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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle tissue development
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Accession:GO:0007519 term browser browse the term
Definition:The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.
Synonyms:related_synonym: myogenesis
 alt_id: GO:0048637


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skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance involved_in ISO (PMID:26642364) UniProt PMID:26642364 NCBI chrNW_004955411:30,517,917...30,548,424
Ensembl chrNW_004955411:30,517,875...30,551,335
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:52955|PMID:14300095), (MGI:56113|PMID:6500174), (MGI:63119|PMID:14300096), (MGI:76166|PMID:7635187) MGI PMID:6500174 PMID:7635187 PMID:14300095 PMID:14300096 MGI:52955 MGI:56113 MGI:63119 MGI:76166 NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371
JBrowse link
G Casq1 calsequestrin 1 ISO RGD PMID:8600158 RGD:2313254 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within ISO (MGI:3695802|PMID:17200204) MGI PMID:17200204 MGI:3695802 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Ccnt2 cyclin T2 involved_in ISO (MGI:5706910|PMID:23060074) UniProt PMID:23060074 MGI:5706910 NCBI chrNW_004955440:2,424,976...2,468,388
Ensembl chrNW_004955440:2,424,978...2,470,811
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (MGI:892714|PMID:9191048) RGD
MGI
PMID:9191048 PMID:15208659 MGI:892714 RGD:1598429 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Cfl2 cofilin 2 involved_in ISO (MGI:5784971|PMID:24598388) UniProt PMID:24598388 MGI:5784971 NCBI chrNW_004955409:26,247,050...26,250,082
Ensembl chrNW_004955409:26,246,369...26,250,082
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chrNW_004955403:415,092...442,214
Ensembl chrNW_004955403:412,632...434,741
JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 ISO RGD PMID:8086475 RGD:11565082 NCBI chrNW_004955418:28,909,999...28,929,109
Ensembl chrNW_004955418:28,909,915...28,927,704
JBrowse link
G Col19a1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO (MGI:3053247|PMID:15302855) MGI PMID:15302855 MGI:3053247 NCBI chrNW_004955488:4,984,140...5,288,530
Ensembl chrNW_004955488:4,984,159...5,287,718
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO RGD PMID:1389227 RGD:727559 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751
JBrowse link
G Ctsb cathepsin B ISO RGD PMID:16497156 RGD:1599532 NCBI chrNW_004955403:53,086,236...53,100,217
Ensembl chrNW_004955403:53,085,574...53,093,809
JBrowse link
G Dcn decorin ISO RGD PMID:17679144 RGD:2303553 NCBI chrNW_004955405:28,335,493...28,371,912
Ensembl chrNW_004955405:28,332,545...28,372,323
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO (MGI:3623691|PMID:16371353)
(MGI:3586427|PMID:12895031)
MGI PMID:12895031 PMID:16371353 MGI:3586427 MGI:3623691 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) MGI PMID:22174839 MGI:5315068 NCBI chrNW_004955424:13,756,130...13,970,437
Ensembl chrNW_004955424:13,756,130...13,970,436
JBrowse link
G Eln elastin acts_upstream_of_or_within ISO (MGI:3027647|PMID:14614988) MGI PMID:14614988 MGI:3027647 NCBI chrNW_004955456:13,788,992...13,818,836 JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO (MGI:2677591|PMID:14517256) MGI PMID:14517256 MGI:2677591 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:8846777 RGD:2289973 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:8846777 RGD:2289973 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:2446071|PMID:11807098) MGI PMID:11807098 MGI:2446071 NCBI chrNW_004955430:7,680,394...7,832,124
Ensembl chrNW_004955430:7,680,394...7,832,124
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chrNW_004955421:16,595,445...17,075,923 JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chrNW_004955432:20,205,369...20,589,608
Ensembl chrNW_004955432:20,334,237...20,589,352
JBrowse link
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 acts_upstream_of_or_within ISO (MGI:4839873|PMID:20576599) MGI PMID:20576599 MGI:4839873 NCBI chrNW_004955415:16,062,068...16,118,029
Ensembl chrNW_004955415:16,060,931...16,118,059
JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) MGI PMID:22174839 MGI:5315068 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
G Hlx H2.0 like homeobox acts_upstream_of_or_within ISO (MGI:79044|PMID:8557196) MGI PMID:8557196 MGI:79044 NCBI chrNW_004955520:2,937,131...2,941,170
Ensembl chrNW_004955520:2,936,815...2,941,170
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within ISO (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chrNW_004955403:20,543,224...20,548,801
Ensembl chrNW_004955403:20,543,224...20,548,801
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within ISO (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chrNW_004955451:12,619,722...12,621,320 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:12909603 RGD:10059373 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Itga7 integrin subunit alpha 7 ISO RGD PMID:1315319 RGD:70774 NCBI chrNW_004955458:3,322,735...3,343,275
Ensembl chrNW_004955458:3,321,259...3,343,275
JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ISO RGD PMID:12652645 RGD:9743957 NCBI chrNW_004955448:7,145,471...7,553,090
Ensembl chrNW_004955448:7,309,717...7,551,432
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (MGI:3581988|PMID:15890335) MGI PMID:15890335 MGI:3581988 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 acts_upstream_of_or_within ISO (MGI:3655436|PMID:16717059) MGI PMID:16717059 MGI:3655436 NCBI chrNW_004955448:3,864,862...4,065,122
Ensembl chrNW_004955448:3,864,843...4,065,122
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within ISO (MGI:1340181|PMID:10403250) MGI PMID:10403250 MGI:1340181 NCBI chrNW_004955410:18,924,669...18,988,478
Ensembl chrNW_004955410:18,924,605...18,988,478
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:76093|PMID:7651534) MGI PMID:7651534 MGI:76093 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
JBrowse link
G Mettl21c methyltransferase 21C, AARS1 lysine acts_upstream_of_or_within ISO (MGI:5781029|PMID:24677265) MGI PMID:24677265 MGI:5781029 NCBI chrNW_004955404:8,447,359...8,460,853
Ensembl chrNW_004955404:8,447,359...8,460,847
JBrowse link
G Mettl8 methyltransferase 8, methylcytidine acts_upstream_of_or_within ISO (MGI:3582105|PMID:15992539) MGI PMID:15992539 MGI:3582105 NCBI chrNW_004955449:3,458,683...3,534,377
Ensembl chrNW_004955449:3,490,568...3,533,584
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO (MGI:3849775|PMID:19531352)
(MGI:64468|PMID:8269513)
MGI PMID:8269513 PMID:19531352 MGI:3849775 MGI:64468 NCBI chrNW_004955405:19,345,943...19,348,453
Ensembl chrNW_004955405:19,345,943...19,348,453
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO (MGI:3849775|PMID:19531352)
(MGI:72107|PMID:7720708)
(MGI:76810|PMID:7588068)
MGI PMID:7588068 PMID:7720708 PMID:19531352 MGI:3849775 MGI:72107 MGI:76810 NCBI chrNW_004955405:19,336,798...19,338,610
Ensembl chrNW_004955405:19,336,718...19,338,670
JBrowse link
G Myh14 myosin heavy chain 14 involved_in ISO (PMID:21480433) UniProt PMID:21480433 NCBI chrNW_004955559:796,455...856,082
Ensembl chrNW_004955559:797,107...853,053
JBrowse link
G Myl3 myosin light chain 3 ISO RGD PMID:2717409 RGD:633442 NCBI chrNW_004955420:25,308,513...25,311,959
Ensembl chrNW_004955420:25,305,759...25,312,271
JBrowse link
G Mylpf myosin light chain, phosphorylatable, fast skeletal muscle involved_in ISO (MGI:3773777|PMID:17356007) RGD
BHF-UCL
PMID:6179945 PMID:17356007 MGI:3773777 RGD:633441 NCBI chrNW_004955493:7,301,609...7,304,118
Ensembl chrNW_004955493:7,298,109...7,307,573
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:64468|PMID:8269513)
(MGI:3586427|PMID:12895031)
(MGI:3849775|PMID:19531352)
(MGI:2180395|PMID:12037571), (MGI:3027696|PMID:14762206)
MGI PMID:8269513 PMID:12037571 PMID:12895031 PMID:14762206 PMID:19531352 MGI:2180395 MGI:3027696 MGI:3586427 MGI:3849775 MGI:64468 NCBI chrNW_004955414:32,523,959...32,526,575
Ensembl chrNW_004955414:32,523,924...32,526,674
JBrowse link
G Myog myogenin acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) MGI PMID:14762206 MGI:3027696 NCBI chrNW_004955406:39,099,044...39,102,479
Ensembl chrNW_004955406:39,099,716...39,102,501
JBrowse link
G Myoz1 myozenin 1 involved_in ISO (MGI:3831256|PMID:18846255) BHF-UCL PMID:18846255 MGI:3831256 NCBI chrNW_004955437:18,191,514...18,199,122
Ensembl chrNW_004955437:18,191,242...18,199,188
JBrowse link
G Myoz2 myozenin 2 involved_in ISO (MGI:3513659|PMID:15543153) BHF-UCL PMID:15543153 MGI:3513659 NCBI chrNW_004955428:21,052,352...21,088,468
Ensembl chrNW_004955428:21,052,137...21,101,795
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO RGD PMID:9839950 RGD:5688344 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 ISO RGD PMID:12213446 RGD:2302390 NCBI chrNW_004955485:7,015,969...7,046,089 JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in ISO (MGI:3849657|PMID:19470472) UniProt PMID:19470472 MGI:3849657 NCBI chrNW_004955468:2,715,728...2,734,174
Ensembl chrNW_004955468:2,714,419...2,734,830
JBrowse link
G Nr2f2 nuclear receptor subfamily 2 group F member 2 acts_upstream_of_or_within ISO (MGI:3609470|PMID:16251273)
(MGI:3525754|PMID:15572686)
MGI PMID:15572686 PMID:16251273 MGI:3525754 MGI:3609470 NCBI chrNW_004955416:24,148,052...24,154,406
Ensembl chrNW_004955416:24,141,888...24,168,585
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (MGI:1889987|PMID:11030621) MGI PMID:11030621 MGI:1889987 NCBI chrNW_004955527:474,450...573,869
Ensembl chrNW_004955527:474,403...574,689
JBrowse link
G Pdlim3 PDZ and LIM domain 3 NOT|acts_upstream_of_or_within ISO (MGI:1930426|PMID:11238905) MGI PMID:11238905 MGI:1930426 NCBI chrNW_004955403:23,546,291...23,579,975
Ensembl chrNW_004955403:23,546,291...23,579,975
JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:1347482|PMID:10572050) MGI PMID:10572050 MGI:1347482 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
G Plec plectin involved_in ISO (MGI:1350765|PMID:9389647) MGI PMID:9389647 MGI:1350765 NCBI chrNW_004955454:2,583,138...2,644,308
Ensembl chrNW_004955454:2,583,138...2,643,211
JBrowse link
G Rcan1 regulator of calcineurin 1 ISO RGD PMID:15219871 RGD:1304341 NCBI chrNW_004955407:33,873,427...33,951,762
Ensembl chrNW_004955407:33,873,383...33,951,498
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:2175934|PMID:11877460) MGI PMID:11877460 MGI:2175934 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451
JBrowse link
G Rxrg retinoid X receptor gamma ISO RGD PMID:9389449 RGD:633976 NCBI chrNW_004955462:11,238,963...11,281,905
Ensembl chrNW_004955462:11,238,794...11,281,956
JBrowse link
G Sgce sarcoglycan epsilon ISO RGD PMID:14625080 RGD:1303966 NCBI chrNW_004955432:11,310,488...11,383,803
Ensembl chrNW_004955432:11,310,129...11,383,803
JBrowse link
G Sin3b SIN3 transcription regulator family member B involved_in ISO (MGI:3687784|PMID:10620510) UniProt PMID:10620510 MGI:3687784 NCBI chrNW_004955524:1,049,828...1,067,637
Ensembl chrNW_004955524:1,050,425...1,071,662
JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3715562|PMID:17592144)
(MGI:3578604|PMID:15788460)
UniProt
MGI
PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069
JBrowse link
G Six4 SIX homeobox 4 involved_in
acts_upstream_of_or_within
ISO (MGI:3715562|PMID:17592144)
(MGI:3578604|PMID:15788460)
UniProt
MGI
PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chrNW_004955466:8,902,728...8,915,685
Ensembl chrNW_004955466:8,902,517...8,915,723
JBrowse link
G Skil SKI like proto-oncogene involved_in ISO (PMID:17202138) UniProt PMID:17202138 NCBI chrNW_004955420:530,531...554,308
Ensembl chrNW_004955420:530,528...554,551
JBrowse link
G Srpk3 SRSF protein kinase 3 acts_upstream_of_or_within ISO (MGI:3588628|PMID:16140986) MGI PMID:16140986 MGI:3588628 NCBI chrNW_004955580:496,447...500,709
Ensembl chrNW_004955580:496,451...500,709
JBrowse link
G Svil supervillin involved_in ISO (PMID:12711699) UniProt PMID:12711699 NCBI chrNW_004955429:22,339,739...22,465,471
Ensembl chrNW_004955429:22,370,458...22,464,579
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) HGNC-UCL PMID:17043667 NCBI chrNW_004955580:915,668...921,703
Ensembl chrNW_004955580:915,188...922,791
JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO RGD PMID:16439574 RGD:2302095 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Vamp5 vesicle associated membrane protein 5 acts_upstream_of_or_within ISO (MGI:1858282|PMID:9725904) MGI PMID:9725904 MGI:1858282 NCBI chrNW_004955424:1,911,711...1,912,865
Ensembl chrNW_004955424:1,911,711...1,912,874
JBrowse link
G Vgll2 vestigial like family member 2 acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) MGI PMID:14762206 MGI:3027696 NCBI chrNW_004955436:510,478...514,511 JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 involved_in ISO (MGI:4418579|PMID:20059953) UniProt PMID:20059953 MGI:4418579 NCBI chrNW_004955406:7,364,080...7,372,038
Ensembl chrNW_004955406:7,364,080...7,373,483
JBrowse link
branchiomeric skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msc musculin involved_in ISO (MGI:3653784|PMID:12493912) UniProt PMID:12493912 MGI:3653784 NCBI chrNW_004955444:8,064,867...8,067,381
Ensembl chrNW_004955444:8,064,867...8,067,408
JBrowse link
G Pitx1 paired like homeodomain 1 acts_upstream_of_or_within ISO (MGI:3706272|PMID:17384148) MGI PMID:17384148 MGI:3706272 NCBI chrNW_004955408:30,197,374...30,202,887
Ensembl chrNW_004955408:30,197,061...30,203,054
JBrowse link
G Tcf21 transcription factor 21 involved_in ISO (MGI:3653784|PMID:12493912) UniProt PMID:12493912 MGI:3653784 NCBI chrNW_004955439:2,617,562...2,620,613
Ensembl chrNW_004955439:2,617,492...2,620,644
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:3613415|PMID:14618389) MGI PMID:14618389 MGI:3613415 NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:12630957) UniProt PMID:12630957 NCBI chrNW_004955501:83,965...84,476 JBrowse link
G Myh15 myosin heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chrNW_004955427:9,257,716...9,400,526
Ensembl chrNW_004955427:9,259,811...9,400,526
JBrowse link
G Myom1 myomesin 1 ISO RGD PMID:12878677 RGD:633368 NCBI chrNW_004955402:7,293,415...7,418,226
Ensembl chrNW_004955402:7,297,502...7,417,583
JBrowse link
G Myom2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chrNW_004955403:57,718,120...57,783,338
Ensembl chrNW_004955403:57,717,151...57,772,254
JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3624183|PMID:16638982)
(MGI:4881620|PMID:21035439)
MGI PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
negative regulation of satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin1 akirin 1 involved_in ISO (MGI:6201977|PMID:18255059) UniProt PMID:18255059 MGI:6201977 NCBI chrNW_004955452:16,607,980...16,624,376
Ensembl chrNW_004955452:16,607,980...16,624,376
JBrowse link
G Ephb1 EPH receptor B1 involved_in ISO (MGI:5897527|PMID:27446912) UniProt PMID:27446912 MGI:5897527 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:4836102|PMID:20696153) UniProt PMID:20696153 MGI:4836102 NCBI chrNW_004955466:8,902,728...8,915,685
Ensembl chrNW_004955466:8,902,517...8,915,723
JBrowse link
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 acts_upstream_of_or_within ISO (MGI:5476405|PMID:23300487) MGI PMID:23300487 MGI:5476405 NCBI chrNW_004955416:9,070,479...9,121,099
Ensembl chrNW_004955416:9,070,399...9,117,794
JBrowse link
G Myocd myocardin involved_in ISO (PMID:18451334) BHF-UCL PMID:18451334 NCBI chrNW_004955467:4,653,065...4,743,438
Ensembl chrNW_004955467:4,656,380...4,743,110
JBrowse link
G S100b S100 calcium binding protein B ISO RGD PMID:20069545 RGD:5508829 NCBI chrNW_004955407:42,972,584...42,980,510
Ensembl chrNW_004955407:42,972,584...42,980,510
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chrNW_004955435:18,001,517...18,009,105
Ensembl chrNW_004955435:18,001,517...18,009,103
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tsc22d3 TSC22 domain family member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chrNW_004955490:8,177,356...8,238,373
Ensembl chrNW_004955490:8,177,356...8,238,373
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5315325|PMID:21971047) UniProt PMID:21971047 MGI:5315325 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
G Ybx3 Y-box binding protein 3 acts_upstream_of_or_within ISO (MGI:3808638|PMID:18676817) MGI PMID:18676817 MGI:3808638 NCBI chrNW_004955413:7,090,085...7,111,542
Ensembl chrNW_004955413:7,089,719...7,108,473
JBrowse link
negative regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mstn myostatin acts_upstream_of_or_within
involved_in
ISO (MGI:3776975|PMID:18286185)
(MGI:2176357|PMID:11877467), (MGI:4948370|PMID:21390326), (MGI:5544527|PMID:24076600), (MGI:87393|PMID:9139826)
(PMID:15215484)
RGD
MGI
CACAO
PMID:9139826 PMID:11877467 PMID:15215484 PMID:16575154 PMID:18286185 PMID:21390326 PMID:24076600 MGI:2176357 MGI:3776975 MGI:4948370 MGI:5544527 MGI:87393 RGD:1601299 NCBI chrNW_004955403:8,914,505...8,921,190
Ensembl chrNW_004955403:8,914,482...8,923,465
JBrowse link
G Tll2 tolloid like 2 acts_upstream_of_or_within ISO (MGI:3776975|PMID:18286185) MGI PMID:18286185 MGI:3776975 NCBI chrNW_004955507:2,591,619...2,718,161
Ensembl chrNW_004955507:2,591,608...2,718,440
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:5605930|PMID:25014022) MGI PMID:25014022 MGI:5605930 NCBI chrNW_004955467:2,422,181...2,456,925
Ensembl chrNW_004955467:2,423,659...2,457,307
JBrowse link
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator like involved_in ISO (MGI:5553223|PMID:23525013) UniProt PMID:23525013 MGI:5553223 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Gpc1 glypican 1 acts_upstream_of_or_within ISO (PMID:20100867) UniProt PMID:20100867 NCBI chrNW_004955542:947,556...968,295
Ensembl chrNW_004955542:947,556...968,295
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:21556048) UniProt PMID:21556048 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chrNW_004955422:18,799,372...18,812,458
Ensembl chrNW_004955422:18,799,372...18,812,711
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chrNW_004955421:18,728,993...18,744,326
Ensembl chrNW_004955421:18,728,692...18,743,974
JBrowse link
G Myog myogenin involved_in ISO (MGI:62381|PMID:8393145) UniProt PMID:8393145 MGI:62381 NCBI chrNW_004955406:39,099,044...39,102,479
Ensembl chrNW_004955406:39,099,716...39,102,501
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chrNW_004955448:8,937,656...8,947,890
Ensembl chrNW_004955448:8,937,610...8,947,890
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) UniProt PMID:25313962 MGI:6148527 NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chrNW_004955412:27,004,391...27,093,968
Ensembl chrNW_004955412:27,003,919...27,065,989
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (MGI:5619733|PMID:23460868) CACAO PMID:23460868 MGI:5619733 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
UniProt PMID:24046456 MGI:5634880 NCBI chrNW_004955583:717,246...729,924
Ensembl chrNW_004955583:713,560...729,924
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1929969|PMID:11171399) MGI PMID:11171399 MGI:1929969 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) CACAO PMID:11856745 MGI:2179189 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chrNW_004955422:18,799,372...18,812,458
Ensembl chrNW_004955422:18,799,372...18,812,711
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5608606|PMID:25220152) UniProt PMID:25220152 MGI:5608606 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Igf2 insulin like growth factor 2 involved_in ISO (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chrNW_004955422:13,880,525...13,907,963
Ensembl chrNW_004955422:13,880,471...13,888,566
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chrNW_004955458:4,251,679...4,265,430
Ensembl chrNW_004955458:4,248,599...4,265,584
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102023166 cytochrome P450 26B1 involved_in ISO (MGI:3809313|PMID:18816858) UniProt PMID:18816858 MGI:3809313 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO (MGI:3809313|PMID:18816858) UniProt PMID:18816858 MGI:3809313 NCBI chrNW_004955442:18,320,674...18,327,062
Ensembl chrNW_004955442:18,319,762...18,325,337
JBrowse link
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:17011493) UniProt PMID:17011493 NCBI chrNW_004955413:24,646,317...24,664,614
Ensembl chrNW_004955413:24,646,320...24,664,614
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (MGI:5315343|PMID:17011493) UniProt PMID:17011493 MGI:5315343 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
JBrowse link
G Klhl41 kelch like family member 41 acts_upstream_of_or_within ISO (MGI:5424274|PMID:22562206) MGI PMID:22562206 MGI:5424274 NCBI chrNW_004955449:5,023,362...5,041,006
Ensembl chrNW_004955449:5,023,362...5,061,705
JBrowse link
G LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 involved_in ISO (MGI:5520038|PMID:22363741) UniProt PMID:22363741 MGI:5520038 NCBI chrNW_004955437:2,107,475...2,119,892
Ensembl chrNW_004955437:2,107,475...2,119,892
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:5526938|PMID:15623503) UniProt PMID:15623503 MGI:5526938 NCBI chrNW_004955430:15,812,449...15,834,341
Ensembl chrNW_004955430:15,812,448...15,834,412
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 acts_upstream_of_or_within ISO (MGI:5485311|PMID:23349951) MGI PMID:23349951 MGI:5485311 NCBI chrNW_004955442:10,345,261...10,694,602
Ensembl chrNW_004955442:10,344,365...10,908,434
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:4836102|PMID:20696153) UniProt PMID:20696153 MGI:4836102 NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250
JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004955542:1,629,691...1,886,160
Ensembl chrNW_004955542:1,629,691...1,886,210
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004955410:21,046,312...21,932,029
Ensembl chrNW_004955410:21,245,562...21,932,023
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chrNW_004955458:4,251,679...4,265,430
Ensembl chrNW_004955458:4,248,599...4,265,584
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nln neurolysin acts_upstream_of_or_within ISO (MGI:5588076|PMID:24719333) MGI PMID:24719333 MGI:5588076 NCBI chrNW_004955446:3,258,278...3,374,337
Ensembl chrNW_004955446:3,256,078...3,374,462
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694
JBrowse link
G Megf10 multiple EGF like domains 10 involved_in ISO (PMID:22101682) UniProt PMID:22101682 NCBI chrNW_004955415:393,642...513,157
Ensembl chrNW_004955415:335,012...513,891
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
JBrowse link
regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:3701154|PMID:17194759) UniProt PMID:17194759 MGI:3701154 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955425:2,258,554...2,267,699
Ensembl chrNW_004955425:2,258,392...2,267,878
JBrowse link
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955507:3,678,009...3,686,967
Ensembl chrNW_004955507:3,677,858...3,687,979
JBrowse link
G Ankrd33 ankyrin repeat domain 33 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955547:2,263,769...2,269,180 JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955438:16,005,570...16,041,668
Ensembl chrNW_004955438:16,005,570...16,042,115
JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955406:4,875,672...4,889,173
Ensembl chrNW_004955406:4,875,613...4,889,242
JBrowse link
G Bcl9 BCL9 transcription coactivator acts_upstream_of_or_within ISO (MGI:4368064|PMID:19699733) MGI PMID:19699733 MGI:4368064 NCBI chrNW_004955568:785,361...866,986
Ensembl chrNW_004955568:783,692...811,600
JBrowse link
G Bcl9l BCL9 like acts_upstream_of_or_within ISO (MGI:4368064|PMID:19699733) MGI PMID:19699733 MGI:4368064 NCBI chrNW_004955412:20,029,988...20,059,057
Ensembl chrNW_004955412:20,029,988...20,059,057
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955409:4,859,971...4,888,487
Ensembl chrNW_004955409:4,859,972...4,891,575
JBrowse link
G Dmrta2 DMRT like family A2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955464:8,493,392...8,498,007
Ensembl chrNW_004955464:8,495,055...8,497,909
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO RGD PMID:16682826 RGD:10401256 NCBI chrNW_004955495:4,800,103...4,807,714
Ensembl chrNW_004955495:4,799,922...4,807,252
JBrowse link
G Egr1 early growth response 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Egr2 early growth response 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5300631|PMID:22147266)
(MGI:3695113|PMID:11509834)
MGI
UniProt
PMID:11509834 PMID:22147266 MGI:3695113 MGI:5300631 NCBI chrNW_004955425:16,055,748...16,068,429
Ensembl chrNW_004955425:16,055,748...16,060,048
JBrowse link
G Emd emerin acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741) MGI PMID:19720741 MGI:4366679 NCBI chrNW_004955580:864,532...866,904
Ensembl chrNW_004955580:864,532...866,904
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955523:307,181...310,728
Ensembl chrNW_004955523:305,728...310,728
JBrowse link
G Foxn2 forkhead box N2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955441:14,882,312...14,950,878
Ensembl chrNW_004955441:14,882,291...14,950,878
JBrowse link
G Gtf3c5 general transcription factor IIIC subunit 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955513:2,304,133...2,320,977
Ensembl chrNW_004955513:2,304,133...2,321,597
JBrowse link
G Heyl hes related family bHLH transcription factor with YRPW motif like acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955452:17,137,066...17,152,714
Ensembl chrNW_004955452:17,134,770...17,152,924
JBrowse link
G Hivep3 HIVEP zinc finger 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955537:1,255,284...1,589,514
Ensembl chrNW_004955537:1,255,257...1,339,626
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955451:7,309,895...7,364,166
Ensembl chrNW_004955451:7,309,895...7,364,172
JBrowse link
G Hmg20b high mobility group 20B acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955495:5,515,996...5,530,424
Ensembl chrNW_004955495:5,524,874...5,529,926
JBrowse link
G Klf5 Kruppel like factor 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955404:33,642,604...33,665,445
Ensembl chrNW_004955404:33,644,077...33,658,094
JBrowse link
G Klhl41 kelch like family member 41 involved_in ISO (MGI:5424274|PMID:22562206) UniProt PMID:22562206 MGI:5424274 NCBI chrNW_004955449:5,023,362...5,041,006
Ensembl chrNW_004955449:5,023,362...5,061,705
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741)
(PMID:19720741)
MGI PMID:19720741 MGI:4366679 NCBI chrNW_004955437:2,163,977...2,178,783
Ensembl chrNW_004955437:2,163,878...2,176,665
JBrowse link
G Maff MAF bZIP transcription factor F acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955413:24,494,326...24,504,728 JBrowse link
G Med20 mediator complex subunit 20 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955437:8,246,335...8,256,987
Ensembl chrNW_004955437:8,246,335...8,256,986
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Mef2d myocyte enhancer factor 2D acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955545:2,569,399...2,602,580
Ensembl chrNW_004955545:2,569,399...2,602,579
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955405:19,345,943...19,348,453
Ensembl chrNW_004955405:19,345,943...19,348,453
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955405:19,336,798...19,338,610
Ensembl chrNW_004955405:19,336,718...19,338,670
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in ISO (PMID:21556048) UniProt PMID:21556048 NCBI chrNW_004955422:29,141,699...29,154,927
Ensembl chrNW_004955422:29,141,348...29,154,927
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within
involved_in
ISO (MGI:5300631|PMID:22147266)
(MGI:5706660|PMID:26658965)
MGI PMID:22147266 PMID:26658965 MGI:5300631 MGI:5706660 NCBI chrNW_004955414:32,523,959...32,526,575
Ensembl chrNW_004955414:32,523,924...32,526,674
JBrowse link
G Ngfr nerve growth factor receptor ISO RGD PMID:16723531 RGD:1580249 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955547:2,404,532...2,426,882
Ensembl chrNW_004955547:2,404,532...2,431,050
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO (MGI:4360820|PMID:19723804) MGI PMID:19723804 MGI:4360820 NCBI chrNW_004955493:6,746,380...6,747,763
Ensembl chrNW_004955493:6,746,380...6,747,763
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955419:29,395,631...29,577,272
Ensembl chrNW_004955419:29,395,389...29,570,952
JBrowse link
G Phox2b paired like homeobox 2B acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955443:5,935,975...5,938,747
Ensembl chrNW_004955443:5,935,975...5,938,747
JBrowse link
G Plagl1 PLAG1 like zinc finger 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955436:16,452,797...16,511,872
Ensembl chrNW_004955436:16,423,216...16,510,799
JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
JBrowse link
G Sap30 Sin3A associated protein 30 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955403:33,633,028...33,639,271
Ensembl chrNW_004955403:33,633,236...33,638,983
JBrowse link
G Scx scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955454:2,886,981...2,888,829
Ensembl chrNW_004955454:2,886,981...2,888,829
JBrowse link
G Smyd1 SET and MYND domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955424:769,287...800,646
Ensembl chrNW_004955424:769,287...800,885
JBrowse link
G Snw1 SNW domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Sox11 SRY-box transcription factor 11 acts_upstream_of_or_within ISO (MGI:5297659|PMID:20847309) MGI PMID:20847309 MGI:5297659 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955431:21,853,636...21,857,547
Ensembl chrNW_004955431:21,853,636...21,857,547
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:4368064|PMID:19699733) MGI PMID:19699733 MGI:4368064 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Znf689 zinc finger protein 689 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chrNW_004955759:5,615...11,900
Ensembl chrNW_004955759:2,457...11,900
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in ISO (MGI:78319|PMID:2731651) UniProt PMID:2731651 MGI:78319 NCBI chrNW_004955492:8,644,696...8,647,412
Ensembl chrNW_004955492:8,644,146...8,647,523
JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO (MGI:5517720|PMID:23872330) MGI PMID:23872330 MGI:5517720 NCBI chrNW_004955403:46,042,885...46,085,029
Ensembl chrNW_004955403:46,042,885...46,085,029
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:66718|PMID:8143864)
(MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749)
MGI PMID:289331 PMID:8143864 PMID:8462749 MGI:3630139 MGI:53207 MGI:66718 NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371
JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within ISO (MGI:3695802|PMID:17200204) MGI PMID:17200204 MGI:3695802 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Dner delta/notch like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) MGI PMID:15965470 MGI:3583881 NCBI chrNW_004955453:5,307,256...5,615,550
Ensembl chrNW_004955453:5,307,256...5,615,609
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3662804|PMID:16962942) MGI PMID:16962942 MGI:3662804 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Homer1 homer scaffold protein 1 acts_upstream_of_or_within ISO (MGI:3784629|PMID:18268005) MGI PMID:18268005 MGI:3784629 NCBI chrNW_004955425:21,644,577...21,774,843
Ensembl chrNW_004955425:21,644,571...21,775,735
JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chrNW_004955494:668,188...688,036
Ensembl chrNW_004955494:668,798...688,079
JBrowse link
G Klhl40 kelch like family member 40 involved_in
acts_upstream_of_or_within
ISO (MGI:5700633|PMID:25940086)
(MGI:5586592|PMID:24960163)
UniProt
MGI
PMID:24960163 PMID:25940086 MGI:5586592 MGI:5700633 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) UniProt PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chrNW_004955421:18,728,993...18,744,326
Ensembl chrNW_004955421:18,728,692...18,743,974
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004955414:32,523,959...32,526,575
Ensembl chrNW_004955414:32,523,924...32,526,674
JBrowse link
G Myog myogenin acts_upstream_of_or_within ISO (MGI:62381|PMID:8393145) MGI PMID:8393145 MGI:62381 NCBI chrNW_004955406:39,099,044...39,102,479
Ensembl chrNW_004955406:39,099,716...39,102,501
JBrowse link
G Myorg myogenesis regulating glycosidase (putative) involved_in
acts_upstream_of_or_within
ISO (PMID:19706595)
(MGI:4422154|PMID:19706595)
UniProt
MGI
PMID:19706595 MGI:4422154 NCBI chrNW_004955472:1,735,292...1,740,304
Ensembl chrNW_004955472:1,735,292...1,740,304
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:1933051|PMID:11254352) MGI PMID:11254352 MGI:1933051 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680
JBrowse link
G P2rx2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (MGI:3766888|PMID:17706883) MGI PMID:17706883 MGI:3766888 NCBI chrNW_004955482:418,101...422,058
Ensembl chrNW_004955482:419,213...421,583
JBrowse link
G Plec plectin involved_in ISO (MGI:3797705|PMID:18490514)
(MGI:5567855|PMID:24487589)
MGI PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chrNW_004955454:2,583,138...2,644,308
Ensembl chrNW_004955454:2,583,138...2,643,211
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) MGI PMID:16024798 MGI:3586394 NCBI chrNW_004955496:6,934,542...7,059,745
Ensembl chrNW_004955496:6,908,224...7,059,816
JBrowse link
G Rcan1 regulator of calcineurin 1 acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) MGI PMID:16024798 MGI:3586394 NCBI chrNW_004955407:33,873,427...33,951,762
Ensembl chrNW_004955407:33,873,383...33,951,498
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISO (MGI:3764002|PMID:18003898) UniProt PMID:18003898 MGI:3764002 NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (MGI:5494499|PMID:23325319) MGI PMID:23325319 MGI:5494499 NCBI chrNW_004955452:5,295,716...5,311,113
Ensembl chrNW_004955452:5,296,035...5,309,102
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:1095997 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:5438143|PMID:22987639) MGI PMID:22987639 MGI:5438143 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) MGI PMID:23626854 MGI:5508972 NCBI chrNW_004955458:4,971,450...4,980,262
Ensembl chrNW_004955458:4,971,450...4,980,262
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
JBrowse link
G Xk X-linked Kx blood group acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chrNW_004955587:668,871...725,829
Ensembl chrNW_004955587:668,070...728,959
JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl40 kelch like family member 40 involved_in
acts_upstream_of_or_within
ISO (MGI:5700633|PMID:25940086)
(MGI:5565628|PMID:24361185)
UniProt
MGI
PMID:24361185 PMID:25940086 MGI:5565628 MGI:5700633 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) UniProt PMID:21884692 MGI:5298278 NCBI chrNW_004955466:8,902,728...8,915,685
Ensembl chrNW_004955466:8,902,517...8,915,723
JBrowse link
skeletal muscle satellite cell commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax7 paired box 7 acts_upstream_of_or_within ISO (MGI:1889987|PMID:11030621) MGI PMID:11030621 MGI:1889987 NCBI chrNW_004955527:474,450...573,869
Ensembl chrNW_004955527:474,403...574,689
JBrowse link
skeletal muscle satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chrNW_004955412:27,004,391...27,093,968
Ensembl chrNW_004955412:27,003,919...27,065,989
JBrowse link
G Klf5 Kruppel like factor 5 acts_upstream_of_or_within ISO (MGI:5823533|PMID:27743478) MGI PMID:27743478 MGI:5823533 NCBI chrNW_004955404:33,642,604...33,665,445
Ensembl chrNW_004955404:33,644,077...33,658,094
JBrowse link
G Megf10 multiple EGF like domains 10 involved_in ISO (PMID:22101682)
(MGI:5319607|PMID:18056409)
UniProt PMID:18056409 PMID:22101682 MGI:5319607 NCBI chrNW_004955415:393,642...513,157
Ensembl chrNW_004955415:335,012...513,891
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in ISO (MGI:5013486|PMID:21556048) UniProt PMID:21556048 MGI:5013486 NCBI chrNW_004955422:29,141,699...29,154,927
Ensembl chrNW_004955422:29,141,348...29,154,927
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (MGI:4936779|PMID:21131290) MGI PMID:21131290 MGI:4936779 NCBI chrNW_004955452:5,295,716...5,311,113
Ensembl chrNW_004955452:5,296,035...5,309,102
JBrowse link
skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit involved_in ISO (PMID:18252226) BHF-UCL PMID:18252226 NCBI chrNW_004955449:661,310...683,873
Ensembl chrNW_004955449:661,304...683,873
JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit involved_in ISO (PMID:18252226) BHF-UCL PMID:18252226 NCBI chrNW_004955453:3,433,915...3,440,534
Ensembl chrNW_004955453:3,433,341...3,440,269
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:21235761 RGD:5130936 NCBI chrNW_004955410:31,830,333...31,874,384
Ensembl chrNW_004955410:31,828,506...31,875,100
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5442624|PMID:22940113) UniProt PMID:22940113 MGI:5442624 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11940
    developmental process 5659
      anatomical structure development 5288
        tissue development 1838
          muscle tissue development 444
            striated muscle tissue development 423
              skeletal muscle tissue development 196
                branchiomeric skeletal muscle development + 3
                extraocular skeletal muscle development + 6
                negative regulation of skeletal muscle tissue development + 7
                positive regulation of skeletal muscle tissue development + 20
                regulation of skeletal muscle tissue development + 30
                skeletal muscle cell differentiation + 75
                skeletal muscle fiber development + 34
                skeletal muscle satellite stem cell asymmetric division + 0
                skeletal muscle tissue growth + 12
Path 2
Term Annotations click to browse term
  biological_process 11940
    developmental process 5659
      anatomical structure development 5288
        multicellular organism development 4845
          system development 4567
            animal organ development 3522
              muscle organ development 311
                skeletal muscle organ development 208
                  skeletal muscle tissue development 196
                    branchiomeric skeletal muscle development + 3
                    extraocular skeletal muscle development + 6
                    negative regulation of skeletal muscle tissue development + 7
                    positive regulation of skeletal muscle tissue development + 20
                    regulation of skeletal muscle tissue development + 30
                    skeletal muscle cell differentiation + 75
                    skeletal muscle fiber development + 34
                    skeletal muscle satellite stem cell asymmetric division + 0
                    skeletal muscle tissue growth + 12
paths to the root