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ONTOLOGY REPORT - ANNOTATIONS

Term:mesoderm development
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Accession:GO:0007498 term browser browse the term
Definition:The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue.

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mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO (MGI:3695845|PMID:17117439) MGI PMID:17117439 MGI:3695845 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694 		JBrowse link
G Acvr2a activin A receptor type 2A acts_upstream_of_or_within ISO (MGI:1344152|PMID:10452853) MGI PMID:10452853 MGI:1344152 NCBI chrNW_004955440:13,849,926...13,931,374
Ensembl chrNW_004955440:13,849,926...13,931,374 		JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO (MGI:1344152|PMID:10452853) MGI PMID:10452853 MGI:1344152 NCBI chrNW_004955427:25,438,652...25,467,360
Ensembl chrNW_004955427:25,438,652...25,467,360 		JBrowse link
G Ctdnep1 CTD nuclear envelope phosphatase 1 acts_upstream_of_or_within ISO (MGI:5505383|PMID:23469192) MGI PMID:23469192 MGI:5505383 NCBI chrNW_004955467:9,660,088...9,666,878
Ensembl chrNW_004955467:9,660,288...9,666,878 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173 		JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within ISO (MGI:5546318|PMID:23552073) MGI PMID:23552073 MGI:5546318 NCBI chrNW_004955407:37,747,152...37,764,170
Ensembl chrNW_004955407:37,747,000...37,765,237 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (MGI:1888607|PMID:10926768) MGI PMID:10926768 MGI:1888607 NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:1928688|PMID:11124112)
(MGI:2135612|PMID:11493558)		 MGI PMID:11124112 PMID:11493558 MGI:1928688 MGI:2135612 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO (MGI:3763867|PMID:17936261)
(MGI:3611720|PMID:16368929)		 MGI PMID:16368929 PMID:17936261 MGI:3611720 MGI:3763867 NCBI chrNW_004955413:6,493,734...6,516,315 JBrowse link
G Irx3 iroquois homeobox 3 acts_upstream_of_or_within ISO (MGI:1928688|PMID:11124112) MGI PMID:11124112 MGI:1928688 NCBI chrNW_004955433:11,944,890...11,948,372
Ensembl chrNW_004955433:11,944,890...11,948,369 		JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (MGI:1889796|PMID:9247336) MGI PMID:9247336 MGI:1889796 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875 		JBrowse link
G Ovol1 ovo like transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:1312960|PMID:9808631) MGI PMID:9808631 MGI:1312960 NCBI chrNW_004955422:19,524,420...19,528,938
Ensembl chrNW_004955422:19,522,384...19,534,450 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO (MGI:4459579|PMID:20484223) MGI PMID:20484223 MGI:4459579 NCBI chrNW_004955493:2,149,053...2,175,482
Ensembl chrNW_004955493:2,147,862...2,175,781 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (MGI:4367920|PMID:19877281) MGI PMID:19877281 MGI:4367920 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:1306879|PMID:9770493) MGI PMID:9770493 MGI:1306879 NCBI chrNW_004955408:5,435,117...5,460,361
Ensembl chrNW_004955408:5,433,268...5,460,361 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO (MGI:1195384|PMID:9420335) MGI PMID:9420335 MGI:1195384 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:3654743|PMID:16801545) MGI PMID:16801545 MGI:3654743 NCBI chrNW_004955445:8,232,084...8,237,893
Ensembl chrNW_004955445:8,231,924...8,237,996 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:2138050|PMID:11242110) MGI PMID:11242110 MGI:2138050 NCBI chrNW_004955442:18,320,674...18,327,062
Ensembl chrNW_004955442:18,319,762...18,325,337 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (MGI:64493|PMID:8293872) MGI PMID:8293872 MGI:64493 NCBI chrNW_004955439:15,675,680...15,683,542
Ensembl chrNW_004955439:15,676,095...15,683,554 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:2681060|PMID:12890722) MGI PMID:12890722 MGI:2681060 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:64780|PMID:8299937) MGI PMID:8299937 MGI:64780 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (MGI:3617674|PMID:16397896) MGI PMID:16397896 MGI:3617674 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
axial mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:894149|PMID:9230313) MGI PMID:9230313 MGI:894149 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO (MGI:1934970|PMID:11358869) MGI PMID:11358869 MGI:1934970 NCBI chrNW_004955454:3,094,015...3,096,060
Ensembl chrNW_004955454:3,094,033...3,095,512 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (MGI:3640733|PMID:16712836) MGI PMID:16712836 MGI:3640733 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chrNW_004955427:19,188,512...19,206,050
Ensembl chrNW_004955427:19,188,183...19,206,050 		JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within ISO (MGI:5014009|PMID:21529712) MGI PMID:21529712 MGI:5014009 NCBI chrNW_004955553:1,129,607...1,133,896
Ensembl chrNW_004955553:1,129,633...1,133,896 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chrNW_004955404:10,731,987...10,735,599 JBrowse link
G Zic3 Zic family member 3 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
axial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:894149|PMID:9230313) MGI PMID:9230313 MGI:894149 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430 		JBrowse link
G Epha2 EPH receptor A2 acts_upstream_of_or_within ISO (MGI:1934524|PMID:11287184) MGI PMID:11287184 MGI:1934524 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781 		JBrowse link
axial mesoderm morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3714667|PMID:17507402) MGI PMID:17507402 MGI:3714667 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3043490|PMID:14668413) MGI PMID:14668413 MGI:3043490 NCBI chrNW_004955424:2,139,576...2,286,183
Ensembl chrNW_004955424:2,137,865...2,286,181 		JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) MGI PMID:14511481 MGI:2677178 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
cell migration involved in mesendoderm migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:1341493|PMID:10421635) MGI PMID:10421635 MGI:1341493 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (MGI:3055649|PMID:15466485) BHF-UCL PMID:15466485 MGI:3055649 NCBI chrNW_004955415:32,012,637...32,015,965
Ensembl chrNW_004955415:32,012,637...32,015,965 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
digestive tract mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO RGD PMID:9368764 RGD:2306312 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
ectoderm and mesoderm interaction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:1335634|PMID:10227293)
(MGI:1335635|PMID:10227294)		 MGI PMID:10227293 PMID:10227294 MGI:1335634 MGI:1335635 NCBI chrNW_004955420:18,178,639...18,384,786
Ensembl chrNW_004955420:18,176,155...18,384,786 		JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (MGI:3580923|PMID:15677567), (MGI:3807430|PMID:18550854)
(MGI:3838687|PMID:19182774)		 MGI PMID:15677567 PMID:18550854 PMID:19182774 MGI:3580923 MGI:3807430 MGI:3838687 NCBI chrNW_004955464:11,304,611...11,317,420
Ensembl chrNW_004955464:11,310,628...11,315,924 		JBrowse link
intermediate mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 acts_upstream_of_or_within ISO (MGI:3613210|PMID:16223478) MGI PMID:16223478 MGI:3613210 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
intermediate mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:10021330) UniProt PMID:10021330 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
lateral mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chrNW_004955414:28,166,562...28,341,275
Ensembl chrNW_004955414:28,175,543...28,333,856 		JBrowse link
G Tead2 TEA domain transcription factor 2 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chrNW_004955559:1,450,706...1,465,947
Ensembl chrNW_004955559:1,450,706...1,465,947 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408 		JBrowse link
lateral mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:1928688|PMID:11124112) MGI PMID:11124112 MGI:1928688 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO (MGI:5918349|PMID:28893950) MGI PMID:28893950 MGI:5918349 NCBI chrNW_004955414:22,322,954...22,324,412
Ensembl chrNW_004955414:22,323,031...22,324,367 		JBrowse link
mesendoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3051920|PMID:15136140) MGI PMID:15136140 MGI:3051920 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
G Eomes eomesodermin acts_upstream_of ISO (MGI:5697986|PMID:26494787) MGI PMID:26494787 MGI:5697986 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of ISO (MGI:5697986|PMID:26494787) MGI PMID:26494787 MGI:5697986 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255 		JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of ISO (MGI:5697986|PMID:26494787) MGI PMID:26494787 MGI:5697986 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 ISO (PMID:21741376)
(MGI:2677178|PMID:14511481)
(MGI:2155575|PMID:11311163)		 BHF-UCL
MGI		 PMID:11311163 PMID:14511481 PMID:21741376 MGI:2155575 MGI:2677178 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of ISO (MGI:5697986|PMID:26494787) MGI PMID:26494787 MGI:5697986 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of ISO (MGI:5697986|PMID:26494787) MGI PMID:26494787 MGI:5697986 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538 		JBrowse link
G Smim43 small integral membrane protein 43 involved_in ISO (MGI:7313523|PMID:35810171) UniProt PMID:35810171 MGI:7313523 NCBI chrNW_004955428:18,789,746...18,797,027 JBrowse link
G Ssbp3 single stranded DNA binding protein 3 acts_upstream_of ISO (MGI:5697986|PMID:26494787) MGI PMID:26494787 MGI:5697986 NCBI chrNW_004955464:4,901,150...5,049,341
Ensembl chrNW_004955464:4,901,151...5,047,656 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (MGI:5784967|PMID:24733888) UniProt PMID:24733888 MGI:5784967 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617 		JBrowse link
mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO (MGI:1345529|PMID:10479450)
(MGI:3695845|PMID:17117439)		 MGI PMID:10479450 PMID:17117439 MGI:1345529 MGI:3695845 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694 		JBrowse link
G Ahdc1 AT-hook DNA binding motif containing 1 involved_in ISO (PMID:35585237)
(MGI:7294317|PMID:35585237)		 UniProt PMID:35585237 MGI:7294317 NCBI chrNW_004955452:6,767,250...6,832,989
Ensembl chrNW_004955452:6,767,266...6,832,868 		JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO (MGI:5913685|PMID:28911199) MGI PMID:28911199 MGI:5913685 NCBI chrNW_004955493:8,295,868...8,302,638
Ensembl chrNW_004955493:8,295,868...8,304,520 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699), (MGI:70235|PMID:7799920) MGI PMID:7799920 PMID:18462699 MGI:4415813 MGI:70235 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:3578079|PMID:15843411) MGI PMID:15843411 MGI:3578079 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3722226|PMID:17699604) MGI PMID:17699604 MGI:3722226 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within ISO (MGI:1855789|PMID:10772805) MGI PMID:10772805 MGI:1855789 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727 		JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO (MGI:2662951|PMID:12810603) MGI PMID:12810603 MGI:2662951 NCBI chrNW_004955420:23,111,690...23,120,038
Ensembl chrNW_004955420:23,112,093...23,120,036 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5296388|PMID:22072575), (MGI:5823085|PMID:27870829) UniProt PMID:22072575 PMID:27870829 MGI:5296388 MGI:5823085 NCBI chrNW_004955419:4,604,883...4,626,675
Ensembl chrNW_004955419:4,607,507...4,626,608 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699) MGI PMID:18462699 MGI:4415813 NCBI chrNW_004955425:7,353,964...7,357,599 JBrowse link
G Ecsit ECSIT signaling integrator acts_upstream_of_or_within ISO (MGI:2682456|PMID:14633973) MGI PMID:14633973 MGI:2682456 NCBI chrNW_004955495:2,375,992...2,385,962
Ensembl chrNW_004955495:2,375,602...2,382,035 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO (MGI:1354065|PMID:10716450) MGI PMID:10716450 MGI:1354065 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867 		JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699) MGI PMID:18462699 MGI:4415813 NCBI chrNW_004955468:4,857,023...4,859,926
Ensembl chrNW_004955468:4,857,595...4,860,531 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO (MGI:3608483|PMID:16236767) MGI PMID:16236767 MGI:3608483 NCBI chrNW_004955422:3,303,948...3,438,381
Ensembl chrNW_004955422:3,304,842...3,447,908 		JBrowse link
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO (MGI:84014|PMID:8922529) MGI PMID:8922529 MGI:84014 NCBI chrNW_004955468:3,980,999...4,007,553
Ensembl chrNW_004955468:3,980,999...4,008,652 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (MGI:1197801|PMID:9500550) MGI PMID:9500550 MGI:1197801 NCBI chrNW_004955408:8,848,723...8,851,804
Ensembl chrNW_004955408:8,848,559...8,851,994 		JBrowse link
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (MGI:70235|PMID:7799920) MGI PMID:7799920 MGI:70235 NCBI chrNW_004955460:2,054,879...2,066,628
Ensembl chrNW_004955460:2,046,588...2,066,609 		JBrowse link
G Macf1 microtubule actin crosslinking factor 1 acts_upstream_of_or_within ISO (MGI:3640889|PMID:16815997) MGI PMID:16815997 MGI:3640889 NCBI chrNW_004955452:16,684,784...17,025,940
Ensembl chrNW_004955452:16,798,911...17,024,732 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (MGI:707944|PMID:9171370) MGI PMID:9171370 MGI:707944 NCBI chrNW_004955455:3,862,804...3,950,669
Ensembl chrNW_004955455:3,862,347...3,951,891 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2155575|PMID:11311163) MGI PMID:11311163 MGI:2155575 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699) MGI PMID:18462699 MGI:4415813 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (MGI:3042044|PMID:13129926) MGI PMID:13129926 MGI:3042044 NCBI chrNW_004955419:25,779,368...25,817,445
Ensembl chrNW_004955419:25,779,178...25,818,706 		JBrowse link
G Pofut2 protein O-fucosyltransferase 2 acts_upstream_of_or_within ISO (MGI:4838381|PMID:20637190) MGI PMID:20637190 MGI:4838381 NCBI chrNW_004955407:41,972,833...41,984,095
Ensembl chrNW_004955407:41,972,717...41,984,095 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:2183097|PMID:12004056) MGI PMID:12004056 MGI:2183097 NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930 		JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within ISO (MGI:2183097|PMID:12004056) MGI PMID:12004056 MGI:2183097 NCBI chrNW_004955478:4,241,283...4,262,119
Ensembl chrNW_004955478:4,241,283...4,263,087 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chrNW_004955454:2,886,981...2,888,829
Ensembl chrNW_004955454:2,886,981...2,888,829 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (MGI:3039049|PMID:15084457) MGI PMID:15084457 MGI:3039049 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (MGI:3039049|PMID:15084457) MGI PMID:15084457 MGI:3039049 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (MGI:2153695|PMID:11689706) UniProt PMID:11689706 MGI:2153695 NCBI chrNW_004955445:8,232,084...8,237,893
Ensembl chrNW_004955445:8,231,924...8,237,996 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (MGI:1312998|PMID:9799237), (MGI:1927031|PMID:11060034) MGI PMID:9799237 PMID:11060034 MGI:1312998 MGI:1927031 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804)
(MGI:2447720|PMID:9490412)		 MGI PMID:9490412 PMID:15755804 MGI:2447720 MGI:3577662 NCBI chrNW_004955493:6,888,832...6,894,840
Ensembl chrNW_004955493:6,888,832...6,894,831 		JBrowse link
G Tlx2 T cell leukemia homeobox 2 acts_upstream_of_or_within ISO (MGI:1267265|PMID:9550720) MGI PMID:9550720 MGI:1267265 NCBI chrNW_004955424:11,269,426...11,275,200
Ensembl chrNW_004955424:11,269,426...11,275,200 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within ISO (MGI:3578079|PMID:15843411) MGI PMID:15843411 MGI:3578079 NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117 		JBrowse link
G Txnrd1 thioredoxin reductase 1 acts_upstream_of_or_within ISO (MGI:3721365|PMID:17697936) MGI PMID:17697936 MGI:3721365 NCBI chrNW_004955405:38,863,762...38,928,615
Ensembl chrNW_004955405:38,903,918...38,927,410 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (MGI:4397730|PMID:19841259) UniProt PMID:19841259 MGI:4397730 NCBI chrNW_004955423:23,374,401...23,465,308
Ensembl chrNW_004955423:23,374,401...23,466,475 		JBrowse link
mesoderm migration involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (MGI:71468|PMID:7720590) MGI PMID:7720590 MGI:71468 NCBI chrNW_004955439:15,675,680...15,683,542
Ensembl chrNW_004955439:15,676,095...15,683,554 		JBrowse link
mesoderm morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO (MGI:4431136|PMID:20133625) MGI PMID:20133625 MGI:4431136 NCBI chrNW_004955420:25,070,626...25,178,410
Ensembl chrNW_004955420:25,090,798...25,177,760 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (PMID:9207801) UniProt PMID:9207801 NCBI chrNW_004955455:15,988,153...16,000,156
Ensembl chrNW_004955455:15,988,663...16,000,063 		JBrowse link
mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (MGI:70235|PMID:7799920) MGI PMID:7799920 MGI:70235 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:7803853 RGD:632663 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:3766861|PMID:17881493) MGI PMID:17881493 MGI:3766861 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:17624332) UniProt PMID:17624332 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (MGI:70235|PMID:7799920) MGI PMID:7799920 MGI:70235 NCBI chrNW_004955460:2,054,879...2,066,628
Ensembl chrNW_004955460:2,046,588...2,066,609 		JBrowse link
G Itga2 integrin subunit alpha 2 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004955446:14,309,516...14,421,991
Ensembl chrNW_004955446:14,309,349...14,422,170 		JBrowse link
G Itga3 integrin subunit alpha 3 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004955451:11,563,120...11,590,119
Ensembl chrNW_004955451:11,561,704...11,589,727 		JBrowse link
G Itga8 integrin subunit alpha 8 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004955429:11,932,764...12,120,757
Ensembl chrNW_004955429:11,932,570...12,120,821 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004955478:9,788,192...9,830,254
Ensembl chrNW_004955478:9,788,149...9,823,746 		JBrowse link
G Itgb4 integrin subunit beta 4 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chrNW_004955506:6,493,466...6,526,778
Ensembl chrNW_004955506:6,493,466...6,526,778 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO (MGI:5448135|PMID:22949634) MGI PMID:22949634 MGI:5448135 NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832 		JBrowse link
G Kdm6b lysine demethylase 6B involved_in ISO (MGI:5574281|PMID:23856522) BHF-UCL PMID:23856522 MGI:5574281 NCBI chrNW_004955467:9,085,239...9,106,658
Ensembl chrNW_004955467:9,086,204...9,094,404 		JBrowse link
mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanog Nanog homeobox acts_upstream_of_or_within ISO (MGI:3654744|PMID:16801560) MGI PMID:16801560 MGI:3654744 NCBI chrNW_004955413:6,561,323...6,565,770 JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (MGI:1355046|PMID:10742100) MGI PMID:10742100 MGI:1355046 NCBI chrNW_004955583:995,707...1,003,202 JBrowse link
G Smad1 SMAD family member 1 acts_upstream_of_or_within ISO (MGI:3654744|PMID:16801560) MGI PMID:16801560 MGI:3654744 NCBI chrNW_004955428:1,357,398...1,429,521
Ensembl chrNW_004955428:1,361,085...1,429,948 		JBrowse link
mesodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (MGI:76261|PMID:7657163) MGI PMID:7657163 MGI:76261 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (MGI:3768605|PMID:17785448) UniProt PMID:17785448 MGI:3768605 NCBI chrNW_004955444:8,336,071...8,655,041
Ensembl chrNW_004955444:8,495,530...8,655,100 		JBrowse link
G Hoxa11 homeobox A11 involved_in ISO (MGI:3768605|PMID:17785448) UniProt PMID:17785448 MGI:3768605 NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465 		JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:3768605|PMID:17785448) UniProt PMID:17785448 MGI:3768605 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of ISO (MGI:3711603|PMID:17462603) MGI PMID:17462603 MGI:3711603 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3768605|PMID:17785448) UniProt PMID:17785448 MGI:3768605 NCBI chrNW_004955441:12,029,530...12,033,214
Ensembl chrNW_004955441:12,029,480...12,033,214 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO (MGI:2447720|PMID:9490412) MGI PMID:9490412 MGI:2447720 NCBI chrNW_004955493:6,888,832...6,894,840
Ensembl chrNW_004955493:6,888,832...6,894,831 		JBrowse link
negative regulation of mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:9660951)
(MGI:1858315|PMID:10748465)		 BHF-UCL PMID:9660951 PMID:10748465 MGI:1858315 NCBI chrNW_004955434:17,738,281...17,740,823
Ensembl chrNW_004955434:17,734,495...17,740,823 		JBrowse link
G Rps6ka6 ribosomal protein S6 kinase A6 involved_in ISO (MGI:3041939|PMID:15121846) UniProt PMID:15121846 MGI:3041939 NCBI chrNW_004955529:3,115,652...3,296,505
Ensembl chrNW_004955529:3,149,407...3,296,105 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO (MGI:4946171|PMID:21062744) BHF-UCL PMID:21062744 MGI:4946171 NCBI chrNW_004955433:9,146,074...9,161,171
Ensembl chrNW_004955433:9,144,748...9,161,171 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:5433834|PMID:21127502) MGI PMID:21127502 MGI:5433834 NCBI chrNW_004955420:18,178,639...18,384,786
Ensembl chrNW_004955420:18,176,155...18,384,786 		JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:20559569) BHF-UCL PMID:20559569 NCBI chrNW_004955425:7,353,964...7,357,599 JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3711603|PMID:17462603) MGI PMID:17462603 MGI:3711603 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321 		JBrowse link
paraxial mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 acts_upstream_of_or_within ISO (MGI:3620337|PMID:15170697) MGI PMID:15170697 MGI:3620337 NCBI chrNW_004955468:70,714...78,831
Ensembl chrNW_004955468:71,004...78,827 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chrNW_004955403:14,476,689...14,554,380
Ensembl chrNW_004955403:14,480,162...14,554,702 		JBrowse link
G Nup133 nucleoporin 133 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chrNW_004955492:8,583,902...8,641,891
Ensembl chrNW_004955492:8,583,869...8,643,433 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 acts_upstream_of_or_within ISO (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) MGI PMID:9636176 PMID:15755804 MGI:1267118 MGI:3577662 NCBI chrNW_004955427:19,188,512...19,206,050
Ensembl chrNW_004955427:19,188,183...19,206,050 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO (MGI:84545|PMID:8955271) MGI PMID:8955271 MGI:84545 NCBI chrNW_004955597:446,489...452,003
Ensembl chrNW_004955597:446,855...451,949 		JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chrNW_004955414:28,166,562...28,341,275
Ensembl chrNW_004955414:28,175,543...28,333,856 		JBrowse link
G Tead2 TEA domain transcription factor 2 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chrNW_004955559:1,450,706...1,465,947
Ensembl chrNW_004955559:1,450,706...1,465,947 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chrNW_004955404:10,731,987...10,735,599 JBrowse link
G Zic3 Zic family member 3 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892 		JBrowse link
paraxial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 acts_upstream_of_or_within ISO (MGI:1195048|PMID:9441674) MGI PMID:9441674 MGI:1195048 NCBI chrNW_004955410:33,937,825...34,672,790
Ensembl chrNW_004955410:33,935,320...34,673,764 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (MGI:1334099|PMID:10090727) MGI PMID:10090727 MGI:1334099 NCBI chrNW_004955455:10,694,102...10,717,613
Ensembl chrNW_004955455:10,694,102...10,717,613 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (MGI:3609520|PMID:16109169) MGI PMID:16109169 MGI:3609520 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (MGI:1334099|PMID:10090727) MGI PMID:10090727 MGI:1334099 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO (MGI:5634837|PMID:25813538) MGI PMID:25813538 MGI:5634837 NCBI chrNW_004955414:15,674,478...15,694,758
Ensembl chrNW_004955414:15,674,940...15,694,883 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:5634837|PMID:25813538) MGI PMID:25813538 MGI:5634837 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684 		JBrowse link
paraxial mesoderm morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chrNW_004955403:14,476,689...14,554,380
Ensembl chrNW_004955403:14,480,162...14,554,702 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (MGI:3039049|PMID:15084457) MGI PMID:15084457 MGI:3039049 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (MGI:3039049|PMID:15084457) MGI PMID:15084457 MGI:3039049 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136 		JBrowse link
paraxial mesoderm structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:86727|PMID:9126297) MGI PMID:9126297 MGI:86727 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
positive regulation of mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699) MGI PMID:18462699 MGI:4415813 NCBI chrNW_004955468:4,857,023...4,859,926
Ensembl chrNW_004955468:4,857,595...4,860,531 		JBrowse link
G Mixl1 Mix paired-like homeobox acts_upstream_of_or_within
involved_in		 ISO (MGI:3773385|PMID:16403910)
(MGI:5448529|PMID:19711456)		 MGI
BHF-UCL		 PMID:16403910 PMID:19711456 MGI:3773385 MGI:5448529 NCBI chrNW_004955489:418,650...422,428 JBrowse link
positive regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein alpha 1 involved_in ISO (PMID:30599359) ARUK-UCL PMID:30599359 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095 		JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A involved_in ISO (PMID:20559569) BHF-UCL PMID:20559569 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541 		JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
regulation of mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pus7 pseudouridine synthase 7 involved_in ISO (PMID:29628141) UniProt PMID:29628141 NCBI chrNW_004955410:10,062,768...10,119,751
Ensembl chrNW_004955410:10,060,071...10,119,757 		JBrowse link
regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (MGI:3766861|PMID:17881493) MGI PMID:17881493 MGI:3766861 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12228
    developmental process 5792
      anatomical structure development 5478
        tissue development 1962
          mesoderm development 116
            axial mesoderm development + 11
            digestive tract mesoderm development 1
            ectoderm and mesoderm interaction 1
            gonadal mesoderm development 0
            intermediate mesoderm development + 2
            lateral mesoderm development + 10
            mesectoderm development 0
            mesendoderm development + 11
            mesoderm morphogenesis + 73
            negative regulation of mesoderm development + 4
            paraxial mesoderm development + 22
            positive regulation of mesoderm development + 2
            regulation of mesoderm development + 7
paths to the root