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ONTOLOGY REPORT - ANNOTATIONS


Term:midgut development
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Accession:GO:0007494 term browser browse the term
Definition:The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine.


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midgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:15964596 RGD:1643113 NCBI chr 9:72,900,671...72,953,053
Ensembl chr 9:72,900,671...73,080,442
JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in IEA
ISO
Ensembl
RGD
PMID:15964596 GO_REF:0000107 RGD:1643113 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:10050048 RGD:4144052 NCBI chr14:67,619,920...67,651,708
Ensembl chr14:67,619,920...67,651,708
JBrowse link
G ASL argininosuccinate lyase ISO RGD PMID:9544996 RGD:4139911 NCBI chr 7:66,075,819...66,093,576
Ensembl chr 7:66,075,800...66,094,697
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA
ISO
Ensembl
RGD
PMID:9544996 GO_REF:0000107 RGD:4139911 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274
JBrowse link
G CASP1 caspase 1 ISO RGD PMID:12396474 RGD:5130192 NCBI chr11:105,025,443...105,035,591
Ensembl chr11:105,025,443...105,035,250
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA
ISO
Ensembl
RGD
PMID:9544996 GO_REF:0000107 RGD:4139911 NCBI chr 2:210,477,685...210,679,107
Ensembl chr 2:210,477,682...210,679,107
JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:17356920 RGD:2289844 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G DAB1 DAB adaptor protein 1 involved_in IEA
ISO
Ensembl
RGD
PMID:19946030 GO_REF:0000107 RGD:2317766 NCBI chr 1:56,994,778...58,546,726
Ensembl chr 1:56,994,778...58,546,734
JBrowse link
G EGFR epidermal growth factor receptor involved_in IEA
ISO
Ensembl
RGD
PMID:7926492 GO_REF:0000107 RGD:10395256 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G FOXF1 forkhead box F1 involved_in IMP (PMID:19500772) DFLAT PMID:19500772 NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:8620869 RGD:2326125 NCBI chr 1:119,747,996...119,768,932
Ensembl chr 1:119,748,002...119,768,905
JBrowse link
G OTC ornithine transcarbamylase involved_in IEA
ISO
Ensembl
RGD
PMID:9544996 GO_REF:0000107 RGD:4139911 NCBI chr  X:38,352,528...38,421,446
Ensembl chr  X:38,352,586...38,421,446
JBrowse link
G REG1A regenerating family member 1 alpha involved_in IEA
ISO
Ensembl
RGD
PMID:7720628 GO_REF:0000107 RGD:9850133 NCBI chr 2:79,120,488...79,123,409
Ensembl chr 2:79,120,362...79,123,409
JBrowse link
G REG3A regenerating family member 3 alpha ISO RGD PMID:7720628 RGD:9850133 NCBI chr 2:79,157,006...79,159,753
Ensembl chr 2:79,157,003...79,159,753
JBrowse link
G RELN reelin ISO RGD PMID:19946030 RGD:2317766 NCBI chr 7:103,471,789...103,989,658
Ensembl chr 7:103,471,381...103,989,658
JBrowse link
G RXRA retinoid X receptor alpha ISO RGD PMID:15964596 RGD:1643113 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833777|PMID:19100728) Ensembl
MGI
PMID:19100728 GO_REF:0000107 MGI:3833777 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
posterior midgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRB endothelin receptor type B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:77408|PMID:8582288) Ensembl
MGI
PMID:8582288 GO_REF:0000107 MGI:77408 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
G RET ret proto-oncogene involved_in TAS (PMID:8114939) PINC PMID:8114939 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351
JBrowse link
visceral mesoderm-endoderm interaction involved in midgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXL1 forkhead box L1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:893314|PMID:9203584) UniProt
MGI
PMID:9203584 GO_REF:0000024 MGI:893314 NCBI chr16:86,578,549...86,583,478
Ensembl chr16:86,576,368...86,583,478
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18537
    multicellular organismal process 8421
      multicellular organism development 5918
        tube development 1284
          digestive tract development 171
            midgut development 22
              anterior midgut development 0
              posterior midgut development 2
              visceral mesoderm-endoderm interaction involved in midgut development 1
Path 2
Term Annotations click to browse term
  biological_process 18537
    developmental process 7222
      anatomical structure development 6546
        multicellular organism development 5918
          system development 5591
            digestive system development 186
              digestive tract development 171
                midgut development 22
                  anterior midgut development 0
                  posterior midgut development 2
                  visceral mesoderm-endoderm interaction involved in midgut development 1
paths to the root