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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle organ development
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Accession:GO:0007517 term browser browse the term
Definition:The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.


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muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:8468325 RGD:5490217 NCBI chr 3:11,652,143...11,659,135 JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:8468325 RGD:5490217 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:1857484 (MGI:1098911|PMID:9374397) RGD PMID:9374397 MGI:1098911 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Cavin4 caveolae associated protein 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:64,413,005...64,420,849
Ensembl chr 5:64,412,895...64,423,725
JBrowse link
G Cd164 CD164 molecule involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:46,250,418...46,261,994
Ensembl chr20:46,250,363...46,261,994
JBrowse link
G Chat choline O-acetyltransferase acts_upstream_of_or_within ISO MGI:3045900 (MGI:3045889|PMID:12441053) RGD PMID:12441053 MGI:3045889 NCBI chr16:8,576,858...8,686,131
Ensembl chr16:8,577,840...8,686,131
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 involved_in ISO (MGI:5532896|PMID:22569126) RGD PMID:22569126 MGI:5532896 NCBI chr 1:134,757,934...134,873,053
Ensembl chr 1:134,757,934...134,871,167
JBrowse link
G Chkb choline kinase beta acts_upstream_of_or_within ISO MGI:3578417 (MGI:3623691|PMID:16371353) RGD PMID:16371353 MGI:3623691 NCBI chr 7:130,404,818...130,408,813
Ensembl chr 7:130,404,832...130,408,187
JBrowse link
G Coprs coordinator of PRMT5 and differentiation stimulator involved_in ISO (MGI:5487512|PMID:22193545) RGD PMID:22193545 MGI:5487512 NCBI chr16:80,826,681...80,831,791
Ensembl chr16:80,826,681...80,831,791
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO MGI:1916503 (MGI:2154007|PMID:11687538) RGD PMID:11687538 MGI:2154007 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:1856328 (MGI:3027425|PMID:14645204) RGD PMID:14645204 MGI:3027425 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Etv1 ETS variant transcription factor 1 acts_upstream_of_or_within ISO MGI:2384493|MGI:2384496 (MGI:2183841|PMID:10850491) RGD PMID:10850491 MGI:2183841 NCBI chr 6:58,467,215...58,558,640
Ensembl chr 6:58,467,254...58,558,631
JBrowse link
G Fhl1 four and a half LIM domains 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:159,112,516...159,172,528
Ensembl chr  X:159,112,880...159,172,524
JBrowse link
G Fhl4 four and a half LIM domains 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:26,138,959...26,144,492
Ensembl chr 7:26,139,664...26,144,466
JBrowse link
G Frg1 FSHD region gene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:53,957,858...53,978,865
Ensembl chr16:53,957,858...53,978,865
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:30770808)
(MGI:6287080|PMID:30770808)
MGI:3046846 (MGI:3046107|PMID:15128702)
GO_REF:0000024
RGD
UniProt
PMID:15128702 PMID:30770808 GO_REF:0000024 MGI:3046107 MGI:6287080 NCBI chr 2:120,529,716...120,570,356
Ensembl chr 2:120,512,899...120,570,355
JBrowse link
G H1f5 H1.5 linker histone, cluster member acts_upstream_of_or_within ISO PR:P13297 (MGI:3047475|PMID:15192231) RGD PMID:15192231 MGI:3047475 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:154,489,603...154,491,172
Ensembl chr 5:154,489,590...154,491,223
JBrowse link
G Jph1 junctophilin 1 acts_upstream_of_or_within ISO MGI:2183252 (MGI:2183615|PMID:12135771) RGD PMID:12135771 MGI:2183615 NCBI chr 5:1,417,414...1,511,754
Ensembl chr 5:1,417,478...1,511,416
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:219,000,844...219,050,211
Ensembl chr 1:219,000,844...219,050,211
JBrowse link
G Kremen1 kringle containing transmembrane protein 1 NAS RGD PMID:11267660 RGD:633127 NCBI chr14:85,441,209...85,503,661
Ensembl chr14:85,438,707...85,484,275
JBrowse link
G Ky kyphoscoliosis peptidase acts_upstream_of_or_within ISO MGI:1856928 (MGI:1929525|PMID:11136708) RGD PMID:11136708 MGI:1929525 NCBI chr 8:110,982,777...111,022,666
Ensembl chr 8:110,982,777...111,022,385
JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO MGI:1934917 (MGI:2670559|PMID:12921739) RGD PMID:12921739 MGI:2670559 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lbx1 ladybird homeobox 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:264,973,315...264,975,132
Ensembl chr 1:264,973,315...264,975,132
JBrowse link
G Lmna lamin A/C involved_in ISO (PMID:10080180) RGD PMID:10080180 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1858019|MGI:97487 (MGI:3505795|PMID:15376315) RGD PMID:15376315 MGI:3505795 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mkx mohawk homeobox involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:16408284)
RGD PMID:16408284, PMID:21873635 RGD:13792537 NCBI chr17:60,537,615...60,553,284
Ensembl chr17:60,537,935...60,549,750
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO UniProtKB:P43276 (MGI:3047475|PMID:15192231) RGD PMID:15192231 MGI:3047475 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219|MGI:97275|MGI:97276 (MGI:3525903|PMID:15634692), (MGI:79097|PMID:8587605) RGD PMID:8587605 PMID:15634692 MGI:3525903 MGI:79097 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO MGI:97252 (MGI:3047475|PMID:15192231), (MGI:3525903|PMID:15634692) RGD PMID:15192231 PMID:15634692 MGI:3047475 MGI:3525903 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000043
MGI:97252 (MGI:79097|PMID:8587605)
UniProt
RGD
PMID:8587605 GO_REF:0000043 MGI:79097 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO MGI:1928831 (MGI:2447214|PMID:12495620) RGD PMID:12495620 MGI:2447214 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:1856173|MGI:2687297|MGI:3047631|MGI:3047632 (MGI:3044235|PMID:15132998) RGD PMID:15132998 MGI:3044235 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Scn8a sodium voltage-gated channel alpha subunit 8 acts_upstream_of_or_within ISO MGI:2429911 (MGI:3042517|PMID:15170223) RGD PMID:15170223 MGI:3042517 NCBI chr 7:142,575,629...142,683,659
Ensembl chr 7:142,575,672...142,684,114
JBrowse link
G Sgcb sarcoglycan, beta involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179190 (MGI:3512717|PMID:15385444)
UniProt
RGD
PMID:15385444 GO_REF:0000024 MGI:3512717 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
JBrowse link
G Trim72 tripartite motif containing 72 involved_in ISS
ISO
GO_REF:0000024
(MGI:3839036|PMID:19043407)
UniProt
RGD
PMID:19043407 GO_REF:0000024 MGI:3839036 NCBI chr 1:199,450,042...199,457,902
Ensembl chr 1:199,449,973...199,457,895
JBrowse link
G Unc45a unc-45 myosin chaperone A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:142,118,910...142,135,219
Ensembl chr 1:142,118,917...142,133,627
JBrowse link
G Unc45b unc-45 myosin chaperone B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:70,262,340...70,290,445
Ensembl chr10:70,262,361...70,290,445
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
G Xbp1 X-box binding protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zbtb42 zinc finger and BTB domain containing 42 involved_in ISS
ISO
GO_REF:0000024
(PMID:25055871)
UniProt
RGD
PMID:25055871 GO_REF:0000024 NCBI chr 6:137,238,899...137,247,115
Ensembl chr 6:137,243,185...137,245,313
JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain involved_in ISO (MGI:5307011|PMID:21071432) RGD PMID:21071432 MGI:5307011 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:6158865|PMID:26711913) RGD PMID:26178373 PMID:26711913 MGI:5660411 MGI:6158865 NCBI chr 1:220,853,695...220,861,420
Ensembl chr 1:220,854,403...220,861,420
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO MGI:2676830 (MGI:4443305|PMID:19816508) RGD PMID:19816508 MGI:4443305 NCBI chr18:56,971,273...56,971,377
Ensembl chr18:56,971,273...56,971,377
JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO MGI:2676828 (MGI:4443305|PMID:19816508) RGD PMID:19816508 MGI:4443305 NCBI chr18:56,969,907...56,969,994
Ensembl chr18:56,969,907...56,969,994
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:21055718) RGD PMID:21055718 NCBI chr11:69,013,060...69,260,039
Ensembl chr11:69,013,050...69,223,158
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
atrial cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:10072785)
Ensembl
RGD
PMID:10072785 GO_REF:0000107 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Eng endoglin involved_in ISO (MGI:3721185|PMID:17628518) RGD PMID:17628518 MGI:3721185 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Myh6 myosin heavy chain 6 involved_in IEA
ISO
GO_REF:0000107
(PMID:15735645)
Ensembl
RGD
PMID:15735645 GO_REF:0000107 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Nog noggin involved_in IEA
ISO
GO_REF:0000107
(MGI:3783944|PMID:17218603)
Ensembl
RGD
PMID:17218603 GO_REF:0000107 MGI:3783944 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2136268 (MGI:2135655|PMID:11493526) RGD PMID:11493526 MGI:2135655 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Tnnt2 troponin T2, cardiac type acts_upstream_of_or_within ISO MGI:3692448|MGI:3692450|MGI:3692451 (MGI:1342889|PMID:10449439) RGD PMID:10449439 MGI:1342889 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:4361155 (MGI:4439199|PMID:20159597) RGD PMID:20159597 MGI:4439199 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
branchiomeric skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msc musculin involved_in ISO UniProtKB:O35437 (MGI:3653784|PMID:12493912) RGD PMID:12493912 MGI:3653784 NCBI chr 5:3,954,902...3,956,974
Ensembl chr 5:3,955,227...3,956,572
JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within ISO MGI:2384494 (MGI:3706272|PMID:17384148) RGD PMID:17384148 MGI:3706272 NCBI chr17:8,873,184...8,884,428
Ensembl chr17:8,878,270...8,884,423
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O88940 (MGI:3653784|PMID:12493912)
UniProt
RGD
PMID:12493912 GO_REF:0000024 MGI:3653784 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
cardiac muscle tissue growth involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5049789|PMID:21668976)
UniProt
RGD
PMID:21668976 GO_REF:0000024 MGI:5049789 NCBI chr 2:218,654,406...218,658,761
Ensembl chr 2:218,654,554...218,658,761
JBrowse link
cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within ISO MGI:2180072 (MGI:3606389|PMID:14605248) RGD PMID:14605248 MGI:3606389 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:19525294), (PMID:19608030) RGD PMID:19525294 PMID:19608030 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583785 (MGI:3611958|PMID:16314491)
Ensembl
RGD
PMID:16314491 GO_REF:0000107 MGI:3611958 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 acts_upstream_of_or_within ISO MGI:3690045 (MGI:3689683|PMID:16966370) RGD PMID:16966370 MGI:3689683 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in ISO
IEA
IBA
(PMID:16448786)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:16448786, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:148,386,185...148,397,851
Ensembl chr 3:148,386,189...148,399,501
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO (PMID:11889119)
(MGI:5285465|PMID:21640717)
RGD PMID:11889119 PMID:21640717 MGI:5285465 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:4947514|PMID:20007915) RGD PMID:20007915 MGI:4947514 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO (MGI:3604925|PMID:15843409) RGD PMID:15843409 MGI:3604925 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Tcap titin-cap involved_in IBA
ISO
PMID:21873635
(PMID:9817758)
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within
ISO (PMID:9817758)
MGI:3763610 (MGI:3760201|PMID:17360664)
RGD PMID:9817758 PMID:17360664 MGI:3760201 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Xirp2 xin actin-binding repeat containing 2 acts_upstream_of_or_within ISO MGI:4453315 (MGI:4438861|PMID:20360251) RGD PMID:20360251 MGI:4438861 NCBI chr 3:53,563,207...53,658,113
Ensembl chr 3:53,563,194...53,658,132
JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO (MGI:3583527|PMID:14614148) RGD PMID:14614148 MGI:3583527 NCBI chr19:55,094,585...55,150,994
Ensembl chr19:55,094,585...55,150,686
JBrowse link
diaphragm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IEP RGD PMID:9618389 RGD:4139909 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:9618389 RGD:4139909 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Disp1 dispatched RND transporter family member 1 involved_in ISO (PMID:20799323) RGD PMID:20799323 NCBI chr13:101,451,932...101,597,570
Ensembl chr13:101,451,932...101,597,570
JBrowse link
G Fgfrl1 fibroblast growth factor receptor-like 1 acts_upstream_of_or_within ISO MGI:3771861 (MGI:3771403|PMID:17986259) RGD PMID:17986259 MGI:3771403 NCBI chr14:2,020,110...2,032,169
Ensembl chr14:2,018,500...2,032,593
JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 IEP RGD PMID:12652645 RGD:9743957 NCBI chr 2:155,555,798...156,011,438
Ensembl chr 2:155,718,359...156,009,526
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO MGI:2182358|MGI:2182361|MGI:2182363 (MGI:1344237|PMID:10482234) RGD PMID:10482234 MGI:1344237 NCBI chr 4:2,376,350...2,381,308
Ensembl chr 4:2,376,958...2,381,271
JBrowse link
G Msc musculin involved_in ISO UniProtKB:O35437 (MGI:3653784|PMID:12493912) RGD PMID:12493912 MGI:3653784 NCBI chr 5:3,954,902...3,956,974
Ensembl chr 5:3,955,227...3,956,572
JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within ISO MGI:3765054 (MGI:3763794|PMID:17928203) RGD PMID:17928203 MGI:3763794 NCBI chr 3:177,281,365...177,341,550
Ensembl chr 3:177,310,753...177,341,547
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O88940 (MGI:3653784|PMID:12493912)
UniProt
RGD
PMID:12493912 GO_REF:0000024 MGI:3653784 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:62488|PMID:8395349)
UniProt
RGD
PMID:8395349 GO_REF:0000024 MGI:62488 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO MGI:1856326 (MGI:3613415|PMID:14618389) RGD PMID:14618389 MGI:3613415 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:12630957) RGD PMID:12630957 NCBI chr 8:107,194,492...107,197,644
Ensembl chr 8:107,194,551...107,195,675
JBrowse link
G Myh15 myosin, heavy chain 15 IEP RGD PMID:19948655 RGD:2317122 NCBI chr11:54,205,771...54,344,662
Ensembl chr11:54,204,775...54,344,615
JBrowse link
G Myom1 myomesin 1 IEP RGD PMID:12878677 RGD:633368 NCBI chr 9:119,353,840...119,469,196
Ensembl chr 9:119,353,840...119,468,715
JBrowse link
G Myom2 myomesin 2 IEP RGD PMID:12878677 RGD:633368 NCBI chr16:79,587,136...79,672,871
Ensembl chr16:79,587,640...79,671,719
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:1857846 (MGI:3624183|PMID:16638982), (MGI:4881620|PMID:21035439) RGD PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
left ventricular cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ryr2 ryanodine receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3713774 (MGI:3713015|PMID:17431507)
Ensembl
RGD
PMID:17431507 GO_REF:0000107 MGI:3713015 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3689643|PMID:16151019)
Ensembl
RGD
PMID:16151019 GO_REF:0000107 MGI:3689643 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
muscle attachment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
muscle organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3526852 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:21,713,900...21,881,193
Ensembl chr20:21,564,975...21,880,715
JBrowse link
G Cntf ciliary neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96787 (MGI:3575352|PMID:15716414)
Ensembl
RGD
PMID:15716414 GO_REF:0000107 MGI:3575352 NCBI chr 1:229,599,009...229,601,032
Ensembl chr 1:229,599,009...229,601,032
JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1857496 (MGI:76955|PMID:7555718) RGD PMID:7555718 MGI:76955 NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181618 (MGI:3575352|PMID:15716414)
Ensembl
RGD
PMID:15716414 GO_REF:0000107 MGI:3575352 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:98493 (MGI:3849775|PMID:19531352) RGD PMID:19531352 MGI:3849775 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 acts_upstream_of_or_within ISO MGI:3652355 (MGI:3619104|PMID:16415102) RGD PMID:16415102 MGI:3619104 NCBI chr 2:148,718,279...148,722,263
Ensembl chr 2:148,718,280...148,722,263
JBrowse link
G Smtnl1 smoothelin-like 1 acts_upstream_of_or_within ISO MGI:3796616 (MGI:3796498|PMID:18310078) RGD PMID:18310078 MGI:3796498 NCBI chr 3:72,207,150...72,219,209
Ensembl chr 3:72,207,113...72,219,246
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:97252 (MGI:3849775|PMID:19531352)
UniProt
RGD
PMID:19531352 GO_REF:0000024 MGI:3849775 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
JBrowse link
muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4840554 (MGI:4831065|PMID:20826656)
Ensembl
RGD
PMID:20826656 GO_REF:0000107 MGI:4831065 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973|MGI:3055340|MGI:97491 (MGI:3849775|PMID:19531352) RGD PMID:19531352 MGI:3849775 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO MGI:1913092 (MGI:3849775|PMID:19531352) RGD PMID:19531352 MGI:3849775 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:97252 (MGI:3849775|PMID:19531352) RGD PMID:19531352 MGI:3849775 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179190 (MGI:3849775|PMID:19531352)
UniProt
RGD
PMID:19531352 GO_REF:0000024 MGI:3849775 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
muscular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in ISO (MGI:3814273|PMID:18924235) RGD PMID:18924235 MGI:3814273 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1888513|MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1196625|MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO (MGI:2386835|PMID:12372254) RGD PMID:12372254 MGI:2386835 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577) RGD PMID:12773577 MGI:2663364 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1196625|MGI:1888513 (MGI:4837757|PMID:20940229) RGD PMID:20940229 MGI:4837757 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:218,003,018...218,006,942
Ensembl chr 1:218,003,018...218,006,942
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
negative regulation of muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 IDA RGD PMID:19057004 RGD:2306938 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Sfmbt1 Scm-like with four mbt domains 1 involved_in ISO
ISS
(PMID:23349461)
GO_REF:0000024
RGD
UniProt
PMID:23349461 GO_REF:0000024 NCBI chr16:6,775,648...6,896,155
Ensembl chr16:6,779,281...6,895,299
JBrowse link
negative regulation of planar cell polarity pathway involved in cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin1 akirin 1 involved_in ISO (MGI:6201977|PMID:18255059) RGD PMID:18255059 MGI:6201977 NCBI chr 5:141,415,226...141,430,627
Ensembl chr 5:141,415,075...141,430,659
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5897527|PMID:27446912)
UniProt
RGD
PMID:27446912 GO_REF:0000024 MGI:5897527 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Mstn myostatin involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 9:53,310,977...53,315,804
Ensembl chr 9:53,309,598...53,315,915
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:4836102|PMID:20696153) RGD PMID:20696153 MGI:4836102 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 acts_upstream_of_or_within ISO (MGI:5476405|PMID:23300487) RGD PMID:23300487 MGI:5476405 NCBI chr 3:112,227,486...112,278,408
Ensembl chr 3:112,228,720...112,278,408
JBrowse link
G Myocd myocardin involved_in ISO
IEA
(PMID:18451334)
GO_REF:0000107
RGD
Ensembl
PMID:18451334 GO_REF:0000107 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G S100b S100 calcium binding protein B IMP RGD PMID:20069545 RGD:5508829 NCBI chr20:13,130,633...13,142,856
Ensembl chr20:13,130,636...13,142,856
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:2676890 (MGI:4839883|PMID:20534588) RGD PMID:20534588 MGI:4839883 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:9770491)
GO_REF:0000024
RGD
UniProt
PMID:9770491 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) RGD PMID:20124407 MGI:4838954 NCBI chr  X:111,884,285...111,944,693
Ensembl chr  X:111,884,295...111,887,906
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) RGD PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5315325|PMID:21971047)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21971047 GO_REF:0000024 GO_REF:0000107 MGI:5315325 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
G Ybx3 Y box binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3808638|PMID:18676817)
Ensembl
RGD
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr 4:165,606,819...165,630,041
Ensembl chr 4:165,606,819...165,630,118
JBrowse link
negative regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mstn myostatin acts_upstream_of_or_within
involved_in
IMP
ISO
MGI:2148177|MGI:3778375 (MGI:3776975|PMID:18286185)
(MGI:2176357|PMID:11877467), (MGI:4948370|PMID:21390326), (MGI:5544527|PMID:24076600), (MGI:87393|PMID:9139826)
(PMID:15215484)
RGD PMID:9139826 PMID:11877467 PMID:15215484 PMID:18286185 PMID:21390326 PMID:24076600, PMID:16575154 MGI:2176357 MGI:3776975 MGI:4948370 MGI:5544527 MGI:87393, RGD:1601299 NCBI chr 9:53,310,977...53,315,804
Ensembl chr 9:53,309,598...53,315,915
JBrowse link
G Tll2 tolloid-like 2 acts_upstream_of_or_within ISO MGI:3778379 (MGI:3776975|PMID:18286185) RGD PMID:18286185 MGI:3776975 NCBI chr 1:260,348,905...260,460,791
Ensembl chr 1:260,348,905...260,460,791
JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:16723531 RGD:1580249 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:14749725) RGD PMID:14749725 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3656361|PMID:16936075)
Ensembl
RGD
PMID:16936075 GO_REF:0000107 MGI:3656361 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Luc7l LUC7-like acts_upstream_of_or_within ISO (MGI:3055693|PMID:15474286) RGD PMID:15474286 MGI:3055693 NCBI chr10:15,538,878...15,572,651
Ensembl chr10:15,538,872...15,568,638
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:12887892) RGD PMID:12887892 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Sox15 SRY-box transcription factor 15 acts_upstream_of_or_within ISO (MGI:1858709|PMID:10821863) RGD PMID:10821863 MGI:1858709 NCBI chr10:56,260,514...56,263,503
Ensembl chr10:56,260,514...56,263,503
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1201268|PMID:9520323) RGD PMID:9520323 MGI:1201268 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (MGI:5605930|PMID:25014022) RGD PMID:25014022 MGI:5605930 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
planar cell polarity pathway involved in cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857617 (MGI:4830282|PMID:19056682)
Ensembl
RGD
PMID:19056682 GO_REF:0000107 MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (MGI:5571433|PMID:24364879) RGD PMID:24364879 MGI:5571433 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5571433|PMID:24364879)
Ensembl
RGD
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5553223|PMID:23525013)
UniProt
RGD
PMID:23525013 GO_REF:0000024 MGI:5553223 NCBI chr 1:178,039,002...178,137,469
Ensembl chr 1:178,039,063...178,137,465
JBrowse link
G Gpc1 glypican 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:20100867)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20100867 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:99,998,275...100,026,818
Ensembl chr 9:99,998,275...100,026,818
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:21556048)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21556048 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within ISO (MGI:5566551|PMID:24532688) RGD PMID:24532688 MGI:5566551 NCBI chr 1:215,745,981...215,746,064
Ensembl chr 1:215,745,981...215,746,064
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:1928555|PMID:11146504)
Ensembl
RGD
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin involved_in IBA
ISO
ISS
PMID:21873635
(MGI:62381|PMID:8393145)
GO_REF:0000024
RGD
UniProt
PMID:8393145, PMID:21873635 GO_REF:0000024 MGI:62381, RGD:13792537 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) RGD PMID:25313962 MGI:6148527 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5619733|PMID:23460868)
Ensembl
RGD
PMID:23460868 GO_REF:0000107 MGI:5619733 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:5634880 NCBI chr20:3,427,890...3,438,418
Ensembl chr20:3,427,880...3,438,396
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19388010 RGD:2317940 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:9770491)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9770491 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO MGI:3029359 (MGI:5569711|PMID:23926128) RGD PMID:23926128 MGI:5569711 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399)
Ensembl
RGD
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) RGD PMID:11856745 MGI:2179189 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) RGD PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5608606|PMID:25220152)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25220152 GO_REF:0000024 GO_REF:0000107 MGI:5608606 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:6120647|PMID:29440408)
Ensembl
RGD
PMID:29440408 GO_REF:0000107 MGI:6120647 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IMP RGD PMID:16408196 RGD:1643018 NCBI chr10:73,824,200...73,865,503
Ensembl chr10:73,824,202...73,865,364
JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2676327 (MGI:3513707|PMID:15601660) RGD PMID:15601660 MGI:3513707 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Mrtfb myocardin related transcription factor B involved_in ISO (PMID:14565952) RGD PMID:14565952 NCBI chr10:1,151,163...1,273,269 JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:3809313 NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3809313|PMID:18816858)
UniProt
RGD
PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
post-embryonic cardiac muscle cell growth involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt6 sirtuin 6 IMP RGD PMID:22335191 RGD:9586060 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jph2 junctophilin 2 involved_in ISO (MGI:1861885|PMID:10949023) RGD PMID:10949023 MGI:1861885 NCBI chr 3:159,709,998...159,776,536
Ensembl chr 3:159,712,325...159,775,643
JBrowse link
regulation of muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:17011493) RGD PMID:17011493 NCBI chr 7:120,761,843...120,765,012
Ensembl chr 7:120,761,826...120,780,641
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (MGI:5315343|PMID:17011493) RGD PMID:17011493 MGI:5315343 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Klhl41 kelch-like family member 41 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5424274|PMID:22562206)
RGD PMID:22562206, PMID:21873635 MGI:5424274, RGD:13792537 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5526938|PMID:15623503)
UniProt
RGD
PMID:15623503 GO_REF:0000024 MGI:5526938 NCBI chr15:8,730,871...8,757,165
Ensembl chr15:8,730,871...8,757,165
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 acts_upstream_of_or_within ISO (MGI:5485311|PMID:23349951) RGD PMID:23349951 MGI:5485311 NCBI chr10:8,312,961...10,437,778
Ensembl chr10:8,312,961...8,654,892
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:4836102|PMID:20696153) RGD PMID:20696153 MGI:4836102 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5520038|PMID:22363741)
UniProt
RGD
PMID:22363741 GO_REF:0000024 MGI:5520038 NCBI chr20:5,712,200...5,723,902
Ensembl chr20:5,712,203...5,723,902
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3840749|PMID:19319192)
RGD PMID:19319192, PMID:21873635 MGI:3840749, RGD:13792537 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:53,487,367...54,358,694
Ensembl chr 6:53,488,883...54,059,119
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nln neurolysin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4125183 (MGI:5588076|PMID:24719333)
Ensembl
RGD
PMID:24719333 GO_REF:0000107 MGI:5588076 NCBI chr 2:34,086,970...34,185,835
Ensembl chr 2:34,087,880...34,185,812
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEP PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Megf10 multiple EGF-like domains 10 involved_in ISO (PMID:22101682) RGD PMID:22101682 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4881345 (MGI:4879035|PMID:21177349) RGD PMID:21177349 MGI:4879035 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3701154|PMID:17194759)
UniProt
RGD
PMID:17194759 GO_REF:0000024 MGI:3701154 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F acts_upstream_of_or_within ISO (MGI:1339480|PMID:10373470) RGD PMID:10373470 MGI:1339480 NCBI chr13:108,132,499...108,178,609
Ensembl chr13:108,132,499...108,178,609
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (MGI:5634219|PMID:25715398) RGD PMID:25715398 MGI:5634219 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
right ventricular cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:20807224)
Ensembl
RGD
PMID:20807224 GO_REF:0000107 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO (PMID:20807224) RGD PMID:20807224 NCBI chr 7:79,471,277...79,964,405
Ensembl chr 7:79,638,046...79,964,405
JBrowse link
right ventricular compact myocardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:2450311|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:261,281,859...261,291,307
Ensembl chr 1:261,281,543...261,291,394
JBrowse link
G Ankrd33 ankyrin repeat domain 33 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:142,755,896...142,759,666
Ensembl chr 7:142,756,312...142,759,629
JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:127,212,325...127,248,451
Ensembl chr 6:127,212,273...127,248,372
JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr13:109,817,892...109,849,632
Ensembl chr13:109,817,728...109,849,632
JBrowse link
G Bcl9 BCL9, transcription coactivator acts_upstream_of_or_within ISO MGI:1933114|MGI:98956 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr 2:199,334,644...199,420,083
Ensembl chr 2:199,334,664...199,354,793
JBrowse link
G Bcl9l BCL9 like acts_upstream_of_or_within ISO MGI:1924828|MGI:98956 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr 8:48,805,684...48,835,794
Ensembl chr 8:48,805,684...48,834,312
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 3:118,109,394...118,137,125
Ensembl chr 3:118,109,406...118,137,191
JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:129,754,295...129,760,045
Ensembl chr 5:129,756,149...129,758,986
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IEP RGD PMID:16682826 RGD:10401256 NCBI chr 7:11,401,501...11,406,771
Ensembl chr 7:11,401,501...11,406,771
JBrowse link
G Egr1 early growth response 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Egr2 early growth response 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5300631|PMID:22147266)
(MGI:3695113|PMID:11509834)
UniProt
RGD
PMID:11509834 PMID:22147266 GO_REF:0000024 MGI:3695113 MGI:5300631 NCBI chr20:22,452,170...22,461,018
Ensembl chr20:22,454,463...22,459,025
JBrowse link
G Emd emerin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2385045 (MGI:4366679|PMID:19720741)
Ensembl
RGD
PMID:19720741 GO_REF:0000107 MGI:4366679 NCBI chr  X:156,452,847...156,455,858
Ensembl chr  X:156,452,818...156,456,035
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Foxn2 forkhead box N2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:12,158,127...12,205,450
Ensembl chr 6:12,179,227...12,205,446
JBrowse link
G Gtf3c5 general transcription factor IIIC subunit 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 3:7,144,354...7,164,678
Ensembl chr 3:7,144,250...7,164,654
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905
JBrowse link
G Hivep3 HIVEP zinc finger 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:138,774,501...139,077,403
Ensembl chr 5:139,007,642...139,077,377
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr10:77,836,352...77,918,656
Ensembl chr10:77,840,568...77,918,191
JBrowse link
G Hmg20b high mobility group 20 B acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:11,238,594...11,243,312
Ensembl chr 7:11,238,630...11,243,310
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr15:83,703,796...83,722,921
Ensembl chr15:83,703,791...83,722,921
JBrowse link
G Klhl41 kelch-like family member 41 involved_in ISS
ISO
GO_REF:0000024
(MGI:5424274|PMID:22562206)
UniProt
RGD
PMID:22562206 GO_REF:0000024 MGI:5424274 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741)
UniProtKB:O08579 (PMID:19720741)
RGD PMID:19720741 MGI:4366679 NCBI chr20:5,779,742...5,786,213
Ensembl chr20:6,545,083...6,556,350
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741) RGD PMID:19720741 MGI:4366679 NCBI chr 7:62,976,671...63,045,860
Ensembl chr 7:62,996,336...63,045,728
JBrowse link
G Maff MAF bZIP transcription factor F acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:120,580,743...120,592,095
Ensembl chr 7:120,580,743...120,592,095
JBrowse link
G Med20 mediator complex subunit 20 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 9:15,379,379...15,393,131
Ensembl chr 9:15,379,385...15,393,131
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mef2d myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr 2:187,511,775...187,541,285
Ensembl chr 2:187,512,164...187,538,026
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myf5 myogenic factor 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5300631|PMID:22147266)
RGD PMID:22147266, PMID:21873635 MGI:5300631, RGD:13792537 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5300631|PMID:22147266)
RGD PMID:22147266, PMID:21873635 MGI:5300631, RGD:13792537 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in ISO (PMID:21556048) RGD PMID:21556048 NCBI chr 3:148,386,185...148,397,851
Ensembl chr 3:148,386,189...148,399,501
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:5706660|PMID:26658965)
(MGI:5300631|PMID:22147266)
PMID:21873635
Ensembl
RGD
PMID:22147266 PMID:26658965, PMID:21873635 GO_REF:0000107 MGI:5300631 MGI:5706660, RGD:13792537 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Ngfr nerve growth factor receptor IEP RGD PMID:16723531 RGD:1580249 NCBI chr10:83,389,828...83,408,061
Ensembl chr10:83,389,847...83,408,061
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:142,899,358...142,920,216
Ensembl chr 7:142,905,758...142,920,216
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO (MGI:4360820|PMID:19723804) RGD PMID:19723804 MGI:4360820 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 5:60,007,587...60,191,973
Ensembl chr 5:60,007,587...60,191,941
JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
JBrowse link
G Plagl1 PLAG1 like zinc finger 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:7,219,587...7,270,169
Ensembl chr 1:7,252,349...7,259,035
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5300631|PMID:22147266)
Ensembl
RGD
PMID:22147266 GO_REF:0000107 MGI:5300631 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Sap30 Sin3A associated protein 30 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr16:36,115,942...36,121,310
Ensembl chr16:36,116,258...36,121,097
JBrowse link
G Scx scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Smyd1 SET and MYND domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 4:99,071,122...99,125,143
Ensembl chr 4:99,074,535...99,125,111
JBrowse link
G Snw1 SNW domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Sox11 SRY-box transcription factor 11 acts_upstream_of_or_within ISO (MGI:5297659|PMID:20847309) RGD PMID:20847309 MGI:5297659 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:280,334,897...280,338,813
Ensembl chr 1:280,334,897...280,338,813
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1924828|MGI:1933114 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Zfp689 zinc finger protein 689 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 1:198,894,000...198,900,364
Ensembl chr 1:198,894,000...199,064,150
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in ISS
ISO
GO_REF:0000024
(MGI:78319|PMID:2731651)
UniProt
RGD
PMID:2731651 GO_REF:0000024 MGI:78319 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Actn1 actinin, alpha 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO MGI:3512131 (MGI:5517720|PMID:23872330) RGD PMID:23872330 MGI:5517720 NCBI chr15:51,799,339...51,818,697
Ensembl chr15:51,779,839...51,818,699
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO MGI:1856326 (MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749), (MGI:66718|PMID:8143864) RGD PMID:289331 PMID:8143864 PMID:8462749 MGI:3630139 MGI:53207 MGI:66718 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:2180372 (MGI:3695802|PMID:17200204)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17200204 GO_REF:0000024 GO_REF:0000107 MGI:3695802 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Dner delta/notch-like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) RGD PMID:15965470 MGI:3583881 NCBI chr 9:91,965,866...92,291,172
Ensembl chr 9:91,965,866...92,291,220
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3662804|PMID:16962942)
Ensembl
RGD
PMID:16962942 GO_REF:0000107 MGI:3662804 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Homer1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526529 (MGI:3784629|PMID:18268005)
Ensembl
RGD
PMID:18268005 GO_REF:0000107 MGI:3784629 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO MGI:103569 (MGI:5550316|PMID:24405768) RGD PMID:24405768 MGI:5550316 NCBI chr 4:70,979,504...70,996,920
Ensembl chr 4:70,979,504...70,996,395
JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5700633|PMID:25940086)
MGI:4843038 (MGI:5586592|PMID:24960163)
RGD PMID:24960163 PMID:25940086, PMID:21873635 MGI:5586592 MGI:5700633, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Klhl41 kelch-like family member 41 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) RGD PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3840749|PMID:19319192)
Ensembl
RGD
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin acts_upstream_of_or_within ISO MGI:1857667 (MGI:62381|PMID:8393145) RGD PMID:8393145 MGI:62381 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Myorg myogenesis regulating glycosidase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:19706595)
(MGI:4422154|PMID:19706595)
PMID:21873635
RGD PMID:19706595, PMID:21873635 MGI:4422154, RGD:13792537 NCBI chr 5:57,873,404...57,882,008
Ensembl chr 5:57,876,498...57,881,944
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:2182778 (MGI:1933051|PMID:11254352) RGD PMID:11254352 MGI:1933051 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687349 (MGI:3766888|PMID:17706883)
Ensembl
RGD
PMID:17706883 GO_REF:0000107 MGI:3766888 NCBI chr12:52,397,666...52,401,005
Ensembl chr12:52,397,792...52,401,015
JBrowse link
G Plec plectin involved_in ISO MGI:3799315 (MGI:3797705|PMID:18490514), (MGI:5567855|PMID:24487589) RGD PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chr 7:117,230,319...117,291,859
Ensembl chr 7:117,230,319...117,289,961
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr 2:241,909,332...242,186,861
Ensembl chr 2:241,909,832...242,184,854
JBrowse link
G Rcan1 regulator of calcineurin 1 acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr11:32,539,689...32,620,274
Ensembl chr11:32,539,683...32,550,539
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3764002|PMID:18003898)
UniProt
RGD
PMID:18003898 GO_REF:0000024 MGI:3764002 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Selenon selenoprotein N involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5494499|PMID:23325319)
RGD PMID:23325319, PMID:21873635 MGI:5494499, RGD:13792537 NCBI chr 5:152,748,497...152,765,489
Ensembl chr 5:152,750,284...152,762,165
JBrowse link
G Six1 SIX homeobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:1095997 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:3573783 (MGI:5438143|PMID:22987639)
Ensembl
RGD
PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) RGD PMID:23626854 MGI:5508972 NCBI chr 7:70,807,427...70,815,271
Ensembl chr 7:70,807,867...70,815,270
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Xk X-linked Kx blood group involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346053 (MGI:5550316|PMID:24405768)
Ensembl
RGD
PMID:24405768 GO_REF:0000107 MGI:5550316 NCBI chr  X:14,497,376...14,534,479
Ensembl chr  X:14,498,119...14,534,473
JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
ISO (MGI:5700633|PMID:25940086)
(MGI:5565628|PMID:24361185)
RGD PMID:24361185 PMID:25940086 MGI:5565628 MGI:5700633 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
skeletal muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntfr ciliary neurotrophic factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181046 (MGI:1352080|PMID:10526311)
Ensembl
RGD
PMID:10526311 GO_REF:0000107 MGI:1352080 NCBI chr 5:58,041,114...58,078,687
Ensembl chr 5:58,041,146...58,078,545
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO
IEA
(PMID:30770808)
(MGI:6287080|PMID:30770808)
GO_REF:0000107
RGD
Ensembl
PMID:30770808 GO_REF:0000107 MGI:6287080 NCBI chr 2:120,529,716...120,570,356
Ensembl chr 2:120,512,899...120,570,355
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 involved_in ISO (MGI:5547845|PMID:24132234) RGD PMID:24132234 MGI:5547845 NCBI chr19:12,481,563...12,945,320
Ensembl chr19:12,481,540...12,942,963
JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in IBA
ISO
PMID:21873635
(MGI:5903126|PMID:28569755), (MGI:5903127|PMID:28569745), (MGI:5904374|PMID:28386024)
RGD PMID:28386024 PMID:28569745 PMID:28569755, PMID:21873635 MGI:5903126 MGI:5903127 MGI:5904374, RGD:13792537 NCBI chr 9:17,781,397...17,783,074
Ensembl chr 9:17,782,395...17,782,664
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:1856174 (MGI:5568003|PMID:24443808) RGD PMID:24443808 MGI:5568003 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
skeletal muscle satellite cell commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (MGI:1889987|PMID:11030621) RGD PMID:11030621 MGI:1889987 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
skeletal muscle satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (MGI:5823533|PMID:27743478) RGD PMID:27743478 MGI:5823533 NCBI chr15:83,703,796...83,722,921
Ensembl chr15:83,703,791...83,722,921
JBrowse link
G Megf10 multiple EGF-like domains 10 involved_in ISO (PMID:22101682)
(MGI:5319607|PMID:18056409)
RGD PMID:18056409 PMID:22101682 MGI:5319607 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5013486|PMID:21556048)
Ensembl
RGD
PMID:21556048 GO_REF:0000107 MGI:5013486 NCBI chr 3:148,386,185...148,397,851
Ensembl chr 3:148,386,189...148,399,501
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO MGI:4946396 (MGI:4936779|PMID:21131290) RGD PMID:21131290 MGI:4936779 NCBI chr 5:152,748,497...152,765,489
Ensembl chr 5:152,750,284...152,762,165
JBrowse link
skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:26642364)
UniProt
RGD
PMID:26642364, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:50,439,885...50,474,678
Ensembl chr20:50,439,883...50,474,678
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO MGI:1856326 (MGI:52955|PMID:14300095), (MGI:56113|PMID:6500174), (MGI:63119|PMID:14300096), (MGI:76166|PMID:7635187) RGD PMID:6500174 PMID:7635187 PMID:14300095 PMID:14300096 MGI:52955 MGI:56113 MGI:63119 MGI:76166 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Casq1 calsequestrin 1 IEP RGD PMID:8600158 RGD:2313254 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (MGI:3695802|PMID:17200204)
Ensembl
RGD
PMID:17200204 GO_REF:0000107 MGI:3695802 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Ccnt2 cyclin T2 involved_in ISO (MGI:5706910|PMID:23060074) RGD PMID:23060074 MGI:5706910 NCBI chr13:44,475,959...44,516,892
Ensembl chr13:44,475,970...44,515,739
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within
involved_in
IEP
ISO
TAS
(MGI:892714|PMID:9191048)
PMID:11276227
RGD PMID:9191048, PMID:15208659, PMID:11276227 MGI:892714, RGD:1598429, RGD:8554712 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cfl2 cofilin 2 involved_in ISO (MGI:5784971|PMID:24598388) RGD PMID:24598388 MGI:5784971 NCBI chr 6:75,759,140...75,763,185
Ensembl chr 6:75,759,140...75,763,185
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 IEP RGD PMID:8086475 RGD:11565082 NCBI chr 3:113,318,559...113,324,459
Ensembl chr 3:113,318,563...113,324,461
JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 IEP RGD PMID:8086475 RGD:11565082 NCBI chr 2:21,422,680...21,452,797
Ensembl chr 2:21,422,818...21,437,193
JBrowse link
G Col19a1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO MGI:3053870 (MGI:3053247|PMID:15302855) RGD PMID:15302855 MGI:3053247 NCBI chr 9:30,508,003...30,864,836
Ensembl chr 9:30,515,089...30,844,199
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEP RGD PMID:1389227 RGD:727559 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Ctsb cathepsin B IEP RGD PMID:16497156 RGD:1599532 NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612
JBrowse link
G Dcn decorin IEP RGD PMID:17679144 RGD:2303553 NCBI chr 7:38,742,250...38,782,282
Ensembl chr 7:38,742,051...38,782,323
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:1856328|MGI:97275 (MGI:3586427|PMID:12895031), (MGI:3623691|PMID:16371353) RGD PMID:12895031 PMID:16371353 MGI:3586427 MGI:3623691 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) RGD PMID:22174839 MGI:5315068 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873
JBrowse link
G Eln elastin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2153007 (MGI:3027647|PMID:14614988)
Ensembl
RGD
PMID:14614988 GO_REF:0000107 MGI:3027647 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:2679374 (MGI:2677591|PMID:14517256) RGD PMID:14517256 MGI:2677591 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:8846777 RGD:2289973 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:8846777 RGD:2289973 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:2446071|PMID:11807098) RGD PMID:11807098 MGI:2446071 NCBI chr15:18,750,152...18,883,019
Ensembl chr15:18,750,118...18,883,005
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:2148705 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:1914004 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4839873|PMID:20576599)
Ensembl
RGD
PMID:20576599 GO_REF:0000107 MGI:4839873 NCBI chr 3:125,169,131...125,213,598
Ensembl chr 3:125,169,135...125,213,607
JBrowse link
G H19 H19, imprinted maternally expressed transcript (non-protein coding) IEP RGD PMID:7838525 RGD:2306191 NCBI chr 1:215,744,404...215,747,080 JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) RGD PMID:22174839 MGI:5315068 NCBI chr  X:15,396,185...15,417,486
Ensembl chr  X:15,295,473...15,316,671
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:2182089 (MGI:79044|PMID:8557196) RGD PMID:8557196 MGI:79044 NCBI chr13:102,637,967...102,643,376
Ensembl chr13:102,637,769...102,643,223
JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96210 (MGI:1350864|PMID:10642795) RGD PMID:10642795 MGI:1350864 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96202 (MGI:1350864|PMID:10642795)
Ensembl
RGD
PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:12909603 RGD:10059373 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Itga7 integrin subunit alpha 7 IEP RGD PMID:1315319 RGD:70774 NCBI chr 7:3,355,079...3,383,886
Ensembl chr 7:3,355,116...3,384,675
JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 IEP RGD PMID:12652645 RGD:9743957 NCBI chr 2:155,555,798...156,011,438
Ensembl chr 2:155,718,359...156,009,526
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3581988|PMID:15890335)
Ensembl
RGD
PMID:15890335 GO_REF:0000107 MGI:3581988 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 acts_upstream_of_or_within ISO MGI:3052922 (MGI:3655436|PMID:16717059) RGD PMID:16717059 MGI:3655436 NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:3718323 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2674242 (MGI:1340181|PMID:10403250)
Ensembl
RGD
PMID:10403250 GO_REF:0000107 MGI:1340181 NCBI chr 6:56,625,768...56,689,195
Ensembl chr 6:56,625,650...56,689,238
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857655 (MGI:76093|PMID:7651534) RGD PMID:7651534 MGI:76093 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mettl21c methyltransferase like 21C acts_upstream_of_or_within ISO (MGI:5781029|PMID:24677265) RGD PMID:24677265 MGI:5781029 NCBI chr 9:50,750,971...50,762,082
Ensembl chr 9:50,750,971...50,762,082
JBrowse link
G Mettl8 methyltransferase like 8 acts_upstream_of_or_within ISO (MGI:3582105|PMID:15992539) RGD PMID:15992539 MGI:3582105 NCBI chr 3:57,257,394...57,642,096 JBrowse link
G Msc musculin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:3,954,902...3,956,974
Ensembl chr 5:3,955,227...3,956,572
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973|MGI:3055340|MGI:97253|MGI:97275 (MGI:3849775|PMID:19531352), (MGI:64468|PMID:8269513) RGD PMID:8269513 PMID:19531352 MGI:3849775 MGI:64468 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO MGI:1857220|MGI:1927607|MGI:97252 (MGI:3849775|PMID:19531352), (MGI:72107|PMID:7720708), (MGI:76810|PMID:7588068) RGD PMID:7588068 PMID:7720708 PMID:19531352 MGI:3849775 MGI:72107 MGI:76810 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Myh14 myosin heavy chain 14 involved_in ISO (PMID:21480433) RGD PMID:21480433 NCBI chr 1:100,608,975...100,671,086
Ensembl chr 1:100,608,966...100,671,074
JBrowse link
G Myl3 myosin light chain 3 IEP RGD PMID:2717409 RGD:633442 NCBI chr 8:119,030,852...119,036,996
Ensembl chr 8:119,030,875...119,036,996
JBrowse link
G Myl6l myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-like involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813
G Mylpf myosin light chain, phosphorylatable, fast skeletal muscle involved_in IEP
ISO
(MGI:3773777|PMID:17356007) RGD PMID:17356007, PMID:6179945 MGI:3773777, RGD:633441 NCBI chr 1:198,655,835...198,658,590
Ensembl chr 1:198,655,742...198,658,583
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
PMID:14762206
MGI:1857221|MGI:94909|MGI:97252 (MGI:2180395|PMID:12037571), (MGI:3027696|PMID:14762206), (MGI:3586427|PMID:12895031), (MGI:3849775|PMID:19531352), (MGI:64468|PMID:8269513)
RGD PMID:8269513 PMID:12037571 PMID:12895031 PMID:14762206 PMID:19531352, PMID:14762206 MGI:2180395 MGI:3027696 MGI:3586427 MGI:3849775 MGI:64468, RGD:8554476 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) RGD PMID:14762206 MGI:3027696 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Myoz1 myozenin 1 involved_in ISO (MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:3831256 NCBI chr15:4,077,066...4,084,306
Ensembl chr15:4,077,091...4,084,314
JBrowse link
G Myoz2 myozenin 2 involved_in ISO (MGI:3513659|PMID:15543153) RGD PMID:15543153 MGI:3513659 NCBI chr 2:227,180,887...227,207,629
Ensembl chr 2:227,180,886...227,207,635
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEP RGD PMID:9839950 RGD:5688344 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 IEP RGD PMID:12213446 RGD:2302390 NCBI chr 1:266,953,006...267,038,879
Ensembl chr 1:266,952,561...267,038,883
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
Ensembl
RGD
PMID:7926784 GO_REF:0000107 MGI:66069 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA
ISO
GO_REF:0000107
(MGI:3849657|PMID:19470472)
Ensembl
RGD
PMID:19470472 GO_REF:0000107 MGI:3849657 NCBI chr 1:88,922,346...88,950,560
Ensembl chr 1:88,922,433...88,950,559
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:2385933|MGI:3579117|MGI:3579118 (MGI:3525754|PMID:15572686), (MGI:3609470|PMID:16251273) RGD PMID:15572686 PMID:16251273 MGI:3525754 MGI:3609470 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831 (MGI:1889987|PMID:11030621) RGD PMID:11030621 MGI:1889987 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Pdlim3 PDZ and LIM domain 3 NOT|acts_upstream_of_or_within ISO MGI:2385940 (MGI:1930426|PMID:11238905) RGD PMID:11238905 MGI:1930426 NCBI chr16:49,543,140...49,574,362
Ensembl chr16:49,543,142...49,574,390
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857880 (MGI:1347482|PMID:10572050) RGD PMID:10572050 MGI:1347482 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Plec plectin involved_in ISO MGI:2181791 (MGI:1350765|PMID:9389647) RGD PMID:9389647 MGI:1350765 NCBI chr 7:117,230,319...117,291,859
Ensembl chr 7:117,230,319...117,289,961
JBrowse link
G Popdc2 popeye domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:64,915,041...64,954,704
Ensembl chr11:64,936,692...64,952,687
JBrowse link
G Popdc3 popeye domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:50,394,617...50,422,551
Ensembl chr20:50,394,650...50,422,560
JBrowse link
G Rcan1 regulator of calcineurin 1 IEP RGD PMID:15219871 RGD:1304341 NCBI chr11:32,539,689...32,620,274
Ensembl chr11:32,539,683...32,550,539
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:2175934|PMID:11877460) RGD PMID:11877460 MGI:2175934 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rxrg retinoid X receptor gamma IEP RGD PMID:9389449 RGD:633976 NCBI chr13:85,818,473...85,868,555
Ensembl chr13:85,818,427...85,868,552
JBrowse link
G Sgce sarcoglycan, epsilon IEP RGD PMID:14625080 RGD:1303966 NCBI chr 4:29,726,140...29,769,902
Ensembl chr 4:29,726,146...29,778,039
JBrowse link
G Sin3b SIN3 transcription regulator family member B involved_in ISO (MGI:3687784|PMID:10620510) RGD PMID:10620510 MGI:3687784 NCBI chr16:18,842,456...18,860,086
Ensembl chr16:18,842,456...18,860,086
JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3715562|PMID:17592144)
MGI:106034 (MGI:3578604|PMID:15788460)
RGD PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within
involved_in
ISO MGI:102780 (MGI:3578604|PMID:15788460)
(MGI:3715562|PMID:17592144)
RGD PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Skil SKI-like proto-oncogene involved_in ISO (PMID:17202138) RGD PMID:17202138 NCBI chr 2:115,862,932...115,891,304
Ensembl chr 2:115,866,701...115,891,097
JBrowse link
G Srpk3 SRSF protein kinase 3 acts_upstream_of_or_within ISO (MGI:3588628|PMID:16140986) RGD PMID:16140986 MGI:3588628 NCBI chr  X:157,008,773...157,014,342
Ensembl chr  X:157,008,824...157,013,443
JBrowse link
G Svil supervillin involved_in ISO (PMID:12711699) RGD PMID:12711699 NCBI chr17:55,230,298...55,425,967
Ensembl chr17:55,230,298...55,346,279
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) RGD PMID:17043667 NCBI chr  X:156,421,006...156,429,461
Ensembl chr  X:156,421,009...156,428,593
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP RGD PMID:16439574 RGD:2302095 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Vamp5 vesicle-associated membrane protein 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1858282|PMID:9725904)
Ensembl
RGD
PMID:9725904 GO_REF:0000107 MGI:1858282 NCBI chr 4:100,231,561...100,232,560
Ensembl chr 4:100,231,561...100,232,559
JBrowse link
G Vgll2 vestigial-like family member 2 acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) RGD PMID:14762206 MGI:3027696 NCBI chr20:33,077,106...33,082,962
Ensembl chr20:33,077,106...33,082,962
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 involved_in ISS
ISO
GO_REF:0000024
(MGI:4418579|PMID:20059953)
UniProt
RGD
PMID:20059953 GO_REF:0000024 MGI:4418579 NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236
JBrowse link
skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit involved_in ISO (PMID:18252226) RGD PMID:18252226 NCBI chr 3:60,445,657...60,460,724
Ensembl chr 3:60,445,666...60,460,724
JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit involved_in ISO (PMID:18252226) RGD PMID:18252226 NCBI chr 9:94,286,550...94,294,968
Ensembl chr 9:94,286,550...94,294,968
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IDA RGD PMID:21235761 RGD:5130936 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5442624|PMID:22940113)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22940113 GO_REF:0000024 GO_REF:0000107 MGI:5442624 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G P2rx5 purinergic receptor P2X 5 TAS RGD PMID:12135987 RGD:729229 NCBI chr10:59,725,438...59,737,126
Ensembl chr10:59,725,398...59,737,126
JBrowse link
ventricular cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr11:88,912,599...88,972,176 JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA
ISO
GO_REF:0000107
(MGI:3040529|PMID:15073151), (MGI:3701380|PMID:17336907)
Ensembl
RGD
PMID:15073151 PMID:17336907 GO_REF:0000107 MGI:3040529 MGI:3701380 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (MGI:3694610|PMID:17029294) RGD PMID:17029294 MGI:3694610 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153818 (MGI:3653131|PMID:16687131) RGD PMID:16687131 MGI:3653131 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (MGI:1195585|PMID:9461216) RGD PMID:9461216 MGI:1195585 NCBI chr 3:147,042,944...147,062,725
Ensembl chr 3:147,042,944...147,062,724
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1347481 (MGI:3701735|PMID:16839542) RGD PMID:16839542 MGI:3701735 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1347466 (MGI:3701735|PMID:16839542) RGD PMID:16839542 MGI:3701735 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
ISO (PMID:18276607)
MGI:2153823 (MGI:1197800|PMID:9500551)
RGD PMID:9500551 PMID:18276607 MGI:1197800 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in ISO UniProtKB:Q02248 (MGI:3829137|PMID:17519333) RGD PMID:17519333 MGI:3829137 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Ly6e lymphocyte antigen 6 family member E acts_upstream_of_or_within ISO MGI:2429638 (MGI:2157257|PMID:11784869) RGD PMID:11784869 MGI:2157257 NCBI chr 7:116,355,426...116,359,862
Ensembl chr 7:116,355,698...116,359,862
JBrowse link
G Mybpc3 myosin binding protein C3 involved_in ISO (PMID:11815426), (PMID:16754800) RGD PMID:11815426 PMID:16754800 NCBI chr 3:79,940,509...79,958,731
Ensembl chr 3:79,940,561...79,958,730
JBrowse link
G Myh6 myosin heavy chain 6 involved_in ISO
IEA
(PMID:11815426), (PMID:15998695)
GO_REF:0000107
RGD
Ensembl
PMID:11815426 PMID:15998695 GO_REF:0000107 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO
IEA
(PMID:15856146), (PMID:16754800)
GO_REF:0000107
RGD
Ensembl
PMID:15856146 PMID:16754800 GO_REF:0000107 NCBI chr15:33,605,769...33,657,761
Ensembl chr15:33,634,422...33,656,089
JBrowse link
G Myl2 myosin light chain 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:8673105)
Ensembl
RGD
PMID:8673105 GO_REF:0000107 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Myl3 myosin light chain 3 involved_in ISO (PMID:16754800), (PMID:8673105) RGD PMID:8673105 PMID:16754800 NCBI chr 8:119,030,852...119,036,996
Ensembl chr 8:119,030,875...119,036,996
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:88,912,163...88,972,213 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 acts_upstream_of_or_within ISO MGI:3830811 (MGI:3829520|PMID:18729827) RGD PMID:18729827 MGI:3829520 NCBI chr 2:29,570,581...29,598,328
Ensembl chr 2:29,570,538...29,598,277
JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:2136274 (MGI:1101382|PMID:9428411) RGD PMID:9428411 MGI:1101382 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO
GO_REF:0000107
(MGI:3836072|PMID:18952608)
Ensembl
RGD
PMID:18952608 GO_REF:0000107 MGI:3836072 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (MGI:67103|PMID:8009224) RGD PMID:8009224 MGI:67103 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577) RGD PMID:12773577 MGI:2663364 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (PMID:15542288) RGD PMID:15542288 NCBI chr16:7,292,207...7,295,238
Ensembl chr16:7,292,096...7,295,465
JBrowse link
G Tnni1 troponin I1, slow skeletal type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387868 (MGI:1333026|PMID:9915769)
Ensembl
RGD
PMID:9915769 GO_REF:0000107 MGI:1333026 NCBI chr13:52,624,856...52,637,297
Ensembl chr13:52,624,878...52,637,297
JBrowse link
G Tnni3 troponin I3, cardiac type involved_in ISO (PMID:11815426), (PMID:16754800) RGD PMID:11815426 PMID:16754800 NCBI chr 1:72,882,806...72,886,490
Ensembl chr 1:72,882,806...72,886,488
JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3693250 (MGI:3611718|PMID:16326803)
(PMID:16754800)
UniProt
RGD
PMID:16326803 PMID:16754800 GO_REF:0000024 MGI:3611718 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
G Tpm1 tropomyosin 1 involved_in ISO
IEA
(PMID:11136687)
GO_REF:0000107
(MGI:3802907|PMID:17556658)
RGD
Ensembl
PMID:11136687 PMID:17556658 GO_REF:0000107 MGI:3802907 NCBI chr 8:72,814,737...72,841,496
Ensembl chr 8:72,814,740...72,842,228
JBrowse link
ventricular compact myocardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (MGI:3040576|PMID:15073157) RGD PMID:15073157 MGI:3040576 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Dsp desmoplakin involved_in ISO (MGI:3723417|PMID:16917092) RGD PMID:16917092 MGI:3723417 NCBI chr17:27,286,811...27,334,453
Ensembl chr17:27,286,796...27,334,379
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5770180|PMID:26822476)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26822476 GO_REF:0000024 GO_REF:0000107 MGI:5770180 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Nog noggin involved_in IEA
ISO
GO_REF:0000107
(MGI:3783944|PMID:17218603)
Ensembl
RGD
PMID:17218603 GO_REF:0000107 MGI:3783944 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3807433|PMID:18368538)
Ensembl
RGD
PMID:18368538 GO_REF:0000107 MGI:3807433 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577), (MGI:3818140|PMID:17704211) RGD PMID:12773577 PMID:17704211 MGI:2663364 MGI:3818140 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
ventricular trabecula myocardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (MGI:2175930|PMID:11854453), (MGI:3040576|PMID:15073157) RGD PMID:11854453 PMID:15073157 MGI:2175930 MGI:3040576 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Ccm2l CCM2 like scaffold protein acts_upstream_of_or_within ISO MGI:1924696 (MGI:5437815|PMID:22898778) RGD PMID:22898778 MGI:5437815 NCBI chr 3:148,541,404...148,557,464
Ensembl chr 3:148,541,909...148,556,744
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:3056036 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Eng endoglin involved_in ISO (MGI:4368063|PMID:19703439) RGD PMID:19703439 MGI:4368063 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:2385159 (MGI:5437815|PMID:22898778) RGD PMID:22898778 MGI:5437815 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Med1 mediator complex subunit 1 involved_in ISO (MGI:2158098|PMID:11724781) RGD PMID:11724781 MGI:2158098 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:3040116|PMID:15109497)
Ensembl
RGD
PMID:15109497 GO_REF:0000107 MGI:3040116 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:3701380|PMID:17336907) RGD PMID:17336907 MGI:3701380 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO
IEA
(PMID:17336907)
GO_REF:0000107
RGD
Ensembl
PMID:17336907 GO_REF:0000107 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3701380|PMID:17336907) RGD PMID:17336907 MGI:3701380 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within ISO MGI:3611069 (MGI:3610695|PMID:16314518) RGD PMID:16314518 MGI:3610695 NCBI chr 5:166,156,033...166,259,069
Ensembl chr 5:166,156,033...166,259,069
JBrowse link
visceral muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myh6 myosin heavy chain 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182704 (MGI:3039200|PMID:11708849)
Ensembl
RGD
PMID:11708849 GO_REF:0000107 MGI:3039200 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19599
    developmental process 6753
      anatomical structure development 6178
        muscle structure development 710
          muscle organ development 352
            branchiomeric skeletal muscle development + 3
            muscle organ morphogenesis + 89
            negative regulation of muscle organ development + 18
            pharyngeal muscle development 0
            positive regulation of muscle organ development + 27
            regulation of muscle organ development + 54
            skeletal muscle organ development + 221
            visceral muscle development + 1
Path 2
Term Annotations click to browse term
  biological_process 19599
    developmental process 6753
      anatomical structure development 6178
        multicellular organism development 5617
          system development 5288
            animal organ development 4053
              muscle organ development 352
                branchiomeric skeletal muscle development + 3
                muscle organ morphogenesis + 89
                negative regulation of muscle organ development + 18
                pharyngeal muscle development 0
                positive regulation of muscle organ development + 27
                regulation of muscle organ development + 54
                skeletal muscle organ development + 221
                visceral muscle development + 1
paths to the root