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ONTOLOGY REPORT - ANNOTATIONS


Term:sensory organ development
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Accession:GO:0007423 term browser browse the term
Definition:The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure.
Synonyms:exact_synonym: sense organ development


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sensory organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO MGI:1928295 (MGI:79108|PMID:8789948) RGD PMID:8789948 MGI:79108 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Myo7a myosin VIIA IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Myo7b myosin VIIb IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:24,742,329...24,823,889
Ensembl chr18:24,742,329...24,823,858
JBrowse link
G Sox3 SRY-box transcription factor 3 ISO (MGI:3765357|PMID:17728342) RGD PMID:17728342 MGI:3765357 NCBI chr  X:144,035,162...144,037,364
Ensembl chr  X:144,035,883...144,037,294
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (PMID:7555706) RGD PMID:7555706 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tfap2b transcription factor AP-2 beta ISO (PMID:7555706) RGD PMID:7555706 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 ISO (MGI:3054139|PMID:15363391) RGD PMID:15363391 MGI:3054139 NCBI chr12:48,101,012...48,121,281
Ensembl chr12:48,101,673...48,121,270
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr14:91,782,281...91,867,828
Ensembl chr14:91,782,354...91,867,424
JBrowse link
G Miat myocardial infarction associated transcript ISO (MGI:4458994|PMID:20459797) RGD PMID:20459797 MGI:4458994 NCBI chr12:50,447,251...50,461,859 JBrowse link
G Neurod1 neuronal differentiation 1 ISS
ISO
GO_REF:0000024
(MGI:2158684|PMID:11861467)
UniProt
RGD
PMID:11861467 GO_REF:0000024 MGI:2158684 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod4 neuronal differentiation 4 ISO (MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:2158684 NCBI chr 7:9,699,964...9,712,067
Ensembl chr 7:9,699,961...9,711,928
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISS
ISO
GO_REF:0000024
(MGI:3691257|PMID:17075007)
UniProt
RGD
PMID:17075007 GO_REF:0000024 MGI:3691257 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477
JBrowse link
G Rorb RAR-related orphan receptor B ISS
ISO
GO_REF:0000024
(MGI:5546314|PMID:23652001)
UniProt
RGD
PMID:23652001 GO_REF:0000024 MGI:5546314 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839
JBrowse link
anterior semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 ISO MGI:1856276 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase ISO MGI:2671810 (MGI:5568671|PMID:24303013) RGD PMID:24303013 MGI:5568671 NCBI chr 7:131,330,913...131,336,183
Ensembl chr 7:131,330,913...131,336,183
JBrowse link
G Clrn1 clarin 1 ISO MGI:3850171 (MGI:3849925|PMID:19414487) RGD PMID:19414487 MGI:3849925 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO MGI:3574787 (MGI:3527944|PMID:15630379) RGD PMID:15630379 MGI:3527944 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing ISO (MGI:3799635|PMID:18794526) RGD PMID:18794526 MGI:3799635 NCBI chr 1:166,985,468...166,989,681
Ensembl chr 1:166,986,013...166,988,062
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO MGI:4433578 (MGI:5565635|PMID:24334608) RGD PMID:24334608 MGI:5565635 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO
IBA
MGI:2682641 (MGI:2680888|PMID:12808454)
PMID:21873635
RGD PMID:12808454, PMID:21873635 MGI:2680888, RGD:13792537 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
JBrowse link
G Tmc1 transmembrane channel-like 1 ISO MGI:5427097 (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 1:238,336,919...238,525,792
Ensembl chr 1:238,336,919...238,441,500
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Jag2 jagged canonical Notch ligand 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:1332721|PMID:10080181)
Ensembl
RGD
PMID:10080181, PMID:10080181 GO_REF:0000107 MGI:1332721, RGD:8553713 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Notch1 notch receptor 1 ISO MGI:3044585|MGI:3046196 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:3046196|MGI:3583755 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:3611666|PMID:16407553) RGD PMID:16407553 MGI:3611666 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:2155983 (MGI:1339217|PMID:10364557) RGD PMID:10364557 MGI:1339217 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 ISO MGI:4354110 (MGI:4353582|PMID:19363478) RGD PMID:19363478 MGI:4353582 NCBI chr 4:57,463,366...57,463,471
Ensembl chr 4:57,463,366...57,463,471
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Scrib scribble planar cell polarity protein ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector IEA
ISO
GO_REF:0000107
MGI:5558098 (MGI:5544506|PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Cdh23 cadherin-related 23 ISO
IEA
MGI:1856228|MGI:1856681|MGI:1891428|MGI:2154548|MGI:2154549 (MGI:1929001|PMID:11138008), (MGI:1933915|PMID:11322776), (MGI:3526751|PMID:15537665), (MGI:3625226|PMID:12121736), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710), (MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
GO_REF:0000107
RGD
Ensembl
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 PMID:12121736 PMID:15537665 PMID:17050716 PMID:23217710 GO_REF:0000107 MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Clic5 chloride intracellular channel 5 ISO
IBA
MGI:3663254 (MGI:3663248|PMID:17021174)
PMID:21873635
RGD PMID:17021174, PMID:21873635 MGI:3663248, RGD:13792537 NCBI chr 9:19,121,676...19,372,673
Ensembl chr 9:19,121,677...19,372,673
JBrowse link
G Clrn1 clarin 1 IEA
ISO
GO_REF:0000107
MGI:3850171 (MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712)
Ensembl
RGD
PMID:19414487 PMID:19423712 GO_REF:0000107 MGI:3849925 MGI:4353469 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO MGI:2139535|MGI:6281113|MGI:6281114 (MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:6278501 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO MGI:3055797|MGI:3718054 (MGI:3578102|PMID:15905332), (MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710) RGD PMID:15905332 PMID:17876667 PMID:23217710 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Myo3a myosin IIIA ISO MGI:2448580 (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO MGI:2183924 (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Myo7a myosin VIIA ISO MGI:1860092|MGI:2155422 (MGI:2156358|PMID:11753415), (MGI:3625226|PMID:12121736), (MGI:3686545|PMID:17050716) RGD PMID:11753415 PMID:12121736 PMID:17050716 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:1855958|MGI:1856394|MGI:1856396|MGI:1890219|MGI:2151877|MGI:3505691 (MGI:1928787|PMID:10978835), (MGI:3526751|PMID:15537665), (MGI:3619110|PMID:11124469), (MGI:3654702|PMID:16887306), (MGI:5468200|PMID:23217710) RGD PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO
IBA
MGI:4433578 (MGI:5565635|PMID:24334608)
PMID:21873635
RGD PMID:24334608, PMID:21873635 MGI:5565635, RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pls1 plastin 1 IEA
ISO
GO_REF:0000107
(MGI:5608770|PMID:25124451)
Ensembl
RGD
PMID:25124451 GO_REF:0000107 MGI:5608770 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Scrib scribble planar cell polarity protein ISO MGI:2139764 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:2145950|MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO MGI:3526430 (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Sod1 superoxide dismutase 1 ISS
ISO
GO_REF:0000024
MGI:1857872 (MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373)
UniProt
RGD
PMID:10464373 PMID:10466888 GO_REF:0000024 MGI:1344578 MGI:3700629 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Strc stereocilin ISO MGI:3818633 (MGI:3818235|PMID:18849963), (MGI:5430850|PMID:21165971) RGD PMID:18849963 PMID:21165971 MGI:3818235 MGI:5430850 NCBI chr 3:113,324,403...113,343,513
Ensembl chr 3:113,324,698...113,342,675
JBrowse link
G Tprn taperin ISO MGI:2685697 (MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:6278501 NCBI chr 3:2,480,232...2,487,710
Ensembl chr 3:2,480,232...2,487,710
JBrowse link
G Triobp TRIO and F-actin binding protein ISO MGI:4881773 (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420
JBrowse link
G Whrn whirlin IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:4432119 (MGI:5796227|PMID:27117407)
Ensembl
RGD
PMID:27117407, PMID:21873635 GO_REF:0000107 MGI:5796227, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link
camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 ISO MGI:3526871 (MGI:3525751|PMID:15572692) RGD PMID:15572692 MGI:3525751 NCBI chr 9:67,234,612...67,284,504
Ensembl chr 9:67,234,303...67,282,600
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:1889403 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:1857891|MGI:2180721 (MGI:3055706|PMID:15366004), (MGI:3612223|PMID:16368932) RGD PMID:15366004 PMID:16368932 MGI:3055706 MGI:3612223 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 IEA
ISO
GO_REF:0000107
MGI:2448591 (MGI:1926242|PMID:11044403)
Ensembl
RGD
PMID:11044403 GO_REF:0000107 MGI:1926242 NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374
JBrowse link
G B9d1 B9 domain containing 1 ISO MGI:5301332 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr10:47,784,294...47,794,399
Ensembl chr10:47,785,033...47,792,590
Ensembl chr10:47,785,033...47,792,590
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:1857137|MGI:2137520 (MGI:1095762|PMID:9268572), (MGI:3043486|PMID:14681194) RGD PMID:9268572 PMID:14681194 MGI:1095762 MGI:3043486 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO MGI:1338938 (MGI:3574003|PMID:15673568) RGD PMID:15673568 MGI:3574003 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO (PMID:15454078) RGD PMID:15454078 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A ISO MGI:5708063 (MGI:5696765|PMID:24947469) RGD PMID:24947469 MGI:5696765 NCBI chr14:71,895,128...71,979,452
Ensembl chr14:71,895,246...71,973,419
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C ISO MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) RGD PMID:19276117 MGI:3839493 NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:3588650 (MGI:3611161|PMID:16207732) RGD PMID:16207732 MGI:3611161 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Cryaa crystallin, alpha A ISO MGI:1916503 (MGI:2682441|PMID:12546709) RGD PMID:12546709 MGI:2682441 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187
JBrowse link
G Cryab crystallin, alpha B ISO MGI:88515 (MGI:2682441|PMID:12546709) RGD PMID:12546709 MGI:2682441 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545
JBrowse link
G Cryba1 crystallin, beta A1 ISO MGI:1857969 (MGI:1350675|PMID:10585769) RGD PMID:10585769 MGI:1350675 NCBI chr10:65,160,777...65,167,504
Ensembl chr10:65,161,152...65,167,494
JBrowse link
G Cryba4 crystallin, beta A4 ISO (PMID:16960806) RGD PMID:16960806 NCBI chr12:50,407,843...50,414,434
Ensembl chr12:50,407,843...50,414,432
JBrowse link
G Crybb2 crystallin, beta B2 IEP
ISO
MGI:2137511 (MGI:2137502|PMID:11381063) RGD PMID:11381063, PMID:8706714 MGI:2137502, RGD:1298813 NCBI chr12:49,577,580...49,588,555
Ensembl chr12:49,578,633...49,588,555
JBrowse link
G Crygc crystallin, gamma C ISO MGI:2176919 (MGI:2156903|PMID:11773036) RGD PMID:11773036 MGI:2156903 NCBI chr 9:71,786,246...71,788,281
Ensembl chr 9:71,786,248...71,788,281
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:15967433 RGD:2306661 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 IEA
ISO
GO_REF:0000107
(PMID:25406291)
Ensembl
RGD
PMID:25406291 GO_REF:0000107 NCBI chr14:113,202,382...113,294,993
Ensembl chr14:113,202,419...113,295,014
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921
JBrowse link
G Fbn1 fibrillin 1 ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fbn2 fibrillin 2 ISO (PMID:25406291) RGD PMID:25406291 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO MGI:3042750 (MGI:3039989|PMID:15105374) RGD PMID:15105374 MGI:3039989 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1856705|MGI:1857869 (MGI:1340945|PMID:10395790), (MGI:1355577|PMID:10767326) RGD PMID:10395790 PMID:10767326 MGI:1340945 MGI:1355577 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857865 (MGI:1355577|PMID:10767326) RGD PMID:10767326 MGI:1355577 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Foxe3 forkhead box E3 ISO MGI:2387330 (MGI:1932584|PMID:11309658) RGD PMID:11309658 MGI:1932584 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656
JBrowse link
G Foxp2 forkhead box P2 ISO MGI:3723630 (MGI:3723373|PMID:17619227) RGD PMID:17619227 MGI:3723373 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:2388397 (MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:3713422 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Gja8 gap junction protein, alpha 8 ISO MGI:2137525|MGI:3052418 (MGI:2156142|PMID:11782410), (MGI:3047041|PMID:15253273) RGD PMID:11782410 PMID:15253273 MGI:2156142 MGI:3047041 NCBI chr 2:199,050,854...199,052,470
Ensembl chr 2:199,050,854...199,052,470
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:98297 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 ISO MGI:1915913 (MGI:4947900|PMID:21296886) RGD PMID:21296886 MGI:4947900 NCBI chr 3:43,223,892...43,359,069
Ensembl chr 3:43,255,567...43,359,074
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4942413 (MGI:4943100|PMID:21377456) RGD PMID:21377456 MGI:4943100 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISS
ISO
GO_REF:0000024
(MGI:3703278|PMID:17331197)
UniProt
RGD
PMID:17331197 GO_REF:0000024 MGI:3703278 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
JBrowse link
G Hesx1 HESX homeobox 1 ISO MGI:3822474 (MGI:3821905|PMID:19093031) RGD PMID:19093031 MGI:3821905 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hsf4 heat shock transcription factor 4 ISO MGI:3056560|MGI:3057199 (MGI:3056833|PMID:15483628), (MGI:3721138|PMID:16595169) RGD PMID:15483628 PMID:16595169 MGI:3056833 MGI:3721138 NCBI chr19:37,225,800...37,232,048
Ensembl chr19:37,226,186...37,231,912
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO MGI:1857713 (MGI:1336582|PMID:10196361) RGD PMID:10196361 MGI:1336582 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Lama1 laminin subunit alpha 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lim2 lens intrinsic membrane protein 2 ISO MGI:1862040 (MGI:1197732|PMID:9238094) RGD PMID:9238094 MGI:1197732 NCBI chr 1:98,495,082...98,501,248
Ensembl chr 1:98,495,082...98,501,249
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO MGI:2158463|MGI:2386570|MGI:3714802 (MGI:1353150|PMID:10660670), (MGI:4461349|PMID:20568247) RGD PMID:10660670 PMID:20568247 MGI:1353150 MGI:4461349 NCBI chr 3:12,608,748...12,686,937
Ensembl chr 3:12,609,574...12,686,869
JBrowse link
G Mab21l1 mab-21 like 1 ISO (MGI:2652201|PMID:12642482) RGD PMID:12642482 MGI:2652201 NCBI chr 2:145,174,876...145,177,265
Ensembl chr 2:145,174,876...145,177,265
JBrowse link
G Mab21l2 mab-21 like 2 ISO MGI:3511363 (MGI:3510098|PMID:15385160) RGD PMID:15385160 MGI:3510098 NCBI chr 2:185,849,749...185,852,833
Ensembl chr 2:185,850,232...185,852,759
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:2676654 (MGI:2674169|PMID:12941696) RGD PMID:12941696 MGI:2674169 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:2684189 (MGI:2682174|PMID:14500757) RGD PMID:14500757 MGI:2682174 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Mitf melanocyte inducing transcription factor ISO MGI:88401 (MGI:3512656|PMID:15576400) RGD PMID:15576400 MGI:3512656 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532
JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 ISO MGI:5288506 (MGI:5287350|PMID:21531335) RGD PMID:21531335 MGI:5287350 NCBI chr 9:100,440,482...100,445,158
Ensembl chr 9:100,440,486...100,445,158
JBrowse link
G Mtnr1a melatonin receptor 1A IEP RGD PMID:12890503 RGD:9588674 NCBI chr16:50,339,358...50,358,809
Ensembl chr16:50,339,358...50,358,809
JBrowse link
G Mtnr1b melatonin receptor 1B IEP RGD PMID:12890503 RGD:9588674 NCBI chr 8:14,359,270...14,373,894
Ensembl chr 8:14,359,270...14,373,894
JBrowse link
G Myf5 myogenic factor 5 ISO MGI:1857973|MGI:3055340 (MGI:3849775|PMID:19531352) RGD PMID:19531352 MGI:3849775 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Neurod1 neuronal differentiation 1 ISO MGI:108055 (MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:2158684 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod4 neuronal differentiation 4 ISO MGI:1339708 (MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:2158684 NCBI chr 7:9,699,964...9,712,067
Ensembl chr 7:9,699,961...9,711,928
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:2176490|MGI:2176560 (MGI:3054148|PMID:15371513), (MGI:3582135|PMID:16000615) RGD PMID:15371513 PMID:16000615 MGI:3054148 MGI:3582135 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
MGI:1857673 (MGI:2662558|PMID:12756174)
UniProt
RGD
PMID:12756174 GO_REF:0000024 MGI:2662558 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax6 paired box 6 ISO MGI:102764|MGI:108564|MGI:1856158|MGI:1931308|MGI:1934347|MGI:1934348 (MGI:1927276|PMID:11069887), (MGI:1928799|PMID:11062307), (MGI:2181466|PMID:12072567), (MGI:2384485|PMID:12183364), (MGI:2654287|PMID:12648492), (MGI:2662558|PMID:12756174), (MGI:3584303|PMID:16080917) RGD PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 PMID:12756174 PMID:16080917 MGI:1927276 MGI:1928799 MGI:2181466 MGI:2384485 MGI:2654287 MGI:2662558 MGI:3584303 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Pcnt pericentrin ISO MGI:4340776 (MGI:5696764|PMID:25220058) RGD PMID:25220058 MGI:5696764 NCBI chr20:12,943,523...13,038,615
Ensembl chr20:12,944,786...13,038,431
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (PMID:9618168) RGD PMID:9618168 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 ISO MGI:3530910 (MGI:3653971|PMID:16847320) RGD PMID:16847320 MGI:3653971 NCBI chr20:10,331,608...10,358,922
Ensembl chr20:10,334,308...10,358,922
JBrowse link
G Prss56 serine protease 56 ISO (PMID:21397065)
MGI:5444189 (MGI:5441705|PMID:21532570)
RGD PMID:21397065 PMID:21532570 MGI:5441705 NCBI chr 9:94,278,981...94,284,111
Ensembl chr 9:94,279,155...94,283,919
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ISO
IEA
(PMID:20512159)
GO_REF:0000107
RGD
Ensembl
PMID:20512159 GO_REF:0000107 NCBI chr13:44,578,208...44,649,876
Ensembl chr13:44,615,553...44,648,620
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:98214 (MGI:1096258|PMID:9376317) RGD PMID:9376317 MGI:1096258 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Rax retina and anterior neural fold homeobox IEA
ISO
GO_REF:0000107
MGI:1856862|MGI:2152531 (MGI:1929394|PMID:11105055), (MGI:3575215|PMID:15789424), (MGI:48767|PMID:17247120), (MGI:54439|PMID:640224), (MGI:61292|PMID:13970081)
Ensembl
RGD
PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 GO_REF:0000107 MGI:1929394 MGI:3575215 MGI:48767 MGI:54439 MGI:61292 NCBI chr18:61,638,352...61,642,056
Ensembl chr18:61,638,352...61,642,056
JBrowse link
G Rcn1 reticulocalbin 1 ISO (MGI:4355498|PMID:19474196) RGD PMID:19474196 MGI:4355498 NCBI chr 3:95,404,863...95,419,110
Ensembl chr 3:95,406,284...95,418,679
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:9512345 RGD:633787 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197
JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:3716208 (MGI:3715393|PMID:17553904), (MGI:3716248|PMID:17558409) RGD PMID:17553904 PMID:17558409 MGI:3715393 MGI:3716248 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Rxra retinoid X receptor alpha ISO MGI:97858 (MGI:1096258|PMID:9376317) RGD PMID:9376317 MGI:1096258 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1934268|MGI:3052661|MGI:95729 (MGI:2385969|PMID:12195432), (MGI:2662556|PMID:12756179), (MGI:3608482|PMID:16236765), (MGI:3807419|PMID:18582859)
Ensembl
RGD
PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 GO_REF:0000107 MGI:2385969 MGI:2662556 MGI:3608482 MGI:3807419 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six3 SIX homeobox 3 ISO MGI:97490 (MGI:2181466|PMID:12072567) RGD PMID:12072567 MGI:2181466 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925
JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Slc25a25 solute carrier family 25 member 25 ISO MGI:99778 (MGI:4947900|PMID:21296886) RGD PMID:21296886 MGI:4947900 NCBI chr 3:11,442,396...11,476,186
Ensembl chr 3:11,442,397...11,452,529
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:4417931 (MGI:5513052|PMID:23543054) RGD PMID:23543054 MGI:5513052 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
ISS
(PMID:21901792)
GO_REF:0000024
RGD
UniProt
PMID:21901792 GO_REF:0000024 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO MGI:1856684 (MGI:3029604|PMID:14757819) RGD PMID:14757819 MGI:3029604 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
G Tbc1d32 TBC1 domain family, member 32 ISO MGI:4127851|MGI:4440463 (MGI:4439200|PMID:20159594) RGD PMID:20159594 MGI:4439200 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937
JBrowse link
G Tmem231 transmembrane protein 231 ISO MGI:4284576 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr19:44,137,444...44,158,624
Ensembl chr19:44,137,423...44,158,624
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan ISO
ISS
(MGI:5285004|PMID:21856951)
GO_REF:0000024
RGD
UniProt
PMID:21856951 GO_REF:0000024 MGI:5285004 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO MGI:88180 (MGI:3043486|PMID:14681194) RGD PMID:14681194 MGI:3043486 NCBI chr 9:113,699,151...113,732,601
Ensembl chr 9:113,699,170...113,732,622
JBrowse link
G Vax1 ventral anterior homeobox 1 ISO MGI:1346018 (MGI:3578573|PMID:15905411) RGD PMID:15905411 MGI:3578573 NCBI chr 1:280,334,897...280,338,813
Ensembl chr 1:280,334,897...280,338,813
JBrowse link
G Vax2 ventral anterior homeobox 2 ISO MGI:1277163 (MGI:3578573|PMID:15905411) RGD PMID:15905411 MGI:3578573 NCBI chr 4:115,388,839...115,412,515
Ensembl chr 4:115,388,839...115,412,515
JBrowse link
G Vsx2 visual system homeobox 2 ISO MGI:104554 (MGI:3512656|PMID:15576400) RGD PMID:15576400 MGI:3512656 NCBI chr 6:108,285,031...108,308,588
Ensembl chr 6:108,285,822...108,308,587
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector IEA
ISO
GO_REF:0000107
MGI:5558098|MGI:5558100 (MGI:5544506|PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
G Wt1 WT1 transcription factor ISS
ISO
GO_REF:0000024
MGI:1857268|MGI:2183642 (MGI:2176638|PMID:11889045), (MGI:3574744|PMID:15716344)
UniProt
RGD
PMID:11889045 PMID:15716344 GO_REF:0000024 MGI:2176638 MGI:3574744 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 ISO MGI:1857807 (MGI:2180433|PMID:11891232) RGD PMID:11891232 MGI:2180433 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Aqp5 aquaporin 5 ISO MGI:2150059 (MGI:2180433|PMID:11891232) RGD PMID:11891232 MGI:2180433 NCBI chr 7:141,249,044...141,252,576
Ensembl chr 7:141,249,044...141,252,578
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:88180 (MGI:1095762|PMID:9268572) RGD PMID:9268572 MGI:1095762 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO MGI:1857654|MGI:2136986 (MGI:3610441|PMID:16154126), (MGI:3701027|PMID:16854970) RGD PMID:16154126 PMID:16854970 MGI:3610441 MGI:3701027 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain ISO MGI:88464 (MGI:3587134|PMID:16051690) RGD PMID:16051690 MGI:3587134 NCBI chr11:44,877,690...45,006,203
Ensembl chr11:44,877,859...45,007,891
JBrowse link
G Col8a2 collagen type VIII alpha 2 chain ISO MGI:88463 (MGI:3587134|PMID:16051690) RGD PMID:16051690 MGI:3587134 NCBI chr 5:144,308,527...144,335,142
Ensembl chr 5:144,308,611...144,335,172
JBrowse link
G Ephb1 Eph receptor B1 ISO MGI:2677305 (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Ephb2 Eph receptor B2 ISO MGI:2149765 (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921
JBrowse link
G Gdf11 growth differentiation factor 11 ISO MGI:2449673 (MGI:3581514|PMID:15976303) RGD PMID:15976303 MGI:3581514 NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1856276 (MGI:52587|PMID:8387379) RGD PMID:8387379 MGI:52587 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Grcc10 gene rich cluster, C10 gene ISO (PMID:23453665), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23633300 PMID:24798461 NCBI chr 4:157,264,383...157,266,042
Ensembl chr 4:157,264,383...157,266,018
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO MGI:103223 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:3827087 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
JBrowse link
G Mfn2 mitofusin 2 ISO MGI:1861626 (MGI:3589043|PMID:16104381) RGD PMID:16104381 MGI:3589043 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO MGI:3605480 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS
GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
GO_REF:0000024
Ensembl
RGD
HGNC
PMID:7926784 GO_REF:0000024 GO_REF:0000107 MGI:66069 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Ring1 ring finger protein 1 ISO MGI:99150 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr20:3,812,287...3,815,834
Ensembl chr20:3,812,287...3,815,834
JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:3693412|PMID:17003410) RGD PMID:17003410 MGI:3693412 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Tenm3 teneurin transmembrane protein 3 ISO (PMID:22766609) RGD PMID:22766609 NCBI chr16:46,422,676...46,929,023
Ensembl chr16:46,731,403...46,926,245
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) RGD PMID:16251428 MGI:3607459 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
G Yy1 YY1 transcription factor ISO MGI:1101770 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dscam DS cell adhesion molecule ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776
JBrowse link
G Prom1 prominin 1 ISO
IBA
(PMID:18654668)
PMID:21873635
(MGI:3838023|PMID:19228982)
RGD PMID:18654668 PMID:19228982, PMID:21873635 MGI:3838023, RGD:13792537 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) RGD PMID:20300562 MGI:4437581 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO (MGI:5693671|PMID:26287463) RGD PMID:26287463 MGI:5693671 NCBI chr10:102,299,593...102,576,554
Ensembl chr10:102,303,028...102,576,878
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO GO:0060219 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO MGI:5140723 (MGI:5014119|PMID:21646512) RGD PMID:21646512 MGI:5014119 NCBI chr 6:122,920,308...122,974,525
Ensembl chr 6:122,920,317...122,974,522
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISS
ISO
PMID:17064680
(MGI:3703484|PMID:17064680)
RGD PMID:17064680, PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO
GO_REF:0000107
MGI:3692444 (MGI:5492288|PMID:23676271)
Ensembl
RGD
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Notch2 notch receptor 2 IEA
ISO
GO_REF:0000107
MGI:3617328 (MGI:5492288|PMID:23676271)
Ensembl
RGD
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5285004|PMID:21856951)
Ensembl
UniProt
RGD
PMID:21856951 GO_REF:0000024 GO_REF:0000107 MGI:5285004 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 ISO (MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:3719969 NCBI chr 5:150,533,895...150,609,423
Ensembl chr 5:150,546,430...150,609,352
JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO
GO_REF:0000024
(MGI:3797299|PMID:18423449)
UniProt
RGD
PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
cochlea development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr 8:77,107,355...77,237,483
Ensembl chr 8:77,107,536...77,237,483
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Calb1 calbindin 1 IEP RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:19429027 RGD:10054469 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Cdh1 cadherin 1 ISO MGI:2389021|MGI:3841145 (MGI:5297632|PMID:21925491), (MGI:6316556|PMID:30639848) RGD PMID:21925491 PMID:30639848 MGI:5297632 MGI:6316556 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader ISO MGI:3574034 (MGI:4880797|PMID:21246654) RGD PMID:21246654 MGI:4880797 NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
JBrowse link
G Dchs1 dachsous cadherin-related 1 ISO MGI:4867020 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Epha4 Eph receptor A4 ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:1931521 (MGI:3714212|PMID:17557302) RGD PMID:17557302 MGI:3714212 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:112,833,941...112,947,482
Ensembl chr 1:112,833,944...112,947,451
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr10:27,973,694...28,193,072
Ensembl chr10:27,973,681...28,187,565
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Gata2 GATA binding protein 2 IEP RGD PMID:20006695 RGD:9479067 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:20006695 RGD:9479067 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
MGI:1341884|MGI:2149672 (MGI:3794221|PMID:18302773)
Ensembl
RGD
PMID:18302773 GO_REF:0000107 MGI:3794221 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO MGI:104853|MGI:104876|MGI:2447620 (MGI:3794221|PMID:18302773) RGD PMID:18302773 MGI:3794221 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Ift20 intraflagellar transport 20 ISO MGI:3817268 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351
JBrowse link
G Ift27 intraflagellar transport 27 ISO MGI:4461616 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 7:119,393,384...119,409,710
Ensembl chr 7:119,393,384...119,409,710
JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:2135272 (MGI:3773480|PMID:18066062) RGD PMID:18066062 MGI:3773480 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:15094499 RGD:2316534 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IEP RGD PMID:15094499 RGD:2316534 NCBI chr 6:27,154,274...27,190,209
Ensembl chr 6:27,151,612...27,190,132
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 ISO (PMID:26196677) RGD PMID:26196677 NCBI chr 4:120,825,699...120,840,221
Ensembl chr 4:120,825,699...120,840,111
JBrowse link
G Musk muscle associated receptor tyrosine kinase IEP RGD PMID:18420419 RGD:2317082 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:10494076 RGD:2325650 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ocm oncomodulin IEP RGD PMID:16120789 RGD:7175527 NCBI chr12:12,611,121...12,634,472
Ensembl chr12:12,624,723...12,634,472
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:17828551 RGD:13208944 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Otof otoferlin IEP RGD PMID:17229086 RGD:2316502 NCBI chr 6:27,328,343...27,424,864
Ensembl chr 6:27,328,406...27,424,864
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Psap prosaposin ISO MGI:1888378 (MGI:3694123|PMID:17167097) RGD PMID:17167097 MGI:3694123 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
G Pvalb parvalbumin IEP RGD PMID:16120789 RGD:7175527 NCBI chr 7:119,428,657...119,443,674
Ensembl chr 7:119,429,019...119,441,487
JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:3716208 (MGI:5449641|PMID:22927466) RGD PMID:22927466 MGI:5449641 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Slc17a8 solute carrier family 17 member 8 IEP RGD PMID:24064385 RGD:9999152 NCBI chr 7:30,215,231...30,274,993
Ensembl chr 7:30,216,104...30,274,984
JBrowse link
G Slc26a5 solute carrier family 26 member 5 IEP RGD PMID:20006695 RGD:9479067 NCBI chr 4:9,795,811...9,860,904
Ensembl chr 4:9,821,541...9,860,571
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Sobp sine oculis binding protein homolog ISO (MGI:3801556|PMID:18579736) RGD PMID:18579736 MGI:3801556 NCBI chr20:47,731,713...47,910,466
Ensembl chr20:47,750,762...47,910,375
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:98715 (MGI:3773480|PMID:18066062) RGD PMID:18066062 MGI:3773480 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:1915838 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:106613 (MGI:3589836|PMID:16116426) RGD PMID:16116426 MGI:3589836 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO MGI:108100|MGI:94941 (MGI:3589836|PMID:16116426), (MGI:3821448|PMID:19008950) RGD PMID:16116426 PMID:19008950 MGI:3589836 MGI:3821448 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 ISO MGI:106613|MGI:2135272 (MGI:3821448|PMID:19008950) RGD PMID:19008950 MGI:3821448 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:1857803 (MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:1335261 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Frzb frizzled-related protein ISO MGI:98958 (MGI:3714704|PMID:17433286) RGD PMID:17433286 MGI:3714704 NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772
JBrowse link
G Fzd2 frizzled class receptor 2 IEA
ISO
GO_REF:0000107
MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:1857509 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO MGI:2135272 (MGI:4819429|PMID:20643356) RGD PMID:20643356 MGI:4819429 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Hpn hepsin ISS
ISO
GO_REF:0000024
(MGI:5306554|PMID:20683358)
UniProt
RGD
PMID:20683358 GO_REF:0000024 MGI:5306554 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Myo3a myosin IIIA ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
MGI:1857673|UniProtKB:Q00288 (MGI:3702803|PMID:16916509), (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:3702803 MGI:4822275 MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pou3f4 POU class 3 homeobox 4 ISS
ISO
GO_REF:0000024
UniProtKB:P70323 (MGI:5284768|PMID:18231833)
UniProt
RGD
PMID:18231833 GO_REF:0000024 MGI:5284768 NCBI chr  X:82,143,789...82,145,066
Ensembl chr  X:82,143,789...82,145,066
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO MGI:3640803 (MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:4830023 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:2655195 (MGI:2671031|PMID:12874121) RGD PMID:12874121 MGI:2671031 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
MGI:2385468|MGI:3841145 (MGI:4454502|PMID:20346939)
UniProt
RGD
PMID:20346939 GO_REF:0000024 MGI:4454502 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179136|UniProtKB:P62515 (MGI:3765363|PMID:17825816), (MGI:5284768|PMID:18231833)
UniProt
RGD
PMID:17825816 PMID:18231833 GO_REF:0000024 MGI:3765363 MGI:5284768 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tbx18 T-box transcription factor 18 ISO MGI:3044915 (MGI:3788971|PMID:18353863) RGD PMID:18353863 MGI:3788971 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
G Tshr thyroid stimulating hormone receptor IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:115,170,290...115,306,871
Ensembl chr 6:115,170,865...115,306,871
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 ISO (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 4:93,447,412...93,448,194 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:108100|MGI:1857642|MGI:1888513|MGI:2655333|MGI:98958 (MGI:3589836|PMID:16116426), (MGI:3714704|PMID:17433286), (MGI:3814781|PMID:18606138), (MGI:3821448|PMID:19008950), (MGI:4819429|PMID:20643356), (MGI:4837757|PMID:20940229) RGD PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 PMID:20940229 MGI:3589836 MGI:3714704 MGI:3814781 MGI:3821448 MGI:4819429 MGI:4837757 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
MGI:1857617|MGI:2135272 (MGI:3714704|PMID:17433286)
Ensembl
RGD
PMID:17433286 GO_REF:0000107 MGI:3714704 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IEA
ISO
GO_REF:0000107
MGI:1861230 (MGI:5294688|PMID:21980308)
Ensembl
RGD
PMID:21980308 GO_REF:0000107 MGI:5294688 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISS
ISO
PMID:17064680
(MGI:3703484|PMID:17064680)
RGD PMID:17064680, PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656
JBrowse link
G Kera keratocan ISO UniProtKB:O60938 (MGI:1855733|PMID:10802664) RGD PMID:10802664 MGI:1855733 NCBI chr 7:38,858,062...38,865,515
Ensembl chr 7:38,858,062...38,865,515
JBrowse link
G Krt12 keratin 12 ISO
ISS
IEA
(PMID:26758872)
MGI:3051854 (MGI:5752087|PMID:26758872), (MGI:85415|PMID:8977471)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8977471 PMID:26758872 GO_REF:0000024 GO_REF:0000107 MGI:5752087 MGI:85415 NCBI chr10:87,328,547...87,336,710
Ensembl chr10:87,328,549...87,335,823
JBrowse link
G Limk2 LIM domain kinase 2 ISO MGI:3612836 (MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:5646594 NCBI chr14:83,564,048...83,641,996
Ensembl chr14:83,573,928...83,641,892
JBrowse link
G Pax6 paired box 6 ISO (PMID:7550230) RGD PMID:7550230 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO
GO_REF:0000024
(MGI:3797299|PMID:18423449)
UniProt
RGD
PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2183192 (MGI:3610667|PMID:16186342) RGD PMID:16186342 MGI:3610667 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO MGI:3044412 (MGI:4949824|PMID:20574024) RGD PMID:20574024 MGI:4949824 NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510
JBrowse link
ear development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1197519|MGI:2156165 (MGI:2154874|PMID:11709185), (MGI:2156164|PMID:8170972)
Ensembl
RGD
PMID:8170972 PMID:11709185 GO_REF:0000107 MGI:2154874 MGI:2156164 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l11 BCL2 like 11 ISO MGI:88138 (MGI:2154874|PMID:11709185) RGD PMID:11709185 MGI:2154874 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Bmp5 bone morphogenetic protein 5 ISO MGI:2679550|MGI:3510601|MGI:3521993 (MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:5646594 NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 IEA
ISO
GO_REF:0000107
MGI:2388024 (MGI:1932625|PMID:11283268)
Ensembl
RGD
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr20:3,553,430...3,574,959
Ensembl chr20:3,552,929...3,575,780
JBrowse link
G Dlx5 distal-less homeobox 5 ISO MGI:2180474 (MGI:3611627|PMID:16330189) RGD PMID:16330189 MGI:3611627 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Ece1 endothelin converting enzyme 1 ISO (PMID:9915973) RGD PMID:9915973 NCBI chr 5:156,215,469...156,318,652
Ensembl chr 5:156,215,417...156,318,671
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO MGI:3836281 (MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:5646594 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Gata3 GATA binding protein 3 ISS
ISO
GO_REF:0000024
(PMID:19248180), (PMID:19723756)
UniProt
RGD
PMID:19248180 PMID:19723756 GO_REF:0000024 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gsc goosecoid homeobox ISO MGI:1857496 (MGI:76955|PMID:7555718) RGD PMID:7555718 MGI:76955 NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
JBrowse link
G Hmx3 H6 family homeobox 3 ISO (MGI:3612180|PMID:14695375) RGD PMID:14695375 MGI:3612180 NCBI chr 1:203,509,731...203,511,695
Ensembl chr 1:203,509,731...203,511,695
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 ISO MGI:4442387|MGI:4442398|MGI:5461152|MGI:5692073 (MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:5646594 NCBI chr 3:63,489,081...63,507,918
Ensembl chr 3:63,489,074...63,507,926
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Spag6l sperm associated antigen 6-like ISO
IEA
MGI:2662475 (MGI:5629989|PMID:25748314)
GO_REF:0000107
RGD
Ensembl
PMID:25748314 GO_REF:0000107 MGI:5629989 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tcf15 transcription factor 15 ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
JBrowse link
ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:1862038 (MGI:1861752|PMID:10932191) RGD PMID:10932191 MGI:1861752 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Gjb6 gap junction protein, beta 6 ISO MGI:2447863 (MGI:2447513|PMID:12490528) RGD PMID:12490528 MGI:2447513 NCBI chr15:37,400,888...37,411,656
Ensembl chr15:37,400,889...37,410,848
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:8291537) RGD PMID:8291537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179191 (MGI:3050165|PMID:15190012)
UniProt
RGD
PMID:15190012 GO_REF:0000024 MGI:3050165 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:5315747 (MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:5314316 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:1861722 (MGI:3700411|PMID:17184764) RGD PMID:17184764 MGI:3700411 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 ISO MGI:107928 (MGI:3042765|PMID:14623956), (MGI:3700411|PMID:17184764) RGD PMID:14623956 PMID:17184764 MGI:3042765 MGI:3700411 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Cdk20 cyclin-dependent kinase 20 ISO MGI:6113512 (MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:1859647 (MGI:3588480|PMID:15958512) RGD PMID:15958512 MGI:3588480 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fzd5 frizzled class receptor 5 ISO MGI:3574771|MGI:3583769 (MGI:3821812|PMID:18791178) RGD PMID:18791178 MGI:3821812 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Ift140 intraflagellar transport 140 ISO MGI:4458412 (MGI:5505384|PMID:23469164) RGD PMID:23469164 MGI:5505384 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
JBrowse link
G Nes nestin ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:187,343,109...187,352,972
Ensembl chr 2:187,344,056...187,352,969
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:1857844|MGI:1857846|MGI:1857880 (MGI:1344731|PMID:10498698), (MGI:1347482|PMID:10572050) RGD PMID:10498698 PMID:10572050 MGI:1344731 MGI:1347482 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like ISO MGI:3575541 (MGI:3530389|PMID:15661756) RGD PMID:15661756 MGI:3530389 NCBI chr 1:80,271,288...80,290,946
Ensembl chr 1:80,279,706...80,290,408
JBrowse link
G Rara retinoic acid receptor, alpha ISO MGI:97858 (MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:69060 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:97856 (MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:69060 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO MGI:4129326 (MGI:5298450|PMID:21945076) RGD PMID:21945076 MGI:5298450 NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:5315747 (MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:5314316 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO MGI:1857654 (MGI:1332362|PMID:10049573) RGD PMID:10049573 MGI:1332362 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:97490 (MGI:3807101|PMID:18653562) RGD PMID:18653562 MGI:3807101 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Cryaa crystallin, alpha A ISO MGI:3777403 (MGI:3775669|PMID:18056999) RGD PMID:18056999 MGI:3775669 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187
JBrowse link
G Foxf2 forkhead box F2 ISO (MGI:5297296|PMID:22022403) RGD PMID:22022403 MGI:5297296 NCBI chr17:34,150,417...34,156,450 JBrowse link
G Fzd5 frizzled class receptor 5 IEA
ISO
GO_REF:0000107
(MGI:3826935|PMID:18832390)
Ensembl
RGD
PMID:18832390 GO_REF:0000107 MGI:3826935 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO
GO_REF:0000107
(MGI:4818711|PMID:20579985)
Ensembl
RGD
PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Ift122 intraflagellar transport 122 ISO MGI:3578529 (MGI:6094959|PMID:28778798) RGD PMID:28778798 MGI:6094959 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
JBrowse link
G Ift172 intraflagellar transport 172 ISO MGI:2682066 (MGI:6094959|PMID:28778798) RGD PMID:28778798 MGI:6094959 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Kdm2b lysine demethylase 2B ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:2156191|MGI:4415718 (MGI:3823171|PMID:18985738), (MGI:4413396|PMID:19653321)
PMID:21873635
RGD PMID:18985738 PMID:19653321, PMID:21873635 MGI:3823171 MGI:4413396, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Pax6 paired box 6 IEA
ISO
GO_REF:0000107
MGI:1306784 (MGI:3807101|PMID:18653562)
Ensembl
RGD
PMID:18653562 GO_REF:0000107 MGI:3807101 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Sp1 Sp1 transcription factor ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Tbx2 T-box transcription factor 2 ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2176682 (MGI:1313057|PMID:9811866) RGD PMID:9811866 MGI:1313057 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Th tyrosine hydroxylase ISO (MGI:3617102|PMID:16445854) RGD PMID:16445854 MGI:3617102 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IEA
ISO
GO_REF:0000107
MGI:1857515 (MGI:3790562|PMID:18436818)
Ensembl
RGD
PMID:18436818 GO_REF:0000107 MGI:3790562 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 ISO MGI:1861722 (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) RGD PMID:16207763 PMID:16611695 MGI:3608158 MGI:3624188 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 ISO MGI:1353450|MGI:3043947 (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) RGD PMID:16207763 PMID:16611695 MGI:3608158 MGI:3624188 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 IEA
ISO
GO_REF:0000107
(PMID:25406291)
Ensembl
RGD
PMID:25406291 GO_REF:0000107 NCBI chr14:113,202,382...113,294,993
Ensembl chr14:113,202,419...113,295,014
JBrowse link
G Fbn1 fibrillin 1 ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fbn2 fibrillin 2 ISO (PMID:25406291) RGD PMID:25406291 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Foxl2 forkhead box L2 ISO MGI:3044226 (MGI:3043431|PMID:15056605) RGD PMID:15056605 MGI:3043431 NCBI chr 8:107,194,492...107,197,644
Ensembl chr 8:107,194,551...107,195,675
JBrowse link
G Mfap2 microfibril associated protein 2 ISO
IBA
(PMID:25406291)
PMID:21873635
RGD PMID:25406291, PMID:21873635 RGD:13792537 NCBI chr 5:159,534,202...159,539,750
Ensembl chr 5:159,534,202...159,539,750
JBrowse link
G Mfap5 microfibril associated protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:155,313,671...155,336,228
Ensembl chr 4:155,313,671...155,336,228
JBrowse link
G Rarb retinoic acid receptor, beta ISO MGI:97858 (MGI:3608158|PMID:16207763) RGD PMID:16207763 MGI:3608158 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:97857 (MGI:3608158|PMID:16207763) RGD PMID:16207763 MGI:3608158 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Vax2 ventral anterior homeobox 2 IEA
ISO
GO_REF:0000107
MGI:2159246 (MGI:1349226|PMID:10595508), (MGI:2157790|PMID:11830579)
Ensembl
RGD
PMID:10595508 PMID:11830579 GO_REF:0000107 MGI:1349226 MGI:2157790 NCBI chr 4:115,388,839...115,412,515
Ensembl chr 4:115,388,839...115,412,515
JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)
Ensembl
RGD
PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO
GO_REF:0000107
(MGI:4818711|PMID:20579985)
Ensembl
RGD
PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO
GO_REF:0000024
(MGI:3772525|PMID:18094249)
UniProt
RGD
PMID:18094249 GO_REF:0000024 MGI:3772525 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:4415718 (MGI:4413396|PMID:19653321)
PMID:21873635
RGD PMID:19653321, PMID:21873635 MGI:4413396, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:12692551) RGD PMID:12692551 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:1344892|PMID:10469643) RGD PMID:10469643 MGI:1344892 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO MGI:1856326 (MGI:3613415|PMID:14618389) RGD PMID:14618389 MGI:3613415 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Foxl2 forkhead box L2 ISO (PMID:12630957) RGD PMID:12630957 NCBI chr 8:107,194,492...107,197,644
Ensembl chr 8:107,194,551...107,195,675
JBrowse link
G Myh15 myosin, heavy chain 15 IEP RGD PMID:19948655 RGD:2317122 NCBI chr11:54,205,771...54,344,662
Ensembl chr11:54,204,775...54,344,615
JBrowse link
G Myom1 myomesin 1 IEP RGD PMID:12878677 RGD:633368 NCBI chr 9:119,353,840...119,469,196
Ensembl chr 9:119,353,840...119,468,715
JBrowse link
G Myom2 myomesin 2 IEP RGD PMID:12878677 RGD:633368 NCBI chr16:79,587,136...79,672,871
Ensembl chr16:79,587,640...79,671,719
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:1857844|MGI:1857846 (MGI:3624183|PMID:16638982), (MGI:4881620|PMID:21035439) RGD PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb5 ATP binding cassette subfamily B member 5 ISO (MGI:5585659|PMID:25030174) RGD PMID:25030174 MGI:5585659 NCBI chr 6:146,805,481...146,902,339
Ensembl chr 6:146,805,599...146,902,339
JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 ISO (PMID:23818446) RGD PMID:23818446 NCBI chr19:46,005,055...46,167,912
Ensembl chr19:46,005,277...46,101,250
JBrowse link
G Atf6 activating transcription factor 6 ISO (PMID:26029869) RGD PMID:26029869 NCBI chr13:89,053,457...89,242,531
Ensembl chr13:89,055,983...89,242,443
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO MGI:98715 (MGI:5314314|PMID:22228099) RGD PMID:22228099 MGI:5314314 NCBI chr 2:123,283,402...123,322,991
Ensembl chr 2:123,283,388...123,323,170
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 ISO (PMID:16385460) RGD PMID:16385460 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bmp4 bone morphogenetic protein 4 NOT ISO UniProtKB:P23359 (MGI:3610441|PMID:16154126) RGD PMID:16154126 MGI:3610441 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO UniProtKB:P23359 (MGI:3610441|PMID:16154126) RGD PMID:16154126 MGI:3610441 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:3610441|PMID:16154126) RGD PMID:16154126 MGI:3610441 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:2181740|PMID:12117821) RGD PMID:12117821 MGI:2181740 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Chrdl1 chordin-like 1 ISO
IEA
ISS
(PMID:22284829)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22284829 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:114,554,359...114,658,975
Ensembl chr  X:114,554,359...114,658,931
JBrowse link
G Cryga crystallin, gamma A ISO MGI:1857595 (MGI:3042503|PMID:15037589) RGD PMID:15037589 MGI:3042503 NCBI chr 9:71,828,308...71,855,900
Ensembl chr 9:71,835,883...71,852,113
Ensembl chr 9:71,835,883...71,852,113
JBrowse link
G Crygb crystallin, gamma B ISO MGI:1857597 (MGI:3042503|PMID:15037589) RGD PMID:15037589 MGI:3042503 NCBI chr 9:71,796,204...71,798,265
Ensembl chr 9:71,796,204...71,798,265
JBrowse link
G Crygc crystallin, gamma C ISO MGI:2176919 (MGI:3042503|PMID:15037589) RGD PMID:15037589 MGI:3042503 NCBI chr 9:71,786,246...71,788,281
Ensembl chr 9:71,786,248...71,788,281
JBrowse link
G Crygd crystallin, gamma D ISO MGI:2387106 (MGI:3042503|PMID:15037589) RGD PMID:15037589 MGI:3042503 NCBI chr 9:71,776,568...71,778,323
Ensembl chr 9:71,764,318...71,778,323
JBrowse link
G Cst3 cystatin C IEP RGD PMID:11431459 RGD:2306512 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
G Fgf9 fibroblast growth factor 9 ISO (MGI:5291533|PMID:21858205) RGD PMID:21858205 MGI:5291533 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Foxc1 forkhead box C1 ISO (PMID:9792859)
MGI:1856705|MGI:1857869 (MGI:1261705|PMID:9635428), (MGI:1335260|PMID:10072431)
RGD PMID:9635428 PMID:9792859 PMID:10072431 MGI:1261705 MGI:1335260 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxe3 forkhead box E3 ISO
ISS
(PMID:27218149)
MGI:1856851 (MGI:1352262|PMID:10652278)
GO_REF:0000024
RGD
UniProt
PMID:10652278 PMID:27218149 GO_REF:0000024 MGI:1352262 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 ISO (PMID:29688405), (PMID:30802441)
MGI:3794302 (MGI:5646594|PMID:26234751), (MGI:6368066|PMID:30802441)
RGD PMID:26234751 PMID:29688405 PMID:30802441 MGI:5646594 MGI:6368066 NCBI chr 2:142,747,501...142,885,604
Ensembl chr 2:142,747,501...142,885,604
JBrowse link
G Gdf3 growth differentiation factor 3 ISO (PMID:19864492) RGD PMID:19864492 NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998
JBrowse link
G Hmgb1 high mobility group box 1 ISO MGI:3530901 (MGI:1339514|PMID:10391216) RGD PMID:10391216 MGI:1339514 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hsf4 heat shock transcription factor 4 ISO MGI:3056560 (MGI:3056236|PMID:15343150) RGD PMID:15343150 MGI:3056236 NCBI chr19:37,225,800...37,232,048
Ensembl chr19:37,226,186...37,231,912
JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:1918742 (MGI:5314314|PMID:22228099) RGD PMID:22228099 MGI:5314314 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Mab21l1 mab-21 like 1 ISO (PMID:27103078), (PMID:30487245) RGD PMID:27103078 PMID:30487245 NCBI chr 2:145,174,876...145,177,265
Ensembl chr 2:145,174,876...145,177,265
JBrowse link
G Mab21l2 mab-21 like 2 ISO (PMID:24906020), (PMID:25719200) RGD PMID:24906020 PMID:25719200 NCBI chr 2:185,849,749...185,852,833
Ensembl chr 2:185,850,232...185,852,759
JBrowse link
G Meis1 Meis homeobox 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:103,182,178...103,321,809
Ensembl chr14:103,181,281...103,321,270
JBrowse link
G Meis2 Meis homeobox 2 ISO
IBA
MGI:97490 (MGI:2384485|PMID:12183364)
PMID:21873635
RGD PMID:12183364, PMID:21873635 MGI:2384485, RGD:13792537 NCBI chr 3:107,560,172...107,762,732
Ensembl chr 3:107,559,997...107,760,589
JBrowse link
G Meis3 Meis homeobox 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:78,065,617...78,079,698
Ensembl chr 1:78,068,931...78,079,862
JBrowse link
G Pbx1 PBX homeobox 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Pbx2 PBX homeobox 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,357,805...4,362,730
Ensembl chr20:4,357,733...4,362,682
JBrowse link
G Pbx3 PBX homeobox 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:13,241,031...13,436,084
Ensembl chr 3:13,182,024...13,525,983
JBrowse link
G Pbx4 PBX homeobox 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:21,303,117...21,338,771
Ensembl chr16:21,303,837...21,338,771
JBrowse link
G Rab18 RAB18, member RAS oncogene family ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr17:59,844,781...59,876,170
Ensembl chr17:59,844,781...59,876,164
JBrowse link
G Rbp4 retinol binding protein 4 ISO (PMID:10232633)
(MGI:3604178|PMID:15994349)
RGD PMID:10232633 PMID:15994349 MGI:3604178 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Sall2 spalt-like transcription factor 2 ISO (PMID:24412933) RGD PMID:24412933 NCBI chr15:28,728,471...28,746,042
Ensembl chr15:28,728,140...28,746,042
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B ISO (PMID:20137777)
(MGI:4439252|PMID:20137777)
RGD PMID:20137777 MGI:4439252 NCBI chr10:17,209,152...17,296,449
Ensembl chr10:17,209,212...17,291,876
JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 ISS
ISO
GO_REF:0000024
(MGI:5697095|PMID:26231217)
UniProt
RGD
PMID:26231217 GO_REF:0000024 MGI:5697095 NCBI chr 1:87,260,832...87,467,846
Ensembl chr 1:87,260,835...87,468,288
JBrowse link
G Six3 SIX homeobox 3 ISO
IBA
(PMID:18791198)
PMID:21873635
(MGI:2182264|PMID:12050133)
RGD PMID:12050133 PMID:18791198, PMID:21873635 MGI:2182264, RGD:13792537 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925
JBrowse link
G Six6 SIX homeobox 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,816,749...95,821,729
Ensembl chr 6:95,816,749...95,821,729
JBrowse link
G Slc39a5 solute carrier family 39 member 5 ISO (PMID:24891338) RGD PMID:24891338 NCBI chr 7:2,813,875...2,819,917
Ensembl chr 7:2,813,875...2,819,299
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor ISS
ISO
GO_REF:0000024
(MGI:5775676|PMID:27018474)
UniProt
RGD
PMID:27018474 GO_REF:0000024 MGI:5775676 NCBI chr 1:81,259,450...81,282,893
Ensembl chr 1:81,260,548...81,282,887
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 ISO (PMID:21194678)
(MGI:4939981|PMID:21194678)
RGD PMID:21194678 MGI:4939981 NCBI chr 6:104,718,403...104,879,611
Ensembl chr 6:104,718,512...104,877,980
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (PMID:18285410) RGD PMID:18285410 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO
ISS
(PMID:15944186)
GO_REF:0000024
RGD
AgBase
PMID:15944186 GO_REF:0000024 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Zdhhc16 zinc finger DHHC-type palmitoyltransferase 16 ISO (MGI:5706675|PMID:26644582) RGD PMID:26644582 MGI:5706675 NCBI chr 1:261,179,971...261,191,374
Ensembl chr 1:261,180,007...261,191,367
JBrowse link
eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain IEA
ISO
GO_REF:0000107
(PMID:16431952)
Ensembl
RGD
PMID:16431952 GO_REF:0000107 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a2 collagen type V alpha 2 chain ISO (PMID:16431952) RGD PMID:16431952 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:2388397 (MGI:2138055|PMID:11456441) RGD PMID:11456441 MGI:2138055 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:8291537) RGD PMID:8291537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:22940085 RGD:10043154 NCBI chr 5:2,257,910...2,497,429 JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO MGI:2676366 (MGI:2675211|PMID:12915475), (MGI:4849309|PMID:21052544) RGD PMID:12915475 PMID:21052544 MGI:2675211 MGI:4849309 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal ISO MGI:3612338 (MGI:3610644|PMID:16043865) RGD PMID:16043865 MGI:3610644 NCBI chr10:109,528,307...109,540,675
Ensembl chr10:109,533,487...109,540,026
JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho 2 NOT ISO MGI:2446461 (MGI:2179933|PMID:12019334) RGD PMID:12019334 MGI:2179933 NCBI chr 5:48,303,366...48,341,571
Ensembl chr 5:48,303,366...48,341,642
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO MGI:2152779 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO MGI:3783323 (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr 4:28,972,339...28,975,419
Ensembl chr 4:28,972,434...28,975,419
JBrowse link
G Mfrp membrane frizzled-related protein ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 8:48,437,720...48,443,421
Ensembl chr 8:48,437,918...48,443,421
JBrowse link
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 8:64,797,518...64,801,587
Ensembl chr 8:64,797,518...64,800,467
JBrowse link
G Olfm3 olfactomedin 3 IDA RGD PMID:12019210 RGD:633402 NCBI chr 2:217,779,983...218,005,710
Ensembl chr 2:217,963,456...218,005,509
JBrowse link
G Pax6 paired box 6 IEA
ISO
GO_REF:0000107
MGI:1856158 (MGI:2654287|PMID:12648492)
Ensembl
RGD
PMID:12648492 GO_REF:0000107 MGI:2654287 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Prdm1 PR/SET domain 1 ISO MGI:3605621|MGI:3608904|MGI:4881674 (MGI:4454584|PMID:20463215) RGD PMID:20463215 MGI:4454584 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Prkci protein kinase C, iota ISO MGI:3526850|MGI:3608904 (MGI:3607414|PMID:16267237) RGD PMID:16267237 MGI:3607414 NCBI chr 2:115,941,998...116,002,550
Ensembl chr 2:115,941,993...116,002,561
JBrowse link
G Psen1 presenilin 1 NAS RGD PMID:12736250 RGD:724403 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Rbp3 retinol binding protein 3 NAS RGD PMID:7916695 RGD:633871 NCBI chr16:10,277,775...10,286,243
Ensembl chr16:10,277,775...10,286,243
JBrowse link
G Rdh13 retinol dehydrogenase 13 ISO MGI:5467544 (MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:5462166 NCBI chr 1:72,956,017...72,983,811
Ensembl chr 1:72,956,026...72,984,350
JBrowse link
G Rorb RAR-related orphan receptor B ISS
ISO
GO_REF:0000024
(MGI:3652638|PMID:16574740)
UniProt
RGD
PMID:16574740 GO_REF:0000024 MGI:3652638 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839
JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO MGI:2386674 (MGI:2654998|PMID:12651948) RGD PMID:12651948 MGI:2654998 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486
JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO MGI:2655714 (MGI:2654998|PMID:12651948) RGD PMID:12651948 MGI:2654998 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737
JBrowse link
G Th tyrosine hydroxylase ISO (MGI:3617102|PMID:16445854) RGD PMID:16445854 MGI:3617102 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
G Tulp1 TUB like protein 1 ISO (MGI:4397555|PMID:19218615) RGD PMID:19218615 MGI:4397555 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) RGD PMID:16251428 MGI:3607459 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding protein 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435
JBrowse link
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha ISO UniProtKB:F6T226 (PMID:15687260) RGD PMID:15687260 NCBI chr 8:109,481,352...109,621,462
Ensembl chr 8:109,482,614...109,621,408
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISS
ISO
GO_REF:0000024
(MGI:3045481|PMID:15207851)
UniProt
RGD
PMID:15207851 GO_REF:0000024 MGI:3045481 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx2 orthodenticle homeobox 2 ISO MGI:2178753 (MGI:2680889|PMID:14625556) RGD PMID:14625556 MGI:2680889 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor ISO MGI:98354 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO MGI:1856837 (MGI:4947318|PMID:21262862) RGD PMID:21262862 MGI:4947318 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Inhba inhibin subunit beta A ISS
ISO
GO_REF:0000024
UniProtKB:Q04999 (MGI:2682175|PMID:14551263)
UniProt
RGD
PMID:14551263 GO_REF:0000024 MGI:2682175 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO MGI:2673694 (MGI:5608927|PMID:25224220) RGD PMID:25224220 MGI:5608927 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Kmt2c lysine methyltransferase 2C ISO MGI:3693319 (MGI:3692812|PMID:17021013) RGD PMID:17021013 MGI:3692812 NCBI chr 4:82,506...109,986
NCBI chr 4:6,083,650...6,294,413
Ensembl chr 4:6,083,736...6,292,516
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:2676654 (MGI:5467663|PMID:23201579), (MGI:5608927|PMID:25224220) RGD PMID:23201579 PMID:25224220 MGI:5467663 MGI:5608927 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISS
ISO
GO_REF:0000024
(MGI:3848564|PMID:19389375)
UniProt
RGD
PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO MGI:95294 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr 6:3,105,443...3,182,977
Ensembl chr 6:3,104,861...3,182,996
JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO
GO_REF:0000024
(MGI:3052265|PMID:15254231)
UniProt
RGD
PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Srf serum response factor ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISS
ISO
GO_REF:0000024
(MGI:1313057|PMID:9811866)
UniProt
RGD
PMID:9811866 GO_REF:0000024 MGI:1313057 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
fungiform papilla development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:3582610 (MGI:3703195|PMID:17284610) RGD PMID:17284610 MGI:3703195 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
fungiform papilla formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
(MGI:3696593|PMID:17128274)
Ensembl
RGD
PMID:17128274 GO_REF:0000107 MGI:3696593 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
fungiform papilla morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IMP RGD PMID:15581865 RGD:1580345 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:5448822 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:5448822|PMID:21978088) RGD PMID:21978088 MGI:5448822 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
horizontal cell localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO (MGI:3772525|PMID:18094249) RGD PMID:18094249 MGI:3772525 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
hyaloid vascular plexus regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 ISS
ISO
GO_REF:0000024
(MGI:6359287|PMID:30936473)
UniProt
RGD
PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISS
ISO
GO_REF:0000024
(MGI:6359287|PMID:30936473)
UniProt
RGD
PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Ninj1 ninjurin 1 ISO (MGI:4940188|PMID:19557008) RGD PMID:19557008 MGI:4940188 NCBI chr17:15,866,235...15,881,284
Ensembl chr17:15,866,237...15,881,327
JBrowse link
G Opn4 opsin 4 ISS
ISO
GO_REF:0000024
(MGI:6359287|PMID:30936473)
UniProt
RGD
PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549
JBrowse link
G Opn5 opsin 5 ISO (MGI:6359287|PMID:30936473) RGD PMID:30936473 MGI:6359287 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172
JBrowse link
G Slc17a6 solute carrier family 17 member 6 ISS
ISO
GO_REF:0000024
(MGI:6359287|PMID:30936473)
UniProt
RGD
PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 1:106,980,463...107,038,717
Ensembl chr 1:106,998,623...107,038,704
JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISS
ISO
GO_REF:0000024
(MGI:6359287|PMID:30936473)
UniProt
RGD
PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 1:32,323,011...32,363,983
Ensembl chr 1:32,321,580...32,363,983
JBrowse link
G Th tyrosine hydroxylase ISS
ISO
GO_REF:0000024
(MGI:6359287|PMID:30936473)
UniProt
RGD
PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
inner ear auditory receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:2155983|MGI:2155984 (MGI:2178088|PMID:11973280), (MGI:3525036|PMID:15543141) RGD PMID:11973280 PMID:15543141 MGI:2178088 MGI:3525036 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:1856228 (MGI:3625226|PMID:12121736) RGD PMID:12121736 MGI:3625226 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Clrn2 clarin 2 ISO MGI:5792002!MGI:6458758 (MGI:6376373|PMID:31448880) RGD PMID:31448880 MGI:6376373 NCBI chr14:70,150,983...70,160,624
Ensembl chr14:70,150,983...70,160,624
JBrowse link
G Cux1 cut-like homeobox 1 ISO MGI:2388352 (MGI:2149924|PMID:11544187) RGD PMID:11544187 MGI:2149924 NCBI chr12:23,150,886...23,470,095
Ensembl chr12:23,151,180...23,445,074
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:2449921 (MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:2429425 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO MGI:2681910 (MGI:2680830|PMID:12405956) RGD PMID:12405956 MGI:2680830 NCBI chr14:41,663,688...41,787,331
Ensembl chr14:41,663,688...41,786,084
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IMP
ISO
IEA
MGI:1932522|MGI:3623344 (MGI:3621102|PMID:16495313)
GO_REF:0000107
RGD
Ensembl
PMID:16495313, PMID:10887092 GO_REF:0000107 MGI:3621102, RGD:1582345 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO MGI:3050114 (MGI:3052624|PMID:15328414), (MGI:3697555|PMID:17074442) RGD PMID:15328414 PMID:17074442 MGI:3052624 MGI:3697555 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Mcoln3 mucolipin TRP cation channel 3 ISO MGI:1856230 (MGI:2445676|PMID:12403827) RGD PMID:12403827 MGI:2445676 NCBI chr 2:251,930,532...252,007,722
Ensembl chr 2:251,983,339...252,007,560
JBrowse link
G Myo6 myosin VI ISO
IBA
MGI:1856555 (MGI:1346380|PMID:10525338), (MGI:53523|PMID:5980120), (MGI:77423|PMID:7493015)
PMID:21873635
RGD PMID:5980120 PMID:7493015 PMID:10525338, PMID:21873635 MGI:1346380 MGI:53523 MGI:77423, RGD:13792537 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Myo7a myosin VIIA ISO MGI:1860092|MGI:2155422|MGI:3511858 (MGI:2156358|PMID:11753415), (MGI:3510503|PMID:15389316), (MGI:3625226|PMID:12121736) RGD PMID:11753415 PMID:12121736 PMID:15389316 MGI:2156358 MGI:3510503 MGI:3625226 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:1856394 (MGI:3616414|PMID:16481439) RGD PMID:16481439 MGI:3616414 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pls3 plastin 3 IEP RGD PMID:12378542 RGD:731234 NCBI chr  X:119,030,311...119,124,268
Ensembl chr  X:119,030,419...119,124,250
JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO MGI:1857425|MGI:2176270 (MGI:2451279|PMID:12585968), (MGI:80981|PMID:8637595) RGD PMID:8637595 PMID:12585968 MGI:2451279 MGI:80981 NCBI chr18:36,713,869...36,716,461
Ensembl chr18:36,713,869...36,716,461
JBrowse link
G Ush1c USH1 protein network component harmonin ISO
IBA
MGI:2651858|MGI:2651859 (MGI:2675093|PMID:14519688)
PMID:21873635
RGD PMID:14519688, PMID:21873635 MGI:2675093, RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
inner ear development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 ISO MGI:3046273 (MGI:3629345|PMID:16775142) RGD PMID:16775142 MGI:3629345 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B IEA
ISO
GO_REF:0000107
MGI:5003050 (MGI:5003056|PMID:21636789)
Ensembl
RGD
PMID:21636789 GO_REF:0000107 MGI:5003056 NCBI chr 5:62,070,709...62,094,633
Ensembl chr 5:62,071,346...62,094,633
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:3767172 (MGI:4939574|PMID:21146598) RGD PMID:21146598 MGI:4939574 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Bdnf brain-derived neurotrophic factor ISO MGI:1857136 (MGI:74182|PMID:7605630) RGD PMID:7605630 MGI:74182 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bmp2 bone morphogenetic protein 2 IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmper BMP-binding endothelial regulator ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 8:24,369,916...24,615,484
Ensembl chr 8:24,369,916...24,615,479
JBrowse link
G C1qb complement C1q B chain IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 5:155,246,444...155,251,995
Ensembl chr 5:155,246,447...155,252,003
JBrowse link
G C1qtnf5 C1q and TNF related 5 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 8:48,443,515...48,445,639
Ensembl chr 8:48,443,767...48,445,637
JBrowse link
G Ccm2 CCM2 scaffold protein ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr14:86,812,728...86,859,408
Ensembl chr14:86,813,082...86,859,406
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:1856228|MGI:1856681|MGI:3028349 (MGI:3027690|PMID:14759567), (MGI:61338|PMID:13336002), (MGI:81497|PMID:8790740) RGD PMID:8790740 PMID:13336002 PMID:14759567 MGI:3027690 MGI:61338 MGI:79257 MGI:81497 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B ISO MGI:1857146 (MGI:1332249|PMID:10079221) RGD PMID:10079221 MGI:1332249 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr11:89,008,008...89,009,146
Ensembl chr11:89,008,008...89,009,146
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO (MGI:1334159|PMID:10100048) RGD PMID:10100048 MGI:1334159 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Cxcl14 C-X-C motif chemokine ligand 14 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr17:9,109,731...9,117,754
Ensembl chr17:9,109,731...9,117,750
JBrowse link
G Cys1 cystin 1 ISO MGI:1856831 (MGI:49533|PMID:1952600) RGD PMID:1952600 MGI:49533 NCBI chr 6:43,844,937...43,862,131
Ensembl chr 6:43,844,937...43,862,131
JBrowse link
G Cytl1 cytokine like 1 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr14:77,805,137...77,810,147
Ensembl chr14:77,805,130...77,810,147
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IEA
ISO
GO_REF:0000107
MGI:1932522|MGI:3044907 (MGI:3621102|PMID:16495313)
Ensembl
RGD
PMID:16495313 GO_REF:0000107 MGI:3621102 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Duox2 dual oxidase 2 ISO
IEA
MGI:3712359 (MGI:3712355|PMID:17440044)
GO_REF:0000107
RGD
Ensembl
PMID:17440044 GO_REF:0000107 MGI:3712355 NCBI chr 3:114,218,187...114,237,808
Ensembl chr 3:114,218,193...114,235,933
JBrowse link
G Esrrb estrogen-related receptor beta ISS
ISO
GO_REF:0000024
(MGI:3722975|PMID:17765677)
UniProt
RGD
PMID:17765677 GO_REF:0000024 MGI:3722975 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 IEP RGD PMID:11159937 RGD:1598918 NCBI chr 1:23,237,617...23,611,580
Ensembl chr 1:23,409,408...23,610,164
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:1931521 (MGI:3695846|PMID:17117437) RGD PMID:17117437 MGI:3695846 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 2:142,747,501...142,885,604
Ensembl chr 2:142,747,501...142,885,604
JBrowse link
G Gjb2 gap junction protein, beta 2 IEP RGD PMID:10570462 RGD:1599834 NCBI chr15:37,377,313...37,394,494
Ensembl chr15:37,377,316...37,383,277
JBrowse link
G Gjb6 gap junction protein, beta 6 IEP RGD PMID:10570462 RGD:1599834 NCBI chr15:37,400,888...37,411,656
Ensembl chr15:37,400,889...37,410,848
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:98297 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO MGI:1856991 (MGI:61338|PMID:13336002) RGD PMID:13336002 MGI:61338 NCBI chr14:41,663,688...41,787,331
Ensembl chr14:41,663,688...41,786,084
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Hoxa13 homeo box A13 ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Hpca hippocalcin ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 5:147,295,124...147,305,757
Ensembl chr 5:147,294,820...147,303,346
JBrowse link
G Igf1 insulin-like growth factor 1 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr14:33,010,300...33,070,193
Ensembl chr14:33,010,300...33,070,190
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO (MGI:3848573|PMID:19389353) RGD PMID:19389353 MGI:3848573 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:1928449|PMID:11120752)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11120752 GO_REF:0000024 GO_REF:0000107 MGI:1928449 NCBI chr 1:216,293,087...216,630,339
Ensembl chr 1:216,293,087...216,630,339
JBrowse link
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr 7:58,447,097...58,587,787
Ensembl chr 7:58,448,277...58,587,787
JBrowse link
G Lhx3 LIM homeobox 3 ISO (PMID:18407919) RGD PMID:18407919 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 7:49,429,613...49,627,835
Ensembl chr 7:49,385,705...49,656,856
JBrowse link
G LOC100909593 class II histocompatibility antigen, M alpha chain-like ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr20:3,935,501...3,938,915 JBrowse link
G Lrp10 LDL receptor related protein 10 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr15:33,107,706...33,114,831
Ensembl chr15:33,108,671...33,114,829
JBrowse link
G Maf MAF bZIP transcription factor ISO
IEA
(MGI:5140238|PMID:21795542)
GO_REF:0000107
RGD
Ensembl
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr19:48,179,826...48,200,995
Ensembl chr19:48,194,804...48,196,748
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Mnda myeloid cell nuclear differentiation antigen ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr13:92,073,664...92,091,335
Ensembl chr13:92,073,668...92,089,980
JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 ISO (MGI:3776221|PMID:16041630) RGD PMID:16041630 MGI:3776221 NCBI chr 6:26,585,713...26,600,265
Ensembl chr 6:26,587,443...26,599,511
JBrowse link
G Myo3a myosin IIIA ISO MGI:4849286 (MGI:4849846|PMID:21165622) RGD PMID:21165622 MGI:4849846 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo6 myosin VI ISO MGI:1856555 (MGI:1346380|PMID:10525338), (MGI:53523|PMID:5980120), (MGI:77423|PMID:7493015) RGD PMID:5980120 PMID:7493015 PMID:10525338 MGI:1346380 MGI:53523 MGI:77423 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Myo7a myosin VIIA ISO MGI:1856716|MGI:1860092|MGI:2155423 (MGI:1197790|PMID:9435277), (MGI:61338|PMID:13336002), (MGI:63018|PMID:14198707), (MGI:76086|PMID:6627025) RGD PMID:6627025 PMID:9435277 PMID:13336002 PMID:14198707 MGI:1197790 MGI:61338 MGI:63006 MGI:63018 MGI:76086 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Neurod1 neuronal differentiation 1 ISS
ISO
GO_REF:0000024
(MGI:1929186|PMID:11152640)
UniProt
RGD
PMID:11152640 GO_REF:0000024 MGI:1929186 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:1855958|MGI:2151877|MGI:2183469 (MGI:1928787|PMID:10978835), (MGI:3574187|PMID:15811708) RGD PMID:10978835 PMID:15811708 MGI:1928787 MGI:3574187 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pdgfa platelet derived growth factor subunit A IEP RGD PMID:15267171 RGD:2292167 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEP RGD PMID:15267171 RGD:2292167 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta IEP RGD PMID:15267171 RGD:2292167 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Phox2b paired-like homeobox 2b ISO MGI:1926861 (MGI:3621705|PMID:12885554) RGD PMID:12885554 MGI:3621705 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
JBrowse link
G Plppr4 phospholipid phosphatase related 4 IEA
ISO
GO_REF:0000107
(MGI:5140238|PMID:21795542)
Ensembl
RGD
PMID:21795542 GO_REF:0000107 MGI:5140238 NCBI chr 2:220,298,239...220,341,863
Ensembl chr 2:220,298,245...220,341,866
JBrowse link
G Pou3f4 POU class 3 homeobox 4 ISO MGI:1856631|MGI:1857990 (MGI:1351526|PMID:10587581), (MGI:3656465|PMID:15655183) RGD PMID:10587581 PMID:15655183 MGI:1351526 MGI:3656465 NCBI chr  X:82,143,789...82,145,066
Ensembl chr  X:82,143,789...82,145,066
JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO MGI:1857425 (MGI:1095801|PMID:9256502), (MGI:1277883|PMID:9735355) RGD PMID:9256502 PMID:9735355 MGI:1095801 MGI:1277883 NCBI chr18:36,713,869...36,716,461
Ensembl chr18:36,713,869...36,716,461
JBrowse link
G Prox1 prospero homeobox 1 ISO MGI:2386336 (MGI:4437346|PMID:20186345) RGD PMID:20186345 MGI:4437346 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO (PMID:12058348) RGD PMID:12058348 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 ISO (MGI:5776284|PMID:27162350) RGD PMID:27162350 MGI:5776284 NCBI chr 5:118,892,874...119,239,528
Ensembl chr 5:119,097,715...119,241,733
JBrowse link
G RT1-DMa RT1 class II, locus DMa ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr20:3,935,512...3,938,915
Ensembl chr20:5,240,975...5,244,386
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 ISO (MGI:5140238|PMID:21795542) RGD PMID:21795542 MGI:5140238 NCBI chr20:3,176,124...3,180,825
Ensembl chr20:3,176,107...3,179,818
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1934261|MGI:95729 (MGI:3709667|PMID:17395647)
Ensembl
RGD
PMID:17395647 GO_REF:0000107 MGI:3709667 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:3848573|PMID:19389353) RGD PMID:19389353 MGI:3848573 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Slc25a27 solute carrier family 25, member 27 IEP RGD PMID:21397696 RGD:6482846 NCBI chr 9:19,880,468...19,907,506
Ensembl chr 9:19,880,473...19,907,458
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 IEP RGD PMID:16160858 RGD:1643220 NCBI chr10:14,003,330...14,015,066
Ensembl chr10:14,003,320...14,013,870
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO
IBA
(PMID:18407919)
PMID:21873635
RGD PMID:18407919, PMID:21873635 RGD:13792537 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP RGD PMID:11335086 RGD:2300061 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Stox1 storkhead box 1 ISO (MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:5635320 NCBI chr20:32,276,857...32,353,677
Ensembl chr20:32,276,658...32,353,677
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:16479080 RGD:2302094 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP
ISO
(MGI:894212|PMID:9217007) RGD PMID:9217007, PMID:16479080 MGI:894212, RGD:2302094 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IEP RGD PMID:16479080 RGD:2302094 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase ISO MGI:88141 (MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:3622851 NCBI chr10:64,565,121...64,657,079
Ensembl chr10:64,567,268...64,657,089
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 IEA
ISO
GO_REF:0000107
MGI:3043947 (MGI:5488831|PMID:23536097)
Ensembl
RGD
PMID:23536097 GO_REF:0000107 MGI:5488831 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:2155983|MGI:2155984 (MGI:3525036|PMID:15543141), (MGI:3607238|PMID:16145671) RGD PMID:15543141 PMID:16145671 MGI:3525036 MGI:3607238 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:1857876 (MGI:1275896|PMID:9668038) RGD PMID:9668038 MGI:1275896 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 NOT ISO
ISS
(PMID:19639346)
(MGI:2669353|PMID:12782355)
GO_REF:0000024
RGD
UniProt
PMID:12782355 PMID:19639346 GO_REF:0000024 MGI:2669353 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Atp8a2 ATPase phospholipid transporting 8A2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:39,955,689...40,488,737
Ensembl chr15:40,000,322...40,428,800
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase ISO MGI:107771 (MGI:3622851|PMID:11921339) RGD PMID:11921339 MGI:3622851 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:1856229|MGI:1856681|MGI:2665714 (MGI:3579755|PMID:15925194), (MGI:75953|PMID:7610888) RGD PMID:7610888 PMID:15925194 MGI:3579755 MGI:61210 MGI:75953 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:1862019|MGI:2668337 (MGI:2667273|PMID:12842012) RGD PMID:12842012 MGI:2667273 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (PMID:15300250)
MGI:3511552 (MGI:3056111|PMID:15353999)
RGD PMID:15300250 PMID:15353999 MGI:3056111 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit ISO MGI:3774038 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr 1:167,206,722...167,212,199
Ensembl chr 1:167,206,722...167,210,919
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit ISO MGI:2158742 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr14:43,883,450...43,890,171
Ensembl chr14:43,883,458...43,890,171
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO MGI:1856399 (MGI:49531|PMID:1952599) RGD PMID:1952599 MGI:49531 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEA
ISO
GO_REF:0000107
MGI:1857275 (MGI:892501|PMID:9165353)
Ensembl
RGD
PMID:9165353 GO_REF:0000107 MGI:892501 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Dlx5 distal-less homeobox 5 IEA
ISO
GO_REF:0000107
MGI:101927|MGI:2180474 (MGI:2384365|PMID:12142028), (MGI:3689133|PMID:16900517)
Ensembl
RGD
PMID:12142028 PMID:16900517 GO_REF:0000107 MGI:2384365 MGI:3689133 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Dlx6 distal-less homeobox 6 ISO MGI:101926 (MGI:3689133|PMID:16900517) RGD PMID:16900517 MGI:3689133 NCBI chr 4:32,373,096...32,377,388
Ensembl chr 4:32,373,641...32,377,253
JBrowse link
G Efna2 ephrin A2 TAS RGD PMID:10792438 RGD:1300471 NCBI chr 7:12,382,636...12,393,266
Ensembl chr 7:12,382,636...12,393,266
JBrowse link
G Ephb2 Eph receptor B2 ISO (MGI:1859095|PMID:10839360) RGD PMID:10839360 MGI:1859095 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:1857803|MGI:2150426|MGI:97486 (MGI:1344210|PMID:10471511), (MGI:3577160|PMID:15817220), (MGI:3702803|PMID:16916509) RGD PMID:10471511 PMID:15817220 PMID:16916509 MGI:1344210 MGI:3577160 MGI:3702803 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:1347464|MGI:1859647 (MGI:3654570|PMID:16691564), (MGI:3688470|PMID:11062007) RGD PMID:11062007 PMID:16691564 MGI:3654570 MGI:3688470 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:1345138 (MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:3577817 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgf9 fibroblast growth factor 9 ISO MGI:2135961 (MGI:3056034|PMID:15328018) RGD PMID:15328018 MGI:3056034 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO MGI:2153351 (MGI:2386422|PMID:12194867) RGD PMID:12194867 MGI:2386422 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:2153811 (MGI:2153190|PMID:10934262) RGD PMID:10934262 MGI:2153190 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxg1 forkhead box G1 ISO MGI:1099809|MGI:2388671 (MGI:3654570|PMID:16691564) RGD PMID:16691564 MGI:3654570 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Foxi1 forkhead box I1 ISO MGI:2448634 (MGI:2652196|PMID:12642503) RGD PMID:12642503 MGI:2652196 NCBI chr10:19,160,566...19,164,505
Ensembl chr10:19,160,582...19,164,505
JBrowse link
G Frzb frizzled-related protein ISO MGI:98958 (MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:3823145 NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772
JBrowse link
G Fzd3 frizzled class receptor 3 ISO MGI:108474 (MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:3616416 NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
JBrowse link
G Fzd6 frizzled class receptor 6 ISO MGI:108476 (MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:3616416 NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:4818492 (MGI:4821520|PMID:20652952) RGD PMID:20652952 MGI:4821520 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gata3 GATA binding protein 3 ISO MGI:2153826|MGI:2181200 (MGI:1928163|PMID:11135239), (MGI:5013488|PMID:21553382) RGD PMID:11135239 PMID:21553382 MGI:1928163 MGI:5013488 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO MGI:1857634 (MGI:3578572|PMID:15829521), (MGI:3588904|PMID:15996652) RGD PMID:15829521 PMID:15996652 MGI:3578572 MGI:3588904 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:2449921 (MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:2429425 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Hmx2 H6 family homeobox 2 ISO MGI:107160|MGI:2154542 (MGI:2154463|PMID:11748138), (MGI:3055237|PMID:15363417) RGD PMID:11748138 PMID:15363417 MGI:2154463 MGI:3055237 NCBI chr 1:203,515,605...203,523,266
Ensembl chr 1:203,515,609...203,523,358
JBrowse link
G Hmx3 H6 family homeobox 3 ISO MGI:107159|MGI:1857577 (MGI:1197796|PMID:9435283), (MGI:3055237|PMID:15363417) RGD PMID:9435283 PMID:15363417 MGI:1197796 MGI:3055237 NCBI chr 1:203,509,731...203,511,695
Ensembl chr 1:203,509,731...203,511,695
JBrowse link
G Hoxa1 homeobox A1 ISO MGI:3056069 (MGI:3055618|PMID:15367676) RGD PMID:15367676 MGI:3055618 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Insig1 insulin induced gene 1 ISO MGI:1920249 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 ISO MGI:1916289 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Itga8 integrin subunit alpha 8 ISO MGI:2181699 (MGI:1355040|PMID:10742111) RGD PMID:10742111 MGI:1355040 NCBI chr17:79,321,893...79,676,927
Ensembl chr17:79,321,900...79,676,499
JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 IEA
ISO
GO_REF:0000107
MGI:3618993 (MGI:3617033|PMID:16437162)
Ensembl
RGD
PMID:16437162 GO_REF:0000107 MGI:3617033 NCBI chr 5:139,625,783...139,677,300
Ensembl chr 5:139,627,576...139,677,300
JBrowse link
G Mafb MAF bZIP transcription factor B ISO MGI:1856419 (MGI:3611672|PMID:16325169) RGD PMID:16325169 MGI:3611672 NCBI chr 3:156,338,993...156,340,913
Ensembl chr 3:156,339,004...156,340,913
JBrowse link
G Myo15a myosin XVA ISO MGI:1857036 (MGI:3041655|PMID:14724386), (MGI:3054106|PMID:11718241) RGD PMID:11718241 PMID:14724386 MGI:3041655 MGI:3054106 NCBI chr10:46,840,098...46,897,362
Ensembl chr10:46,840,113...46,896,054
JBrowse link
G Myo6 myosin VI ISO
IBA
MGI:1856555 (MGI:77423|PMID:7493015)
PMID:21873635
RGD PMID:7493015, PMID:21873635 MGI:77423, RGD:13792537 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Myo7a myosin VIIA ISO MGI:1856716|MGI:1860092|MGI:2155422|MGI:3511858 (MGI:2156358|PMID:11753415), (MGI:3510503|PMID:15389316), (MGI:53596|PMID:5795329) RGD PMID:5795329 PMID:11753415 PMID:15389316 MGI:2156358 MGI:3510503 MGI:53596 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067)
MGI:2183171 (MGI:3607238|PMID:16145671)
RGD PMID:16145671 PMID:23419067 MGI:3607238 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 ISO MGI:3037444 (MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:2157256 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Ntn1 netrin 1 IEA
ISO
GO_REF:0000107
MGI:2137018 (MGI:3718276|PMID:17616930)
Ensembl
RGD
PMID:17616930 GO_REF:0000107 MGI:3718276 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Otop1 otopetrin 1 ISO MGI:1856638|MGI:2655558 (MGI:2654297|PMID:12651873) RGD PMID:12651873 MGI:2654297 NCBI chr14:77,236,278...77,263,729
Ensembl chr14:77,236,278...77,263,729
JBrowse link
G Otx1 orthodenticle homeobox 1 IEA
ISO
GO_REF:0000107
MGI:2136272|MGI:97451 (MGI:1335816|PMID:10225993)
Ensembl
RGD
PMID:10225993 GO_REF:0000107 MGI:1335816 NCBI chr14:106,861,556...106,864,933
Ensembl chr14:106,861,676...106,864,892
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO MGI:97450 (MGI:1335816|PMID:10225993) RGD PMID:10225993 MGI:1335816 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
MGI:109344|MGI:1857673|UniProtKB:Q00288 (MGI:3052393|PMID:15242798), (MGI:3702803|PMID:16916509), (MGI:4822275|PMID:20727173), (MGI:84247|PMID:8951055)
UniProt
RGD
PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 GO_REF:0000024 MGI:3052393 MGI:3702803 MGI:4822275 MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO UniProtKB:P32114 (MGI:4822275|PMID:20727173) RGD PMID:20727173 MGI:4822275 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO MGI:1857425 (MGI:2451279|PMID:12585968) RGD PMID:12585968 MGI:2451279 NCBI chr18:36,713,869...36,716,461
Ensembl chr18:36,713,869...36,716,461
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:98218 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:97712 (MGI:1306737|PMID:9729491) RGD PMID:9729491 MGI:1306737 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q ISO MGI:2679316 (MGI:2677560|PMID:14534255) RGD PMID:14534255 MGI:2677560 NCBI chr 7:49,763,657...50,034,932
Ensembl chr 7:49,763,657...50,034,932
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 ISO MGI:2183225 (MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:3814781 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:106034 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO MGI:102780 (MGI:3578604|PMID:15788460) RGD PMID:15788460 MGI:3578604 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:4417931 (MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:4413621 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Sobp sine oculis binding protein homolog ISO MGI:1856614 (MGI:3664354|PMID:16962269) RGD PMID:16962269 MGI:3664354 NCBI chr20:47,731,713...47,910,466
Ensembl chr20:47,750,762...47,910,375
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO MGI:3578633|MGI:99604 (MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:3577817 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179136|MGI:2179190|MGI:2179191|MGI:3046196|MGI:3619149 (MGI:2671642|PMID:12913075), (MGI:3039048|PMID:15084464), (MGI:3530686|PMID:15652707), (MGI:3629255|PMID:16600992)
UniProt
RGD
PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 GO_REF:0000024 MGI:2671642 MGI:3039048 MGI:3530686 MGI:3629255 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO
ISS
(PMID:21204207)
GO_REF:0000024
RGD
UniProt
PMID:21204207 GO_REF:0000024 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
G Tmie transmembrane inner ear ISO
IBA
MGI:1857053 (MGI:2183496|PMID:12140191)
PMID:21873635
RGD PMID:12140191, PMID:21873635 MGI:2183496, RGD:13792537 NCBI chr 8:119,142,116...119,157,071
Ensembl chr 8:119,142,434...119,157,071
JBrowse link
G Ush1c USH1 protein network component harmonin ISO
IBA
MGI:2651858|MGI:2651859 (MGI:2675093|PMID:14519688)
PMID:21873635
RGD PMID:14519688, PMID:21873635 MGI:2675093, RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Ush1g USH1 protein network component sans ISO MGI:2450561 (MGI:2450572|PMID:12588793), (MGI:49706|PMID:1927362) RGD PMID:1927362 PMID:12588793 MGI:2450572 MGI:49706 NCBI chr10:103,866,566...103,873,416
Ensembl chr10:103,869,377...103,873,246
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:98956 (MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:3582112 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:98953 (MGI:3582112|PMID:15961523) RGD PMID:15961523 MGI:3582112 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:3823145|PMID:18991062) RGD PMID:18991062 MGI:3823145 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
inner ear receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8b1 ATPase phospholipid transporting 8B1 ISO (MGI:3849653|PMID:19478059) RGD PMID:19478059 MGI:3849653 NCBI chr18:60,013,388...60,152,920
Ensembl chr18:60,013,382...60,095,354
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:3589208 (MGI:3844748|PMID:19416898) RGD PMID:19416898 MGI:3844748 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Fzd2 frizzled class receptor 2 IEA
ISO
GO_REF:0000107
MGI:2135272 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:112,833,941...112,947,482
Ensembl chr 1:112,833,944...112,947,451
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr10:27,973,694...28,193,072
Ensembl chr10:27,973,681...28,187,565
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 ISO (MGI:3664129|PMID:17021187) RGD PMID:17021187 MGI:3664129 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO (MGI:3512691|PMID:11276175) RGD PMID:11276175 MGI:3512691 NCBI chr14:41,663,688...41,787,331
Ensembl chr14:41,663,688...41,786,084
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase ISO MGI:1934018 (MGI:3769195|PMID:17712420) RGD PMID:17712420 MGI:3769195 NCBI chr10:88,979,363...88,986,879
Ensembl chr10:88,979,383...88,986,867
JBrowse link
G Tshr-ps1 thyroid stimulating hormone receptor, pseudogene 1 ISO MGI:1856914 (MGI:3652455|PMID:10575115) RGD PMID:10575115 MGI:3652455 NCBI chr 4:93,447,412...93,448,194 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:1888513 (MGI:4837757|PMID:20940229) RGD PMID:20940229 MGI:4837757 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
inner ear receptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:1856799 (MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:3709803 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:95524 (MGI:3714221|PMID:17555714)
Ensembl
RGD<