Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
go back to main search page
Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:14,811,152...14,846,305
Ensembl chrNW_004936483:14,811,152...14,846,305
JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936710:1,258,088...1,296,346
Ensembl chrNW_004936710:1,257,931...1,298,885
JBrowse link
G Aldh3a2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936881:127,090...150,269
Ensembl chrNW_004936881:127,023...150,292
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:843,577...865,798
Ensembl chrNW_004936671:843,577...865,881
JBrowse link
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936660:2,647,071...2,668,060
Ensembl chrNW_004936660:2,648,485...2,666,148
JBrowse link
G Aplp1 amyloid beta precursor like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936570:475,446...484,379
Ensembl chrNW_004936570:474,902...484,188
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936572:2,205,527...2,277,786
Ensembl chrNW_004936572:2,205,478...2,277,842
JBrowse link
G App amyloid beta precursor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:20,041,712...20,218,853
Ensembl chrNW_004936483:20,041,657...20,218,965
JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936566:271,807...289,526
Ensembl chrNW_004936566:273,714...274,847
JBrowse link
G Bcan brevican involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:5,816,196...5,828,531
Ensembl chrNW_004936580:5,816,359...5,828,126
JBrowse link
G Capg capping actin protein, gelsolin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936712:1,793,666...1,803,621
Ensembl chrNW_004936712:1,793,480...1,806,602
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:12,381,225...12,505,121
Ensembl chrNW_004936496:12,381,126...12,505,150
JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11823447) Ensembl
MGI
PMID:11823447 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
JBrowse link
G Dazap1 DAZ associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:730,626...758,074
Ensembl chrNW_004936588:740,038...758,074
JBrowse link
G Dhx30 DExH-box helicase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,419,165...1,454,797
Ensembl chrNW_004936596:1,421,094...1,455,356
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:27,504,419...27,529,196
Ensembl chrNW_004936474:27,500,669...27,529,205
JBrowse link
G Dner delta/notch like EGF repeat containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:6,734,924...7,037,947
Ensembl chrNW_004936525:6,735,049...7,037,042
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,150,504...4,156,483
Ensembl chrNW_004936488:4,150,460...4,156,480
JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:933,698...1,014,919
Ensembl chrNW_004936675:933,676...1,016,242
JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:16,745,310...16,762,422
Ensembl chrNW_004936491:16,745,310...16,762,422
JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:7,313,689...7,319,971
Ensembl chrNW_004936486:7,313,190...7,319,995
JBrowse link
G Fkrp fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20675713) Ensembl
MGI
PMID:20675713 GO_REF:0000107 NCBI chrNW_004936664:577,109...586,848
Ensembl chrNW_004936664:578,126...586,795
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within ISO (PMID:17005728) MGI PMID:17005728 NCBI chrNW_004936482:13,109,803...13,174,492
Ensembl chrNW_004936482:13,109,803...13,174,492
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18346921) Ensembl
MGI
PMID:18346921 GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531
JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628)
(PMID:12435629)
Ensembl
MGI
PMID:12435628 PMID:12435629 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Grhl3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11787818) Ensembl
MGI
PMID:11787818 GO_REF:0000107 NCBI chrNW_004936474:9,321,754...9,354,486
Ensembl chrNW_004936474:9,332,444...9,353,893
JBrowse link
G Gsn gelsolin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:9,749,755...9,802,787
Ensembl chrNW_004936487:9,764,944...9,802,841
JBrowse link
G Gsx2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11731457), (PMID:12724834) Ensembl
MGI
PMID:11731457 PMID:12724834 GO_REF:0000107 NCBI chrNW_004936482:16,703,936...16,706,224
Ensembl chrNW_004936482:16,704,193...16,705,729
JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:2,745,568...2,772,789
Ensembl chrNW_004936469:2,742,846...2,808,123
JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:14,849,778...14,868,094
Ensembl chrNW_004936483:14,849,183...14,859,212
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:2,175,414...2,181,825
Ensembl chrNW_004936596:2,175,361...2,182,799
JBrowse link
G Helt helt bHLH transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16968817) Ensembl
MGI
PMID:16968817 GO_REF:0000107 NCBI chrNW_004936554:4,245,684...4,247,832
Ensembl chrNW_004936554:4,245,648...4,247,700
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,758,098...8,759,684
Ensembl chrNW_004936474:8,758,030...8,759,823
JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10911993)
(PMID:9875844)
(PMID:9889105)
Ensembl
MGI
PMID:9875844 PMID:9889105 PMID:10911993 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302) Ensembl
MGI
PMID:15148302 GO_REF:0000107 NCBI chrNW_004936481:19,863,487...19,984,299
Ensembl chrNW_004936481:19,863,487...19,983,926
JBrowse link
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
G LOC101967130 cytochrome c oxidase subunit 7B, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,781,614...2,787,570
Ensembl chrNW_004936683:2,781,623...2,787,570
JBrowse link
G LOC101977861 cytochrome P450 26A1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074
JBrowse link
G LOC101978131 cytochrome P450 26C1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17067568) Ensembl
MGI
PMID:17067568 GO_REF:0000107 NCBI chrNW_004936601:1,818,037...1,828,400
Ensembl chrNW_004936601:1,817,983...1,828,185
JBrowse link
G Msi1 musashi RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936668:573,459...595,278
Ensembl chrNW_004936668:573,453...596,696
JBrowse link
G Msi2 musashi RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:5,337,571...5,704,331
Ensembl chrNW_004936490:5,342,512...5,704,709
JBrowse link
G Ncan neurocan involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:2,190,593...2,218,963
Ensembl chrNW_004936596:2,189,838...2,218,987
JBrowse link
G Ndn necdin, MAGE family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15649943) Ensembl
MGI
PMID:15649943 GO_REF:0000107 NCBI chrNW_004936805:849,218...850,894
Ensembl chrNW_004936805:849,345...850,322
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936509:10,421,821...10,425,927
Ensembl chrNW_004936509:10,423,126...10,424,196
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936490:14,801,636...14,803,437
Ensembl chrNW_004936490:14,802,275...14,803,423
JBrowse link
G Neurod4 neuronal differentiation 4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936891:471,576...482,195
Ensembl chrNW_004936891:474,111...482,095
JBrowse link
G Neurod6 neuronal differentiation 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936478:7,524,912...7,528,395
Ensembl chrNW_004936478:7,524,912...7,528,395
JBrowse link
G Ngfr nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11978834) Ensembl
MGI
PMID:11978834 GO_REF:0000107 NCBI chrNW_004936490:12,038,500...12,057,257
Ensembl chrNW_004936490:12,035,769...12,057,263
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10688202) Ensembl
MGI
PMID:10688202 GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Noto notochord homeobox involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:16,987,797...16,996,423
Ensembl chrNW_004936491:16,987,642...16,996,579
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:1,167,055...1,238,241
Ensembl chrNW_004936653:1,169,177...1,238,140
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:12652306)
(PMID:11731459)
MGI PMID:11731459 PMID:12652306 NCBI chrNW_004936495:1,433,124...1,449,409
Ensembl chrNW_004936495:1,432,598...1,442,918
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,523,658...1,553,464
Ensembl chrNW_004936783:1,523,661...1,576,568
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861161|PMID:10854042) Ensembl
UniProt
PMID:10854042 GO_REF:0000107 MGI:1861161 NCBI chrNW_004936588:2,287,941...2,302,875
Ensembl chrNW_004936588:2,287,996...2,302,691
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:12091320) MGI PMID:12091320 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11900467) InterPro
MGI
Ensembl
PMID:11900467 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936479:19,628,488...20,088,278
Ensembl chrNW_004936479:19,628,940...20,087,250
JBrowse link
G Scin scinderin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936795:418,874...495,990
Ensembl chrNW_004936795:418,436...495,936
JBrowse link
G Sema6b semaphorin 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,642,730...2,654,520
Ensembl chrNW_004936588:2,642,859...2,653,742
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
MGI
UniProt
PMID:12435628 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Slc2a1 solute carrier family 2 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10227690), (PMID:1714544) Ensembl
ARUK-UCL
PMID:1714544 PMID:10227690 GO_REF:0000107 NCBI chrNW_004936474:24,205,878...24,236,611
Ensembl chrNW_004936474:24,206,644...24,236,713
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
TreeGrafter
MGI
PMID:12435628 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936528:2,331,706...2,912,423
Ensembl chrNW_004936528:2,331,661...2,906,082
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:920,830...1,108,374
Ensembl chrNW_004936491:956,986...1,108,640
JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chrNW_004936470:44,159,449...44,436,295
Ensembl chrNW_004936470:44,159,419...44,436,330
JBrowse link
G Stk4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chrNW_004936514:7,686,760...7,784,948
Ensembl chrNW_004936514:7,686,087...7,785,025
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19624305) Ensembl
MGI
PMID:19624305 GO_REF:0000107 NCBI chrNW_004936474:24,788,175...24,837,471
Ensembl chrNW_004936474:24,788,195...24,837,395
JBrowse link
G Thoc6 THO complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,144,122...1,147,345
Ensembl chrNW_004936694:1,143,345...1,147,345
JBrowse link
G Tlx1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chrNW_004936600:4,564,246...4,569,774 JBrowse link
G Tlx3 T cell leukemia homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12023301) Ensembl
MGI
PMID:12023301 GO_REF:0000107 NCBI chrNW_004936609:3,772,432...3,774,554
Ensembl chrNW_004936609:3,772,353...3,774,607
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16199867) Ensembl
MGI
PMID:16199867 GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Tp53bp2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chrNW_004936526:936,981...1,000,070
Ensembl chrNW_004936526:936,359...1,000,076
JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936842:669,869...676,706
Ensembl chrNW_004936842:669,863...676,720
JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10601035)
(PMID:10601036)
Ensembl
TreeGrafter
MGI
PMID:10601035 PMID:10601036 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936486:6,972,972...6,978,544
Ensembl chrNW_004936486:6,974,662...6,978,542
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:15,079,446...15,110,238
Ensembl chrNW_004936491:15,078,598...15,111,252
JBrowse link
G Vcan versican involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:2,585,142...2,688,029
Ensembl chrNW_004936469:2,585,134...2,688,029
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:43,281,905...43,952,523
Ensembl chrNW_004936470:43,281,469...43,951,805
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28675177) Ensembl
MGI
PMID:28675177 GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451
Ensembl chrNW_004936497:2,126,061...2,161,485
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:389,877...570,595
Ensembl chrNW_004936612:395,177...570,595
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16598713) Ensembl
MGI
PMID:16598713 GO_REF:0000107 NCBI chrNW_004936574:17,643...175,762
Ensembl chrNW_004936574:17,684...178,293
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link
G Zic1 Zic family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11756505)
(PMID:9412507)
Ensembl
MGI
PMID:9412507 PMID:11756505 GO_REF:0000107 NCBI chrNW_004936519:7,997,824...8,001,614
Ensembl chrNW_004936519:7,994,455...8,002,487
JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:11756505) MGI PMID:11756505 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9140068) Ensembl
MGI
PMID:9140068 GO_REF:0000107 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798
JBrowse link
G Ghrh growth hormone releasing hormone involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15985453) Ensembl
MGI
PMID:15985453 GO_REF:0000107 NCBI chrNW_004936561:3,946,256...3,954,472
Ensembl chrNW_004936561:3,950,340...3,952,405
JBrowse link
G Ghrhr growth hormone releasing hormone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1270792), (PMID:1329576), (PMID:1504465) Ensembl
MGI
PMID:1270792 PMID:1329576 PMID:1504465 GO_REF:0000107 NCBI chrNW_004936478:7,188,826...7,202,854
Ensembl chrNW_004936478:7,188,826...7,201,932
JBrowse link
G Gsx1 GS homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8631293) Ensembl
MGI
PMID:8631293 GO_REF:0000107 NCBI chrNW_004936472:22,997,650...22,998,928
Ensembl chrNW_004936472:22,997,650...22,998,928
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18996108) Ensembl
MGI
PMID:18996108 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098
JBrowse link
G Prop1 PROP paired-like homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18996108) Ensembl
MGI
PMID:18996108 GO_REF:0000107 NCBI chrNW_004936739:1,854,072...1,856,657
Ensembl chrNW_004936739:1,854,072...1,856,657
JBrowse link
G Slc6a3 solute carrier family 6 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9247269) Ensembl
MGI
PMID:9247269 GO_REF:0000107 NCBI chrNW_004936815:359,775...400,690
Ensembl chrNW_004936815:359,775...400,690
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17440044) Ensembl
MGI
PMID:17440044 GO_REF:0000107 NCBI chrNW_004936471:7,812,163...7,831,258
Ensembl chrNW_004936471:7,813,128...7,831,258
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:7,740,887...7,820,488
Ensembl chrNW_004936522:7,740,887...7,816,297
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2664023|PMID:12805306) ARUK-UCL
Ensembl
PMID:12805306 GO_REF:0000107 MGI:2664023 NCBI chrNW_004936740:489,357...514,235
Ensembl chrNW_004936740:488,154...514,308
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25242307) Ensembl
MGI
PMID:25242307 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12527005) Ensembl
MGI
PMID:12527005 GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004936498:6,001,126...6,135,663
Ensembl chrNW_004936498:6,001,014...6,086,614
JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24441682) Ensembl
MGI
PMID:24441682 GO_REF:0000107 NCBI chrNW_004936469:17,481,049...17,489,535
Ensembl chrNW_004936469:17,479,842...17,490,710
JBrowse link
G Uba6 ubiquitin like modifier activating enzyme 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23499007) Ensembl
MGI
PMID:23499007 GO_REF:0000107 NCBI chrNW_004936582:780,911...901,734
Ensembl chrNW_004936582:780,892...869,026
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:561,822...571,817
Ensembl chrNW_004936474:561,822...571,622
JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19398581) Ensembl
MGI
PMID:19398581 GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068
JBrowse link
G Nfib nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11997145) Ensembl
MGI
PMID:11997145 GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Plxna4 plexin A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15814794) Ensembl
MGI
PMID:15814794 GO_REF:0000107 NCBI chrNW_004936579:3,025,251...3,449,347
Ensembl chrNW_004936579:3,092,924...3,444,012
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21055390) Ensembl
MGI
PMID:21055390 GO_REF:0000107 NCBI chrNW_004936498:5,434,912...5,487,354
Ensembl chrNW_004936498:5,434,911...5,447,147
JBrowse link
G Wdr47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chrNW_004936704:543,189...603,488
Ensembl chrNW_004936704:543,196...603,488
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chrNW_004936619:597,970...618,564
Ensembl chrNW_004936619:608,441...616,779
JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,418,342...1,422,005
Ensembl chrNW_004936727:1,418,799...1,422,147
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chrNW_004936484:19,713,299...19,721,144
Ensembl chrNW_004936484:19,716,165...19,721,261
JBrowse link
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286
JBrowse link
G Bace2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chrNW_004936500:2,362,994...2,449,783
Ensembl chrNW_004936500:2,368,334...2,449,789
JBrowse link
G C1qa complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:8,007,953...8,010,591
Ensembl chrNW_004936474:8,008,534...8,010,191
JBrowse link
G C5ar1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374
JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO
IEA
spinal cord astrocytes RGD
TreeGrafter
PMID:11771938 GO_REF:0000118 RGD:1626172 NCBI chrNW_004936581:3,710,171...3,715,753
Ensembl chrNW_004936581:3,710,160...3,715,638
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chrNW_004936560:4,519,858...4,545,763
Ensembl chrNW_004936560:4,519,474...4,545,796
JBrowse link
G Il1b interleukin 1 beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28377412) Ensembl
MGI
PMID:28377412 GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26607664) Ensembl
MGI
PMID:26607664 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521
JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23680462) Ensembl
MGI
PMID:23680462 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286
JBrowse link
G Grn granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004936727:1,418,342...1,422,005
Ensembl chrNW_004936727:1,418,799...1,422,147
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17360497) Ensembl
MGI
PMID:17360497 GO_REF:0000107 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,716,333...5,724,869
Ensembl chrNW_004936578:5,715,512...5,725,096
JBrowse link
G Gfap glial fibrillary acidic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11487638) Ensembl
MGI
PMID:11487638 GO_REF:0000107 NCBI chrNW_004936541:1,265,915...1,275,232
Ensembl chrNW_004936541:1,265,436...1,275,296
JBrowse link
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19907020) Ensembl
MGI
PMID:19907020 GO_REF:0000107 NCBI chrNW_004936529:826,178...841,304
Ensembl chrNW_004936529:826,142...841,337
JBrowse link
G Lamc3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19907020) Ensembl
MGI
PMID:19907020 GO_REF:0000107 NCBI chrNW_004936487:17,910,673...17,958,641
Ensembl chrNW_004936487:17,915,104...17,957,596
JBrowse link
G Plp1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chrNW_004936499:10,534,953...10,553,411
Ensembl chrNW_004936499:10,534,950...10,551,012
JBrowse link
G Ror1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004936692:1,327,779...1,702,350
Ensembl chrNW_004936692:1,328,195...1,699,703
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004936796:630,307...675,157
Ensembl chrNW_004936796:630,756...674,279
JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004936580:3,256,399...3,256,913
Ensembl chrNW_004936580:3,256,417...3,256,913
JBrowse link
G S100a9 S100 calcium binding protein A9 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22577135) MGI
TreeGrafter
PMID:22577135 GO_REF:0000118 NCBI chrNW_004936580:3,228,097...3,230,652
Ensembl chrNW_004936580:3,228,092...3,230,676
JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095
JBrowse link
G Tspan2 tetraspanin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chrNW_004936627:410,280...438,922
Ensembl chrNW_004936627:407,033...453,776
JBrowse link
G Vim vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11487638) Ensembl
MGI
PMID:11487638 GO_REF:0000107 NCBI chrNW_004936520:10,051,692...10,059,324
Ensembl chrNW_004936520:10,052,012...10,059,182
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ISO RGD PMID:17141959 RGD:2303044 NCBI chrNW_004936501:3,400,971...3,467,061
Ensembl chrNW_004936501:3,401,285...3,470,460
JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chrNW_004936469:55,639,345...55,699,330
Ensembl chrNW_004936469:55,639,068...55,699,640
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:15882580) Ensembl
MGI
PMID:15882580 GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Cul4b cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:9,490,717...9,535,998
Ensembl chrNW_004936479:9,479,133...9,534,262
JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:18848628) Ensembl
MGI
PMID:18848628 GO_REF:0000107 NCBI chrNW_004936522:3,498,395...4,612,560
Ensembl chrNW_004936522:4,333,647...4,616,044
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,716,333...5,724,869
Ensembl chrNW_004936578:5,715,512...5,725,096
JBrowse link
G Eomes eomesodermin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004936477:21,591,772...21,606,289
Ensembl chrNW_004936477:21,591,792...21,606,296
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (PMID:15234344) MGI PMID:15234344 NCBI chrNW_004936536:2,995,654...3,091,079 JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chrNW_004936542:4,037,888...4,046,089
Ensembl chrNW_004936542:4,037,201...4,050,810
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chrNW_004936532:5,236,175...5,238,689
Ensembl chrNW_004936532:5,236,037...5,238,881
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16111892) Ensembl
MGI
PMID:16111892 GO_REF:0000107 NCBI chrNW_004936492:6,160,979...6,657,491
Ensembl chrNW_004936492:6,289,517...6,659,465
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chrNW_004936904:410,043...413,256
Ensembl chrNW_004936904:410,043...413,257
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chrNW_004936642:2,745,889...2,833,286
Ensembl chrNW_004936642:2,801,908...2,832,830
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004936493:14,618,176...14,624,201
Ensembl chrNW_004936493:14,618,060...14,624,315
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12111813) Ensembl
MGI
PMID:12111813 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:10442636), (PMID:9878702)
(PMID:11297510)
Ensembl
MGI
PMID:9878702 PMID:10442636 PMID:11297510 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:29106906)
MGI PMID:21800304 PMID:29106906 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Nkx2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19258013) Ensembl
MGI
PMID:19258013 GO_REF:0000107 NCBI chrNW_004936620:3,961,106...3,962,910
Ensembl chrNW_004936620:3,961,106...3,969,503
JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:14702088) Ensembl
MGI
PMID:14702088 GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19258013) RGD
MGI
Ensembl
PMID:19258013 PMID:22944581 GO_REF:0000107 RGD:8552357 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10357934) Ensembl
MGI
PMID:10357934 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Sox6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chrNW_004936528:2,331,706...2,912,423
Ensembl chrNW_004936528:2,331,661...2,906,082
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402
JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15590934) Ensembl
MGI
PMID:15590934 GO_REF:0000107 NCBI chrNW_004936486:6,972,972...6,978,544
Ensembl chrNW_004936486:6,974,662...6,978,542
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO (PMID:14573516) MGI PMID:14573516 NCBI chrNW_004936476:7,724,666...7,738,401 JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chrNW_004936501:128,386...132,648
Ensembl chrNW_004936501:127,703...132,704
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20980600) Ensembl
MGI
PMID:20980600 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004936481:9,823,790...9,847,291
Ensembl chrNW_004936481:9,824,392...9,847,104
JBrowse link
G Gfap glial fibrillary acidic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10816608) Ensembl
MGI
PMID:10816608 GO_REF:0000107 NCBI chrNW_004936541:1,265,915...1,275,232
Ensembl chrNW_004936541:1,265,436...1,275,296
JBrowse link
G Gpr37l1 G protein-coupled receptor 37 like 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:24062445) Ensembl
MGI
PMID:24062445 GO_REF:0000107 NCBI chrNW_004936567:2,408,326...2,414,411
Ensembl chrNW_004936567:2,407,339...2,414,437
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21319224) Ensembl
MGI
PMID:21319224 GO_REF:0000107 NCBI chrNW_004936522:4,992,333...5,074,295
Ensembl chrNW_004936522:4,992,322...5,074,313
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10375501) Ensembl
MGI
PMID:10375501 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chrNW_004936469:13,365,168...13,454,340
Ensembl chrNW_004936469:13,365,087...13,454,340
JBrowse link
G Vim vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10816608) Ensembl
MGI
PMID:10816608 GO_REF:0000107 NCBI chrNW_004936520:10,051,692...10,059,324
Ensembl chrNW_004936520:10,052,012...10,059,182
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis associated tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22573681) MGI
TreeGrafter
PMID:22573681 GO_REF:0000118 NCBI chrNW_004936594:4,863,489...4,896,424
Ensembl chrNW_004936594:4,865,537...4,896,430
JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,628,649...1,635,599
Ensembl chrNW_004936569:1,625,374...1,635,694
JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004936538:6,674,595...6,819,511
Ensembl chrNW_004936538:6,674,907...6,816,674
JBrowse link
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:20147288 RGD:405855864 NCBI chrNW_004936543:856,678...862,080
Ensembl chrNW_004936543:856,676...862,109
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,653,233...9,683,258
Ensembl chrNW_004936475:9,671,868...9,681,988
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Aim2 absent in melanoma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:1,447,869...1,460,836
Ensembl chrNW_004936740:1,451,001...1,460,836
JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:21746835)
(PMID:18776131)
MGI PMID:18776131 PMID:21746835 NCBI chrNW_004936604:680,237...742,580
Ensembl chrNW_004936604:680,329...742,284
JBrowse link
G Alk ALK receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17487225) Ensembl
MGI
PMID:17487225 GO_REF:0000107 NCBI chrNW_004936493:3,624,288...3,671,567
Ensembl chrNW_004936493:3,028,608...3,671,874
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936704:992,858...998,200
Ensembl chrNW_004936704:991,306...998,198
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:5,157,076...5,160,251
Ensembl chrNW_004936512:5,157,175...5,159,818
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:1,331,610...1,335,058
Ensembl chrNW_004936529:1,332,874...1,334,403
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,365,729...3,391,292
Ensembl chrNW_004936558:3,363,807...3,391,438
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9753321) Ensembl
MGI
PMID:9753321 GO_REF:0000107 NCBI chrNW_004936492:14,818,561...14,902,231
Ensembl chrNW_004936492:14,816,623...14,902,132
JBrowse link
G Apod apolipoprotein D involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936833:260,798...277,060
Ensembl chrNW_004936833:259,660...277,246
JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chrNW_004936666:3,077,006...3,102,469
Ensembl chrNW_004936666:3,076,778...3,103,649
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:20,041,712...20,218,853
Ensembl chrNW_004936483:20,041,657...20,218,965
JBrowse link
G Aspm assembly factor for spindle microtubules involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20823249) Ensembl
MGI
PMID:20823249 GO_REF:0000107 NCBI chrNW_004936567:6,653,382...6,701,856
Ensembl chrNW_004936567:6,653,728...6,701,752
JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chrNW_004936687:1,435,977...1,437,138
Ensembl chrNW_004936687:1,436,009...1,437,067
JBrowse link
G Atxn1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004936552:2,498,711...2,521,225
Ensembl chrNW_004936552:2,505,238...2,521,231
JBrowse link
G Atxn1l ataxin 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:21,941,682...21,953,071
Ensembl chrNW_004936475:21,941,684...21,953,105
JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chrNW_004936472:25,909,994...25,991,800
Ensembl chrNW_004936472:25,942,662...26,006,288
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chrNW_004936474:25,298,806...25,308,369
Ensembl chrNW_004936474:25,298,806...25,308,900
JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22228099) Ensembl
MGI
PMID:22228099 GO_REF:0000107 NCBI chrNW_004936662:1,081,237...1,116,719
Ensembl chrNW_004936662:1,080,295...1,116,636
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11684658) Ensembl
MGI
PMID:11684658 GO_REF:0000107 NCBI chrNW_004936619:288,377...432,297
Ensembl chrNW_004936619:288,340...432,315
JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO (MGI:5544381|PMID:24074871)
(PMID:24074871)
UniProt PMID:24074871 MGI:5544381 NCBI chrNW_004936580:5,480,023...5,482,288
Ensembl chrNW_004936580:5,481,355...5,482,155
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7926765) Ensembl
MGI
PMID:7926765 GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:5,261,899...5,396,930
Ensembl chrNW_004936541:5,262,773...5,395,519
JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:7,845,799...8,019,167
Ensembl chrNW_004936487:7,845,351...8,019,190
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19004860) Ensembl
MGI
PMID:19004860 GO_REF:0000107 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:8,020,525...8,204,992
Ensembl chrNW_004936509:8,020,170...8,204,871
JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:29317443) MGI PMID:29317443 NCBI chrNW_004936566:2,610,756...2,663,657 JBrowse link
G Cdh2 cadherin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936550:6,885,484...7,067,001
Ensembl chrNW_004936550:6,886,706...6,945,056
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:2,411,194...2,415,106
Ensembl chrNW_004936538:2,413,967...2,414,890
JBrowse link
G Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936569:1,381,101...1,383,593
Ensembl chrNW_004936569:1,381,262...1,382,365
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:8,900,375...9,081,547
Ensembl chrNW_004936487:8,900,530...9,081,527
JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO (PMID:15248193) MGI PMID:15248193 NCBI chrNW_004936596:2,442,978...2,467,184
Ensembl chrNW_004936596:2,442,991...2,467,184
JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) MGI PMID:31004071 NCBI chrNW_004936600:1,954,987...2,042,834 JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27602517) Ensembl
MGI
PMID:27602517 GO_REF:0000107 NCBI chrNW_004936880:546,250...608,061
Ensembl chrNW_004936880:546,236...608,080
JBrowse link
G Cic capicua transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:216,394...243,361
Ensembl chrNW_004936706:212,833...242,756
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967
JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,283,016...4,291,968
Ensembl chrNW_004936511:4,283,009...4,292,376
JBrowse link
G Cntn1 contactin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936607:8,430...291,964
Ensembl chrNW_004936607:23,150...292,013
JBrowse link
G Cntn2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:7,297,429...7,320,666
Ensembl chrNW_004936557:7,297,422...7,320,846
JBrowse link
G Cntn4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chrNW_004936577:2,298,648...2,768,864
Ensembl chrNW_004936577:2,355,237...2,770,349
JBrowse link
G Cntn5 contactin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936551:7,097,064...7,571,894
Ensembl chrNW_004936551:7,098,632...7,804,064
JBrowse link
G Cntn6 contactin 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936577:1,108,502...1,393,706
Ensembl chrNW_004936577:1,167,211...1,393,521
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,416,043...2,543,561
Ensembl chrNW_004936472:2,416,566...2,542,814
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:342,964...360,890
Ensembl chrNW_004936677:343,042...360,879
JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chrNW_004936482:14,902,011...14,952,123
Ensembl chrNW_004936482:14,902,011...14,952,123
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:28,508,726...28,535,640
Ensembl chrNW_004936473:28,510,523...28,535,627
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chrNW_004936617:4,224,131...4,239,080
Ensembl chrNW_004936617:4,224,131...4,238,796
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12183377) MGI
TreeGrafter
PMID:12183377 GO_REF:0000118 NCBI chrNW_004936469:39,794,613...39,798,448
Ensembl chrNW_004936469:39,794,584...39,798,459
JBrowse link
G Dclk1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chrNW_004936472:29,958,716...30,287,798
Ensembl chrNW_004936472:29,964,218...30,287,841
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508
JBrowse link
G Ddit4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chrNW_004936521:6,646,864...6,648,982
Ensembl chrNW_004936521:6,646,797...6,648,983
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:418,998...441,637
Ensembl chrNW_004936558:418,983...444,538
JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chrNW_004936504:12,548,452...12,645,236
Ensembl chrNW_004936504:12,548,452...12,643,399
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:27,504,419...27,529,196
Ensembl chrNW_004936474:27,500,669...27,529,205
JBrowse link
G Dmxl2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004936471:13,330,870...13,483,610
Ensembl chrNW_004936471:13,329,622...13,483,937
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,895,771...2,897,761
Ensembl chrNW_004936543:2,897,068...2,897,745
JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,619,910...2,939,578
Ensembl chrNW_004936542:2,620,469...2,939,578
JBrowse link
G Eml1 EMAP like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936604:3,498,413...3,662,188
Ensembl chrNW_004936604:3,498,304...3,662,244
JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12561075)
(PMID:12091317)
Ensembl
MGI
PMID:12091317 PMID:12561075 GO_REF:0000107 NCBI chrNW_004936491:16,745,310...16,762,422
Ensembl chrNW_004936491:16,745,310...16,762,422
JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12196586), (PMID:12209834), (PMID:12561075)
(PMID:12091317)
Ensembl
MGI
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000107 NCBI chrNW_004936486:7,313,689...7,319,971
Ensembl chrNW_004936486:7,313,190...7,319,995
JBrowse link
G Eomes eomesodermin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179
JBrowse link
G Epha7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936812:698,548...865,589
Ensembl chrNW_004936812:698,533...865,481
JBrowse link
G Epor erythropoietin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11807041) Ensembl
MGI
PMID:11807041 GO_REF:0000107 NCBI chrNW_004936659:1,468,391...1,473,880
Ensembl chrNW_004936659:1,468,634...1,473,880
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357
JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:14605369) Ensembl
MGI
PMID:14605369 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12682014) Ensembl
MGI
PMID:12682014 GO_REF:0000107 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Fkrp fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834)
(PMID:23591631)
(PMID:20675713)
Ensembl
MGI
PMID:20675713 PMID:23591631 PMID:26306834 GO_REF:0000107 NCBI chrNW_004936664:577,109...586,848
Ensembl chrNW_004936664:578,126...586,795
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004936559:6,612,318...6,680,690
Ensembl chrNW_004936559:6,619,531...6,670,727
Ensembl chrNW_004936559:6,619,531...6,670,727
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chrNW_004936488:4,653,891...4,713,982
Ensembl chrNW_004936488:4,653,692...4,712,313
JBrowse link
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,284,799...1,288,898
Ensembl chrNW_004936594:1,284,781...1,289,361
JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chrNW_004936542:3,943,174...3,951,473
Ensembl chrNW_004936542:3,943,174...3,951,473
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chrNW_004936471:39,791,633...40,193,049
Ensembl chrNW_004936471:39,791,613...40,187,923
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:5,684,660...5,694,779
Ensembl chrNW_004936538:5,684,644...5,695,043
JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936769:1,529,983...1,574,805
Ensembl chrNW_004936769:1,527,151...1,574,892
JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435361), (PMID:17395647)
(PMID:8026071)
Ensembl
MGI
PMID:8026071 PMID:12435361 PMID:17395647 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:835,886...1,224,450
Ensembl chrNW_004936484:836,700...1,226,162
JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21377456) Ensembl
MGI
PMID:21377456 GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844
JBrowse link
G Gsx2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12930780) Ensembl
MGI
PMID:12930780 GO_REF:0000107 NCBI chrNW_004936482:16,703,936...16,706,224
Ensembl chrNW_004936482:16,704,193...16,705,729
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chrNW_004936471:24,142,227...24,330,966
Ensembl chrNW_004936471:24,141,928...24,330,967
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950
JBrowse link
G Hesx1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11291863) Ensembl
MGI
PMID:11291863 GO_REF:0000107 NCBI chrNW_004936473:7,545,982...7,572,222
Ensembl chrNW_004936473:7,545,839...7,548,013
JBrowse link
G Hmx2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chrNW_004936486:11,789,991...11,792,500
Ensembl chrNW_004936486:11,789,991...11,792,068
JBrowse link
G Hmx3 H6 family homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chrNW_004936486:11,778,408...11,780,108
Ensembl chrNW_004936486:11,778,325...11,780,395
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chrNW_004936831:951,603...976,159
Ensembl chrNW_004936831:951,562...977,208
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chrNW_004936474:7,407,622...7,478,950
Ensembl chrNW_004936474:7,408,518...7,467,851
JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chrNW_004936475:22,523,962...22,836,355 JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18930042) Ensembl
MGI
PMID:18930042 GO_REF:0000107 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:22228099)
(PMID:19036983)
MGI PMID:19036983 PMID:22228099 NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748
JBrowse link
G Igf1r insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004936472:2,772,187...2,796,398 JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23906841) Ensembl
TreeGrafter
MGI
PMID:23906841 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:7,432,184...7,495,122
Ensembl chrNW_004936542:7,432,151...7,495,318
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chrNW_004936514:10,735,247...10,787,682
Ensembl chrNW_004936514:10,735,809...10,787,678
JBrowse link
G Kdm4b lysine demethylase 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,908,970...3,005,625
Ensembl chrNW_004936588:2,908,899...3,005,674
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004936567:3,346,655...3,394,656
Ensembl chrNW_004936567:3,346,217...3,395,258
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834), (PMID:29360985)
(PMID:29360985)
Ensembl
MGI
PMID:26306834 PMID:29360985 GO_REF:0000107 NCBI chrNW_004936492:6,160,979...6,657,491
Ensembl chrNW_004936492:6,289,517...6,659,465
JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14566948), (PMID:15295034) Ensembl
MGI
PMID:14566948 PMID:15295034 GO_REF:0000107 NCBI chrNW_004936487:12,395,817...12,413,860
Ensembl chrNW_004936487:12,395,812...12,414,003
JBrowse link
G LOC101956559 core histone macro-H2A.2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,474,408...8,509,269
Ensembl chrNW_004936521:8,473,794...8,509,268
JBrowse link
G LOC101958033 uncharacterized LOC101958033 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chrNW_004936653:3,268,229...3,543,173 JBrowse link
G LOC101959799 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5297001|PMID:21966978) UniProt PMID:21966978 MGI:5297001 NCBI chrNW_004937109:142,711...144,257
Ensembl chrNW_004937109:142,711...144,198
JBrowse link
G LOC101960318 dynein regulatory complex subunit 4 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chrNW_004936641:92,893...109,006 JBrowse link
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
G Maco1 macoilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,105,870...10,155,029
Ensembl chrNW_004936474:10,105,359...10,155,133
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:3,917,060...5,859,527
Ensembl chrNW_004936485:3,919,525...5,859,251
JBrowse link
G Map1s microtubule associated protein 1S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:3,286,031...3,296,855
Ensembl chrNW_004936596:3,286,119...3,296,852
JBrowse link
G Mast1 microtubule associated serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,919,191...1,943,440
Ensembl chrNW_004936659:1,918,420...1,946,087
JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,648,565...17,656,445
Ensembl chrNW_004936475:17,649,551...17,657,292
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chrNW_004936476:21,790,058...21,843,744
Ensembl chrNW_004936476:21,790,051...21,847,558
JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18571096) Ensembl
MGI
PMID:18571096 GO_REF:0000107 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839
JBrowse link
G Med1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10882104) Ensembl
MGI
PMID:10882104 GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802
JBrowse link
G Meis1 Meis homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:11,079,574...11,216,451
Ensembl chrNW_004936491:11,079,455...11,217,388
JBrowse link
G Meis2 Meis homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:800,510...1,006,054
Ensembl chrNW_004936471:798,739...1,006,047
JBrowse link
G Meis3 Meis homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936664:1,095,815...1,105,751
Ensembl chrNW_004936664:1,095,772...1,105,808
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chrNW_004936589:2,280,803...2,390,179
Ensembl chrNW_004936589:2,280,799...2,390,179
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26005865), (PMID:26005868)
(MGI:6196220|PMID:30074985)
Ensembl
ARUK-UCL
PMID:26005865 PMID:26005868 PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chrNW_004936474:21,790,807...21,803,336
Ensembl chrNW_004936474:21,790,747...21,803,360
JBrowse link
G Mink1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chrNW_004936677:2,813,899...2,864,366
Ensembl chrNW_004936677:2,813,899...2,864,366
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004936595:1,697,283...1,832,571
Ensembl chrNW_004936595:1,694,102...1,832,364
JBrowse link
G Napa NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11706940) Ensembl
MGI
PMID:11706940 GO_REF:0000107 NCBI chrNW_004936664:1,155,557...1,178,626
Ensembl chrNW_004936664:1,155,557...1,178,631
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chrNW_004936561:5,905,905...5,982,824
Ensembl chrNW_004936561:5,906,485...5,982,268
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28916769) Ensembl
MGI
PMID:28916769 GO_REF:0000107 NCBI chrNW_004936480:13,829,093...13,932,202
Ensembl chrNW_004936480:13,827,743...13,932,238
JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chrNW_004936591:112,864...903,598
Ensembl chrNW_004936591:113,013...899,271
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10419687) Ensembl
MGI
PMID:10419687 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23863479) Ensembl
MGI
PMID:23863479 GO_REF:0000107 NCBI chrNW_004936657:3,536,212...3,622,999
Ensembl chrNW_004936657:3,536,141...3,623,821
JBrowse link
G Nfasc neurofascin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:7,345,813...7,437,654
Ensembl chrNW_004936557:7,350,114...7,437,722
JBrowse link
G Nfib nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8557195)
(PMID:12930780)
Ensembl
MGI
PMID:8557195 PMID:12930780 GO_REF:0000107 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004936481:17,280,661...17,438,496
Ensembl chrNW_004936481:17,280,464...17,438,084
JBrowse link
G Nnat neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936561:3,739,664...3,744,015
Ensembl chrNW_004936561:3,739,664...3,742,154
JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11311163) Ensembl
MGI
PMID:11311163 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12397106) Ensembl
MGI
PMID:12397106 GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Noto notochord homeobox involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:16,987,797...16,996,423
Ensembl chrNW_004936491:16,987,642...16,996,579
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14994267) Ensembl
MGI
PMID:14994267 GO_REF:0000107 NCBI chrNW_004936564:4,432,556...4,453,056
Ensembl chrNW_004936564:4,432,485...4,453,486
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936653:1,167,055...1,238,241
Ensembl chrNW_004936653:1,169,177...1,238,140
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chrNW_004936709:2,163,510...2,223,429
Ensembl chrNW_004936709:2,163,334...2,223,552
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31383820) Ensembl
MGI
PMID:31383820 GO_REF:0000107 NCBI chrNW_004936659:1,491,598...1,501,245
Ensembl chrNW_004936659:1,491,831...1,500,843
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(PMID:27486780) Ensembl
MGI
PMID:27486780 GO_REF:0000107 NCBI chrNW_004936490:16,808,659...16,832,814
Ensembl chrNW_004936490:16,808,650...16,832,867
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10409504), (PMID:12196586) Ensembl
MGI
PMID:10409504 PMID:12196586 GO_REF:0000107 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075
JBrowse link
G Pbx1 PBX homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629
JBrowse link
G Pbx2 PBX homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,413,063...1,418,304
Ensembl chrNW_004936727:1,412,632...1,419,438
JBrowse link
G Pbx3 PBX homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:13,779,999...13,986,617
Ensembl chrNW_004936487:13,779,454...13,987,722
JBrowse link
G Pbx4 PBX homeobox 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:1,879,198...1,911,336
Ensembl chrNW_004936596:1,879,198...1,908,483
JBrowse link
G Pcdh18 protocadherin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936770:478,480...491,786
Ensembl chrNW_004936770:478,405...491,786
JBrowse link
G Plxnb2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:521,981...539,475
Ensembl chrNW_004936629:525,649...538,743
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834) Ensembl
MGI
PMID:26306834 GO_REF:0000107 NCBI chrNW_004936474:27,229,262...27,239,034
Ensembl chrNW_004936474:27,229,113...27,239,123
JBrowse link
G Pomk protein O-mannose kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chrNW_004936570:335,668...354,839
Ensembl chrNW_004936570:331,211...347,631
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936651:494,182...497,109
Ensembl chrNW_004936651:493,467...494,832
JBrowse link
G Pou3f4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936547:4,454,239...4,455,460
Ensembl chrNW_004936547:4,454,297...4,455,382
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9153393) Ensembl
MGI
PMID:9153393 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
G Pygo2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17425782) Ensembl
MGI
PMID:17425782 GO_REF:0000107 NCBI chrNW_004936580:4,506,982...4,511,044
Ensembl chrNW_004936580:4,507,925...4,511,107
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:802,753...810,270
Ensembl chrNW_004936529:802,759...810,265
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,642,240...40,727,831
Ensembl chrNW_004936469:40,641,928...40,727,837
JBrowse link
G Rax retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15789424) Ensembl
MGI
PMID:15789424 GO_REF:0000107 NCBI chrNW_004936497:5,451,055...5,457,334
Ensembl chrNW_004936497:5,452,800...5,456,905
JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chrNW_004936479:19,628,488...20,088,278
Ensembl chrNW_004936479:19,628,940...20,087,250
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chrNW_004936505:5,544,011...6,747,417
Ensembl chrNW_004936505:5,548,164...6,094,225
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:38172607) Ensembl
MGI
PMID:38172607 GO_REF:0000107 NCBI chrNW_004936530:4,756,069...4,761,484
Ensembl chrNW_004936530:4,753,751...4,761,695
JBrowse link
G Rpgrip1l RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17553904), (PMID:17558409) Ensembl
MGI
PMID:17553904 PMID:17558409 GO_REF:0000107 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618
JBrowse link
G Rtn1 reticulon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936495:3,933,652...4,158,269
Ensembl chrNW_004936495:3,933,605...4,158,571
JBrowse link
G Rtn4 reticulon 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chrNW_004936748:1,244,962...1,250,093
Ensembl chrNW_004936748:1,245,538...1,250,093
JBrowse link
G Sct secretin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936888:459,168...459,919
Ensembl chrNW_004936888:459,247...459,911
JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,502,854...13,564,886
Ensembl chrNW_004936492:13,501,663...13,564,867
JBrowse link
G Selenop selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chrNW_004936518:155,905...166,932 JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chrNW_004936490:4,597,888...4,609,905 JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,339,426...13,363,551
Ensembl chrNW_004936501:13,341,511...13,363,545
JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) UniProt PMID:16249884 NCBI chrNW_004936721:2,068,731...2,166,537 JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12569128) MGI
TreeGrafter
PMID:12569128 GO_REF:0000118 NCBI chrNW_004936508:7,103,578...7,106,588
Ensembl chrNW_004936508:7,104,066...7,107,597
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721
JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:8,457,779...8,471,244
Ensembl chrNW_004936531:8,457,957...8,471,258
JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:1,606,418...1,654,026
Ensembl chrNW_004936704:1,622,504...1,654,026
JBrowse link
G Slc7a11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17035536) Ensembl
MGI
PMID:17035536 GO_REF:0000107 NCBI chrNW_004936535:9,177,305...9,242,743
Ensembl chrNW_004936535:9,177,143...9,242,566
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22516202) Ensembl
MGI
PMID:22516202 GO_REF:0000107 NCBI chrNW_004936479:2,030,788...2,110,501
Ensembl chrNW_004936479:2,030,716...2,110,661
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:908,471...929,075
Ensembl chrNW_004936706:908,867...929,305
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:2,331,706...2,912,423
Ensembl chrNW_004936528:2,331,661...2,906,082
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
JBrowse link
G Sphk2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587
JBrowse link
G Stk36 serine/threonine kinase 36 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chrNW_004936569:1,115,790...1,143,450
Ensembl chrNW_004936569:1,115,768...1,143,370
JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15690082) Ensembl
MGI
PMID:15690082 GO_REF:0000107 NCBI chrNW_004936704:330,195...396,913
Ensembl chrNW_004936704:330,078...397,059
JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chrNW_004936474:24,128,633...24,135,231
Ensembl chrNW_004936474:24,126,278...24,135,237
JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:2,977,477...3,049,209
Ensembl chrNW_004936630:2,978,138...3,036,161
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Tmx2 thioredoxin related transmembrane protein 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:4,818,626...4,830,878
Ensembl chrNW_004936581:4,818,264...4,831,575
JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,404,651...19,423,601
Ensembl chrNW_004936486:19,402,526...19,421,976
JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11406614), (PMID:19286674) Ensembl
MGI
PMID:11406614 PMID:19286674 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:449,042...462,727
Ensembl chrNW_004936903:449,039...462,727
JBrowse link
G Ufm1 ubiquitin fold modifier 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937057:143,001...153,873
Ensembl chrNW_004937057:142,995...153,873
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,773,910...8,834,984
Ensembl chrNW_004936491:8,773,892...8,837,661
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chrNW_004936473:30,034,159...30,536,450
Ensembl chrNW_004936473:30,038,164...30,536,567
JBrowse link
G Unc5c unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9126743)
(PMID:1401878), (PMID:9550145)
(PMID:10818148)
Ensembl
MGI
PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 GO_REF:0000107 NCBI chrNW_004936687:2,600,635...2,951,407
Ensembl chrNW_004936687:2,607,112...2,756,094
JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of
IEA
ISO
(PMID:23821644) Ensembl
MGI
PMID:23821644 GO_REF:0000107 NCBI chrNW_004936479:10,093,290...10,111,293
Ensembl chrNW_004936479:10,093,290...10,111,752
JBrowse link
G Utp3 UTP3 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:4,071,716...4,074,139
Ensembl chrNW_004936598:4,072,533...4,073,981
JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10601036)
(PMID:10601035)
Ensembl
TreeGrafter
MGI
PMID:10601035 PMID:10601036 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936486:6,972,972...6,978,544
Ensembl chrNW_004936486:6,974,662...6,978,542
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:15,079,446...15,110,238
Ensembl chrNW_004936491:15,078,598...15,111,252
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chrNW_004936470:43,281,905...43,952,523
Ensembl chrNW_004936470:43,281,469...43,951,805
JBrowse link
G Wdr47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chrNW_004936704:543,189...603,488
Ensembl chrNW_004936704:543,196...603,488
JBrowse link
G Zic1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:7,997,824...8,001,614
Ensembl chrNW_004936519:7,994,455...8,002,487
JBrowse link
G Znf335 zinc finger protein 335 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936514:7,070,030...7,090,466
Ensembl chrNW_004936514:7,072,554...7,090,183
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chrNW_004936489:16,878,423...16,971,229
Ensembl chrNW_004936489:16,878,321...16,971,311
JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15713641) Ensembl
MGI
PMID:15713641 GO_REF:0000107 NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chrNW_004936599:3,059,274...3,076,853
Ensembl chrNW_004936599:3,059,148...3,076,299
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chrNW_004936475:8,785,914...8,810,490
Ensembl chrNW_004936475:8,785,154...8,810,541
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583) Ensembl
MGI
PMID:25100583 GO_REF:0000107 NCBI chrNW_004936550:6,885,484...7,067,001
Ensembl chrNW_004936550:6,886,706...6,945,056
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chrNW_004936556:5,205,481...6,271,304 JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23178126)
(PMID:25100583)
Ensembl
MGI
PMID:23178126 PMID:25100583 GO_REF:0000107 NCBI chrNW_004936491:16,745,310...16,762,422
Ensembl chrNW_004936491:16,745,310...16,762,422
JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chrNW_004936626:3,980,311...4,147,042
Ensembl chrNW_004936626:3,982,647...4,159,976
JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chrNW_004936602:3,162,177...3,220,468
Ensembl chrNW_004936602:3,161,960...3,209,868
JBrowse link
G Foxo3 forkhead box O3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17954912) Ensembl
MGI
PMID:17954912 GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G Mkks MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chrNW_004936485:9,089,118...9,114,396
Ensembl chrNW_004936485:9,088,963...9,115,175
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:8,612,142...8,693,698
Ensembl chrNW_004936538:8,612,049...8,694,015
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004936778:149,844...248,905
Ensembl chrNW_004936778:149,177...247,357
JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17614943) Ensembl
MGI
PMID:17614943 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:114,175...168,697
Ensembl chrNW_004936629:114,850...167,505
JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18165320) Ensembl
MGI
PMID:18165320 GO_REF:0000107 NCBI chrNW_004936469:17,068,179...17,349,563
Ensembl chrNW_004936469:17,068,175...17,349,782
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:6,205,268...6,239,062
Ensembl chrNW_004936538:6,205,251...6,239,083
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chrNW_004936518:5,901,076...6,072,012
Ensembl chrNW_004936518:5,921,508...6,071,931
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,258,239...4,274,823
Ensembl chrNW_004936599:4,258,239...4,274,831
JBrowse link
G Znf335 zinc finger protein 335 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23178126) Ensembl
MGI
PMID:23178126 GO_REF:0000107 NCBI chrNW_004936514:7,070,030...7,090,466
Ensembl chrNW_004936514:7,072,554...7,090,183
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7903221) Ensembl
MGI
PMID:7903221 GO_REF:0000107 NCBI chrNW_004936753:1,958,250...1,962,640
Ensembl chrNW_004936753:1,958,264...1,962,640
JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9367425) Ensembl
MGI
PMID:9367425 GO_REF:0000107 NCBI chrNW_004936478:3,729,079...3,731,353
Ensembl chrNW_004936478:3,729,107...3,730,870
JBrowse link
G Mafb MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7925021) Ensembl
MGI
PMID:7925021 GO_REF:0000107 NCBI chrNW_004936561:1,007,273...1,010,548
Ensembl chrNW_004936561:1,007,647...1,008,618
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:18579678) Ensembl
MGI
PMID:18579678 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004936563:3,348,052...3,350,623
Ensembl chrNW_004936563:3,348,052...3,350,623
JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15548218) Ensembl
MGI
PMID:15548218 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:4,120,162...4,661,258
Ensembl chrNW_004936589:4,123,182...4,382,005
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Phox2b paired like homeobox 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17922007) Ensembl
MGI
PMID:17922007 GO_REF:0000107 NCBI chrNW_004936482:8,972,433...8,975,284
Ensembl chrNW_004936482:8,972,433...8,975,284
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936654:1,139,500...1,143,477
Ensembl chrNW_004936654:1,139,500...1,143,477
JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:20,934,524...20,935,584
Ensembl chrNW_004936471:20,934,580...20,935,557
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix-loop-helix 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3723363|PMID:17573818) UniProt
Ensembl
PMID:17573818 GO_REF:0000107 MGI:3723363 NCBI chrNW_004936627:1,130,064...1,135,092
Ensembl chrNW_004936627:1,131,807...1,135,012
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8955272) Ensembl
MGI
PMID:8955272 GO_REF:0000107 NCBI chrNW_004936511:2,857,017...2,859,705
Ensembl chrNW_004936511:2,857,331...2,859,277
JBrowse link
G Sema4c semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:794,127...804,618
Ensembl chrNW_004936744:793,898...804,642
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:25099998) Ensembl
MGI
PMID:25099998 GO_REF:0000107 NCBI chrNW_004936501:3,063,861...3,142,680
Ensembl chrNW_004936501:3,063,617...3,143,028
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10970885) Ensembl
MGI
PMID:10970885 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15677725) Ensembl
MGI
PMID:15677725 GO_REF:0000107 NCBI chrNW_004936836:295,090...306,756
Ensembl chrNW_004936836:295,664...306,756
JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004936484:19,151,752...19,237,435 JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:2,440,357...2,518,596
Ensembl chrNW_004936612:2,443,525...2,517,114
JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10729342) Ensembl
MGI
PMID:10729342 GO_REF:0000107 NCBI chrNW_004936486:7,313,689...7,319,971
Ensembl chrNW_004936486:7,313,190...7,319,995
JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chrNW_004936802:1,092,448...1,096,293
Ensembl chrNW_004936802:1,092,404...1,101,672
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16613831) Ensembl
MGI
PMID:16613831 GO_REF:0000107 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G Lhx5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10325223) Ensembl
MGI
PMID:10325223 GO_REF:0000107 NCBI chrNW_004936668:3,246,456...3,255,353
Ensembl chrNW_004936668:3,246,456...3,255,353
JBrowse link
G Ncor2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chrNW_004936558:658,723...775,263
Ensembl chrNW_004936558:677,610...775,288
JBrowse link
G Nfib nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chrNW_004936627:635,784...641,290
Ensembl chrNW_004936627:635,788...645,364
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chrNW_004936498:815,401...848,749
Ensembl chrNW_004936498:815,399...848,793
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chrNW_004936508:7,103,578...7,106,588
Ensembl chrNW_004936508:7,104,066...7,107,597
JBrowse link
G Wnt3a Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423
JBrowse link
G Wnt7a Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004936629:3,869,976...3,907,932
Ensembl chrNW_004936629:3,869,523...3,909,808
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chrNW_004936675:1,275,500...1,334,878
Ensembl chrNW_004936675:1,275,470...1,333,540
JBrowse link
G Fzd6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chrNW_004936470:40,416,254...40,454,717
Ensembl chrNW_004936470:40,416,014...40,454,062
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
G Wnt2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:1,825,209...1,866,898
Ensembl chrNW_004936589:1,825,209...1,866,889
JBrowse link
G Wnt3a Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15091337) Ensembl
MGI
PMID:15091337 GO_REF:0000107 NCBI chrNW_004936522:3,498,395...4,612,560
Ensembl chrNW_004936522:4,333,647...4,616,044
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:920,830...1,108,374
Ensembl chrNW_004936491:956,986...1,108,640
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16357211) Ensembl
MGI
PMID:16357211 GO_REF:0000107 NCBI chrNW_004936558:3,552,909...3,581,212
Ensembl chrNW_004936558:3,552,864...3,581,368
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,206,226...7,232,798
Ensembl chrNW_004936502:7,206,172...7,233,912
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:28,508,726...28,535,640
Ensembl chrNW_004936473:28,510,523...28,535,627
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:4,065,767...5,100,690
Ensembl chrNW_004936586:4,066,498...5,100,035
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chrNW_004936562:2,269,341...2,369,098
Ensembl chrNW_004936562:2,269,332...2,371,224
JBrowse link
G Cntn1 contactin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:8,430...291,964
Ensembl chrNW_004936607:23,150...292,013
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17952069) Ensembl
MGI
PMID:17952069 GO_REF:0000107 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Mag myelin associated glycoprotein involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Mios meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:2,296,713...2,331,737
Ensembl chrNW_004936585:2,296,830...2,331,601
JBrowse link
G Mobp myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chrNW_004936473:28,663,986...28,709,394
Ensembl chrNW_004936473:28,689,242...28,697,772
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:7,145,510...7,868,792
Ensembl chrNW_004936498:7,145,483...7,658,860
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18815260)
(PMID:21491498)
Ensembl
MGI
PMID:18815260 PMID:21491498 GO_REF:0000107 NCBI chrNW_004936475:23,625,023...23,675,211
Ensembl chrNW_004936475:23,624,969...23,675,235
JBrowse link
G Myrf myelin regulatory factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:1,335,969...1,367,104
Ensembl chrNW_004936581:1,338,762...1,367,104
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspa aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chrNW_004936677:219,459...232,545 JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chrNW_004936557:7,297,429...7,320,666
Ensembl chrNW_004936557:7,297,422...7,320,846
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,412,837...17,430,123
Ensembl chrNW_004936490:17,412,878...17,429,041
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004936477:21,591,772...21,606,289
Ensembl chrNW_004936477:21,591,792...21,606,296
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17006542) Ensembl
MGI
PMID:17006542 GO_REF:0000107 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950
JBrowse link
G Kcnj10 potassium inwardly rectifying channel subfamily J member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17942730) Ensembl
MGI
PMID:17942730 GO_REF:0000107 NCBI chrNW_004936740:555,948...589,219
Ensembl chrNW_004936740:555,998...586,353
JBrowse link
G Mag myelin associated glycoprotein involved_in ISO (MGI:1202048|PMID:9482783) UniProt PMID:9482783 MGI:1202048 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Mal mal, T cell differentiation protein involved_in
acts_upstream_of
IEA
ISO
(PMID:15337780) Ensembl
MGI
PMID:15337780 GO_REF:0000107 NCBI chrNW_004937185:62,807...68,205
Ensembl chrNW_004937185:63,274...68,187
JBrowse link
G Myrf myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,335,969...1,367,104
Ensembl chrNW_004936581:1,338,762...1,367,104
JBrowse link
G Ncstn nicastrin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27008863) Ensembl
MGI
PMID:27008863 GO_REF:0000107 NCBI chrNW_004936740:285,789...301,918
Ensembl chrNW_004936740:285,657...302,111
JBrowse link
G Nkx6-2 NK6 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15601927) Ensembl
MGI
PMID:15601927 GO_REF:0000107 NCBI chrNW_004936486:19,024,106...19,025,387
Ensembl chrNW_004936486:19,024,263...19,025,390
JBrowse link
G Plp1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1694232) Ensembl
TreeGrafter
MGI
PMID:1694232 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936499:10,534,953...10,553,411
Ensembl chrNW_004936499:10,534,950...10,551,012
JBrowse link
G Sox10 SRY-box transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,173,770...3,183,423
Ensembl chrNW_004936492:3,173,741...3,185,024
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chrNW_004936473:30,034,159...30,536,450
Ensembl chrNW_004936473:30,038,164...30,536,567
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:714,036...788,584
Ensembl chrNW_004936664:713,984...789,344
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15378065) Ensembl
MGI
PMID:15378065 GO_REF:0000107 NCBI chrNW_004936549:2,685,953...2,977,754
Ensembl chrNW_004936549:2,686,941...2,932,203
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (PMID:15208636) MGI PMID:15208636 NCBI chrNW_004936595:1,656,956...1,692,775
Ensembl chrNW_004936595:1,656,956...1,689,322
JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:1,065,375...1,240,909
Ensembl chrNW_004936680:1,065,937...1,240,875
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16469766)
(PMID:15169849)
Ensembl
MGI
PMID:15169849 PMID:16469766 GO_REF:0000107 NCBI chrNW_004936492:11,315,929...11,317,166
Ensembl chrNW_004936492:11,316,417...11,317,166
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:7,845,799...8,019,167
Ensembl chrNW_004936487:7,845,351...8,019,190
JBrowse link
G Btg2 BTG anti-proliferation factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20020054) Ensembl
MGI
PMID:20020054 GO_REF:0000107 NCBI chrNW_004936567:1,310,525...1,314,469
Ensembl chrNW_004936567:1,309,658...1,314,515
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Foxg1 forkhead box G1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16680166) Ensembl
MGI
PMID:16680166 GO_REF:0000107 NCBI chrNW_004936494:3,738,419...3,740,419
Ensembl chrNW_004936494:3,736,120...3,739,498
JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004936482:13,219,962...13,593,868
Ensembl chrNW_004936482:13,220,236...13,586,209
JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9886073) Ensembl
MGI
PMID:9886073 GO_REF:0000107 NCBI chrNW_004936691:650,753...694,362
Ensembl chrNW_004936691:652,769...694,463
JBrowse link
G Lep leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10592285) Ensembl
MGI
PMID:10592285 GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chrNW_004936471:34,657,073...34,729,662
Ensembl chrNW_004936471:34,706,198...34,731,037
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chrNW_004936487:14,513,303...14,587,771
Ensembl chrNW_004936487:14,513,290...14,587,902
JBrowse link
G LOC101957772 BEN domain-containing protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:29,600,130...29,647,142
Ensembl chrNW_004936474:29,599,327...29,647,228
JBrowse link
G Map2 microtubule associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936845:475,406...752,600
Ensembl chrNW_004936845:473,366...545,135
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chrNW_004936563:3,348,052...3,350,623
Ensembl chrNW_004936563:3,348,052...3,350,623
JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:2,261,737...2,282,922
Ensembl chrNW_004936706:2,261,904...2,274,339
JBrowse link
G Npy neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:1,289,437...1,296,819
Ensembl chrNW_004936478:1,290,505...1,296,874
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:10,636,762...10,729,060
Ensembl chrNW_004936495:10,636,670...10,725,647
JBrowse link
G Taok1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,531,639...5,668,119
Ensembl chrNW_004936538:5,531,633...5,659,239
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31537781) Ensembl
MGI
PMID:31537781 GO_REF:0000107 NCBI chrNW_004936542:3,567,469...3,571,393
Ensembl chrNW_004936542:3,566,876...3,571,504
JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18215621) Ensembl
MGI
PMID:18215621 GO_REF:0000107 NCBI chrNW_004936604:3,023,781...3,110,104
Ensembl chrNW_004936604:3,023,844...3,110,083
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chrNW_004936687:2,346,601...2,595,283
Ensembl chrNW_004936687:2,503,777...2,597,522
JBrowse link
G Brinp2 BMP/retinoic acid inducible neural specific 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:11,358,832...11,455,104
Ensembl chrNW_004936481:11,356,608...11,455,125
JBrowse link
G Brinp3 BMP/retinoic acid inducible neural specific 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:711,356...1,067,856
Ensembl chrNW_004936481:713,539...1,068,237
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chrNW_004936478:3,721,662...3,724,471
Ensembl chrNW_004936478:3,721,662...3,724,433
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17670789)
(PMID:15148302)
Ensembl
MGI
PMID:15148302 PMID:17670789 GO_REF:0000107 NCBI chrNW_004936481:19,863,487...19,984,299
Ensembl chrNW_004936481:19,863,487...19,983,926
JBrowse link
G LOC101960999 voltage-dependent P/Q-type calcium channel subunit alpha-1A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chrNW_004936659:2,201,606...2,269,625
Ensembl chrNW_004936659:2,192,610...2,392,638
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chrNW_004936589:2,280,803...2,390,179
Ensembl chrNW_004936589:2,280,799...2,390,179
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Nkx6-1 NK6 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19592574) Ensembl
MGI
PMID:19592574 GO_REF:0000107 NCBI chrNW_004936738:318,020...322,869
Ensembl chrNW_004936738:317,907...324,235
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11113533) Ensembl
TreeGrafter
MGI
PMID:11113533 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8955272)
(PMID:8876243)
Ensembl
MGI
PMID:8876243 PMID:8955272 GO_REF:0000107 NCBI chrNW_004936511:2,857,017...2,859,705
Ensembl chrNW_004936511:2,857,331...2,859,277
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571630) Ensembl
MGI
PMID:16571630 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chrNW_004936548:3,213,305...3,599,876
Ensembl chrNW_004936548:3,213,466...3,599,425
JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chrNW_004936597:4,000,433...4,493,920
Ensembl chrNW_004936597:4,000,400...4,156,221
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065
JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19286674) Ensembl
MGI
PMID:19286674 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chrNW_004936580:4,165,255...4,179,285
Ensembl chrNW_004936580:4,166,619...4,186,443
JBrowse link
G Dclk1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chrNW_004936472:29,958,716...30,287,798
Ensembl chrNW_004936472:29,964,218...30,287,841
JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508
JBrowse link
G Ephb1 EPH receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chrNW_004936529:8,006,780...8,261,923
Ensembl chrNW_004936529:7,839,768...8,261,942
JBrowse link
G Ephb2 EPH receptor B2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106
JBrowse link
G Ephb3 EPH receptor B3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chrNW_004936578:5,286,580...5,297,369
Ensembl chrNW_004936578:5,287,340...5,298,142
JBrowse link
G Kifbp kinesin family binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:9,395,490...9,421,093
Ensembl chrNW_004936521:9,395,465...9,421,629
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18031680) Ensembl
MGI
PMID:18031680 GO_REF:0000107 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10585298) Ensembl
MGI
PMID:10585298 GO_REF:0000107 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486
JBrowse link
G Prdm8 PR/SET domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22284184) Ensembl
MGI
PMID:22284184 GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17197442) Ensembl
TreeGrafter
MGI
PMID:17197442 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936661:2,831,132...2,903,619
Ensembl chrNW_004936661:2,827,572...2,903,655
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191
JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chrNW_004936479:13,252,678...13,255,570
Ensembl chrNW_004936479:13,252,678...13,255,570
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:4,870,126...4,873,158
Ensembl chrNW_004936581:4,869,686...4,873,217
JBrowse link
G Dixdc1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chrNW_004936612:2,440,357...2,518,596
Ensembl chrNW_004936612:2,443,525...2,517,114
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20798045) Ensembl
MGI
PMID:20798045 GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004936559:6,612,318...6,680,690
Ensembl chrNW_004936559:6,619,531...6,670,727
Ensembl chrNW_004936559:6,619,531...6,670,727
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chrNW_004936654:740,270...1,119,065
Ensembl chrNW_004936654:740,194...1,119,067
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,801,636...14,803,437
Ensembl chrNW_004936490:14,802,275...14,803,423
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,506,845...19,584,411
Ensembl chrNW_004936478:19,506,154...19,583,364
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10407039) Ensembl
MGI
PMID:10407039 GO_REF:0000107 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28556830) Ensembl
MGI
PMID:28556830 GO_REF:0000107 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747
JBrowse link
G Gli1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779
JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
JBrowse link
G LOC101972766 tubulin alpha-1A chain involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chrNW_004936512:6,959,656...6,964,299
Ensembl chrNW_004936512:6,958,985...6,964,299
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004936778:149,844...248,905
Ensembl chrNW_004936778:149,177...247,357
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chrNW_004936502:7,649,808...7,732,731
Ensembl chrNW_004936502:7,649,842...7,735,382
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:7,544,047...7,575,922
Ensembl chrNW_004936512:7,544,003...7,576,315
JBrowse link
G Mdk midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,687,825...2,690,292
Ensembl chrNW_004936562:2,687,825...2,689,484
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004936471:6,003,294...6,108,677
Ensembl chrNW_004936471:6,009,091...6,154,529
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) Ensembl
TreeGrafter
MGI
PMID:20153830 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936888:554,859...557,759
Ensembl chrNW_004936888:554,822...557,713
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17409116) Ensembl
MGI
PMID:17409116 GO_REF:0000107 NCBI chrNW_004936569:5,642,328...5,668,278
Ensembl chrNW_004936569:5,642,264...5,668,323
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004936602:2,744,757...3,011,051
Ensembl chrNW_004936602:2,744,759...3,007,940
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:2,493,280...2,496,738
Ensembl chrNW_004936475:2,494,156...2,496,743
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:20,126...1,421,075
Ensembl chrNW_004936687:549,947...1,421,133
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17984326) Ensembl
MGI
PMID:17984326 GO_REF:0000107 NCBI chrNW_004936486:19,287,468...19,341,127
Ensembl chrNW_004936486:19,287,462...19,341,145
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004936592:644,618...679,615
Ensembl chrNW_004936592:644,430...679,800
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:23042739)
MGI PMID:21800304 PMID:23042739 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Ophn1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408
JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9405095) Ensembl
MGI
PMID:9405095 GO_REF:0000107 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Atf5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,713,527...3,717,824
Ensembl chrNW_004936664:3,713,527...3,717,824
JBrowse link
G Egf epidermal growth factor acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Gbx2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16651541) Ensembl
MGI
PMID:16651541 GO_REF:0000107 NCBI chrNW_004936525:1,870,211...1,873,536
Ensembl chrNW_004936525:1,870,195...1,873,539
JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351
JBrowse link
G Psmg1 proteasome assembly chaperone 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20498273) Ensembl
MGI
PMID:20498273 GO_REF:0000107 NCBI chrNW_004936500:3,997,415...4,006,394
Ensembl chrNW_004936500:3,997,379...4,006,418
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24466353) Ensembl
MGI
PMID:24466353 GO_REF:0000107 NCBI chrNW_004936623:2,678,627...2,942,387
Ensembl chrNW_004936623:2,678,638...2,942,216
JBrowse link
G Rora RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,402,056...21,567,908
Ensembl chrNW_004936471:21,400,589...22,069,643
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10027293) Ensembl
MGI
PMID:10027293 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Znf423 zinc finger protein 423 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27727273) Ensembl
MGI
PMID:27727273 GO_REF:0000107 NCBI chrNW_004936475:2,699,722...2,956,734
Ensembl chrNW_004936475:2,699,702...3,010,912
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18327254) Ensembl
MGI
PMID:18327254 GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004936471:6,003,294...6,108,677
Ensembl chrNW_004936471:6,009,091...6,154,529
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101960999 voltage-dependent P/Q-type calcium channel subunit alpha-1A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chrNW_004936659:2,201,606...2,269,625
Ensembl chrNW_004936659:2,192,610...2,392,638
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:833,665...853,547
Ensembl chrNW_004936614:835,866...853,547
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19074029) Ensembl
MGI
PMID:19074029 GO_REF:0000107 NCBI chrNW_004936538:7,581,453...7,609,543
Ensembl chrNW_004936538:7,581,498...7,609,544