx2 purinergic receptor P2X, ligand-gated ion channel, 2 acts_upstream_of_or_within IMP (PMID:17706883) MGI PMID:17706883 NCBI chr 5:110,487,678...110,491,186
Ensembl chr 5:110,487,678...110,491,078
JBrowse link
G Plec plectin involved_in IMP (PMID:18490514)
(PMID:24487589)
MGI PMID:18490514 PMID:24487589 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform acts_upstream_of_or_within
involved_in
IMP (PMID:16024798)
(PMID:12773574)
MGI
UniProt
PMID:12773574 PMID:16024798 NCBI chr 3:136,375,778...136,643,488
Ensembl chr 3:136,375,885...136,643,488
JBrowse link
G Ppp3cb protein phosphatase 3, catalytic subunit, beta isoform involved_in IMP (PMID:12773574) UniProt PMID:12773574 NCBI chr14:20,549,432...20,596,641
Ensembl chr14:20,549,432...20,596,641
JBrowse link
G Rcan1 regulator of calcineurin 1 acts_upstream_of_or_within IDA (PMID:16024798) MGI PMID:16024798 NCBI chr16:92,188,839...92,263,057
Ensembl chr16:92,188,841...92,267,755
JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle involved_in IMP (PMID:18003898) UniProt PMID:18003898 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:23325319) MGI
GO_Central
PMID:23325319 GO_REF:0000033 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477
JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:9284043) MGI PMID:9284043 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:22987639) MGI PMID:22987639 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
JBrowse link
G Spg11 SPG11, spatacsin vesicle trafficking associated acts_upstream_of_or_within IMP (PMID:28237315) MGI PMID:28237315 NCBI chr 2:121,884,001...121,949,915
Ensembl chr 2:121,884,001...121,948,867
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within IMP (PMID:23626854) MGI PMID:23626854 NCBI chr10:127,337,505...127,344,692
Ensembl chr10:127,337,555...127,344,692
JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IMP (PMID:15673614) MGI PMID:15673614 NCBI chr15:98,668,593...98,676,093
Ensembl chr15:98,668,593...98,676,031
JBrowse link
G Xk X-linked Kx blood group acts_upstream_of_or_within IGI (PMID:24405768) MGI PMID:24405768 NCBI chr  X:9,139,023...9,179,484
Ensembl chr  X:9,138,995...9,179,489
JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 acts_upstream_of_or_within IDA (PMID:27561302) MGI PMID:27561302 NCBI chr11:95,754,385...95,805,786
Ensembl chr11:95,756,769...95,805,717
JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IGI (PMID:19293339) MGI PMID:19293339 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:27561302) MGI PMID:27561302 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657
JBrowse link
G Fktn fukutin acts_upstream_of_or_within IMP (PMID:25661440) MGI PMID:25661440 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890
JBrowse link
G Klhl40 kelch-like 40 acts_upstream_of_or_within
involved_in
IMP (PMID:24361185)
(PMID:25940086)
MGI
UniProt
PMID:24361185 PMID:25940086 NCBI chr 9:121,606,673...121,612,885
Ensembl chr 9:121,606,673...121,612,884
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP
IDA
(PMID:25661440) MGI PMID:25661440 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168
JBrowse link
G Ppif peptidylprolyl isomerase F (cyclophilin F) acts_upstream_of_or_within IGI (PMID:19293339) MGI PMID:19293339 NCBI chr14:25,693,998...25,700,892
Ensembl chr14:25,694,578...25,700,892
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:15238161) MGI PMID:15238161 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (PMID:21884692) UniProt PMID:21884692 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230
JBrowse link
skeletal muscle satellite cell commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax7 paired box 7 acts_upstream_of_or_within IMP (PMID:11030621) MGI PMID:11030621 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839
JBrowse link
skeletal muscle satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (PMID:15572127) MGI PMID:15572127 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948
JBrowse link
G Klf5 Kruppel-like transcription factor 5 acts_upstream_of_or_within IMP (PMID:27743478) MGI PMID:27743478 NCBI chr14:99,536,127...99,550,848
Ensembl chr14:99,536,127...99,552,472
JBrowse link
G Megf10 multiple EGF-like-domains 10 involved_in IMP
ISO
(PMID:18056409) UniProt
GO_Central
PMID:18056409 GO_REF:0000119 NCBI chr18:57,266,162...57,430,539
Ensembl chr18:57,266,162...57,430,539
JBrowse link
G Mstn myostatin involved_in IMP (PMID:26923583) MGI PMID:26923583 NCBI chr 1:53,100,799...53,107,238
Ensembl chr 1:53,100,799...53,107,238
JBrowse link
G Mylk2 myosin, light polypeptide kinase 2, skeletal muscle involved_in IMP (PMID:21556048) UniProt PMID:21556048 NCBI chr 2:152,753,265...152,764,985
Ensembl chr 2:152,753,272...152,764,988
JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:26923583) MGI PMID:26923583 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Pax7 paired box 7 involved_in IDA (PMID:34059674) UniProt PMID:34059674 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within IMP (PMID:21131290) MGI PMID:21131290 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477
JBrowse link
G Snhg15 small nucleolar RNA host gene 15 acts_upstream_of_or_within IMP (PMID:32483152) MGI PMID:32483152 NCBI chr11:6,475,591...6,478,760
Ensembl chr11:6,473,829...6,478,870
JBrowse link
skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 2:73,393,625...73,410,682
Ensembl chr 2:73,393,559...73,410,682
JBrowse link
G Chrnd cholinergic receptor, nicotinic, delta polypeptide involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 1:87,118,319...87,127,792
Ensembl chr 1:87,118,329...87,127,792
JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:28043812) MGI PMID:28043812 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 involved_in ISO RGD
GO_Central
PMID:21235761 GO_REF:0000096 RGD:5130936 NCBI chr 6:55,067,033...55,110,001
Ensembl chr 6:55,067,034...55,110,001
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (PMID:22940113) UniProt PMID:22940113 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G mt-Rnr1 12S rRNA, mitochondrial involved_in ISO (PMID:33554779) UniProt PMID:33554779 NCBI chr MT:70...1,024
Ensembl chr MT:70...1,024
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 acts_upstream_of IMP (PMID:23695157) MGI PMID:23695157 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297
JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:23872513) MGI PMID:23872513 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28632
    developmental process 7498
      anatomical structure development 6968
        tissue development 2398
          muscle tissue development 568
            striated muscle tissue development 541
              skeletal muscle tissue development 248
                branchiomeric skeletal muscle development + 3
                extraocular skeletal muscle development + 6
                negative regulation of skeletal muscle tissue development + 6
                positive regulation of skeletal muscle tissue development + 23
                regulation of skeletal muscle tissue development + 32
                skeletal muscle cell differentiation + 107
                skeletal muscle fiber development + 48
                skeletal muscle satellite stem cell asymmetric division + 0
                skeletal muscle tissue growth + 14
paths to the root