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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle tissue development
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Accession:GO:0007519 term browser browse the term
Definition:The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.
Synonyms:related_synonym: myogenesis
 alt_id: GO:0048637



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skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:26642364)
UniProt
RGD
PMID:26642364 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:48,819,241...48,860,282
Ensembl chr20:48,822,308...48,857,472
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO MGI:1856326 (MGI:52955|PMID:14300095), (MGI:56113|PMID:6500174), (MGI:63119|PMID:14300096), (MGI:76166|PMID:7635187) RGD PMID:6500174 PMID:7635187 PMID:14300095 PMID:14300096 MGI:52955 MGI:56113 MGI:63119 MGI:76166 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Casq1 calsequestrin 1 IEP RGD PMID:8600158 RGD:2313254 NCBI chr13:84,670,648...84,680,339
Ensembl chr13:84,670,649...84,680,339
JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within ISO MGI:2180364 (MGI:3695802|PMID:17200204) RGD PMID:17200204 MGI:3695802 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ccnt2 cyclin T2 involved_in ISO (MGI:5706910|PMID:23060074) RGD PMID:23060074 MGI:5706910 NCBI chr13:39,251,573...39,293,172
Ensembl chr13:39,251,573...39,292,019
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within
involved_in
IEP
ISO
TAS
(MGI:892714|PMID:9191048)
PMID:11276227
RGD PMID:9191048 PMID:15208659 PMID:11276227 MGI:892714, RGD:1598429, RGD:8554712 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of ISO MGI:2653120 (MGI:3522534|PMID:15572127) RGD PMID:15572127 MGI:3522534 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Cfl2 cofilin 2 involved_in ISO (MGI:5784971|PMID:24598388) RGD PMID:24598388 MGI:5784971 NCBI chr 6:72,355,664...72,359,709
Ensembl chr 6:72,355,664...72,359,674
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 IEP RGD PMID:8086475 RGD:11565082 NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758
JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 IEP RGD PMID:8086475 RGD:11565082 NCBI chr 2:23,079,920...23,110,518
Ensembl chr 2:23,079,918...23,110,430
JBrowse link
G Col19a1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO MGI:3053870 (MGI:3053247|PMID:15302855) RGD PMID:15302855 MGI:3053247 NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEP RGD PMID:1389227 RGD:727559 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Ctsb cathepsin B IEP RGD PMID:16497156 RGD:1599532 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
JBrowse link
G Dcn decorin IEP RGD PMID:17679144 RGD:2303553 NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1856328|MGI:97275 (MGI:3586427|PMID:12895031), (MGI:3623691|PMID:16371353)
PMID:21873635
RGD PMID:12895031 PMID:16371353 PMID:21873635 MGI:3586427 MGI:3623691, RGD:13792537 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) RGD PMID:22174839 MGI:5315068 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Eln elastin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2153007 (MGI:3027647|PMID:14614988)
Ensembl
RGD
PMID:14614988 GO_REF:0000107 MGI:3027647 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:2679374 (MGI:2677591|PMID:14517256) RGD PMID:14517256 MGI:2677591 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:8846777 RGD:2289973 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:8846777 RGD:2289973 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:2446071|PMID:11807098) RGD PMID:11807098 MGI:2446071 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:2148705 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:1914004 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
JBrowse link
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 acts_upstream_of_or_within ISO (MGI:4839873|PMID:20576599) RGD PMID:20576599 MGI:4839873 NCBI chr 3:119,787,681...119,832,550
Ensembl chr 3:119,787,682...119,832,517
JBrowse link
G H19 H19, imprinted maternally expressed transcript (non-protein coding) IEP RGD PMID:7838525 RGD:2306191 NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) RGD PMID:22174839 MGI:5315068 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:2182089 (MGI:79044|PMID:8557196) RGD PMID:8557196 MGI:79044 NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96210 (MGI:1350864|PMID:10642795) RGD PMID:10642795 MGI:1350864 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725
JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96202 (MGI:1350864|PMID:10642795)
Ensembl
RGD
PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:12909603 RGD:10059373 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Itga7 integrin subunit alpha 7 IEP RGD PMID:1315319 RGD:70774 NCBI chr 7:1,360,125...1,388,886
Ensembl chr 7:1,359,940...1,388,450
JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 IEP RGD PMID:12652645 RGD:9743957 NCBI chr 2:149,137,025...149,603,540
Ensembl chr 2:149,137,041...149,603,534
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3581988|PMID:15890335)
Ensembl
RGD
PMID:15890335 GO_REF:0000107 MGI:3581988 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (MGI:3655436|PMID:16717059) RGD PMID:16717059 MGI:3655436 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:3718323 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2674242 (MGI:1340181|PMID:10403250)
Ensembl
RGD
PMID:10403250 GO_REF:0000107 MGI:1340181 NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857655 (MGI:76093|PMID:7651534) RGD PMID:7651534 MGI:76093 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mettl21c methyltransferase like 21C acts_upstream_of_or_within ISO (MGI:5781029|PMID:24677265) RGD PMID:24677265 MGI:5781029 NCBI chr 9:46,130,451...46,145,128
Ensembl chr 9:46,134,001...46,145,112
JBrowse link
G Mettl8 methyltransferase like 8 acts_upstream_of_or_within ISO (MGI:3582105|PMID:15992539) RGD PMID:15992539 MGI:3582105 NCBI chr 3:55,731,453...55,863,652
Ensembl chr 3:55,770,167...55,863,676
JBrowse link
G Msc musculin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:4,547,335...4,553,206
Ensembl chr 5:4,547,405...4,553,203
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973|MGI:3055340|MGI:97253|MGI:97275 (MGI:3849775|PMID:19531352), (MGI:64468|PMID:8269513) RGD PMID:8269513 PMID:19531352 MGI:3849775 MGI:64468 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO MGI:1857220|MGI:1927607|MGI:97252 (MGI:3849775|PMID:19531352), (MGI:72107|PMID:7720708), (MGI:76810|PMID:7588068) RGD PMID:7588068 PMID:7720708 PMID:19531352 MGI:3849775 MGI:72107 MGI:76810 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
JBrowse link
G Myh14 myosin heavy chain 14 involved_in ISO (PMID:21480433) RGD PMID:21480433 NCBI chr 1:95,096,266...95,158,861
Ensembl chr 1:95,096,266...95,158,836
JBrowse link
G Myl3 myosin light chain 3 IEP RGD PMID:2717409 RGD:633442 NCBI chr 8:110,738,669...110,744,814
Ensembl chr 8:110,738,661...110,744,816
JBrowse link
G Myl6 myosin light chain 6 involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813 NCBI chr 7:910,764...914,062
Ensembl chr 7:910,774...933,791
JBrowse link
G Myl6l myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-like involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813
G Mylpf myosin light chain, phosphorylatable, fast skeletal muscle involved_in IEP
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:3773777|PMID:17356007)
UniProt
RGD
PMID:17356007 PMID:6179945 PMID:21873635 GO_REF:0000024 MGI:3773777, RGD:633441, RGD:13792537 NCBI chr 1:181,829,703...181,832,546
Ensembl chr 1:181,829,743...181,832,545
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
PMID:14762206
MGI:1857221|MGI:94909|MGI:97252 (MGI:2180395|PMID:12037571), (MGI:3027696|PMID:14762206), (MGI:3586427|PMID:12895031), (MGI:3849775|PMID:19531352), (MGI:64468|PMID:8269513)
RGD PMID:8269513 PMID:12037571 PMID:12895031 PMID:14762206 PMID:19531352 More... MGI:2180395 MGI:3027696 MGI:3586427 MGI:3849775 MGI:64468, RGD:8554476 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) RGD PMID:14762206 MGI:3027696 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Myoz1 myozenin 1 involved_in ISO (MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:3831256 NCBI chr15:3,644,333...3,651,584
Ensembl chr15:3,644,368...3,652,884
JBrowse link
G Myoz2 myozenin 2 involved_in ISO (MGI:3513659|PMID:15543153) RGD PMID:15543153 MGI:3513659 NCBI chr 2:211,141,463...211,168,202
Ensembl chr 2:211,141,463...211,168,221
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEP RGD PMID:9839950 RGD:5688344 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 IEP RGD PMID:12213446 RGD:2302390 NCBI chr 1:246,066,642...246,152,890
Ensembl chr 1:246,067,100...246,152,903
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
Ensembl
RGD
PMID:7926784 GO_REF:0000107 MGI:66069 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA
ISO
GO_REF:0000107
(MGI:3849657|PMID:19470472)
Ensembl
RGD
PMID:19470472 GO_REF:0000107 MGI:3849657 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:2385933|MGI:3579117|MGI:3579118 (MGI:3525754|PMID:15572686), (MGI:3609470|PMID:16251273)
MGI:3579117|MGI:3579118 (MGI:3609470|PMID:16251273)
RGD PMID:15572686 PMID:16251273 MGI:3525754 MGI:3609470 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (MGI:1889987|PMID:11030621) RGD PMID:11030621 MGI:1889987 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
G Pdlim3 PDZ and LIM domain 3 NOT|acts_upstream_of_or_within ISO MGI:2385940 (MGI:1930426|PMID:11238905) RGD PMID:11238905 MGI:1930426 NCBI chr16:46,352,460...46,383,680
Ensembl chr16:46,352,467...46,383,657
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857880 (MGI:1347482|PMID:10572050) RGD PMID:10572050 MGI:1347482 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Plec plectin involved_in ISO MGI:2181791 (MGI:1350765|PMID:9389647) RGD PMID:9389647 MGI:1350765 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Popdc2 popeye domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:62,351,843...62,398,688
Ensembl chr11:62,374,759...62,390,756
JBrowse link
G Popdc3 popeye domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:48,772,382...48,800,364
Ensembl chr20:48,772,462...48,800,593
JBrowse link
G Rcan1 regulator of calcineurin 1 IEP RGD PMID:15219871 RGD:1304341 NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:2175934|PMID:11877460) RGD PMID:11877460 MGI:2175934 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within
involved_in
ISO MGI:3776873 (MGI:6490679|PMID:32878913) RGD PMID:32878913 MGI:6490679 NCBI chr 6:128,543,904...128,549,384
Ensembl chr 6:128,543,939...128,549,182
JBrowse link
G Rxrg retinoid X receptor gamma IEP RGD PMID:9389449 RGD:633976 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link
G Sgce sarcoglycan, epsilon IEP RGD PMID:14625080 RGD:1303966 NCBI chr 4:32,771,477...32,842,238
Ensembl chr 4:32,771,477...32,842,254
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399) RGD PMID:11171399 MGI:1929969 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sin3b SIN3 transcription regulator family member B involved_in ISO (MGI:3687784|PMID:10620510) RGD PMID:10620510 MGI:3687784 NCBI chr16:17,123,277...17,160,070
Ensembl chr16:17,123,434...17,159,978
JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3715562|PMID:17592144)
MGI:106034 (MGI:3578604|PMID:15788460)
RGD PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within
involved_in
ISO MGI:102780 (MGI:3578604|PMID:15788460)
(MGI:3715562|PMID:17592144)
RGD PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
G Skil SKI-like proto-oncogene involved_in ISO (PMID:17202138) RGD PMID:17202138 NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
JBrowse link
G Srpk3 SRSF protein kinase 3 acts_upstream_of_or_within ISO (MGI:3588628|PMID:16140986) RGD PMID:16140986 MGI:3588628 NCBI chr  X:151,510,452...151,515,208
Ensembl chr  X:151,510,539...151,515,198
JBrowse link
G Svil supervillin involved_in ISO (PMID:12711699) RGD PMID:12711699 NCBI chr17:52,648,502...52,844,114
Ensembl chr17:52,648,502...52,793,404
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) RGD PMID:17043667 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP RGD PMID:16439574 RGD:2302095 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Vamp5 vesicle-associated membrane protein 5 acts_upstream_of_or_within ISO (MGI:1858282|PMID:9725904) RGD PMID:9725904 MGI:1858282 NCBI chr 4:104,423,813...104,435,059
Ensembl chr 4:104,423,820...104,426,212
JBrowse link
G Vgll2 vestigial-like family member 2 acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) RGD PMID:14762206 MGI:3027696 NCBI chr20:31,409,529...31,415,408
Ensembl chr20:31,409,552...31,415,408
JBrowse link
G Vrk3 VRK serine/threonine kinase 3 involved_in ISO FB:FBgn0027504 (PMID:35140224) RGD PMID:35140224 NCBI chr 1:95,243,344...95,270,780
Ensembl chr 1:95,243,364...95,270,780
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 involved_in ISS
ISO
GO_REF:0000024
(MGI:4418579|PMID:20059953)
UniProt
RGD
PMID:20059953 GO_REF:0000024 MGI:4418579 NCBI chr13:89,439,633...89,447,958
Ensembl chr13:89,439,420...89,448,862
JBrowse link
branchiomeric skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msc musculin involved_in ISO UniProtKB:O35437 (MGI:3653784|PMID:12493912) RGD PMID:12493912 MGI:3653784 NCBI chr 5:4,547,335...4,553,206
Ensembl chr 5:4,547,405...4,553,203
JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within ISO MGI:2384494 (MGI:3706272|PMID:17384148) RGD PMID:17384148 MGI:3706272 NCBI chr17:8,794,134...8,800,292
Ensembl chr17:8,794,134...8,800,291
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O88940 (MGI:3653784|PMID:12493912)
UniProt
RGD
PMID:12493912 GO_REF:0000024 MGI:3653784 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856326 (MGI:3613415|PMID:14618389)
GO_REF:0000107
RGD
Ensembl
PMID:14618389 GO_REF:0000107 MGI:3613415 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:12630957) RGD PMID:12630957 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
G Myh15 myosin, heavy chain 15 IEP RGD PMID:19948655 RGD:2317122 NCBI chr11:51,621,924...51,763,037
Ensembl chr11:51,622,413...51,762,971
JBrowse link
G Myom1 myomesin 1 IEP RGD PMID:12878677 RGD:633368 NCBI chr 9:110,916,156...111,039,344
Ensembl chr 9:110,915,943...111,039,344
JBrowse link
G Myom2 myomesin 2 IEP RGD PMID:12878677 RGD:633368 NCBI chr16:74,520,148...74,592,658
Ensembl chr16:74,520,157...74,592,772
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:1857846 (MGI:3624183|PMID:16638982), (MGI:4881620|PMID:21035439) RGD PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
negative regulation of satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin1 akirin 1 involved_in ISO (MGI:6201977|PMID:18255059) RGD PMID:18255059 MGI:6201977 NCBI chr 5:135,989,378...136,004,782
Ensembl chr 5:135,989,465...136,004,762
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5897527|PMID:27446912)
UniProt
RGD
PMID:27446912 GO_REF:0000024 MGI:5897527 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Mstn myostatin involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 9:48,453,982...48,458,809
Ensembl chr 9:48,452,533...48,458,933
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:4836102|PMID:20696153) RGD PMID:20696153 MGI:4836102 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 acts_upstream_of_or_within ISO (MGI:5476405|PMID:23300487) RGD PMID:23300487 MGI:5476405 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Myocd myocardin involved_in ISO
IEA
(PMID:18451334)
GO_REF:0000107
RGD
Ensembl
PMID:18451334 GO_REF:0000107 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G S100b S100 calcium binding protein B IMP RGD PMID:20069545 RGD:5508829 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:2676890 (MGI:4839883|PMID:20534588) RGD PMID:20534588 MGI:4839883 NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:9770491)
GO_REF:0000024
RGD
UniProt
PMID:9770491 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) RGD PMID:20124407 MGI:4838954 NCBI chr  X:104,217,898...104,277,935
Ensembl chr  X:104,217,925...104,276,861
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) RGD PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5315325|PMID:21971047)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21971047 GO_REF:0000024 GO_REF:0000107 MGI:5315325 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
G Ybx3 Y box binding protein 3 acts_upstream_of_or_within ISO (MGI:3808638|PMID:18676817) RGD PMID:18676817 MGI:3808638 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161
JBrowse link
negative regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mstn myostatin acts_upstream_of_or_within
involved_in
IMP
ISO
MGI:2148177|MGI:3778375 (MGI:3776975|PMID:18286185)
(MGI:2176357|PMID:11877467), (MGI:4948370|PMID:21390326), (MGI:5544527|PMID:24076600), (MGI:87393|PMID:9139826)
(PMID:15215484)
RGD PMID:9139826 PMID:11877467 PMID:15215484 PMID:18286185 PMID:21390326 More... MGI:2176357 MGI:3776975 MGI:4948370 MGI:5544527 MGI:87393, RGD:1601299 NCBI chr 9:48,453,982...48,458,809
Ensembl chr 9:48,452,533...48,458,933
JBrowse link
G Tll2 tolloid-like 2 acts_upstream_of_or_within ISO MGI:3778379 (MGI:3776975|PMID:18286185) RGD PMID:18286185 MGI:3776975 NCBI chr 1:239,916,017...240,027,916
Ensembl chr 1:239,915,508...240,028,120
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISO MGI:2384080|MGI:2677631 (MGI:6269164|PMID:28370195) RGD PMID:28370195 MGI:6269164 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2384080|MGI:2677631 (MGI:6269164|PMID:28370195) RGD PMID:28370195 MGI:6269164 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (MGI:5605930|PMID:25014022) RGD PMID:25014022 MGI:5605930 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5553223|PMID:23525013)
UniProt
RGD
PMID:23525013 GO_REF:0000024 MGI:5553223 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Gpc1 glypican 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:20100867)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20100867 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:93,396,234...93,424,047
Ensembl chr 9:93,396,234...93,424,047
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:21556048)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21556048 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within ISO (MGI:5566551|PMID:24532688) RGD PMID:24532688 MGI:5566551 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134 (MGI:1928555|PMID:11146504) RGD PMID:11146504 MGI:1928555 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin involved_in IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(MGI:62381|PMID:8393145)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8393145 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:62381, RGD:13792537 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO
IEA
(MGI:4946446|PMID:21156168)
GO_REF:0000107
RGD
Ensembl
PMID:21156168 GO_REF:0000107 MGI:4946446 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) RGD PMID:25313962 MGI:6148527 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (MGI:5619733|PMID:23460868) RGD PMID:23460868 MGI:5619733 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:5634880 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19388010 RGD:2317940 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:9770491)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9770491 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within ISO MGI:97376 (MGI:4839883|PMID:20534588) RGD PMID:20534588 MGI:4839883 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO MGI:3029359 (MGI:5569711|PMID:23926128) RGD PMID:23926128 MGI:5569711 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399)
Ensembl
RGD
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) RGD PMID:11856745 MGI:2179189 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) RGD PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5608606|PMID:25220152)
Ensembl
UniProt
RGD
PMID:25220152 GO_REF:0000024 GO_REF:0000107 MGI:5608606 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (MGI:6120647|PMID:29440408) RGD PMID:29440408 MGI:6120647 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IMP RGD PMID:16408196 RGD:1643018 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:3809313 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3809313|PMID:18816858)
UniProt
RGD
PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx17 DEAD-box helicase 17 involved_in ISO
IEA
(PMID:17011493)
GO_REF:0000107
RGD
Ensembl
PMID:17011493 GO_REF:0000107 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (MGI:5315343|PMID:17011493) RGD PMID:17011493 MGI:5315343 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Klhl41 kelch-like family member 41 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5424274|PMID:22562206)
RGD PMID:22562206 PMID:21873635 MGI:5424274, RGD:13792537 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5526938|PMID:15623503)
UniProt
Ensembl
RGD
PMID:15623503 GO_REF:0000024 GO_REF:0000107 MGI:5526938 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 acts_upstream_of_or_within ISO (MGI:5485311|PMID:23349951) RGD PMID:23349951 MGI:5485311 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:4836102|PMID:20696153) RGD PMID:20696153 MGI:4836102 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5520038|PMID:22363741)
UniProt
RGD
PMID:22363741 GO_REF:0000024 MGI:5520038 NCBI chr20:5,202,837...5,214,541
Ensembl chr20:5,202,837...5,214,164
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239)
GO_REF:0000107
RGD
Ensembl
PMID:17786239 GO_REF:0000107 MGI:3763703 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
JBrowse link
G Nln neurolysin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4125183 (MGI:5588076|PMID:24719333)
Ensembl
RGD
PMID:24719333 GO_REF:0000107 MGI:5588076 NCBI chr 2:35,133,634...35,232,927
Ensembl chr 2:35,134,145...35,232,914
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEP PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Megf10 multiple EGF-like domains 10 involved_in ISO (PMID:22101682) RGD PMID:22101682 NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4881345 (MGI:4879035|PMID:21177349) RGD PMID:21177349 MGI:4879035 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3701154|PMID:17194759)
UniProt
RGD
PMID:17194759 GO_REF:0000024 MGI:3701154 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919
JBrowse link
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566
JBrowse link
G Ankrd33 ankyrin repeat domain 33 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:132,224,299...132,228,106
Ensembl chr 7:132,225,090...132,227,845
JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854
JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
JBrowse link
G Barx2 BARX homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2651740|PMID:12486129)
GO_REF:0000107
RGD
Ensembl
PMID:12486129 GO_REF:0000107 MGI:2651740 NCBI chr 8:30,251,132...30,319,105
Ensembl chr 8:30,251,132...30,319,013
JBrowse link
G Bcl9 BCL9, transcription coactivator acts_upstream_of_or_within ISO MGI:1933114|MGI:98956 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr 2:184,760,616...184,846,261
Ensembl chr 2:184,760,618...184,786,435
JBrowse link
G Bcl9l BCL9 like acts_upstream_of_or_within ISO MGI:1924828|MGI:98956 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr 8:44,811,977...44,840,611
Ensembl chr 8:44,811,977...44,840,611
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 3:113,084,174...113,110,090
Ensembl chr 3:113,084,176...113,109,947
JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IEP RGD PMID:16682826 RGD:10401256 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183
JBrowse link
G Egr1 early growth response 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Egr2 early growth response 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5300631|PMID:22147266)
(MGI:3695113|PMID:11509834)
UniProt
RGD
PMID:11509834 PMID:22147266 GO_REF:0000024 MGI:3695113 MGI:5300631 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
JBrowse link
G Emd emerin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2385045 (MGI:4366679|PMID:19720741)
Ensembl
RGD
PMID:19720741 GO_REF:0000107 MGI:4366679 NCBI chr  X:152,038,990...152,042,190
Ensembl chr  X:152,038,998...152,045,807
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Foxn2 forkhead box N2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:6,018,653...6,065,216
Ensembl chr 6:6,018,879...6,064,278
JBrowse link
G Gtf3c5 general transcription factor IIIC subunit 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 3:11,893,867...11,914,187
Ensembl chr 3:11,893,875...11,914,180
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
JBrowse link
G Hivep3 HIVEP zinc finger 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:133,325,327...133,727,797
Ensembl chr 5:133,658,052...133,727,795
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr10:75,154,244...75,211,884
Ensembl chr10:75,154,507...75,211,935
JBrowse link
G Hmg20b high mobility group 20 B acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:8,368,934...8,373,650
Ensembl chr 7:8,368,990...8,373,640
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Klhl41 kelch-like family member 41 involved_in ISS
ISO
GO_REF:0000024
(MGI:5424274|PMID:22562206)
UniProt
RGD
PMID:22562206 GO_REF:0000024 MGI:5424274 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Kras KRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:97874 (MGI:3511080|PMID:15542848) RGD PMID:15542848 MGI:3511080 NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741)
UniProtKB:O08579 (PMID:19720741)
RGD PMID:19720741 MGI:4366679 NCBI chr20:5,282,397...5,296,621
Ensembl chr20:5,282,397...5,296,626
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741) RGD PMID:19720741 MGI:4366679 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
G Maff MAF bZIP transcription factor F acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:110,912,499...110,923,851
Ensembl chr 7:110,912,499...110,923,851
JBrowse link
G Med20 mediator complex subunit 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300631|PMID:22147266)
GO_REF:0000107
RGD
Ensembl
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr 9:13,370,146...13,382,756
Ensembl chr 9:13,370,146...13,382,476
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mef2d myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr 2:173,606,054...173,635,620
Ensembl chr 2:173,606,490...173,634,457
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myf5 myogenic factor 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5300631|PMID:22147266)
RGD PMID:22147266 PMID:21873635 MGI:5300631, RGD:13792537 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Myf6 myogenic factor 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5300631|PMID:22147266)
RGD PMID:22147266 PMID:21873635 MGI:5300631, RGD:13792537 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in ISO (PMID:21556048) RGD PMID:21556048 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5706660|PMID:26658965)
(MGI:5300631|PMID:22147266)
RGD PMID:22147266 PMID:26658965 PMID:21873635 MGI:5300631 MGI:5706660, RGD:13792537 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Ngfr nerve growth factor receptor IEP RGD PMID:16723531 RGD:1580249 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO (MGI:4360820|PMID:19723804) RGD PMID:19723804 MGI:4360820 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
JBrowse link
G Plagl1 PLAG1 like zinc finger 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:7,477,295...7,517,229
Ensembl chr 1:7,477,177...7,517,228
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96680 (MGI:3511080|PMID:15542848), (MGI:5300631|PMID:22147266)
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:15542848 PMID:22147266 GO_REF:0000107 MGI:3511080 MGI:5300631 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Sap30 Sin3A associated protein 30 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr16:32,747,739...32,753,114
Ensembl chr16:32,747,734...32,753,112
JBrowse link
G Scx scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Smyd1 SET and MYND domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
JBrowse link
G Snw1 SNW domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Sox11 SRY-box transcription factor 11 acts_upstream_of_or_within ISO (MGI:5297659|PMID:20847309) RGD PMID:20847309 MGI:5297659 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1924828|MGI:1933114 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Zfp689 zinc finger protein 689 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:182,065,885...182,074,343
Ensembl chr 1:182,065,826...182,076,679
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in ISS
ISO
GO_REF:0000024
(MGI:78319|PMID:2731651)
UniProt
RGD
PMID:2731651 GO_REF:0000024 MGI:78319 NCBI chr19:51,883,713...51,886,725
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Actn1 actinin, alpha 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of ISO MGI:1857134 (MGI:1928555|PMID:11146504) RGD PMID:11146504 MGI:1928555 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO MGI:3512131 (MGI:5517720|PMID:23872330) RGD PMID:23872330 MGI:5517720 NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856326 (MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749), (MGI:66718|PMID:8143864)
GO_REF:0000107
RGD
Ensembl
PMID:289331 PMID:8143864 PMID:8462749 GO_REF:0000107 MGI:3630139 MGI:53207 MGI:66718 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:2180372 (MGI:3695802|PMID:17200204)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17200204 GO_REF:0000024 GO_REF:0000107 MGI:3695802 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Dner delta/notch-like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) RGD PMID:15965470 MGI:3583881 NCBI chr 9:85,586,985...85,902,820
Ensembl chr 9:85,586,987...85,902,637
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3662804|PMID:16962942)
Ensembl
RGD
PMID:16962942 GO_REF:0000107 MGI:3662804 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Homer1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526529 (MGI:3784629|PMID:18268005)
Ensembl
RGD
PMID:18268005 GO_REF:0000107 MGI:3784629 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO MGI:103569 (MGI:5550316|PMID:24405768) RGD PMID:24405768 MGI:5550316 NCBI chr 4:70,568,241...70,585,666
Ensembl chr 4:70,568,243...70,585,631
JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5700633|PMID:25940086)
MGI:4843038 (MGI:5586592|PMID:24960163)
RGD PMID:24960163 PMID:25940086 PMID:21873635 MGI:5586592 MGI:5700633, RGD:13792537 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G Klhl41 kelch-like family member 41 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) RGD PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857667 (MGI:62381|PMID:8393145)
GO_REF:0000107
RGD
Ensembl
PMID:8393145 GO_REF:0000107 MGI:62381 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Myorg myogenesis regulating glycosidase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:19706595)
(MGI:4422154|PMID:19706595)
PMID:21873635
RGD PMID:19706595 PMID:21873635 MGI:4422154, RGD:13792537 NCBI chr 5:56,654,257...56,664,467
Ensembl chr 5:56,648,643...56,664,440
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:2182778 (MGI:1933051|PMID:11254352) RGD PMID:11254352 MGI:1933051 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687349 (MGI:3766888|PMID:17706883)
Ensembl
RGD
PMID:17706883 GO_REF:0000107 MGI:3766888 NCBI chr12:46,338,979...46,342,891
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G Plec plectin involved_in ISO MGI:3799315 (MGI:3797705|PMID:18490514), (MGI:5567855|PMID:24487589) RGD PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3586394|PMID:16024798)
(MGI:3641363|PMID:12773574)
GO_REF:0000024
RGD
UniProt
PMID:12773574 PMID:16024798 GO_REF:0000024 MGI:3586394 MGI:3641363 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in ISS
ISO
GO_REF:0000024
(MGI:3641363|PMID:12773574)
UniProt
RGD
PMID:12773574 GO_REF:0000024 MGI:3641363 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981
JBrowse link
G Rcan1 regulator of calcineurin 1 acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3764002|PMID:18003898)
UniProt
RGD
PMID:18003898 GO_REF:0000024 MGI:3764002 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Selenon selenoprotein N involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5494499|PMID:23325319)
RGD PMID:23325319 PMID:21873635 MGI:5494499, RGD:13792537 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059
JBrowse link
G Six1 SIX homeobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:1095997 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:3573783 (MGI:5438143|PMID:22987639)
Ensembl
RGD
PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO MGI:6451766 (MGI:6141536|PMID:28237315) RGD PMID:28237315 MGI:6141536 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) RGD PMID:23626854 MGI:5508972 NCBI chr 7:63,343,078...63,350,590
Ensembl chr 7:63,343,186...63,350,589
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
G Xk X-linked Kx blood group involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346053 (MGI:5550316|PMID:24405768)
Ensembl
RGD
PMID:24405768 GO_REF:0000107 MGI:5550316 NCBI chr  X:13,436,412...13,472,830
Ensembl chr  X:13,436,418...13,472,830
JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
ISO (MGI:5700633|PMID:25940086)
(MGI:5565628|PMID:24361185)
RGD PMID:24361185 PMID:25940086 MGI:5565628 MGI:5700633 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857796 (MGI:3621570|PMID:15238161)
GO_REF:0000107
RGD
Ensembl
PMID:15238161 GO_REF:0000107 MGI:3621570 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
skeletal muscle satellite cell commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (MGI:1889987|PMID:11030621) RGD PMID:11030621 MGI:1889987 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
skeletal muscle satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (MGI:5823533|PMID:27743478) RGD PMID:27743478 MGI:5823533 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Megf10 multiple EGF-like domains 10 involved_in ISO (PMID:22101682)
(MGI:5319607|PMID:18056409)
RGD PMID:18056409 PMID:22101682 MGI:5319607 NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5013486|PMID:21556048)
Ensembl
RGD
PMID:21556048 GO_REF:0000107 MGI:5013486 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO MGI:4946396 (MGI:4936779|PMID:21131290) RGD PMID:21131290 MGI:4936779 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059
JBrowse link
skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit involved_in ISO (PMID:18252226) RGD PMID:18252226 NCBI chr 3:58,454,763...58,469,832
Ensembl chr 3:58,454,744...58,469,840
JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit involved_in ISO (PMID:18252226) RGD PMID:18252226 NCBI chr 9:87,862,417...87,870,833
Ensembl chr 9:87,862,407...87,870,833
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IDA RGD PMID:21235761 RGD:5130936 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5442624|PMID:22940113)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22940113 GO_REF:0000024 GO_REF:0000107 MGI:5442624 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G P2rx5 purinergic receptor P2X 5 TAS RGD PMID:12135987 RGD:729229 NCBI chr10:57,777,737...57,789,426
Ensembl chr10:57,777,819...57,789,423
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    developmental process 6897
      anatomical structure development 6372
        tissue development 2186
          muscle tissue development 509
            skeletal muscle tissue development 216
              branchiomeric skeletal muscle development + 3
              extraocular skeletal muscle development + 6
              negative regulation of skeletal muscle tissue development + 7
              positive regulation of skeletal muscle tissue development + 24
              regulation of skeletal muscle tissue development + 34
              skeletal muscle cell differentiation + 85
              skeletal muscle fiber development + 44
              skeletal muscle satellite stem cell asymmetric division + 0
              skeletal muscle tissue growth + 13
Path 2
Term Annotations click to browse term
  biological_process 18737
    developmental process 6897
      anatomical structure development 6372
        animal organ development 4165
          muscle organ development 365
            skeletal muscle organ development 232
              skeletal muscle tissue development 216
                branchiomeric skeletal muscle development + 3
                extraocular skeletal muscle development + 6
                negative regulation of skeletal muscle tissue development + 7
                positive regulation of skeletal muscle tissue development + 24
                regulation of skeletal muscle tissue development + 34
                skeletal muscle cell differentiation + 85
                skeletal muscle fiber development + 44
                skeletal muscle satellite stem cell asymmetric division + 0
                skeletal muscle tissue growth + 13
paths to the root