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ONTOLOGY REPORT - ANNOTATIONS


Term:brain development
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Accession:GO:0007420 term browser browse the term
Definition:The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).


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Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:22573681) MGI PMID:22573681 NCBI chrNW_004624801:10,173,722...10,209,202
Ensembl chrNW_004624801:10,175,994...10,209,192
JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,797,897...5,805,055
Ensembl chrNW_004624823:5,797,943...5,808,448
JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004624786:3,121,282...3,319,804
Ensembl chrNW_004624786:3,174,989...3,319,804
JBrowse link
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:20147288 RGD:405855864 NCBI chrNW_004624740:16,275,108...16,280,639
Ensembl chrNW_004624740:16,275,117...16,281,793
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:28,439,855...28,476,551
Ensembl chrNW_004624746:28,436,895...28,476,926
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) UniProt PMID:26299366 NCBI chrNW_004624777:3,342,437...3,710,544
Ensembl chrNW_004624777:3,342,271...3,639,118
JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chrNW_004624734:6,942,786...7,000,453
Ensembl chrNW_004624734:6,942,374...7,001,212
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:17487225) MGI PMID:17487225 NCBI chrNW_004624738:11,094,699...12,010,349
Ensembl chrNW_004624738:11,095,134...11,288,891
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:5,184,423...5,189,691
Ensembl chrNW_004624816:5,184,536...5,187,659
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) UniProt PMID:34942119 NCBI chrNW_004624747:21,473,337...21,501,348
Ensembl chrNW_004624747:21,473,352...21,499,843
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO (PMID:9753321) MGI PMID:9753321 NCBI chrNW_004624750:8,835,521...8,940,957
Ensembl chrNW_004624750:8,837,037...8,938,009
JBrowse link
G Apod apolipoprotein D involved_in ISS
IEA
UniProt
InterPro
GO_REF:0000002 GO_REF:0000024 NCBI chrNW_004624730:62,535,005...62,552,405
Ensembl chrNW_004624730:62,530,673...62,555,129
JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chrNW_004624789:10,223,339...10,252,889
Ensembl chrNW_004624789:10,229,793...10,254,364
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:24022475) UniProt PMID:24022475 NCBI chrNW_004624768:21,166,554...21,319,462
Ensembl chrNW_004624768:21,166,554...21,319,594
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) MGI PMID:20823249 NCBI chrNW_004624798:3,164,145...3,223,810
Ensembl chrNW_004624798:3,165,393...3,225,181
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:12223565) MGI PMID:12223565 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
G Atxn1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004624756:9,770,261...10,167,560
Ensembl chrNW_004624756:10,011,250...10,160,469
JBrowse link
G Atxn1l ataxin 1 like involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004624746:14,119,413...14,130,622
Ensembl chrNW_004624746:14,119,440...14,130,429
JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chrNW_004624776:6,823,388...6,954,114
Ensembl chrNW_004624776:6,825,204...6,922,791
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chrNW_004624892:3,260,008...3,270,464
Ensembl chrNW_004624892:3,259,819...3,270,464
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chrNW_004624754:24,559,483...24,571,073
Ensembl chrNW_004624754:24,559,801...24,571,073
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22228099) Ensembl
MGI
PMID:22228099 GO_REF:0000107 NCBI chrNW_004624777:2,105,122...2,151,399
Ensembl chrNW_004624777:2,104,765...2,151,402
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004624747:9,528,968...9,664,055
Ensembl chrNW_004624747:9,528,996...9,662,131
JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO (PMID:24074871)
(MGI:5544381|PMID:24074871)
UniProt PMID:24074871 MGI:5544381 NCBI chrNW_004624885:1,526,625...1,528,235
Ensembl chrNW_004624885:1,527,538...1,528,109
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (PMID:7926765) MGI PMID:7926765 NCBI chrNW_004624796:6,277,201...6,282,830
Ensembl chrNW_004624796:6,274,561...6,282,984
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) HGNC-UCL PMID:14609955 NCBI chrNW_004624870:489,359...626,677
Ensembl chrNW_004624870:487,955...626,683
JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chrNW_004624776:5,497,552...5,573,465
Ensembl chrNW_004624776:5,497,779...5,550,993
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5770105|PMID:27042284) UniProt PMID:27042284 MGI:5770105 NCBI chrNW_004624760:15,902,890...16,071,513
Ensembl chrNW_004624760:15,902,858...16,075,104
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004624817:2,880,775...3,060,399
Ensembl chrNW_004624817:2,880,976...3,042,004
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in ISO (MGI:6739960|PMID:34298015) UniProt PMID:34298015 MGI:6739960 NCBI chrNW_004624844:785,097...1,010,155
Ensembl chrNW_004624844:784,029...1,004,008
JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:29317443) MGI PMID:29317443 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799
JBrowse link
G Cdh2 cadherin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in ISO (MGI:4454588|PMID:20460369) UniProt PMID:20460369 MGI:4454588 NCBI chrNW_004624760:14,736,273...14,930,168
Ensembl chrNW_004624760:14,736,104...14,930,119
JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO (PMID:15248193) MGI PMID:15248193 NCBI chrNW_004624908:1,937,007...1,949,780
Ensembl chrNW_004624908:1,941,393...1,949,760
JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) MGI PMID:31004071 NCBI chrNW_004624831:3,231,854...3,336,184 JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27602517) Ensembl
MGI
PMID:27602517 GO_REF:0000107 NCBI chrNW_004624825:7,411,629...7,475,111
Ensembl chrNW_004624825:7,411,629...7,474,526
JBrowse link
G Cic capicua transcriptional repressor involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004624907:458,447...486,482
Ensembl chrNW_004624907:454,948...486,565
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (MGI:3693257|PMID:17047318) UniProt PMID:17047318 MGI:3693257 NCBI chrNW_004624903:2,596,049...2,601,315 JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in ISO (PMID:10992246) UniProt PMID:10992246 NCBI chrNW_004624751:23,395,284...23,404,798
Ensembl chrNW_004624751:23,396,789...23,404,906
JBrowse link
G Cntn1 contactin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624917:292,404...752,017
Ensembl chrNW_004624917:471,837...750,245
JBrowse link
G Cntn2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Cntn4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chrNW_004624773:12,331,286...13,302,770
Ensembl chrNW_004624773:12,780,223...13,302,873
JBrowse link
G Cntn6 contactin 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:11,059,466...11,417,825
Ensembl chrNW_004624773:11,059,333...11,417,733
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) BHF-UCL PMID:16107487 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:6,296,975...6,318,266
Ensembl chrNW_004624786:6,298,243...6,317,743
JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chrNW_004624761:17,908,703...18,014,539
Ensembl chrNW_004624761:17,945,350...18,014,246
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:5287328|PMID:21778362) UniProt PMID:21778362 MGI:5287328 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chrNW_004624922:1,261,228...1,273,755
Ensembl chrNW_004624922:1,261,228...1,273,758
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12183377) TreeGrafter
MGI
PMID:12183377 GO_REF:0000118 NCBI chrNW_004624732:35,473,740...35,477,482
Ensembl chrNW_004624732:35,472,760...35,477,528
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624776:1,299,691...1,679,888
Ensembl chrNW_004624776:1,301,762...1,676,835
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624803:4,168,556...4,304,642
Ensembl chrNW_004624803:4,168,556...4,299,979
JBrowse link
G Ddit4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chrNW_004624754:6,091,914...6,094,035
Ensembl chrNW_004624754:6,091,809...6,094,525
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:31256877) UniProt PMID:31256877 NCBI chrNW_004624747:24,054,577...24,075,011
Ensembl chrNW_004624747:24,055,707...24,074,919
JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chrNW_004624774:738,717...845,187
Ensembl chrNW_004624774:739,206...845,272
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:3054504|PMID:15314164) UniProt PMID:15314164 MGI:3054504 NCBI chrNW_004624906:2,396,426...2,402,705
Ensembl chrNW_004624906:2,396,435...2,401,379
JBrowse link
G Dmxl2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624731:8,702,288...8,843,807
Ensembl chrNW_004624731:8,702,137...8,842,653
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:14,131,362...14,133,580 JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO (PMID:12051741) UniProt PMID:12051741 NCBI chrNW_004624784:12,853,870...13,183,224
Ensembl chrNW_004624784:12,854,420...13,183,132
JBrowse link
G Eml1 EMAP like 1 involved_in ISO (MGI:5574528|PMID:24859200)
(PMID:24859200)
UniProt PMID:24859200 MGI:5574528 NCBI chrNW_004624734:4,090,077...4,150,706
Ensembl chrNW_004624734:4,089,986...4,236,776
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12091317)
(PMID:12561075)
MGI PMID:12091317 PMID:12561075 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:12091317)
(PMID:12196586), (PMID:12209834), (PMID:12561075)
MGI PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 NCBI chrNW_004624737:29,103,378...29,110,356
Ensembl chrNW_004624737:29,103,279...29,110,344
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:17353897) UniProt PMID:17353897 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Epha7 EPH receptor A7 involved_in ISO (MGI:3582020|PMID:15902206) UniProt PMID:15902206 MGI:3582020 NCBI chrNW_004624799:560,441...753,509
Ensembl chrNW_004624799:560,432...754,132
JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11807041) MGI
Ensembl
PMID:11807041 GO_REF:0000107 NCBI chrNW_004624828:3,181,772...3,187,242
Ensembl chrNW_004624828:3,181,957...3,187,231
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (PMID:14605369) MGI PMID:14605369 NCBI chrNW_004624763:16,126,582...16,393,476
Ensembl chrNW_004624763:16,126,938...16,392,804
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:12682014) MGI PMID:12682014 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:23591631)
(PMID:20675713)
(PMID:26306834)
MGI PMID:20675713 PMID:23591631 PMID:26306834 NCBI chrNW_004624832:6,849,001...6,858,931
Ensembl chrNW_004624832:6,849,005...6,857,898
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004624758:5,750,804...5,877,797
Ensembl chrNW_004624758:5,792,514...5,877,709
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chrNW_004624734:26,033,790...26,085,027
Ensembl chrNW_004624734:26,033,790...26,085,014
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:9635428)
(PMID:4784576), (PMID:5500588)
MGI PMID:4784576 PMID:5500588 PMID:9635428 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343
JBrowse link
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486
JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chrNW_004624784:14,369,372...14,382,191
Ensembl chrNW_004624784:14,369,166...14,383,902
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625
JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chrNW_004624746:29,776...44,825
Ensembl chrNW_004624746:29,776...44,741
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910
JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624747:10,518,651...10,580,179
Ensembl chrNW_004624747:10,518,671...10,580,179
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:12435361), (PMID:17395647)
(PMID:8026071)
MGI PMID:8026071 PMID:12435361 PMID:17395647 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in ISO (PMID:28851741) UniProt PMID:28851741 NCBI chrNW_004624796:3,299,535...3,806,346
Ensembl chrNW_004624796:3,302,496...3,806,219
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within ISO (PMID:21377456) MGI PMID:21377456 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO (PMID:12930780) MGI PMID:12930780 NCBI chrNW_004624761:15,387,217...15,389,404
Ensembl chrNW_004624761:15,387,674...15,389,229
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624781:8,694,044...8,907,701
Ensembl chrNW_004624781:8,745,780...8,907,701
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:11291863) MGI PMID:11291863 NCBI chrNW_004624822:74,344...102,484
Ensembl chrNW_004624822:74,373...101,828
JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15363417) MGI
Ensembl
PMID:15363417 GO_REF:0000107 NCBI chrNW_004624737:23,862,661...23,871,723
Ensembl chrNW_004624737:23,861,756...23,871,804
JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO (PMID:15363417) MGI PMID:15363417 NCBI chrNW_004624737:23,873,168...23,878,302
Ensembl chrNW_004624737:23,875,936...23,877,765
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chrNW_004624826:1,260,133...1,287,565
Ensembl chrNW_004624826:1,260,223...1,283,741
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chrNW_004624764:6,639,152...6,736,161
Ensembl chrNW_004624764:6,640,087...6,708,130
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333
JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chrNW_004624746:12,997,012...13,417,034 JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) UniProt PMID:33122427 NCBI chrNW_004624778:10,707,363...10,724,822
Ensembl chrNW_004624778:10,705,916...10,739,006
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:22228099)
(PMID:19036983)
MGI PMID:19036983 PMID:22228099 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337
JBrowse link
G Igf1r insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chrNW_004624739:18,264,690...19,194,634
Ensembl chrNW_004624739:18,323,816...19,194,466
JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004624793:2,615,092...2,636,835
Ensembl chrNW_004624793:2,614,589...2,636,947
JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23906841) TreeGrafter
MGI
PMID:23906841 GO_REF:0000118 NCBI chrNW_004624880:2,150,517...2,218,212
Ensembl chrNW_004624880:2,150,314...2,216,660
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:1,915,108...1,923,071
Ensembl chrNW_004624860:1,915,344...1,923,062
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chrNW_004624741:29,089,894...29,143,681
Ensembl chrNW_004624741:29,091,119...29,143,589
JBrowse link
G Kdm4b lysine demethylase 4B involved_in ISO (MGI:6101669|PMID:27023172) UniProt PMID:27023172 MGI:6101669 NCBI chrNW_004624828:4,796,306...4,893,093
Ensembl chrNW_004624828:4,796,972...4,864,638
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624807:9,633,009...9,681,228
Ensembl chrNW_004624807:9,633,281...9,677,260
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:26306834), (PMID:29360985)
(PMID:29360985)
MGI PMID:26306834 PMID:29360985 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:14566948), (PMID:15295034) MGI PMID:14566948 PMID:15295034 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G LOC101712013 core histone macro-H2A.2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:4,227,897...4,276,595
Ensembl chrNW_004624754:4,227,644...4,279,077
JBrowse link
G Maco1 macoilin 1 involved_in ISO (MGI:3052424|PMID:15255972) BHF-UCL PMID:15255972 MGI:3052424 NCBI chrNW_004624764:9,569,419...9,633,589
Ensembl chrNW_004624764:9,568,909...9,633,589
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (MGI:4887328|PMID:17586838) UniProt PMID:17586838 MGI:4887328 NCBI chrNW_004624741:14,998,007...17,256,372
Ensembl chrNW_004624741:14,998,305...17,252,759
JBrowse link
G Map1s microtubule associated protein 1S involved_in ISO (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chrNW_004624908:400,765...408,154
Ensembl chrNW_004624908:400,577...408,129
JBrowse link
G Mast1 microtubule associated serine/threonine kinase 1 involved_in ISO (PMID:30449657)
(MGI:6269299|PMID:30449657)
UniProt PMID:30449657 MGI:6269299 NCBI chrNW_004624901:429,191...463,534
Ensembl chrNW_004624901:432,836...467,161
JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISO (MGI:7285999|PMID:35482892) UniProt PMID:35482892 MGI:7285999 NCBI chrNW_004624746:19,133,871...19,141,587
Ensembl chrNW_004624746:19,134,377...19,141,462
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:10882104) MGI PMID:10882104 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126
JBrowse link
G Meis1 Meis homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:6,894,332...7,031,354
Ensembl chrNW_004624762:6,873,913...7,031,346
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chrNW_004624827:2,589,157...2,724,065
Ensembl chrNW_004624827:2,587,966...2,723,995
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (PMID:26005865), (PMID:26005868)
(MGI:6196220|PMID:30074985)
ARUK-UCL PMID:26005865 PMID:26005868 PMID:30074985 MGI:6196220 NCBI chrNW_004624764:22,422,520...22,435,332
Ensembl chrNW_004624764:22,422,423...22,435,416
JBrowse link
G Mink1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chrNW_004624786:8,711,388...8,764,102
Ensembl chrNW_004624786:8,711,263...8,763,343
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Napa NSF attachment protein alpha acts_upstream_of_or_within ISO (PMID:11706940) MGI PMID:11706940 NCBI chrNW_004624832:6,301,251...6,323,445 JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chrNW_004624842:4,570,758...4,665,517 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within
involved_in
ISO (PMID:28916769)
(PMID:14765537)
MGI
UniProt
PMID:14765537 PMID:28916769 NCBI chrNW_004624759:5,630,522...5,733,928 JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chrNW_004624742:24,054,340...24,881,716
Ensembl chrNW_004624742:24,054,701...24,877,957
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (PMID:23863479) MGI PMID:23863479 NCBI chrNW_004624747:5,923,827...6,011,276
Ensembl chrNW_004624747:5,923,834...6,011,939
JBrowse link
G Nfasc neurofascin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:6,097,507...6,260,880
Ensembl chrNW_004624807:6,103,524...6,226,583
JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:30388402) UniProt PMID:30388402 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:17,899,152...18,078,213
Ensembl chrNW_004624759:17,899,152...17,999,295
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within
involved_in
ISO (PMID:8557195)
(PMID:12930780)
(PMID:11971878)
MGI
UniProt
PMID:8557195 PMID:11971878 PMID:12930780 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997
JBrowse link
G Nnat neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624842:2,122,968...2,125,490 JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:12397106) MGI PMID:12397106 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:14994267) MGI PMID:14994267 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:21,308,457...21,633,627 JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chrNW_004624860:2,416,448...2,479,216
Ensembl chrNW_004624860:2,416,503...2,479,225
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31383820) Ensembl
MGI
PMID:31383820 GO_REF:0000107 NCBI chrNW_004624828:3,207,935...3,218,795
Ensembl chrNW_004624828:3,208,153...3,218,637
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:27486780) MGI PMID:27486780 NCBI chrNW_004624795:1,861,985...1,876,766
Ensembl chrNW_004624795:1,861,991...1,876,737
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10409504), (PMID:12196586) Ensembl
MGI
PMID:10409504 PMID:12196586 GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G Pbx3 PBX homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:9,352,759...9,555,211
Ensembl chrNW_004624760:9,352,563...9,553,984
JBrowse link
G Pcdh18 protocadherin 18 involved_in ISO (MGI:2154581|PMID:11716507) UniProt PMID:11716507 MGI:2154581 NCBI chrNW_004624777:17,969,958...17,982,099
Ensembl chrNW_004624777:17,969,214...17,982,153
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) UniProt PMID:17554007 MGI:3712712 NCBI chrNW_004624752:473,451...498,555
Ensembl chrNW_004624752:469,973...498,729
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834) Ensembl
MGI
PMID:26306834 GO_REF:0000107 NCBI chrNW_004624906:2,120,759...2,131,024
Ensembl chrNW_004624906:2,119,684...2,135,656
JBrowse link
G Pomk protein O-mannose kinase acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624992:196,792...222,638
Ensembl chrNW_004624992:196,645...218,123
JBrowse link
G Pou3f4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624852:5,036,585...5,040,160
Ensembl chrNW_004624852:5,037,373...5,040,139
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:22,542,892...22,577,077
Ensembl chrNW_004624764:22,543,857...22,577,121
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:9153393) MGI PMID:9153393 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chrNW_004624753:16,929,503...16,995,255
Ensembl chrNW_004624753:16,935,251...16,995,389
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670
JBrowse link
G Pygo2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17425782) Ensembl
MGI
PMID:17425782 GO_REF:0000107 NCBI chrNW_004624885:2,521,230...2,525,449
Ensembl chrNW_004624885:2,521,368...2,525,449
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO (PMID:24656866) UniProt PMID:24656866 NCBI chrNW_004624730:3,123,877...3,130,787
Ensembl chrNW_004624730:3,120,958...3,130,757
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) BHF-UCL PMID:20512159 NCBI chrNW_004624732:34,450,616...34,593,675
Ensembl chrNW_004624732:34,450,630...34,593,675
JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within ISO (PMID:15789424) MGI PMID:15789424 NCBI chrNW_004624792:4,652,430...4,657,048
Ensembl chrNW_004624792:4,652,493...4,656,826
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (PMID:12223565) MGI PMID:12223565 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chrNW_004624745:800,963...2,121,445
Ensembl chrNW_004624745:804,797...1,390,551
JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:38172607) MGI
Ensembl
PMID:38172607 GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904), (PMID:17558409) MGI PMID:17553904 PMID:17558409 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115
JBrowse link
G Rtn1 reticulon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:41,274,072...41,529,134
Ensembl chrNW_004624734:41,274,546...41,530,090
JBrowse link
G Rtn4 reticulon 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16314531) MGI
Ensembl
PMID:16314531 GO_REF:0000107 NCBI chrNW_004624857:4,143,269...4,147,877
Ensembl chrNW_004624857:4,143,270...4,147,877
JBrowse link
G Sct secretin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:21,841,994...21,842,754
Ensembl chrNW_004624766:21,842,014...21,842,683
JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chrNW_004624750:7,412,869...7,477,965 JBrowse link
G Selenop selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chrNW_004624759:12,207,251...12,218,857 JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chrNW_004624871:330,225...402,327 JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in ISO (MGI:6467717|PMID:31197650)
(PMID:31197650)
UniProt PMID:31197650 MGI:6467717 NCBI chrNW_004624782:14,030,425...14,053,679 JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) UniProt PMID:16249884 NCBI chrNW_004624893:2,373,847...2,660,122
Ensembl chrNW_004624893:2,373,815...2,660,199
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12569128) MGI PMID:12569128 NCBI chrNW_004624738:26,379,172...26,391,669
Ensembl chrNW_004624738:26,380,088...26,394,252
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485
JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:32,169,051...32,186,618
Ensembl chrNW_004624743:32,174,922...32,186,697
JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:5,910,899...5,958,855
Ensembl chrNW_004624772:5,910,897...5,958,845
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17035536) MGI PMID:17035536 NCBI chrNW_004624777:18,540,006...18,619,881
Ensembl chrNW_004624777:18,546,799...18,619,947
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
(PMID:22516202)
HGNC-UCL
MGI
PMID:14609955 PMID:22516202 NCBI chrNW_004624797:8,627,048...8,710,540
Ensembl chrNW_004624797:8,626,742...8,710,845
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:1,237,658...1,255,589
Ensembl chrNW_004624907:1,237,451...1,255,586
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO (PMID:32442410) UniProt PMID:32442410 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764
JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207
JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624823:6,359,868...6,383,777
Ensembl chrNW_004624823:6,360,242...6,383,035
JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15690082) Ensembl
MGI
PMID:15690082 GO_REF:0000107 NCBI chrNW_004624772:4,540,518...4,589,562
Ensembl chrNW_004624772:4,540,450...4,589,896
JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chrNW_004624892:2,041,763...2,046,440
Ensembl chrNW_004624892:2,042,071...2,046,026
JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624789:13,685,458...13,749,820
Ensembl chrNW_004624789:13,685,089...13,753,046
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959
JBrowse link
G Tmx2 thioredoxin related transmembrane protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624864:3,016,499...3,020,762
Ensembl chrNW_004624864:3,016,499...3,020,755
JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) UniProt PMID:31630790 NCBI chrNW_004624737:13,436,046...13,459,101 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chrNW_004624860:232,838...301,299
Ensembl chrNW_004624860:232,936...299,225
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chrNW_004624794:223,730...243,519
Ensembl chrNW_004624794:223,730...243,199
JBrowse link
G Ufm1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chrNW_004624920:1,318,468...1,477,045
Ensembl chrNW_004624920:1,318,511...1,329,839
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:9,564,500...9,619,899
Ensembl chrNW_004624762:9,564,498...9,619,040
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chrNW_004624730:77,495,705...77,876,547
Ensembl chrNW_004624730:77,495,747...77,875,622
JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within ISO (PMID:10818148)
(PMID:9126743)
(PMID:1401878), (PMID:9550145)
MGI PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 NCBI chrNW_004624757:23,145,200...23,537,812
Ensembl chrNW_004624757:23,151,485...23,537,706
JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chrNW_004624895:3,762,087...3,781,662 JBrowse link
G Utp3 UTP3 small subunit processome component involved_in ISO (MGI:2136064|PMID:11404095) UniProt PMID:11404095 MGI:2136064 NCBI chrNW_004624890:2,022,601...2,024,679
Ensembl chrNW_004624890:2,022,764...2,024,173
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601036)
(PMID:10601035)
MGI PMID:10601035 PMID:10601036 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chrNW_004624763:6,101,943...6,866,457
Ensembl chrNW_004624763:6,102,674...6,864,817
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624772:4,749,748...4,821,490
Ensembl chrNW_004624772:4,750,931...4,806,717
JBrowse link
G Zic1 Zic family member 1 involved_in ISO (MGI:78770|PMID:7931345)
(PMID:8542595)
UniProt PMID:7931345 PMID:8542595 MGI:78770 NCBI chrNW_004624730:24,440,717...24,444,663
Ensembl chrNW_004624730:24,440,192...24,448,421
JBrowse link
G Znf335 zinc finger protein 335 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:8,624,316...8,646,712
Ensembl chrNW_004624790:8,625,150...8,647,441
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:21533046) MGI PMID:21533046 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:9140068) MGI PMID:9140068 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within ISO (PMID:15985453) MGI PMID:15985453 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO (PMID:1270792), (PMID:1329576), (PMID:1504465) MGI PMID:1270792 PMID:1329576 PMID:1504465 NCBI chrNW_004624783:200,935...214,453
Ensembl chrNW_004624783:200,940...214,373
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO (PMID:8631293) MGI PMID:8631293 NCBI chrNW_004624776:10,704,726...10,707,108
Ensembl chrNW_004624776:10,705,843...10,707,093
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chrNW_004624789:3,589,863...3,605,655
Ensembl chrNW_004624789:3,592,214...3,605,537
JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chrNW_004624733:41,852,638...41,856,493
Ensembl chrNW_004624733:41,850,474...41,856,459
JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO (PMID:9247269) MGI PMID:9247269 NCBI chrNW_004624751:694,165...720,287
Ensembl chrNW_004624751:694,099...719,465
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chrNW_004624731:14,121,855...14,139,344
Ensembl chrNW_004624731:14,122,608...14,138,121
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) CACAO PMID:18778775 MGI:3821675 NCBI chrNW_004624934:1,145,982...1,220,177
Ensembl chrNW_004624934:1,146,000...1,215,922
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:12527005) MGI PMID:12527005 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:24441682) MGI PMID:24441682 NCBI chrNW_004624732:4,043,867...4,052,621
Ensembl chrNW_004624732:4,043,867...4,052,551
JBrowse link
G Uba6 ubiquitin like modifier activating enzyme 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23499007) MGI
Ensembl
PMID:23499007 GO_REF:0000107 NCBI chrNW_004624761:1,262,172...1,351,606
Ensembl chrNW_004624761:1,262,345...1,349,964
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) UniProt PMID:23206892 MGI:5467661 NCBI chrNW_004624818:1,253,968...1,274,418
Ensembl chrNW_004624818:1,256,169...1,263,904
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO (PMID:19398581) MGI PMID:19398581 NCBI chrNW_004624730:61,667,177...61,684,162 JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:11997145) MGI PMID:11997145 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chrNW_004624783:3,831,320...4,292,594
Ensembl chrNW_004624783:3,658,835...4,285,638
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
ISO (MGI:5467661|PMID:23206892)
(PMID:21055390)
UniProt
MGI
PMID:21055390 PMID:23206892 MGI:5467661 NCBI chrNW_004624817:364,543...379,742
Ensembl chrNW_004624817:366,101...373,034
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624772:4,749,748...4,821,490
Ensembl chrNW_004624772:4,750,931...4,806,717
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Akt3 AKT serine/threonine kinase 3 acts_upstream_of_or_within ISO (PMID:15713641) MGI PMID:15713641 NCBI chrNW_004624771:15,639,018...15,896,590
Ensembl chrNW_004624771:15,648,638...15,896,590
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chrNW_004624757:55,861...88,703
Ensembl chrNW_004624757:55,811...88,562
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624781:1,502,069...1,553,101
Ensembl chrNW_004624781:1,503,816...1,538,755
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583) Ensembl
MGI
PMID:25100583 GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:25100583)
(PMID:23178126)
MGI PMID:23178126 PMID:25100583 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chrNW_004624753:16,566,864...16,811,438 JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004624731:4,577,663...4,671,086
Ensembl chrNW_004624731:4,611,963...4,671,765
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624741:11,323,935...11,447,669
Ensembl chrNW_004624741:11,425,368...11,435,706
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004624745:31,402,791...31,516,522
Ensembl chrNW_004624745:31,403,014...31,515,751
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004624771:17,183,538...17,205,460
Ensembl chrNW_004624771:17,183,447...17,224,188
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (PMID:18165320) MGI PMID:18165320 NCBI chrNW_004624732:3,541,525...3,849,805
Ensembl chrNW_004624732:3,540,954...3,849,863
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:2,673,285...2,711,432
Ensembl chrNW_004624786:2,672,552...2,710,914
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chrNW_004624759:19,135,629...19,298,966 JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:21,291,728...21,307,550
Ensembl chrNW_004624767:21,291,728...21,307,728
JBrowse link
G Znf335 zinc finger protein 335 acts_upstream_of_or_within ISO (PMID:23178126) MGI PMID:23178126 NCBI chrNW_004624790:8,624,316...8,646,712
Ensembl chrNW_004624790:8,625,150...8,647,441
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO (PMID:7903221) MGI PMID:7903221 NCBI chrNW_004624791:953,009...959,656
Ensembl chrNW_004624791:955,161...959,791
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO (PMID:9367425) MGI PMID:9367425 NCBI chrNW_004624739:3,501,671...3,504,939
Ensembl chrNW_004624739:3,501,817...3,504,750
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO (PMID:7925021) MGI PMID:7925021 NCBI chrNW_004624919:1,337,269...1,340,607
Ensembl chrNW_004624919:1,339,228...1,340,208
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:15548218) MGI PMID:15548218 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO (PMID:11872605) UniProt PMID:11872605 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854
JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chrNW_004624961:147,685...155,614
Ensembl chrNW_004624961:143,358...154,003
JBrowse link
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Phox2b paired like homeobox 2B acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004624761:25,234,048...25,238,725
Ensembl chrNW_004624761:25,234,372...25,237,102
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:12,182,728...12,185,228
Ensembl chrNW_004624781:12,183,444...12,185,185
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chrNW_004624772:11,609,825...11,614,937
Ensembl chrNW_004624772:11,611,342...11,613,835
JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272) MGI PMID:8955272 NCBI chrNW_004624751:21,812,567...21,817,837
Ensembl chrNW_004624751:21,812,850...21,814,747
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chrNW_004624749:2,737,251...2,747,540
Ensembl chrNW_004624749:2,737,251...2,745,979
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) MGI PMID:25099998 NCBI chrNW_004624782:75,141...184,590
Ensembl chrNW_004624782:75,066...184,590
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chrNW_004624760:13,472,500...13,658,070
Ensembl chrNW_004624760:13,472,672...13,657,930
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10970885) MGI PMID:10970885 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725) MGI PMID:15677725 NCBI chrNW_004624897:1,279,138...1,303,210 JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004624775:17,820,590...18,165,640
Ensembl chrNW_004624775:17,831,272...18,165,668
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004624784:7,093,457...7,178,448
Ensembl chrNW_004624784:7,094,736...7,175,072
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:10729342) MGI PMID:10729342 NCBI chrNW_004624737:29,103,378...29,110,356
Ensembl chrNW_004624737:29,103,279...29,110,344
JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chrNW_004624798:8,426,819...8,430,949
Ensembl chrNW_004624798:8,426,825...8,430,939
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:16613831) MGI PMID:16613831 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
G Lhx5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10325223) Ensembl
MGI
PMID:10325223 GO_REF:0000107 NCBI chrNW_004624747:19,088,372...19,097,406
Ensembl chrNW_004624747:19,088,311...19,097,080
JBrowse link
G Ncor2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chrNW_004624747:23,777,645...23,887,804
Ensembl chrNW_004624747:23,777,325...23,865,804
JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chrNW_004624817:5,523,648...5,568,997
Ensembl chrNW_004624817:5,523,665...5,568,994
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chrNW_004624738:26,379,172...26,391,669
Ensembl chrNW_004624738:26,380,088...26,394,252
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chrNW_004624832:6,413,169...6,423,394
Ensembl chrNW_004624832:6,414,587...6,423,394
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chrNW_004624758:23,147,512...23,240,711
Ensembl chrNW_004624758:23,147,452...23,230,879
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chrNW_004624763:19,861,837...19,888,626 JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874)
(MGI:4461115|PMID:20018874)
ParkinsonsUK-UCL
CACAO
PMID:20018874 MGI:4461115 NCBI chrNW_004624827:2,045,733...2,088,284
Ensembl chrNW_004624827:2,045,595...2,089,442
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO (PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
UniProt PMID:24766809 PMID:24766810 MGI:5568133 NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051
JBrowse link
G Dixdc1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chrNW_004624784:7,093,457...7,178,448
Ensembl chrNW_004624784:7,094,736...7,175,072
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:20798045) MGI PMID:20798045 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004624758:5,750,804...5,877,797
Ensembl chrNW_004624758:5,792,514...5,877,709
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chrNW_004624766:11,056,877...11,417,291
Ensembl chrNW_004624766:11,170,921...11,414,050
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISO (MGI:3621523|PMID:16504944) UniProt PMID:16504944 MGI:3621523 NCBI chrNW_004624795:3,453,525...3,457,618
Ensembl chrNW_004624795:3,453,591...3,457,625
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chrNW_004624740:7,481,719...7,549,809
Ensembl chrNW_004624740:7,482,314...7,549,417
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10407039) Ensembl
MGI
PMID:10407039 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chrNW_004624747:569,127...588,479
Ensembl chrNW_004624747:581,832...588,333
JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452
JBrowse link
G LOC101715424 tubulin alpha-1B chain-like involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004624745:31,402,791...31,516,522
Ensembl chrNW_004624745:31,403,014...31,515,751
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Trnp1 TMF1 regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chrNW_004624764:10,957,840...10,964,647
Ensembl chrNW_004624764:10,958,425...10,964,647
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004624804:9,841,401...10,002,592
Ensembl chrNW_004624804:9,848,512...10,002,693
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) TreeGrafter
MGI
Ensembl
PMID:20153830 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:21,718,023...21,720,907
Ensembl chrNW_004624766:21,718,169...21,720,907
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:17409116) MGI PMID:17409116 NCBI chrNW_004624823:1,261,458...1,326,261
Ensembl chrNW_004624823:1,261,406...1,326,917
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) MGI PMID:17984326 NCBI chrNW_004624737:13,516,881...13,577,795
Ensembl chrNW_004624737:13,518,818...13,577,762
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004624765:16,182,691...16,218,634
Ensembl chrNW_004624765:16,181,809...16,218,720
JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:23042739)
(PMID:21800304)
MGI PMID:21800304 PMID:23042739 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004624891:1,907,233...2,429,714
Ensembl chrNW_004624891:1,908,044...2,425,144
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chrNW_004624747:27,680,994...27,697,342
Ensembl chrNW_004624747:27,681,033...27,695,966
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) MGI PMID:9405095 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in ISO (MGI:5689090|PMID:22095825) UniProt PMID:22095825 MGI:5689090 NCBI chrNW_004624832:4,400,586...4,405,203
Ensembl chrNW_004624832:4,396,604...4,405,185
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004624777:3,268,674...3,321,424
Ensembl chrNW_004624777:3,268,953...3,321,145
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chrNW_004624847:1,878,946...1,881,794
Ensembl chrNW_004624847:1,879,007...1,881,669
JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO (PMID:20498273) MGI PMID:20498273 NCBI chrNW_004624745:24,850,386...24,859,669
Ensembl chrNW_004624745:24,850,366...24,859,663
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chrNW_004624818:3,255,835...3,648,634
Ensembl chrNW_004624818:3,388,149...3,648,634
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:2683830|PMID:14687547) UniProt PMID:14687547 MGI:2683830 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
ISO (MGI:2683830|PMID:14687547)
(PMID:10027293)
(MGI:5689090|PMID:22095825)
UniProt
MGI
PMID:10027293 PMID:14687547 PMID:22095825 MGI:2683830 MGI:5689090 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Znf423 zinc finger protein 423 acts_upstream_of_or_within ISO (PMID:27727273) MGI PMID:27727273 NCBI chrNW_004624757:6,742,289...7,060,907
Ensembl chrNW_004624757:6,742,132...7,061,058
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO (PMID:18327254) MGI PMID:18327254 NCBI chrNW_004624807:3,643,283...3,829,817
Ensembl chrNW_004624807:3,643,255...3,834,128
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004624804:9,841,401...10,002,592
Ensembl chrNW_004624804:9,848,512...10,002,693
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624791:1,330,869...1,355,248
Ensembl chrNW_004624791:1,330,794...1,470,973
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004624945:734,532...767,184
Ensembl chrNW_004624945:734,532...767,168
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004624737:27,736,167...27,738,664
Ensembl chrNW_004624737:27,737,735...27,738,568
JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004624794:12,677,695...12,724,595
Ensembl chrNW_004624794:12,686,543...12,719,695
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within
involved_in
ISO (PMID:30420556)
(PMID:10630211)
(MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048)
MGI
UniProt
PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 MGI:2159417 MGI:3614720 MGI:4849873 NCBI chrNW_004624809:9,119,412...9,321,226
Ensembl chrNW_004624809:9,119,951...9,339,604
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452
JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chrNW_004624747:20,603,319...20,728,346
Ensembl chrNW_004624747:20,590,906...20,727,962
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7834360)
(PMID:1306163)
(PMID:10630211)
MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) TreeGrafter
MGI
Ensembl
PMID:20153830 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:21,718,023...21,720,907
Ensembl chrNW_004624766:21,718,169...21,720,907
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (PMID:20041218) MGI PMID:20041218 NCBI chrNW_004624781:8,694,044...8,907,701
Ensembl chrNW_004624781:8,745,780...8,907,701
JBrowse link
G Ldb1 LIM domain binding 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624831:1,573,058...1,584,861
Ensembl chrNW_004624831:1,571,942...1,584,775
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17664423) MGI
Ensembl
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624747:19,088,372...19,097,406
Ensembl chrNW_004624747:19,088,311...19,097,080
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575
JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within ISO (PMID:8996814) MGI PMID:8996814 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:24491816)
(PMID:21937600)
MGI PMID:21937600 PMID:24491816 NCBI chrNW_004624778:10,757,829...10,807,277
Ensembl chrNW_004624778:10,758,013...10,809,789
JBrowse link
G Slc25a46 solute carrier family 25 member 46 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28934388) Ensembl
MGI
PMID:28934388 GO_REF:0000107 NCBI chrNW_004624743:28,584,209...28,613,397 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chrNW_004624787:3,685,700...3,745,018
Ensembl chrNW_004624787:3,686,088...3,744,895
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30420556) Ensembl
MGI
PMID:30420556 GO_REF:0000107 NCBI chrNW_004624752:5,883,039...5,901,333
Ensembl chrNW_004624752:5,883,042...5,903,687
JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16906134) Ensembl
MGI
PMID:16906134 GO_REF:0000107 NCBI chrNW_004624746:12,540,969...12,566,989
Ensembl chrNW_004624746:12,540,633...12,567,376
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chrNW_004624809:9,119,412...9,321,226
Ensembl chrNW_004624809:9,119,951...9,339,604
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052)
(PMID:16625205)
MGI PMID:16625205 PMID:20577052 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chrNW_004624892:3,260,008...3,270,464
Ensembl chrNW_004624892:3,259,819...3,270,464
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chrNW_004624760:9,986,529...9,991,261
Ensembl chrNW_004624760:9,986,656...9,995,252
JBrowse link
G Klhl1 kelch like family member 1 acts_upstream_of_or_within ISO (PMID:17005861) MGI PMID:17005861 NCBI chrNW_004624748:30,948,092...31,387,128
Ensembl chrNW_004624748:30,948,029...31,387,128
JBrowse link
G LOC101712532 cytochrome b-c1 complex subunit 8 involved_in ISO (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chrNW_004624733:39,233,359...39,235,008
Ensembl chrNW_004624733:39,233,359...39,234,945
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:17712420) MGI PMID:17712420 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Sez6 seizure related 6 homolog acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16814779) MGI
Ensembl
PMID:16814779 GO_REF:0000107 NCBI chrNW_004624786:1,520,548...1,567,787
Ensembl chrNW_004624786:1,518,420...1,567,879
JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chrNW_004624747:2,754,556...2,944,644
Ensembl chrNW_004624747:2,879,589...2,941,759
JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chrNW_004624782:13,312,864...13,332,507
Ensembl chrNW_004624782:13,312,751...13,333,435
JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327
JBrowse link
G Whrn whirlin involved_in ISO (MGI:5516521|PMID:24011083) CACAO PMID:24011083 MGI:5516521 NCBI chrNW_004624760:20,700,632...20,788,628
Ensembl chrNW_004624760:20,700,593...20,788,628
JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20502676) Ensembl
MGI
PMID:20502676 GO_REF:0000107 NCBI chrNW_004624784:13,973,631...14,011,921
Ensembl chrNW_004624784:13,973,551...14,013,693
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chrNW_004624818:3,255,835...3,648,634
Ensembl chrNW_004624818:3,388,149...3,648,634
JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Coq8b coenzyme Q8B involved_in ISO (PMID:27499294) UniProt PMID:27499294 NCBI chrNW_004624925:623,656...655,940
Ensembl chrNW_004624925:622,811...655,948
JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 acts_upstream_of_or_within ISO (PMID:20231455) MGI PMID:20231455 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650
JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033
JBrowse link
G Lhx5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624747:19,088,372...19,097,406
Ensembl chrNW_004624747:19,088,311...19,097,080
JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chrNW_004624824:6,112,644...6,202,936
Ensembl chrNW_004624824:6,141,213...6,202,936
JBrowse link
G Acvr1c activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chrNW_004624732:8,130,970...8,247,528
Ensembl chrNW_004624732:8,130,962...8,247,289
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:7891151) MGI PMID:7891151 NCBI chrNW_004624809:9,119,412...9,321,226
Ensembl chrNW_004624809:9,119,951...9,339,604
JBrowse link
G Aif1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chrNW_004624754:24,590,071...24,591,913
Ensembl chrNW_004624754:24,590,071...24,591,904
JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004624760:7,684,098...7,693,051
Ensembl chrNW_004624760:7,684,109...7,693,405
JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004624736:9,428,736...9,494,645 JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chrNW_004624816:5,184,423...5,189,691
Ensembl chrNW_004624816:5,184,536...5,187,659
JBrowse link
G Arhgap32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chrNW_004624812:3,278,564...3,474,004
Ensembl chrNW_004624812:3,282,299...3,597,436
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chrNW_004624765:782,703...809,461
Ensembl chrNW_004624765:782,701...809,448
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:16880690) MGI PMID:16880690 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Atrn attractin acts_upstream_of_or_within ISO (PMID:18064672) MGI PMID:18064672 NCBI chrNW_004624741:4,559,149...4,745,840
Ensembl chrNW_004624741:4,559,121...4,745,996
JBrowse link
G Cd3e CD3e molecule involved_in ISO (MGI:3718938|PMID:17502348) ARUK-UCL PMID:17502348 MGI:3718938 NCBI chrNW_004624784:13,714,667...13,726,881
Ensembl chrNW_004624784:13,712,920...13,726,950
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11226314) Ensembl
MGI
PMID:11226314 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11226314)
(PMID:11517264)
Ensembl
MGI
PMID:11226314 PMID:11517264 GO_REF:0000107 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chrNW_004624823:6,053,469...6,054,748
Ensembl chrNW_004624823:6,053,550...6,054,659
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624766:21,718,023...21,720,907
Ensembl chrNW_004624766:21,718,169...21,720,907
JBrowse link
G Ckb creatine kinase B ISO RGD PMID:12093362 RGD:625711 NCBI chrNW_004624734:1,346,056...1,349,383
Ensembl chrNW_004624734:1,346,510...1,349,383
JBrowse link
G Cntn1 contactin 1 acts_upstream_of_or_within ISO (PMID:18354028) MGI PMID:18354028 NCBI chrNW_004624917:292,404...752,017
Ensembl chrNW_004624917:471,837...750,245
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (PMID:25877302) MGI PMID:25877302 NCBI chrNW_004624759:17,763,200...17,879,603
Ensembl chrNW_004624759:17,763,585...17,855,954
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chrNW_004624739:114,383...161,010
Ensembl chrNW_004624739:114,342...161,044
JBrowse link
G En1 engrailed homeobox 1 involved_in ISO (MGI:82938|PMID:8848044) ParkinsonsUK-UCL PMID:8848044 MGI:82938 NCBI chrNW_004624732:26,333,642...26,338,450
Ensembl chrNW_004624732:26,333,653...26,337,904
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:16542644 RGD:1601098 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (MGI:3718938|PMID:17502348) ARUK-UCL PMID:17502348 MGI:3718938 NCBI chrNW_004624826:97,605...112,101 JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:4359553|PMID:19668217) UniProt PMID:19668217 MGI:4359553 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17619227)
(PMID:15983371)
MGI PMID:15983371 PMID:17619227 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:17983671) MGI PMID:17983671 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:7057182 RGD:2301991 NCBI chrNW_004624745:21,735,431...21,763,330
Ensembl chrNW_004624745:21,734,282...21,762,734
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chrNW_004624847:1,878,946...1,881,794
Ensembl chrNW_004624847:1,879,007...1,881,669
JBrowse link
G Glud1 glutamate dehydrogenase 1 ISO RGD PMID:7182074 RGD:10047093 NCBI chrNW_004624841:133,267...171,324 JBrowse link
G Gpx4 glutathione peroxidase 4 acts_upstream_of_or_within ISO (PMID:24599700) MGI PMID:24599700 NCBI chrNW_004624828:7,534,251...7,536,675
Ensembl chrNW_004624828:7,534,449...7,536,586
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:19115409 RGD:10041070 NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9764759 RGD:10059383 NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:21443795 PMID:23397157 RGD:10403039 RGD:12904969 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G Insr insulin receptor ISO RGD PMID:23397157 RGD:10403039 NCBI chrNW_004624828:345,135...485,856
Ensembl chrNW_004624828:345,135...486,184
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chrNW_004624766:9,360,038...9,400,106
Ensembl chrNW_004624766:9,359,511...9,400,106
JBrowse link
G Ldb1 LIM domain binding 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624831:1,573,058...1,584,861
Ensembl chrNW_004624831:1,571,942...1,584,775
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033
JBrowse link
G Lhx5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624747:19,088,372...19,097,406
Ensembl chrNW_004624747:19,088,311...19,097,080
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1638738) Ensembl
MGI
PMID:1638738 GO_REF:0000107 NCBI chrNW_004624826:3,541,291...3,689,039
Ensembl chrNW_004624826:3,543,191...3,689,062
JBrowse link
G LOC101704598 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:16329132 RGD:1599699 NCBI chrNW_004624781:288,594...298,876
Ensembl chrNW_004624781:288,594...300,429
JBrowse link
G LOC101724812 C-C chemokine receptor type 1 ISO RGD PMID:12541321 RGD:5688179 NCBI chrNW_004624730:74,822,848...74,828,614
Ensembl chrNW_004624730:74,826,659...74,827,726
JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chrNW_004624758:518,070...668,915
Ensembl chrNW_004624758:519,249...669,471
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) RGD
MGI
PMID:14751287 PMID:18571096 RGD:12743658 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246
JBrowse link
G Myo16 myosin XVI involved_in ISO PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chrNW_004624793:2,956,643...3,399,949 JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:10803578 PMID:15876152 RGD:2293531 RGD:5688232 NCBI chrNW_004624738:6,770,745...7,054,616
Ensembl chrNW_004624738:6,943,726...7,054,454
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chrNW_004624744:20,795,385...21,078,706
Ensembl chrNW_004624744:20,938,555...21,078,690
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:10803578 RGD:2293531 NCBI chrNW_004624790:7,229,152...7,358,627
Ensembl chrNW_004624790:7,232,519...7,358,684
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO RGD PMID:10803578 RGD:2293531 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chrNW_004624747:23,777,645...23,887,804
Ensembl chrNW_004624747:23,777,325...23,865,804
JBrowse link
G Ncstn nicastrin ISO RGD PMID:16298244 RGD:13801190 NCBI chrNW_004624794:908,227...923,474
Ensembl chrNW_004624794:905,857...924,003
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in ISO (MGI:2159022|PMID:10398678) UniProt
RGD
PMID:10398678 PMID:12242038 MGI:2159022 RGD:1625048 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nr2c2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (MGI:5285161|PMID:20393820) UniProt PMID:20393820 MGI:5285161 NCBI chrNW_004624872:953,428...1,028,738
Ensembl chrNW_004624872:953,097...981,974
JBrowse link
G Ntm neurotrimin ISO RGD PMID:12373100 RGD:2314481 NCBI chrNW_004624812:5,834,367...6,812,623
Ensembl chrNW_004624812:5,834,748...6,812,837
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO RGD PMID:20395366 RGD:11533946 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Pax6 paired box 6 ISO RGD PMID:11688562 RGD:8552644 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 involved_in ISO (MGI:5304241|PMID:21871565) UniProt PMID:21871565 MGI:5304241 NCBI chrNW_004624780:14,803,750...15,130,156
Ensembl chrNW_004624780:14,804,030...15,129,497
JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chrNW_004624743:33,012,920...33,083,776
Ensembl chrNW_004624743:33,012,922...33,083,654
JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within ISO (PMID:31511635) MGI PMID:31511635 NCBI chrNW_004624860:3,396,105...3,417,986
Ensembl chrNW_004624860:3,396,237...3,400,909
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:15763176 RGD:7777107 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812
JBrowse link
G Psen1 presenilin 1 ISO RGD PMID:16298244 RGD:13801190 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO RGD PMID:9917071 RGD:10045971 NCBI chrNW_004624742:783,612...856,039
Ensembl chrNW_004624742:783,612...855,900
JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISO (PMID:15543146)
(MGI:3703683|PMID:15543146)
UniProt PMID:15543146 MGI:3703683 NCBI chrNW_004624796:5,548,982...5,550,563
Ensembl chrNW_004624796:5,549,184...5,550,439
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:8653419 RGD:10043831 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184
JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within ISO (PMID:15842738) MGI PMID:15842738 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chrNW_004624818:3,255,835...3,648,634
Ensembl chrNW_004624818:3,388,149...3,648,634
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17558409) MGI PMID:17558409 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chrNW_004624731:2,401,358...2,498,212
Ensembl chrNW_004624731:2,401,380...2,498,211
JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chrNW_004624818:8,362,107...8,371,565
Ensembl chrNW_004624818:8,365,359...8,371,386
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chrNW_004624749:2,737,251...2,747,540
Ensembl chrNW_004624749:2,737,251...2,745,979
JBrowse link
G Sstr1 somatostatin receptor 1 ISO RGD PMID:9166718 RGD:2325007 NCBI chrNW_004624813:7,538,104...7,543,836
Ensembl chrNW_004624813:7,539,304...7,540,479
JBrowse link
G Sstr2 somatostatin receptor 2 ISO RGD PMID:9166718 RGD:2325007 NCBI chrNW_004624801:3,198,137...3,205,936
Ensembl chrNW_004624801:3,198,204...3,206,481
JBrowse link
G Sstr3 somatostatin receptor 3 ISO RGD PMID:9166718 RGD:2325007 NCBI chrNW_004624752:10,623,360...10,626,759
Ensembl chrNW_004624752:10,619,078...10,626,754
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:24013501) MGI PMID:24013501 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004624804:9,841,401...10,002,592
Ensembl chrNW_004624804:9,848,512...10,002,693
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chrNW_004624787:3,685,700...3,745,018
Ensembl chrNW_004624787:3,686,088...3,744,895
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chrNW_004624771:15,425,610...15,432,012
Ensembl chrNW_004624771:15,425,604...15,430,542
JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:11344116) MGI PMID:11344116 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004624771:3,160,528...3,280,860
Ensembl chrNW_004624771:3,160,224...3,278,787
JBrowse link
G Cbs cystathionine beta-synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16160063) Ensembl
MGI
PMID:16160063 GO_REF:0000107 NCBI chrNW_004624745:27,676,430...27,687,573
Ensembl chrNW_004624745:27,673,748...27,688,462
JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:11456442) MGI PMID:11456442 NCBI chrNW_004624809:10,414,935...10,417,838
Ensembl chrNW_004624809:10,415,592...10,416,596
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO (PMID:19270340) MGI PMID:19270340 NCBI chrNW_004624775:18,410,514...18,443,169
Ensembl chrNW_004624775:18,410,755...18,439,246
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17166916) MGI PMID:17166916 NCBI chrNW_004624760:8,701,204...8,772,147
Ensembl chrNW_004624760:8,698,139...8,772,147
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chrNW_004624778:10,757,829...10,807,277
Ensembl chrNW_004624778:10,758,013...10,809,789
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:1,087,611...1,113,275
Ensembl chrNW_004624907:1,087,611...1,113,266
JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:9338785) MGI PMID:9338785 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chrNW_004624760:9,986,529...9,991,261
Ensembl chrNW_004624760:9,986,656...9,995,252
JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) BHF-UCL PMID:15035989 MGI:3621833 NCBI chrNW_004624845:2,972,308...3,055,596
Ensembl chrNW_004624845:3,046,063...3,050,560
JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15249135) MGI PMID:15249135 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004624784:7,093,457...7,178,448
Ensembl chrNW_004624784:7,094,736...7,175,072
JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in ISO (PMID:22926142) UniProt PMID:22926142 NCBI chrNW_004624855:3,611,016...3,677,813
Ensembl chrNW_004624855:3,611,176...3,677,675
JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO (PMID:7618084) MGI PMID:7618084 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624808:7,577,422...8,091,216
Ensembl chrNW_004624808:7,578,286...8,091,811
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 involved_in ISO (MGI:5607347|PMID:25078650) UniProt PMID:25078650 MGI:5607347 NCBI chrNW_004624764:4,778,563...4,791,505
Ensembl chrNW_004624764:4,778,657...4,791,458
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270) MGI PMID:16920270 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18786357) MGI PMID:18786357 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO (PMID:12897163) MGI PMID:12897163 NCBI chrNW_004624833:914,621...940,661
Ensembl chrNW_004624833:913,337...940,611
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10653000), (PMID:9288097) Ensembl
MGI
PMID:9288097 PMID:10653000 GO_REF:0000107 NCBI chrNW_004624860:3,771,949...3,790,982
Ensembl chrNW_004624860:3,771,963...3,790,985
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:16079160) MGI PMID:16079160 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (PMID:22405202) MGI PMID:22405202 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Ahsg alpha 2-HS glycoprotein ISO RGD PMID:2423927 RGD:1626077 NCBI chrNW_004624730:70,149,461...70,156,058
Ensembl chrNW_004624730:70,149,850...70,156,039
JBrowse link
G Akirin2 akirin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624799:6,620,102...6,644,286
Ensembl chrNW_004624799:6,625,549...6,644,286
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:24220505) MGI PMID:24220505 NCBI chrNW_004624798:3,164,145...3,223,810
Ensembl chrNW_004624798:3,165,393...3,225,181
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205) MGI PMID:16625205 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chrNW_004624765:782,703...809,461
Ensembl chrNW_004624765:782,701...809,448
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:16325379) MGI PMID:16325379 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:23527305) RGD
MGI
PMID:19362129 PMID:23527305 RGD:11576282 NCBI chrNW_004624907:715,109...736,040
Ensembl chrNW_004624907:715,094...736,432
JBrowse link
G Bad BCL2 associated agonist of cell death ISO RGD PMID:9813151 RGD:2315711 NCBI chrNW_004624767:22,025,721...22,037,283
Ensembl chrNW_004624767:22,026,133...22,037,277
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:15342910) RGD
MGI
PMID:9813151 PMID:15342910 RGD:2315711 NCBI chrNW_004624832:5,050,222...5,068,565
Ensembl chrNW_004624832:5,050,222...5,055,506
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18032602) MGI
Ensembl
PMID:18032602 GO_REF:0000107 NCBI chrNW_004624757:55,861...88,703
Ensembl chrNW_004624757:55,811...88,562
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624781:1,502,069...1,553,101
Ensembl chrNW_004624781:1,503,816...1,538,755
JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO RGD PMID:9813151 RGD:2315711 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Bcl2a1 BCL2 related protein A1 ISO RGD PMID:9813151 RGD:2315711 NCBI chrNW_004624941:907,382...932,751
Ensembl chrNW_004624941:907,119...933,356
JBrowse link
G Bcl2l1 BCL2 like 1 ISO RGD PMID:9813151 RGD:2315711 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507
JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:16765336 RGD:11561980 NCBI chrNW_004624737:14,848,355...14,863,731
Ensembl chrNW_004624737:14,848,350...14,862,965
JBrowse link
G Btbd3 BTB domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:12,849,238...12,879,844 JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624735:10,201,030...10,927,349
Ensembl chrNW_004624735:10,201,526...10,432,896
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO RGD PMID:10749215 RGD:11576295 NCBI chrNW_004624762:13,723,347...14,106,844
Ensembl chrNW_004624762:13,722,691...14,106,844
JBrowse link
G Ccdc85c coiled-coil domain containing 85C involved_in ISO (MGI:5305566|PMID:22056358) UniProt PMID:22056358 MGI:5305566 NCBI chrNW_004624734:4,310,662...4,366,209
Ensembl chrNW_004624734:4,310,607...4,366,209
JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25100583) MGI
Ensembl
PMID:25100583 GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9698328) Ensembl
MGI
PMID:9698328 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (PMID:16648472) MGI PMID:16648472 NCBI chrNW_004624812:107,632...203,791
Ensembl chrNW_004624812:109,405...203,519
JBrowse link
G Celf1 CUGBP Elav-like family member 1 acts_upstream_of_or_within ISO (PMID:32245946) MGI PMID:32245946 NCBI chrNW_004624767:1,263,231...1,344,896 JBrowse link
G Cep120 centrosomal protein 120 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17920017) Ensembl
MGI
PMID:17920017 GO_REF:0000107 NCBI chrNW_004624774:18,587,363...18,654,726
Ensembl chrNW_004624774:18,587,485...18,654,897
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893), (PMID:18987363) BHF-UCL PMID:18179893 PMID:18987363 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (MGI:5288127|PMID:21768377) UniProt PMID:21768377 MGI:5288127 NCBI chrNW_004624899:1,192,078...1,230,528
Ensembl chrNW_004624899:1,192,360...1,230,404
JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004624945:734,532...767,184
Ensembl chrNW_004624945:734,532...767,168
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:12801913 RGD:634609 NCBI chrNW_004624741:20,565,686...20,581,708
Ensembl chrNW_004624741:20,564,474...20,581,716
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO RGD PMID:7735332 RGD:11565823 NCBI chrNW_004624741:1,566,380...1,635,365 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO RGD PMID:7735332 RGD:11565823 NCBI chrNW_004624746:28,012,543...28,064,610
Ensembl chrNW_004624746:28,012,556...28,060,413
JBrowse link
G Dab1 DAB adaptor protein 1 ISO RGD PMID:20368265 RGD:2324624 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
G Dcc DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624778:15,979,350...17,225,263
Ensembl chrNW_004624778:15,979,467...17,222,039
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18997113) MGI PMID:18997113 NCBI chrNW_004624734:7,604,049...7,681,481
Ensembl chrNW_004624734:7,608,273...7,651,819
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO RGD PMID:14597197 RGD:152975667 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Dmd dystrophin ISO RGD PMID:1454857 RGD:12880362 NCBI chrNW_004624762:22,306,962...24,846,427
Ensembl chrNW_004624762:22,746,729...24,847,938
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12764040)
(PMID:25100583)
(PMID:16892058)
MGI PMID:12764040 PMID:16892058 PMID:25100583 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:12764040) MGI PMID:12764040 NCBI chrNW_004624737:29,103,378...29,110,356
Ensembl chrNW_004624737:29,103,279...29,110,344
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in ISO (MGI:4821246|PMID:19506035) UniProt PMID:19506035 MGI:4821246 NCBI chrNW_004624777:6,095,166...6,293,142
Ensembl chrNW_004624777:6,095,643...6,292,980
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004624758:5,750,804...5,877,797
Ensembl chrNW_004624758:5,792,514...5,877,709
JBrowse link
G Flna filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chrNW_004624946:812,278...836,307
Ensembl chrNW_004624946:812,287...837,273
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:32385110 RGD:405649740 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chrNW_004624820:3,542,767...3,547,180
Ensembl chrNW_004624820:3,543,687...3,545,147
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (PMID:18987363) BHF-UCL PMID:18987363 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488
JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:7057182 RGD:2301991 NCBI chrNW_004624745:21,735,431...21,763,330
Ensembl chrNW_004624745:21,734,282...21,762,734
JBrowse link
G Gng12 G protein subunit gamma 12 ISO RGD PMID:9003074 RGD:2314446 NCBI chrNW_004624742:27,652,114...27,721,668
Ensembl chrNW_004624742:27,700,538...27,718,555
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chrNW_004624733:35,337,039...35,648,184
Ensembl chrNW_004624733:35,339,683...35,647,349
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:14597197 RGD:152975667 NCBI chrNW_004624848:1,132,939...1,261,110
Ensembl chrNW_004624848:1,135,032...1,261,087
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:10963597)
(PMID:12657691)
MGI PMID:10963597 PMID:12657691 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19409459 RGD:2325985 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19409459 RGD:2325985 NCBI chrNW_004624752:24,008,520...24,480,834
Ensembl chrNW_004624752:24,135,487...24,459,288
JBrowse link
G Grip1 glutamate receptor interacting protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chrNW_004624802:1,558,364...1,954,695
Ensembl chrNW_004624802:1,264,833...1,964,202
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (PMID:12972594) MGI PMID:12972594 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:18054780 PMID:22102872 RGD:10002783 RGD:10041004 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624860:1,915,108...1,923,071
Ensembl chrNW_004624860:1,915,344...1,923,062
JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624772:6,298,113...6,311,614
Ensembl chrNW_004624772:6,305,550...6,309,906
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chrNW_004624772:5,967,042...6,004,647
Ensembl chrNW_004624772:5,967,071...5,991,484
JBrowse link
G Kdm1a lysine demethylase 1A ISO RGD PMID:20164337 RGD:9588288 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
G Kif26a kinesin family member 26A involved_in ISO (PMID:36228617) UniProt PMID:36228617 NCBI chrNW_004624734:884,922...917,393
Ensembl chrNW_004624734:885,863...915,403
JBrowse link
G Kif5a kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chrNW_004624802:10,375,132...10,409,575
Ensembl chrNW_004624802:10,375,774...10,409,566
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
ISO (MGI:5699500|PMID:26371318), (MGI:5817507|PMID:28053041)
(PMID:19820705)
UniProt
MGI
PMID:19820705 PMID:26371318 PMID:28053041 MGI:5699500 MGI:5817507 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G LOC101701891 histone H2AX ISO RGD PMID:3622934 RGD:8693731 NCBI chrNW_004624784:14,475,813...14,477,269
Ensembl chrNW_004624784:14,476,730...14,477,161
JBrowse link
G LOC101715424 tubulin alpha-1B chain-like involved_in ISO (PMID:22101068)
(PMID:31386652)
MGI PMID:22101068 PMID:31386652 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:8930375 RGD:10046019 NCBI chrNW_004624802:10,734,907...10,812,888
Ensembl chrNW_004624802:10,734,263...10,812,763
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270) MGI PMID:16920270 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893
JBrowse link
G Lrp8 LDL receptor related protein 8 ISO RGD PMID:20368265 RGD:2324624 NCBI chrNW_004624934:1,145,982...1,220,177
Ensembl chrNW_004624934:1,146,000...1,215,922
JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO (PMID:21947081) MGI PMID:21947081 NCBI chrNW_004624861:4,373,743...4,556,933 JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512
JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246
JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein involved_in ISO (MGI:6760736|PMID:24323429) UniProt PMID:24323429 MGI:6760736 NCBI chrNW_004624777:19,569,376...19,582,226 JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624741:11,323,935...11,447,669
Ensembl chrNW_004624741:11,425,368...11,435,706
JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624792:3,109,779...3,128,949
Ensembl chrNW_004624792:3,109,779...3,128,957
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chrNW_004624738:6,770,745...7,054,616
Ensembl chrNW_004624738:6,943,726...7,054,454
JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:21529752)
(PMID:18469343)
UniProt
MGI
PMID:18469343 PMID:21529752 NCBI chrNW_004624782:236,715...284,200
Ensembl chrNW_004624782:236,735...268,516
JBrowse link
G Nefh neurofilament heavy chain ISO RGD PMID:10439464 RGD:9743942 NCBI chrNW_004624747:5,806,576...5,816,158
Ensembl chrNW_004624747:5,806,645...5,815,554
JBrowse link
G Nefl neurofilament light chain ISO RGD PMID:10439464 RGD:9743942 NCBI chrNW_004624758:20,063,109...20,068,459
Ensembl chrNW_004624758:20,062,685...20,068,609
JBrowse link
G Nefm neurofilament medium chain ISO RGD PMID:10439464 RGD:9743942 NCBI chrNW_004624758:20,030,450...20,036,105 JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:11297510) MGI PMID:11297510 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:18477394) MGI PMID:18477394 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:9067840) DFLAT PMID:9067840 NCBI chrNW_004624739:6,277,704...6,285,454
Ensembl chrNW_004624739:6,277,612...6,285,397
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:12527005), (PMID:15950290)
(PMID:11997145), (PMID:16000615)
MGI PMID:11997145 PMID:12527005 PMID:15950290 PMID:16000615 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 ISO RGD PMID:21056632 RGD:124713572 NCBI chrNW_004624732:9,572,160...9,589,624
Ensembl chrNW_004624732:9,581,779...9,589,942
JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (MGI:6369928|PMID:31462248) UniProt PMID:31462248 MGI:6369928 NCBI chrNW_004624740:14,413,451...14,418,255
Ensembl chrNW_004624740:14,413,489...14,419,340
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:3776308|PMID:15372074) UniProt PMID:15372074 MGI:3776308 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within
involved_in
ISO (PMID:18469343)
(PMID:11344260)
(PMID:9063735)
MGI
BHF-UCL
PMID:9063735 PMID:11344260 PMID:18469343 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:33,659,625...33,758,680
Ensembl chrNW_004624734:33,658,975...33,721,548
JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO (PMID:23349049) MGI PMID:23349049 NCBI chrNW_004624930:491,220...660,476
Ensembl chrNW_004624930:491,892...667,530
JBrowse link
G Pax6 paired box 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISO (MGI:6316857|PMID:30256902) UniProt PMID:30256902 MGI:6316857 NCBI chrNW_004624756:12,935,048...13,449,312
Ensembl chrNW_004624756:12,934,212...13,447,326
JBrowse link
G Plcb1 phospholipase C beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:9,030,817...9,859,597
Ensembl chrNW_004624741:9,031,204...9,856,556
JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chrNW_004624795:6,124,273...6,137,776
Ensembl chrNW_004624795:6,124,159...6,137,955
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:16079160) MGI PMID:16079160 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within ISO (PMID:15842738) MGI PMID:15842738 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (PMID:21491433) RGD
MGI
PMID:10436054 PMID:21491433 RGD:634730 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:16581179 RGD:12879481 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037
JBrowse link
G Slc2a3 solute carrier family 2 member 3 ISO RGD PMID:16581179 RGD:12879481 NCBI chrNW_004624860:5,069,246...5,153,435 JBrowse link
G Slc38a2 solute carrier family 38 member 2 ISO RGD PMID:21718781 RGD:9999217 NCBI chrNW_004624816:5,888,447...5,902,009
Ensembl chrNW_004624816:5,888,414...5,902,897
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chrNW_004624751:4,309,518...4,335,332
Ensembl chrNW_004624751:4,309,447...4,336,083
JBrowse link
G Tacc1 transforming acidic coiled-coil containing protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17920017) MGI
TreeGrafter
PMID:17920017 GO_REF:0000118 NCBI chrNW_004624780:4,769,270...4,886,475
Ensembl chrNW_004624780:4,771,789...4,847,317
JBrowse link
G Tacc2 transforming acidic coiled-coil containing protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17920017) TreeGrafter
MGI
PMID:17920017 GO_REF:0000118 NCBI chrNW_004624737:24,472,104...24,685,969
Ensembl chrNW_004624737:24,471,943...24,649,007
JBrowse link
G Tacc3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chrNW_004624755:25,683,314...25,695,102
Ensembl chrNW_004624755:25,683,137...25,692,504
JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in ISO (PMID:30186101) RGD
MGI
PMID:10749215 PMID:30186101 RGD:11576295 NCBI chrNW_004624732:4,043,867...4,052,621
Ensembl chrNW_004624732:4,043,867...4,052,551
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:19749747) MGI PMID:19749747 NCBI chrNW_004624741:23,286,526...23,299,318
Ensembl chrNW_004624741:23,290,519...23,298,121
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:21295554 RGD:5128671 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
JBrowse link
G Trappc9 trafficking protein particle complex subunit 9 involved_in ISO (PMID:20004763) GO_Central PMID:20004763 NCBI chrNW_004624735:15,898,189...16,661,799
Ensembl chrNW_004624735:15,897,425...16,661,208
JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO (PMID:17522300) MGI PMID:17522300 NCBI chrNW_004624760:3,479,028...3,536,612
Ensembl chrNW_004624760:3,498,692...3,532,011
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) MGI PMID:34235142 NCBI chrNW_004624730:77,495,705...77,876,547
Ensembl chrNW_004624730:77,495,747...77,875,622
JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:20368265 RGD:2324624 NCBI chrNW_004624736:7,280,478...7,316,897
Ensembl chrNW_004624736:7,280,490...7,316,946
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624772:4,749,748...4,821,490
Ensembl chrNW_004624772:4,750,931...4,806,717
JBrowse link
G Wdr62 WD repeat domain 62 involved_in ISO (PMID:20729831) UniProt PMID:20729831 NCBI chrNW_004624794:10,309,855...10,358,018
Ensembl chrNW_004624794:10,310,129...10,348,686
JBrowse link
G Xab2 XPA binding protein 2 ISO RGD PMID:12801913 RGD:634609 NCBI chrNW_004624828:704,400...711,963
Ensembl chrNW_004624828:704,300...712,251
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon acts_upstream_of_or_within ISO (PMID:12796778) MGI PMID:12796778 NCBI chrNW_004624786:4,080,650...4,135,200
Ensembl chrNW_004624786:4,080,427...4,135,459
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chrNW_004624771:15,425,610...15,432,012
Ensembl chrNW_004624771:15,425,604...15,430,542
JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chrNW_004624758:22,182,468...22,200,076
Ensembl chrNW_004624758:22,182,951...22,200,063
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025
JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chrNW_004624801:10,862,490...10,864,856
Ensembl chrNW_004624801:10,862,502...10,864,879
JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO (PMID:12050665) UniProt PMID:12050665 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15028753) Ensembl
MGI
PMID:15028753 GO_REF:0000107 NCBI chrNW_004624787:9,514,170...9,519,309
Ensembl chrNW_004624787:9,514,573...9,519,724
JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:15028753) MGI PMID:15028753 NCBI chrNW_004624787:9,528,942...9,532,252
Ensembl chrNW_004624787:9,530,034...9,533,109
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:15028753)
(PMID:18786356)
MGI PMID:15028753 PMID:18786356 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17678855) Ensembl
MGI
PMID:17678855 GO_REF:0000107 NCBI chrNW_004624787:9,514,170...9,519,309
Ensembl chrNW_004624787:9,514,573...9,519,724
JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chrNW_004624787:9,528,942...9,532,252
Ensembl chrNW_004624787:9,530,034...9,533,109
JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (PMID:17460091) MGI PMID:17460091 NCBI chrNW_004624897:1,279,138...1,303,210 JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (PMID:11714688) MGI PMID:11714688 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17409246) MGI PMID:17409246 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:17409246) MGI PMID:17409246 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (PMID:21338885) MGI PMID:21338885 NCBI chrNW_004624888:3,462,132...3,467,701
Ensembl chrNW_004624888:3,462,233...3,468,293
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chrNW_004624760:13,066,632...13,092,006
Ensembl chrNW_004624760:13,066,703...13,097,468
JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd5 chromodomain helicase DNA binding protein 5 involved_in ISO (MGI:5532595|PMID:23948251) UniProt PMID:23948251 MGI:5532595 NCBI chrNW_004624818:5,203,200...5,251,057
Ensembl chrNW_004624818:5,203,304...5,249,033
JBrowse link
G CUNH21orf91 chromosome unknown C21orf91 homolog involved_in ISO (MGI:5908509|PMID:27404227) UniProt PMID:27404227 MGI:5908509 NCBI chrNW_004624745:6,180,514...6,213,299
Ensembl chrNW_004624745:6,185,226...6,201,376
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:32245946) Ensembl
MGI
PMID:32245946 GO_REF:0000107 NCBI chrNW_004624859:2,875,652...3,023,142
Ensembl chrNW_004624859:2,874,945...3,023,001
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:23178126) MGI PMID:23178126 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Eomes eomesodermin involved_in ISO (MGI:3831469|PMID:18940588) UniProt PMID:18940588 MGI:3831469 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (PMID:21338885) MGI PMID:21338885 NCBI chrNW_004624888:3,462,132...3,467,701
Ensembl chrNW_004624888:3,462,233...3,468,293
JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO (PMID:22951639) MGI PMID:22951639 NCBI chrNW_004624817:1,596,687...1,689,428
Ensembl chrNW_004624817:1,596,684...1,688,566
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:11297820) MGI PMID:11297820 NCBI chrNW_004624797:14,148,580...14,184,471 JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674 NCBI chrNW_004624760:13,066,632...13,092,006
Ensembl chrNW_004624760:13,066,703...13,097,468
JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:12902391), (PMID:15950290) MGI PMID:12902391 PMID:15950290 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004624891:1,907,233...2,429,714
Ensembl chrNW_004624891:1,908,044...2,425,144
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO