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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development



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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194
JBrowse link
G ADGRA2 adhesion G protein-coupled receptor A2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr15:48,572,953...48,611,034
Ensembl chr15:48,573,197...48,610,668
JBrowse link
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:28,566,279...28,760,471
Ensembl chr 1:28,566,266...28,760,468
JBrowse link
G ALDH3A2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:59,936,838...59,953,677
Ensembl chr12:59,936,848...59,954,358
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,098
JBrowse link
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:22,745,635...22,771,728
Ensembl chr14:22,745,641...22,771,727
JBrowse link
G APLP1 amyloid beta precursor like protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:45,285,698...45,295,355
Ensembl chr 6:45,285,718...45,295,350
JBrowse link
G APLP2 amyloid beta precursor like protein 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:56,798,781...56,871,849
Ensembl chr 9:56,798,810...56,872,642
JBrowse link
G APP amyloid beta precursor protein involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056
JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:49,259,118...49,450,471
Ensembl chr 7:49,259,651...49,450,461
JBrowse link
G B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:121,205,070...121,222,997
Ensembl chr13:121,206,550...121,223,922
JBrowse link
G BCAN brevican involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:93,432,331...93,450,895
Ensembl chr 4:93,432,330...93,450,831
JBrowse link
G CAPG capping actin protein, gelsolin like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:59,335,483...59,366,855
Ensembl chr 3:59,339,966...59,366,846
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:72,572,455...72,754,443
Ensembl chr 4:72,573,453...72,694,146
JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11823447) Ensembl
MGI
PMID:11823447 GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279
JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718
JBrowse link
G COX7B cytochrome c oxidase subunit 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,962,383...61,969,011
Ensembl chr  X:61,962,412...61,970,152
JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chr14:104,561,394...104,567,099
Ensembl chr14:104,563,195...104,567,095
JBrowse link
G CYP26C1 cytochrome P450 family 26 subfamily C member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17067568) Ensembl
MGI
PMID:17067568 GO_REF:0000107 NCBI chr14:104,550,901...104,558,977
Ensembl chr14:104,551,134...104,559,978
JBrowse link
G DAZAP1 DAZ associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:77,048,890...77,070,565
Ensembl chr 2:77,048,896...77,070,453
JBrowse link
G DHX30 DExH-box helicase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:30,602,008...30,632,506
Ensembl chr13:30,617,376...30,632,497
JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,967,890...164,978,541
Ensembl chr 6:164,970,176...164,991,968
JBrowse link
G DNER delta/notch like EGF repeat containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:130,414,159...130,754,043
Ensembl chr15:130,415,061...130,754,048
JBrowse link
G DSCAM DS cell adhesion molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:203,566,765...204,292,079
Ensembl chr13:203,567,129...204,313,820
JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:44,785,142...45,153,256
Ensembl chr 9:44,785,701...45,147,140
JBrowse link
G ECRG4 ECRG4 augurin precursor involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:48,960,413...48,971,878
Ensembl chr 3:48,960,429...48,971,511
JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:98,203,820...98,246,199
Ensembl chr 7:98,203,815...98,224,462
JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,832,947...11,940,080
Ensembl chr14:11,832,962...11,940,070
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:69,842,061...69,863,940
Ensembl chr 3:69,839,890...69,859,731
JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr14:127,649,675...127,656,972
Ensembl chr14:127,650,688...127,655,706
JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20675713) Ensembl
MGI
PMID:20675713 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253
JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,367...120,399,831
JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within ISO (PMID:17005728) MGI PMID:17005728 NCBI chr 8:36,875,649...36,943,016
Ensembl chr 8:36,874,331...36,942,773
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18346921) Ensembl
MGI
PMID:18346921 GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745
JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:236,456,238...236,467,887
Ensembl chr 1:236,455,240...236,468,210
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628)
(PMID:12435629)
Ensembl
MGI
PMID:12435628 PMID:12435629 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11787818) Ensembl
MGI
PMID:11787818 GO_REF:0000107 NCBI chr 6:82,014,022...82,050,240
Ensembl chr 6:82,013,969...82,050,236
JBrowse link
G GSN gelsolin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,307,008...261,372,848
JBrowse link
G GSX1 GS homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:5,194,872...5,197,275
Ensembl chr11:5,194,603...5,197,041
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11731457), (PMID:12724834) Ensembl
MGI
PMID:11731457 PMID:12724834 GO_REF:0000107 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,552...40,883,995
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:30,351,433...30,360,245
Ensembl chr17:30,351,497...30,359,845
JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:91,857,495...91,935,485
Ensembl chr 2:91,857,582...91,907,351
JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:93,462,306...93,468,394
Ensembl chr 4:93,462,308...93,467,802
JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:54,519,790...54,537,429
Ensembl chr 7:54,519,800...54,537,434
JBrowse link
G HELT helt bHLH transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16968817) Ensembl
MGI
PMID:16968817 GO_REF:0000107 NCBI chr15:46,087,988...46,089,986
Ensembl chr15:46,087,696...46,090,084
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,546...81,424,075
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10911993)
(PMID:9875844)
(PMID:9889105)
Ensembl
MGI
PMID:9875844 PMID:9889105 PMID:10911993 GO_REF:0000107 NCBI chr11:75,537,027...75,547,711
Ensembl chr11:75,537,036...75,547,716
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302) Ensembl
MGI
PMID:15148302 GO_REF:0000107 NCBI chr 4:85,403,287...85,570,738
Ensembl chr 4:85,406,223...85,571,443
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:79,789,796...79,795,895
Ensembl chr 1:79,789,815...79,795,760
JBrowse link
G MARCKSL1 MARCKS like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:88,785,412...88,787,772
Ensembl chr 6:88,786,175...88,787,766
JBrowse link
G MIR124A-1 microRNA mir-124a-1 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr 4:69,968,854...69,968,958
Ensembl chr 4:69,968,854...69,968,958
JBrowse link
G MIR124A-2 microRNA mir-124a-2 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr14:13,201,425...13,201,509
Ensembl chr14:13,201,425...13,201,509
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:1,724,930...1,730,724
Ensembl chr18:1,725,244...1,730,878
JBrowse link
G MSI1 musashi RNA binding protein 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr14:40,331,371...40,356,793
Ensembl chr14:40,331,377...40,356,788
JBrowse link
G MSI2 musashi RNA binding protein 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:33,537,163...33,974,845
Ensembl chr12:33,537,196...33,975,548
JBrowse link
G MTF1 metal regulatory transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:93,837,195...93,884,427
Ensembl chr 6:93,839,205...93,884,409
JBrowse link
G NCAN neurocan involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:58,638,808...58,669,757
Ensembl chr 2:58,638,808...58,674,130
JBrowse link
G NDN necdin, MAGE family member acts_upstream_of_or_within ISO (PMID:15649943) MGI PMID:15649943 NCBI chr 1:142,412,688...142,413,665
Ensembl chr 1:142,412,565...142,414,240
JBrowse link
G NGFR nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11978834) Ensembl
MGI
PMID:11978834 GO_REF:0000107 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,356
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10688202) Ensembl
MGI
PMID:10688202 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,928,866...108,248,018
Ensembl chr 9:107,928,866...108,247,593
JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11731459)
(PMID:12652306)
MGI PMID:11731459 PMID:12652306 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,579...186,038,229
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969
JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861161|PMID:10854042) Ensembl
UniProt
PMID:10854042 GO_REF:0000107 MGI:1861161 NCBI chr 2:74,702,915...74,729,792
Ensembl chr 2:74,702,945...74,729,775
JBrowse link
G PTEN phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:12091320) MGI PMID:12091320 NCBI chr14:99,929,590...100,021,619 JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:11900467) InterPro
MGI
GO_Central
Ensembl
PMID:11900467 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:103,460,855...103,963,728
Ensembl chr 9:103,460,863...103,963,883
JBrowse link
G RELN reelin involved_in IEA InterPro GO_REF:0000002
G RUNX1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO (PMID:16174759) MGI PMID:16174759 NCBI chr13:198,371,835...198,635,648
Ensembl chr13:198,371,837...198,638,189
JBrowse link
G SCIN scinderin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:82,103,271...82,185,254
Ensembl chr 9:82,103,087...82,185,283
JBrowse link
G SEMA6B semaphorin 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,262,303...74,296,386
Ensembl chr 2:74,258,439...74,296,385
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
MGI
UniProt
PMID:12435628 GO_REF:0000107 GO_REF:0000117 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484
JBrowse link
G SLC2A1 solute carrier family 2 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10227690), (PMID:1714544) Ensembl
ARUK-UCL
PMID:1714544 PMID:10227690 GO_REF:0000107 NCBI chr 6:168,535,398...168,561,170
Ensembl chr 6:168,535,440...168,560,867
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:12435628) Ensembl
MGI
GO_Central
PMID:12435628 GO_REF:0000033 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898
JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G SPINK5 serine peptidase inhibitor Kazal type 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:149,309,482...149,382,286
Ensembl chr 2:149,309,540...149,382,282
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:86,585,225...86,784,316
Ensembl chr 3:86,585,054...86,784,149
JBrowse link
G STK3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chr 4:38,011,802...38,306,777
Ensembl chr 4:38,011,814...38,306,773
JBrowse link
G STK4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chr17:47,387,594...47,475,705
Ensembl chr17:47,387,600...47,475,718
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19624305) Ensembl
MGI
PMID:19624305 GO_REF:0000107 NCBI chr 6:167,811,589...167,861,321
Ensembl chr 6:167,811,598...167,861,583
JBrowse link
G THOC6 THO complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,161,442...39,164,631
Ensembl chr 3:39,161,434...39,164,707
JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chr14:112,206,964...112,213,957
Ensembl chr14:112,207,360...112,213,955
JBrowse link
G TLX3 T cell leukemia homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12023301) Ensembl
MGI
PMID:12023301 GO_REF:0000107 NCBI chr16:52,823,839...52,826,717
Ensembl chr16:52,823,657...52,826,804
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16199867) Ensembl
MGI
PMID:16199867 GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818
JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chr10:19,823,932...19,889,883
Ensembl chr10:19,823,936...19,889,869
JBrowse link
G TPP1 tripeptidyl peptidase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:3,135,580...3,143,408
Ensembl chr 9:3,135,642...3,143,404
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:10601036)
(PMID:10601035)
Ensembl
MGI
GO_Central
PMID:10601035 PMID:10601036 GO_REF:0000033 GO_REF:0000107 NCBI chr14:127,269,723...127,277,007
Ensembl chr14:127,271,566...127,275,744
JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:71,593,807...71,622,487
Ensembl chr 3:71,593,812...71,622,444
JBrowse link
G VCAN versican involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:91,682,177...91,811,674
Ensembl chr 2:91,384,391...91,811,208
JBrowse link
G VCAN versican involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:9875844) GO_Central
MGI
PMID:9875844 GO_REF:0000033 NCBI chr 2:91,358,348...91,643,697
Ensembl chr 2:91,384,391...91,811,208
JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,085,929...37,821,159
Ensembl chr 4:37,090,936...37,820,419
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28675177) Ensembl
MGI
PMID:28675177 GO_REF:0000107 NCBI chr 1:158,233,039...158,273,533
Ensembl chr 1:158,233,070...158,270,679
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742
JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16598713) Ensembl
MGI
PMID:16598713 GO_REF:0000107 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
JBrowse link
G ZIC1 Zic family member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:9412507)
(PMID:11756505)
GO_Central
MGI
PMID:9412507 PMID:11756505 GO_REF:0000033 NCBI chr13:87,740,769...87,750,258
Ensembl chr13:87,745,552...87,750,192
JBrowse link
G ZIC2 Zic family member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:11756505) GO_Central
MGI
PMID:11756505 GO_REF:0000033 NCBI chr11:68,840,802...68,845,441
Ensembl chr11:68,840,631...68,845,378
JBrowse link
G ZIC3 Zic family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814
JBrowse link
G ZIC5 Zic family member 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:68,821,733...68,830,472
Ensembl chr11:68,821,735...68,830,540
JBrowse link
G ZNF76 zinc finger protein 76 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:31,161,130...31,192,321
Ensembl chr 7:31,161,320...31,192,575
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,985,126...81,081,014
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9140068) Ensembl
MGI
PMID:9140068 GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
G GHRH growth hormone releasing hormone involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15985453) Ensembl
MGI
PMID:15985453 GO_REF:0000107 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
G GHRHR growth hormone releasing hormone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1270792), (PMID:1329576), (PMID:1504465) Ensembl
MGI
PMID:1270792 PMID:1329576 PMID:1504465 GO_REF:0000107 NCBI chr18:42,030,505...42,046,178
Ensembl chr18:42,030,510...42,046,184
JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within ISO (PMID:8631293) MGI PMID:8631293 NCBI chr11:5,194,872...5,197,275
Ensembl chr11:5,194,603...5,197,041
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18996108) Ensembl
MGI
PMID:18996108 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237
JBrowse link
G POU1F1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chr13:168,510,671...168,530,394
Ensembl chr13:168,510,774...168,529,345
JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chr 2:79,627,466...79,631,270
Ensembl chr 2:79,627,603...79,631,270
JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9247269) Ensembl
MGI
PMID:9247269 GO_REF:0000107 NCBI chr16:79,186,114...79,220,302
Ensembl chr16:79,186,108...79,220,297
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr13:119,668,476...119,669,435
Ensembl chr13:119,668,476...119,669,435
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUOX2 dual oxidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17440044) Ensembl
MGI
PMID:17440044 GO_REF:0000107 NCBI chr 1:126,620,468...126,641,406
Ensembl chr 1:126,620,510...126,641,406
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:158,905,464...158,984,743
Ensembl chr 6:158,905,410...158,983,382
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2664023|PMID:12805306) ARUK-UCL
Ensembl
PMID:12805306 GO_REF:0000107 MGI:2664023 NCBI chr 4:90,341,316...90,371,040
Ensembl chr 4:90,341,322...90,370,996
JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,829,560...193,906,565
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12527005) Ensembl
MGI
PMID:12527005 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr 9:11,830,095...11,973,074
Ensembl chr 9:11,830,095...12,020,415
JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24441682) Ensembl
MGI
PMID:24441682 GO_REF:0000107 NCBI chr15:68,208,884...68,222,993
Ensembl chr15:68,213,562...68,222,990
JBrowse link
G UBA6 ubiquitin like modifier activating enzyme 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23499007) Ensembl
MGI
PMID:23499007 GO_REF:0000107 NCBI chr 8:65,381,058...65,470,829
Ensembl chr 8:65,381,061...65,488,925
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 4:69,801,619...69,803,375
Ensembl chr 4:69,802,200...69,803,309
JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,786,806...71,814,946
Ensembl chr 6:71,786,800...71,814,679
JBrowse link
G FBXO45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19398581) Ensembl
MGI
PMID:19398581 GO_REF:0000107 NCBI chr13:133,544,915...133,560,687
Ensembl chr13:133,545,417...133,560,499
JBrowse link
G NFIB nuclear factor I B involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11997145) Ensembl
MGI
PMID:11997145 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G PLXNA4 plexin A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15814794) Ensembl
MGI
PMID:15814794 GO_REF:0000107 NCBI chr18:16,475,250...16,977,821
Ensembl chr18:16,427,673...16,973,768
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21055390) Ensembl
MGI
PMID:21055390 GO_REF:0000107 NCBI chr 9:10,927,224...10,940,851
Ensembl chr 9:10,927,342...10,942,668
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr 4:111,006,338...111,076,924
Ensembl chr 4:111,006,968...111,076,918
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chr14:49,467,186...49,485,845
Ensembl chr14:49,468,877...49,485,850
JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,218,116...24,221,162
Ensembl chr 7:24,218,120...24,221,162
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056
JBrowse link
G BACE2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr13:204,600,740...204,720,215
Ensembl chr13:204,600,735...204,694,836
JBrowse link
G C1QA complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:80,586,259...80,589,213
Ensembl chr 6:80,586,280...80,589,204
JBrowse link
G C5AR1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,097,162...53,111,563
Ensembl chr 6:53,097,142...53,111,565
JBrowse link
G CNTF ciliary neurotrophic factor involved_in ISO
IEA
IBA
spinal cord astrocytes RGD
TreeGrafter
GO_Central
PMID:11771938 GO_REF:0000033 GO_REF:0000118 RGD:1626172 NCBI chr 2:12,492,777...12,495,401
Ensembl chr 2:12,493,169...12,496,159
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589
JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670
JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chr 1:27,037,151...27,061,095
Ensembl chr 1:27,037,165...27,061,093
JBrowse link
G LOC110258578 interleukin-1 beta-like acts_upstream_of_or_within ISO (PMID:28377412) MGI PMID:28377412
G MT-2B metallothionein-2A ISO RGD PMID:19837066 RGD:6483825 NCBI chr 6:18,645,125...18,646,034
Ensembl chr 6:18,645,153...18,646,033
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23680462) Ensembl
MGI
PMID:23680462 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6095556|PMID:29073081) ARUK-UCL PMID:29073081 MGI:6095556 NCBI chr 7:36,465,921...36,471,509
Ensembl chr 7:36,465,324...36,471,516
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
JBrowse link
G ZFP91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:12,495,548...12,532,281
Ensembl chr 2:12,495,558...12,531,633
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056
JBrowse link
G GRN granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chr 5:22,435,636...22,519,276 JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chr 7:24,218,116...24,221,162
Ensembl chr 7:24,218,120...24,221,162
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346
JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,189,602...49,191,976
JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:122,060,408...122,070,327
Ensembl chr13:122,060,473...122,070,304
JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11487638) Ensembl
MGI
PMID:11487638 GO_REF:0000107 NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,466,592
JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19907020) Ensembl
MGI
PMID:19907020 GO_REF:0000107 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,286...31,750,833
JBrowse link
G LAMC3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19907020) Ensembl
MGI
PMID:19907020 GO_REF:0000107 NCBI chr 1:271,004,423...271,071,223
Ensembl chr 1:271,004,433...271,071,223
JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chr  X:84,676,627...84,683,517
Ensembl chr  X:84,666,733...84,685,058
JBrowse link
G ROR1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 6:148,314,575...148,834,659
Ensembl chr 6:148,315,286...148,761,524
JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296
JBrowse link
G S100A8 S100 calcium binding protein A8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chr 4:96,209,670...96,210,603
Ensembl chr 4:96,209,659...96,210,602
JBrowse link
G S100A9 S100 calcium binding protein A9 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr 4:96,236,114...96,238,989 JBrowse link
G TLR4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970
JBrowse link
G TSPAN2 tetraspanin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chr 4:105,503,099...105,542,121
Ensembl chr 4:105,503,119...105,542,126
JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11487638) Ensembl
MGI
PMID:11487638 GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 ISO RGD PMID:17141959 RGD:2303044 NCBI chr 3:28,360,868...28,472,940
Ensembl chr 3:28,360,873...28,473,456
JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr15:20,104,808...20,171,721
Ensembl chr15:20,104,812...20,167,421
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:15882580) Ensembl
MGI
PMID:15882580 GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195
JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:98,668,945...98,730,582
Ensembl chr  X:98,668,953...98,730,565
JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chr 6:154,156,595...155,374,403
Ensembl chr 6:154,936,460...155,374,399
JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:122,060,408...122,070,327
Ensembl chr13:122,060,473...122,070,304
JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr13:14,209,590...14,216,184
Ensembl chr13:14,209,736...14,215,797
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964
JBrowse link
G GAP43 growth associated protein 43 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15234344) Ensembl
MGI
PMID:15234344 GO_REF:0000107 NCBI chr13:144,364,314...144,458,136
Ensembl chr13:144,364,317...144,629,174
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881
JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr 9:46,300,039...46,308,681
Ensembl chr 9:46,300,050...46,308,868
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,763...127,503,257
JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,757...15,282,839
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chr14:47,221,540...47,239,513
Ensembl chr14:47,221,560...47,238,749
JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chr 8:96,925,063...96,972,390
Ensembl chr 8:96,925,081...96,972,383
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr 3:121,543,201...121,549,678
Ensembl chr 3:121,543,109...121,549,046
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of ISO (PMID:10442636), (PMID:9878702)
(PMID:11297510)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969
JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:29106906)
(PMID:21800304)
MGI PMID:21800304 PMID:29106906 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567
JBrowse link
G NKX2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19258013) Ensembl
MGI
PMID:19258013 GO_REF:0000107 NCBI chr17:29,275,656...29,279,572
Ensembl chr17:29,275,698...29,278,606
JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:14702088) Ensembl
MGI
PMID:14702088 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:144,822,937...144,956,451
Ensembl chr 2:144,822,939...144,956,451
JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19258013) RGD
MGI
Ensembl
PMID:19258013 PMID:22944581 GO_REF:0000107 RGD:8552357 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200
JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10357934) Ensembl
MGI
PMID:10357934 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484
JBrowse link
G SOX6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,992
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15590934) Ensembl
MGI
PMID:15590934 GO_REF:0000107 NCBI chr14:127,269,723...127,277,007
Ensembl chr14:127,271,566...127,275,744
JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,856,093...77,978,194
Ensembl chr 3:77,856,138...77,975,429
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCM1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14573516) Ensembl
MGI
PMID:14573516 GO_REF:0000107 NCBI chr 7:46,767,498...46,798,317
Ensembl chr 7:46,767,498...46,791,037
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,825,157...40,830,736
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chr 6:164,282,242...164,297,636
Ensembl chr 6:164,283,366...164,295,290
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20980600) Ensembl
MGI
PMID:20980600 GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 9:120,888,891...120,984,724
Ensembl chr 9:120,892,952...120,984,695
JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10816608) Ensembl
MGI
PMID:10816608 GO_REF:0000107 NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,466,592
JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:24062445) Ensembl
MGI
PMID:24062445 GO_REF:0000107 NCBI chr10:24,306,731...24,315,093
Ensembl chr10:24,307,058...24,315,103
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr 1:164,381,892...164,469,313
Ensembl chr 1:164,381,845...164,471,226
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr14:50,083,079...50,165,528
Ensembl chr14:50,082,896...50,165,513
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr 3:18,291,444...18,299,410
Ensembl chr 3:18,291,445...18,299,567
JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21319224) Ensembl
MGI
PMID:21319224 GO_REF:0000107 NCBI chr 6:155,800,838...155,894,919
Ensembl chr 6:155,800,678...155,894,912
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10375501) Ensembl
MGI
PMID:10375501 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484
JBrowse link
G TTC21B tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chr15:72,430,250...72,512,503
Ensembl chr15:72,430,726...72,512,491
JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10816608) Ensembl
MGI
PMID:10816608 GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AATK apoptosis associated tyrosine kinase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:22573681) GO_Central
MGI
PMID:22573681 GO_REF:0000033 NCBI chr12:1,573,554...1,609,621
Ensembl chr12:1,593,020...1,607,685
JBrowse link
G ABCB6 ATP binding cassette subfamily B member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:121,246,180...121,254,350
Ensembl chr15:121,246,187...121,254,331
JBrowse link
G ABR ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chr12:46,709,840...46,895,819
Ensembl chr12:46,709,880...46,895,808
JBrowse link
G ACHE acetylcholinesterase ISO RGD PMID:20147288 RGD:405855864 NCBI chr 3:8,732,451...8,738,274
Ensembl chr 3:8,732,441...8,738,605
JBrowse link
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:19,523,618...19,570,891
Ensembl chr 6:19,527,648...19,570,893
JBrowse link
G AFG2A AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:100,918,331...101,241,099
Ensembl chr 8:100,917,319...101,241,099
JBrowse link
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chr 7:117,609,791...117,667,247
Ensembl chr 7:117,609,840...117,667,455
JBrowse link
G ALK ALK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:17487225) MGI PMID:17487225 NCBI chr 3:109,411,146...110,105,755 JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:77,642,144...77,645,748
Ensembl chr 5:77,642,195...77,645,753
JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:31,744,729...31,789,750
Ensembl chr14:31,763,243...31,789,750
JBrowse link
G APAF1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9753321) Ensembl
MGI
PMID:9753321 GO_REF:0000107 NCBI chr 5:85,166,616...85,258,751
Ensembl chr 5:85,166,628...85,258,364
JBrowse link
G APOD apolipoprotein D involved_in ISS
IEA
UniProt
InterPro
GO_REF:0000002 GO_REF:0000024 NCBI chr13:132,514,546...132,562,594
Ensembl chr13:132,514,949...132,562,599
JBrowse link
G ARL6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chr13:162,509,451...162,556,675
Ensembl chr13:162,504,109...162,556,280
JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:49,259,118...49,450,471
Ensembl chr 7:49,259,651...49,450,461
JBrowse link
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) MGI PMID:20823249 NCBI chr10:19,971,516...20,039,680
Ensembl chr10:19,975,192...20,039,623
JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,552
JBrowse link
G ATOH1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chr 8:125,768,232...125,770,619
Ensembl chr 8:125,768,286...125,770,545
JBrowse link
G ATXN1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 7:12,299,938...12,730,850
Ensembl chr 7:12,301,013...12,457,450
JBrowse link
G ATXN1L ataxin 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,836,732...14,848,474
Ensembl chr 6:14,836,752...14,848,422
JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chr11:7,792,160...7,907,052
Ensembl chr11:7,792,368...7,907,049
JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chr 6:167,305,903...167,316,009
Ensembl chr 6:167,305,908...167,315,871
JBrowse link
G BAG6 BAG cochaperone 6 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,899...23,775,892
JBrowse link
G BBS7 Bardet-Biedl syndrome 7 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:102,213,455...102,259,204 JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11684658) Ensembl
MGI
PMID:11684658 GO_REF:0000107 NCBI chr14:49,208,662...49,322,109
Ensembl chr14:49,208,762...49,322,103
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:93,807,703...93,808,806
Ensembl chr 4:93,807,706...93,808,968
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7926765) Ensembl
MGI
PMID:7926765 GO_REF:0000107 NCBI chr10:52,586,089...52,596,154
Ensembl chr10:52,586,509...52,596,564
JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,112,943...14,254,810
Ensembl chr12:14,112,718...14,254,790
JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17476307) Ensembl
MGI
PMID:17476307 GO_REF:0000107 NCBI chr11:8,805,950...8,858,128
Ensembl chr11:8,805,953...8,858,418
JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:259,350,359...259,544,604
Ensembl chr 1:259,350,367...259,544,576
JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19004860) Ensembl
MGI
PMID:19004860 GO_REF:0000107 NCBI chr 9:8,393,610...8,512,843
Ensembl chr 9:8,393,612...8,512,848
JBrowse link
G CCDC141 coiled-coil domain containing 141 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:84,534,725...84,745,296
Ensembl chr15:84,535,922...84,734,182
JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29317443) Ensembl
MGI
PMID:29317443 GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:42,456,063...42,494,494
Ensembl chr12:42,493,392...42,494,413
JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr15:120,985,069...120,990,864
Ensembl chr15:120,985,257...120,986,354
JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:260,465,809...260,648,070
Ensembl chr 1:260,466,942...260,648,161
JBrowse link
G CFAP43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31004071) Ensembl
MGI
PMID:31004071 GO_REF:0000107 NCBI chr14:115,073,529...115,201,965
Ensembl chr14:115,073,366...115,174,043
JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27602517) Ensembl
MGI
PMID:27602517 GO_REF:0000107 NCBI chr 7:77,719,476...77,780,148
Ensembl chr 7:77,719,582...77,780,146
JBrowse link
G CIC capicua transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,638,986...49,664,146
Ensembl chr 6:49,638,990...49,662,947
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:58,179,084...58,184,778
Ensembl chr  X:58,179,087...58,184,499
JBrowse link
G CLN5 CLN5 intracellular trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,105,822...49,128,425
Ensembl chr11:49,105,878...49,129,886
JBrowse link
G CNTN1 contactin 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 5:72,168,496...72,495,454
Ensembl chr 5:72,168,511...72,495,633
JBrowse link
G CNTN2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:65,737,488...65,776,412
Ensembl chr 9:65,736,740...65,776,396
JBrowse link
G CNTN4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr13:58,642,653...59,642,134
Ensembl chr13:58,974,198...59,642,130
JBrowse link
G CNTN5 contactin 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:30,259,603...31,469,860
Ensembl chr 9:30,572,372...31,469,858
JBrowse link
G CNTN6 contactin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:57,754,233...58,014,830
Ensembl chr13:57,719,846...58,014,970
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,858,332...76,997,409
Ensembl chr11:76,858,356...76,997,322
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,730,741...49,754,362
Ensembl chr12:49,730,955...49,753,043
JBrowse link
G CWH43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chr 8:38,869,156...38,944,845
Ensembl chr 8:38,869,138...38,943,669
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,944,386...23,957,567
Ensembl chr13:23,944,369...23,957,486
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chr14:91,516,383...91,543,857
Ensembl chr14:91,516,431...91,552,752
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:12183377) GO_Central
TreeGrafter
MGI
PMID:12183377 GO_REF:0000033 GO_REF:0000118 NCBI chr15:15,663,652...15,666,706
Ensembl chr15:15,663,494...15,667,232
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr11:11,815,258...12,159,085
Ensembl chr11:11,815,357...12,158,826
JBrowse link
G DCX doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr  X:91,317,671...91,644,572
Ensembl chr  X:91,323,764...91,644,567
JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr14:75,117,708...75,119,907
Ensembl chr14:75,117,710...75,119,902
JBrowse link
G DHX37 DEAH-box helicase 37 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:28,206,152...28,242,436
Ensembl chr14:28,211,579...28,242,435
JBrowse link
G DIAPH1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chr 2:143,158,691...143,271,110
Ensembl chr 2:143,158,585...143,271,147
JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,967,890...164,978,541
Ensembl chr 6:164,970,176...164,991,968
JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr 1:120,138,249...120,298,603
Ensembl chr 1:120,138,336...120,298,586
JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,951,173...10,959,935
Ensembl chr 3:10,955,877...10,959,916
JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,785,142...45,153,256
Ensembl chr 9:44,785,701...45,147,140
JBrowse link
G EML1 EMAP like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:120,703,282...120,890,792
Ensembl chr 7:120,703,258...120,890,791
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:12091317)
(PMID:12561075)
Ensembl
MGI
GO_Central
PMID:12091317 PMID:12561075 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:69,842,061...69,863,940
Ensembl chr 3:69,839,890...69,859,731
JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:12196586), (PMID:12209834), (PMID:12561075)
(PMID:12091317)
Ensembl
MGI
GO_Central
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000033 GO_REF:0000107 NCBI chr14:127,649,675...127,656,972
Ensembl chr14:127,650,688...127,655,706
JBrowse link
G EOMES eomesodermin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:14,209,590...14,216,184
Ensembl chr13:14,209,736...14,215,797
JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:60,771,567...60,944,092
Ensembl chr 1:60,771,572...60,944,038
JBrowse link
G EPOR erythropoietin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11807041) Ensembl
MGI
PMID:11807041 GO_REF:0000107 NCBI chr 2:70,063,601...70,068,821
Ensembl chr 2:70,063,519...70,068,821
JBrowse link
G ESR2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,829,560...193,906,565
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:14605369) Ensembl
MGI
PMID:14605369 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12682014) Ensembl
MGI
PMID:12682014 GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724
JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834)
(PMID:20675713)
(PMID:23591631)
Ensembl
MGI
PMID:20675713 PMID:23591631 PMID:26306834 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253
JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr 1:246,852,387...246,916,650 JBrowse link
G FLVCR2 FLVCR heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chr 7:98,718,319...98,772,196
Ensembl chr 7:98,718,097...98,823,839
JBrowse link
G FNTA farnesyltransferase, CAAX box, subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,928,327...11,953,139
Ensembl chr17:11,928,358...11,951,684
JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9635428)
(PMID:4784576), (PMID:5500588)
Ensembl
MGI
PMID:4784576 PMID:5500588 PMID:9635428 GO_REF:0000107 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805
JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,374...5,312,106
JBrowse link
G FOXR1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chr 9:46,208,750...46,220,076
Ensembl chr 9:46,208,808...46,220,078
JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chr 1:140,566,443...140,906,516
Ensembl chr 1:140,566,540...140,905,623
JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr 6:86,817...105,987
Ensembl chr 6:64,714...105,993
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:45,768,172...45,783,652
Ensembl chr12:45,768,176...45,783,658
JBrowse link
G GIT2 GIT ArfGAP 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:40,995,986...41,051,896
Ensembl chr14:40,995,988...41,051,902
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435361), (PMID:17395647)
(PMID:8026071)
Ensembl
MGI
PMID:8026071 PMID:12435361 PMID:17395647 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900
JBrowse link
G GMPPB GDP-mannose pyrophosphorylase B involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:32,246,471...32,253,162
Ensembl chr13:32,248,268...32,253,155
Ensembl chr13:32,248,268...32,253,155
JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,862,312...50,202,748
Ensembl chr10:49,862,312...50,202,453
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:21377456) Ensembl
TreeGrafter
MGI
GO_Central
PMID:21377456 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12930780) Ensembl
MGI
PMID:12930780 GO_REF:0000107 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,552...40,883,995
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr 1:108,206,172...108,404,149
Ensembl chr 1:108,205,580...108,403,862
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881
JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11291863) Ensembl
MGI
PMID:11291863 GO_REF:0000107 NCBI chr13:39,046,961...39,088,926
Ensembl chr13:39,046,465...39,088,875
JBrowse link
G HMX2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chr14:132,691,108...132,699,477
Ensembl chr14:132,696,380...132,699,544
JBrowse link
G HMX3 H6 family homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chr14:132,684,994...132,687,485
Ensembl chr14:132,684,865...132,687,761
JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chr 4:87,720,747...87,743,037
Ensembl chr 4:87,720,118...87,742,992
JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr 6:79,849,691...79,958,283
Ensembl chr 6:79,849,698...79,958,334
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chr 6:13,895,276...14,307,790 JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,757...15,282,839
JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:96,740,718...96,763,875
Ensembl chr 1:96,740,584...96,763,838
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18930042) Ensembl
MGI
PMID:18930042 GO_REF:0000107 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983)
(PMID:22228099)
MGI PMID:19036983 PMID:22228099 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613
JBrowse link
G IGF1R insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr 1:137,383,623...137,691,038
Ensembl chr 1:137,387,825...137,691,058
JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21824519) Ensembl
MGI
PMID:21824519 GO_REF:0000107 NCBI chr18:34,006,841...34,930,252
Ensembl chr18:34,006,900...34,907,287
JBrowse link
G IRS2 insulin receptor substrate 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12904469) Ensembl
MGI
PMID:12904469 GO_REF:0000107 NCBI chr11:76,626,158...76,654,639
Ensembl chr11:76,626,179...76,653,881
JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:23906841) Ensembl
MGI
GO_Central
PMID:23906841 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:49,826,428...49,887,758
Ensembl chr 9:49,826,501...49,888,860
JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:65,556,837...65,565,880
Ensembl chr 5:65,561,962...65,565,116
JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chr17:62,459,277...62,506,403
Ensembl chr17:62,459,281...62,506,424
JBrowse link
G KDM4B lysine demethylase 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,746,379...73,889,881
Ensembl chr 2:73,747,669...73,889,866
JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr10:23,444,997...23,491,081
Ensembl chr10:23,445,000...23,491,181
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:26306834), (PMID:29360985)
(PMID:29360985)
MGI PMID:26306834 PMID:29360985
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14566948), (PMID:15295034) Ensembl
MGI
PMID:14566948 PMID:15295034 GO_REF:0000107 NCBI chr 1:264,900,931...264,920,888
Ensembl chr 1:264,900,591...264,920,890
JBrowse link
G LOC100519023 small vasohibin-binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr 4:107,654,578...107,655,087 JBrowse link
G LOC106504154 sex-determining region Y protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:40,553,946...40,555,093 JBrowse link
G MACO1 macoilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:82,934,083...82,995,688
Ensembl chr 6:82,933,826...82,997,142
JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,635,105...24,686,846
Ensembl chr17:22,635,284...24,683,549
JBrowse link
G MACROH2A2 macroH2A.2 histone involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,002,385...73,055,228
Ensembl chr14:73,003,117...73,055,229
JBrowse link
G MAP1S microtubule associated protein 1S involved_in ISO (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chr 2:60,003,116...60,043,133
Ensembl chr 2:59,999,168...60,029,865
JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,153,109...66,184,303
Ensembl chr 2:66,153,115...66,184,289
JBrowse link
G MATCAP1 microtubule associated tyrosine carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,818,257...27,826,896
Ensembl chr 6:27,818,262...27,824,777
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr 7:33,205,736...33,269,213
Ensembl chr 7:33,210,158...33,269,130
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18571096) Ensembl
MGI
PMID:18571096 GO_REF:0000107 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,738,659
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10882104) Ensembl
MGI
PMID:10882104 GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409
JBrowse link
G MEIS1 Meis homeobox 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:75,485,024...75,625,855
Ensembl chr 3:75,485,022...75,625,040
JBrowse link
G MEIS2 Meis homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:134,013,642...134,223,013
Ensembl chr 1:134,013,820...134,223,012
JBrowse link
G MEIS3 Meis homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:53,175,920...53,188,455
Ensembl chr 6:53,175,928...53,188,406
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chr18:29,426,044...29,541,526
Ensembl chr18:29,426,048...29,541,512
JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:6196220|PMID:30074985)
(PMID:26005865), (PMID:26005868)
Ensembl
ARUK-UCL
PMID:26005865 PMID:26005868 PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chr 6:95,738,961...95,753,245
Ensembl chr 6:95,738,969...95,753,245
JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chr12:52,016,297...52,066,687
Ensembl chr12:52,016,299...52,066,693
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chr12:53,647,579...53,781,552 JBrowse link
G NAPA NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11706940) Ensembl
MGI
PMID:11706940 GO_REF:0000107 NCBI chr 6:53,249,330...53,275,304
Ensembl chr 6:53,246,968...53,275,265
JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chr17:38,114,284...38,221,904
Ensembl chr17:38,114,291...38,221,901
JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28916769) Ensembl
MGI
PMID:28916769 GO_REF:0000107 NCBI chr16:32,874,418...32,985,638
Ensembl chr16:32,874,450...32,987,828
JBrowse link
G NEGR1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chr 6:140,780,397...141,652,414
Ensembl chr 6:140,780,723...141,647,820
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969
JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23863479) Ensembl
MGI
PMID:23863479 GO_REF:0000107 NCBI chr14:46,653,869...46,726,421
Ensembl chr14:46,653,900...46,731,999
JBrowse link
G NFASC neurofascin involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:65,502,565...65,715,612
Ensembl chr 9:65,502,259...65,713,518
JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,469...22,363,821
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8557195)
(PMID:12930780)
Ensembl
MGI
PMID:8557195 PMID:12930780 GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr 4:81,639,907...81,912,276
Ensembl chr 4:81,639,909...81,911,743
JBrowse link
G NNAT neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chr17:40,625,990...40,629,523 JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11311163) Ensembl
MGI
PMID:11311163 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12397106) Ensembl
MGI
PMID:12397106 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14994267) Ensembl
MGI
PMID:14994267 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681
JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chr 5:65,052,608...65,122,645
Ensembl chr 5:65,052,519...65,123,788
JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:70,088,119...70,097,027
Ensembl chr 2:70,087,887...70,096,924
JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(PMID:27486780) Ensembl
MGI
PMID:27486780 GO_REF:0000107 NCBI chr12:20,766,088...20,791,527
Ensembl chr12:20,766,884...20,791,476
JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10409504), (PMID:12196586) Ensembl
MGI
PMID:10409504 PMID:12196586 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200
JBrowse link
G PBX1 PBX homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:85,824,590...86,170,328
Ensembl chr 4:85,824,666...86,170,191
JBrowse link
G PBX2 PBX homeobox 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:24,221,565...24,226,940
Ensembl chr 7:24,221,565...24,226,940
JBrowse link
G PBX3 PBX homeobox 3 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:266,383,311...266,610,646
Ensembl chr 1:266,382,640...266,610,640
JBrowse link
G PBX4 PBX homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:58,303,066...58,363,919
Ensembl chr 2:58,304,081...58,363,915
JBrowse link
G PCDH18 protocadherin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,321,487...89,335,406
Ensembl chr 8:89,321,491...89,335,388
JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:390,347...416,805
Ensembl chr 5:403,765...416,798
JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834) Ensembl
MGI
PMID:26306834 GO_REF:0000107 NCBI chr 6:165,212,828...165,222,412
Ensembl chr 6:165,212,833...165,222,409
JBrowse link
G POMK protein O-mannose kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chr17:11,957,615...11,978,919 JBrowse link
G POU3F1 POU class 3 homeobox 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:94,025,133...94,028,053
Ensembl chr 6:94,026,675...94,028,030
JBrowse link
G POU3F2 POU class 3 homeobox 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:65,835,375...65,842,872
Ensembl chr 1:65,835,995...65,837,323
JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:49,804,112...49,807,730
Ensembl chr 3:49,806,161...49,807,666
JBrowse link
G POU3F4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:66,765,044...66,766,642
Ensembl chr  X:66,765,105...66,766,190
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:95,840,906...95,860,858
Ensembl chr 6:95,840,908...95,860,858
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 NCBI chr 4:79,687,375...79,850,146
Ensembl chr 4:79,687,375...79,846,656
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982
JBrowse link
G PRPF38B pre-mRNA processing factor 38B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:111,338,988...111,347,505
Ensembl chr 4:111,233,281...111,347,501
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9153393) Ensembl
MGI
PMID:9153393 GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003
JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,715,686...31,723,200
Ensembl chr13:31,715,689...31,723,197
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,756,368...16,893,148
Ensembl chr15:16,763,990...16,816,754
JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15789424) Ensembl
MGI
PMID:15789424 GO_REF:0000107 NCBI chr 1:161,679,154...161,683,486
Ensembl chr 1:161,678,955...161,683,060
JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chr 9:103,460,855...103,963,728
Ensembl chr 9:103,460,863...103,963,883
JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chr13:177,365,712...179,040,027
Ensembl chr13:177,365,772...179,013,542
JBrowse link
G ROGDI rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
ISO (PMID:25565929)
(PMID:38172607)
HGNC
MGI
PMID:25565929 PMID:38172607 NCBI chr 3:37,592,982...37,600,004
Ensembl chr 3:37,591,815...37,602,112
JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17553904), (PMID:17558409) Ensembl
MGI
PMID:17553904 PMID:17558409 GO_REF:0000107 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190
JBrowse link
G RTN1 reticulon 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:188,704,260...188,925,855
Ensembl chr 1:188,704,260...188,926,054
JBrowse link
G RTN4 reticulon 4 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:86,180,022...86,252,126
Ensembl chr 3:86,180,022...86,252,126
JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr 4:117,064,632...117,069,724
Ensembl chr 4:117,064,755...117,069,650
JBrowse link
G SCT secretin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:382,783...385,082
Ensembl chr 2:383,799...384,841
JBrowse link
G SCYL2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,813,207...83,878,766
Ensembl chr 5:83,813,206...83,878,760
JBrowse link
G SELENOP selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chr16:27,537,885...27,547,863
Ensembl chr16:27,537,885...27,631,130
JBrowse link
G SEPTIN4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chr12:34,772,776...34,785,176 JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,463,768...17,490,397
Ensembl chr 3:17,463,775...17,488,594
JBrowse link
G SHROOM4 shroom family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:44,301,956...44,543,969
Ensembl chr  X:44,332,620...44,543,337
JBrowse link
G SIX3 SIX homeobox 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:12569128) GO_Central
MGI
PMID:12569128 GO_REF:0000033 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436
JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674
JBrowse link
G SLC23A1 solute carrier family 23 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:141,258,318...141,277,555
Ensembl chr 2:141,258,323...141,276,442
JBrowse link
G SLC6A17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:109,919,153...109,974,235
Ensembl chr 4:109,919,151...109,974,235
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17035536) Ensembl
MGI
PMID:17035536 GO_REF:0000107 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,608,174...88,687,250
JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22516202) Ensembl
MGI
PMID:22516202 GO_REF:0000107 NCBI chr  X:106,039,961...106,116,156
Ensembl chr  X:106,039,969...106,116,139
JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,550,743...50,569,753
Ensembl chr 6:50,551,057...50,569,697
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197
JBrowse link
G SOX14 SRY-box transcription factor 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:78,620,818...78,621,702
Ensembl chr13:78,620,984...78,622,577
JBrowse link
G SOX21 SRY-box transcription factor 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:63,822,110...63,826,498
Ensembl chr11:63,825,637...63,826,467
JBrowse link
G SOX3 SRY-box transcription factor 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:115,017,704...115,020,601
Ensembl chr  X:115,019,232...115,020,578
JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:42,447,391...43,068,824
Ensembl chr 2:42,453,681...43,068,325
JBrowse link
G SPHK1 sphingosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr12:5,114,946...5,122,580
Ensembl chr12:5,114,947...5,120,083
JBrowse link
G SPHK2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr 6:53,982,911...53,986,779
Ensembl chr 6:53,979,012...53,986,768
JBrowse link
G SRY sex determining region Y involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:40,484,990...40,485,700
Ensembl chr  Y:40,484,990...40,485,700
JBrowse link
G STK36 serine/threonine kinase 36 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chr15:120,719,635...120,747,832
Ensembl chr15:120,719,646...120,754,065
JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15690082) Ensembl
MGI
PMID:15690082 GO_REF:0000107 NCBI chr 4:111,234,154...111,294,067
Ensembl chr 4:111,233,991...111,293,964
JBrowse link
G TBC1D23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:158,665,083...158,729,285
Ensembl chr13:158,665,077...158,729,274
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160
JBrowse link
G TMX2 thioredoxin related transmembrane protein 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 2:13,230,461...13,241,270
Ensembl chr 2:13,230,463...13,241,088
JBrowse link
G TUBGCP2 tubulin gamma complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:141,233,854...141,253,377
Ensembl chr14:141,233,856...141,253,359
JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11406614), (PMID:19286674) Ensembl
MGI
PMID:11406614 PMID:19286674 GO_REF:0000107 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322
JBrowse link
G UFC1 ubiquitin-fold modifier conjugating enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:89,296,281...89,311,331
Ensembl chr 4:89,296,282...89,302,941
JBrowse link
G UFM1 ubiquitin fold modifier 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:13,516,814...13,779,446
Ensembl chr11:13,765,497...13,774,294
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,975,450...78,032,471
Ensembl chr 3:77,975,441...78,031,703
JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr13:25,207,890...25,751,465
Ensembl chr13:25,209,368...25,751,500
JBrowse link
G UNC5C unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1401878), (PMID:9550145)
(PMID:10818148)
(PMID:9126743)
Ensembl
MGI
PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 GO_REF:0000107 NCBI chr 8:124,149,364...124,533,755
Ensembl chr 8:124,142,030...124,530,603
JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chr  X:98,184,646...98,206,135
Ensembl chr  X:98,182,272...98,206,096
JBrowse link
G UTP3 UTP3 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:67,475,971...67,477,587
Ensembl chr 8:67,476,089...67,479,001
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:10601036)
(PMID:10601035)
Ensembl
MGI
GO_Central
PMID:10601035 PMID:10601036 GO_REF:0000033 GO_REF:0000107 NCBI chr14:127,269,723...127,277,007
Ensembl chr14:127,271,566...127,275,744
JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:71,593,807...71,622,487
Ensembl chr 3:71,593,812...71,622,444
JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chr 4:37,085,929...37,821,159
Ensembl chr 4:37,090,936...37,820,419
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr 4:111,006,338...111,076,924
Ensembl chr 4:111,006,968...111,076,918
JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:87,740,769...87,750,258
Ensembl chr13:87,745,552...87,750,192
JBrowse link
G ZNF335 zinc finger protein 335 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr17:48,132,531...48,153,251
Ensembl chr17:48,132,404...48,153,181
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 1:1,569,652...1,698,475
Ensembl chr 1:1,570,272...1,698,694
JBrowse link
G AKT3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15713641) Ensembl
MGI
PMID:15713641 GO_REF:0000107 NCBI chr10:16,441,465...16,741,745
Ensembl chr10:16,441,447...16,741,337
JBrowse link
G BBS1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr 2:5,886,989...5,906,468
Ensembl chr 2:5,886,990...5,906,388
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chr 6:18,542,383...18,575,338
Ensembl chr 6:18,542,386...18,575,514
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr 7:60,631,913...60,693,359
Ensembl chr 7:60,631,914...60,693,334
JBrowse link
G CDH2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583) Ensembl
MGI
PMID:25100583 GO_REF:0000107 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432
JBrowse link
G CTNNA2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr 3:63,205,073...64,417,990
Ensembl chr 3:63,205,084...63,455,471
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23178126)
(PMID:25100583)
Ensembl
MGI
PMID:23178126 PMID:25100583 GO_REF:0000107 NCBI chr 3:69,842,061...69,863,940
Ensembl chr 3:69,839,890...69,859,731
JBrowse link
G FANCC FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr10:26,796,546...27,055,271
Ensembl chr10:26,796,572...27,061,801
JBrowse link
G FANCD2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr13:66,241,951...66,308,601
Ensembl chr13:66,241,967...66,310,433
JBrowse link
G FOXO3 forkhead box O3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr 1:74,626,673...74,760,323
Ensembl chr 1:74,628,218...74,760,325
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17954912) Ensembl
MGI
PMID:17954912 GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745
JBrowse link
G MIR124A-2 microRNA mir-124a-2 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr14:13,201,425...13,201,509
Ensembl chr14:13,201,425...13,201,509
JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr17:19,341,024...19,363,007
Ensembl chr17:19,341,636...19,362,871
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969
JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17614943) Ensembl
MGI
PMID:17614943 GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chr10:14,532,556...14,561,862
Ensembl chr10:14,532,767...14,577,251
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr14:99,929,590...100,021,619 JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chr 5:41,376...93,033
Ensembl chr 5:41,786...93,177
JBrowse link
G SLC4A10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18165320) Ensembl
MGI
PMID:18165320 GO_REF:0000107 NCBI chr15:68,342,607...68,655,009
Ensembl chr15:68,224,395...68,656,309
JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,285,995...46,328,377
Ensembl chr12:46,285,997...46,314,378
JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chr16:21,088,463...21,264,591
Ensembl chr16:21,088,386...21,265,592
JBrowse link
G VPS51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,081,607...7,094,898
Ensembl chr 2:7,081,608...7,098,641
JBrowse link
G ZNF335 zinc finger protein 335 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23178126) Ensembl
MGI
PMID:23178126 GO_REF:0000107 NCBI chr17:48,132,531...48,153,251
Ensembl chr17:48,132,404...48,153,181
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7903221) Ensembl
MGI
PMID:7903221 GO_REF:0000107 NCBI chr14:66,280,665...66,291,308
Ensembl chr14:66,284,581...66,291,299
JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9367425) Ensembl
MGI
PMID:9367425 GO_REF:0000107 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876
JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7925021) Ensembl
MGI
PMID:7925021 GO_REF:0000107 NCBI chr17:43,408,390...43,411,782
Ensembl chr17:43,404,927...43,411,739
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:18579678) Ensembl
MGI
PMID:18579678 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237
JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chr 8:110,200,681...110,206,081
Ensembl chr 8:110,201,161...110,201,979
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15548218) Ensembl
MGI
PMID:15548218 GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:31,335,102...31,890,523
Ensembl chr18:31,335,264...31,888,845
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707
JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chr13:71,981,139...71,997,626
Ensembl chr13:71,984,067...71,997,619
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17922007) Ensembl
MGI
PMID:17922007 GO_REF:0000107 NCBI chr 8:32,841,425...32,846,133
Ensembl chr 8:32,842,145...32,846,127
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:39,229,392...39,234,304
Ensembl chr 2:39,229,356...39,234,969
JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,997,638...112,000,550
Ensembl chr 1:111,997,642...112,000,550
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3723363|PMID:17573818) UniProt
Ensembl
PMID:17573818 GO_REF:0000107 MGI:3723363 NCBI chr 4:104,852,287...104,858,042
Ensembl chr 4:104,857,635...104,858,042
JBrowse link
G POU4F1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8955272) Ensembl
MGI
PMID:8955272 GO_REF:0000107 NCBI chr11:50,729,746...50,732,626
Ensembl chr11:50,730,428...50,732,539
JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,750,745...56,760,835
Ensembl chr 3:56,750,760...56,760,828
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:25099998) Ensembl
MGI
PMID:25099998 GO_REF:0000107 NCBI chr 3:7,248,806...7,387,523
Ensembl chr 3:7,248,827...7,387,518
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,022
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10970885) Ensembl
MGI
PMID:10970885 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15677725) Ensembl
MGI
PMID:15677725 GO_REF:0000107 NCBI chr  X:21,067,631...21,079,850
Ensembl chr  X:21,067,621...21,079,723
JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:58,606,441...58,963,954
Ensembl chr14:58,606,464...58,963,563
JBrowse link
G DIXDC1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 9:39,666,454...39,734,909 JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10729342) Ensembl
MGI
PMID:10729342 GO_REF:0000107 NCBI chr14:127,649,675...127,656,972
Ensembl chr14:127,650,688...127,655,706
JBrowse link
G FABP7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chr 1:39,872,198...39,876,272
Ensembl chr 1:39,871,537...39,876,397
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16613831) Ensembl
MGI
PMID:16613831 GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,123,379...23,177,919
Ensembl chr10:23,123,480...23,174,273
JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10325223) Ensembl
MGI
PMID:10325223 GO_REF:0000107 NCBI chr14:38,446,781...38,456,460
Ensembl chr14:38,446,899...38,456,404
JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr14:28,642,774...28,819,404
Ensembl chr14:28,624,702...28,819,404
JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567
JBrowse link
G NGF nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,749...105,307,837
JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr 9:6,026,151...6,065,211
Ensembl chr 9:6,025,073...6,065,143
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454
JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,288...3,572,314
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr 6:53,097,162...53,111,563
Ensembl chr 6:53,097,142...53,111,565
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chr14:12,281,127...12,394,768
Ensembl chr14:12,281,155...12,390,530
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chr 4:33,811,159...33,844,556
Ensembl chr 4:33,809,809...33,844,656
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,786...15,014,998
JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,945,825...28,993,969
Ensembl chr18:28,946,326...28,993,961
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chr 6:154,156,595...155,374,403
Ensembl chr 6:154,936,460...155,374,399
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:86,585,225...86,784,316
Ensembl chr 3:86,585,054...86,784,149
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCTN1 tectonic family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16357211) Ensembl
MGI
PMID:16357211 GO_REF:0000107 NCBI chr14:31,953,996...32,010,202
Ensembl chr14:31,954,000...32,010,185
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:36,271,154...36,300,240
Ensembl chr  X:36,271,222...36,304,181
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,944,386...23,957,567
Ensembl chr13:23,944,369...23,957,486
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,786...15,014,998
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr 2:15,680,723...15,790,580
Ensembl chr 2:15,680,787...15,790,569
JBrowse link
G CNTN1 contactin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,168,496...72,495,454
Ensembl chr 5:72,168,511...72,495,633
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17952069) Ensembl
MGI
PMID:17952069 GO_REF:0000107 NCBI chr 6:51,734,318...51,757,508
Ensembl chr 6:51,734,320...51,757,553
JBrowse link
G MAG myelin associated glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:44,794,197...44,809,933
Ensembl chr 6:44,794,204...44,809,926
JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:77,851,764...77,892,417
Ensembl chr 9:77,851,765...77,893,216
JBrowse link
G MOBP myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr13:24,138,078...24,186,838 JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:13,040,615...13,826,957
Ensembl chr 9:13,045,196...13,820,420
JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,993...75,428,330
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,595...11,349,764
JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21491498)
(PMID:18815260)
Ensembl
MGI
PMID:18815260 PMID:21491498 GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818
JBrowse link
G MYRF myelin regulatory factor involved_in ISO (MGI:5437779|PMID:22956843) UniProt PMID:22956843 MGI:5437779 NCBI chr 2:9,761,230...9,795,873 JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr14:99,929,590...100,021,619 JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr12:49,612,845...49,630,303
Ensembl chr12:49,610,519...49,641,864
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,813...51,334,020
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270
JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chr 9:65,737,488...65,776,412
Ensembl chr 9:65,736,740...65,776,396
JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,141,222...20,157,341
Ensembl chr12:20,141,641...20,157,044
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964
JBrowse link
G GPM6B glycoprotein M6B involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:10,429,496...10,582,768
Ensembl chr  X:10,430,301...10,582,354
JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:17006542) MGI PMID:17006542 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881
JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,757...15,282,839
JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17942730) Ensembl
MGI
PMID:17942730 GO_REF:0000107 NCBI chr 4:90,421,956...90,457,406
Ensembl chr 4:90,422,025...90,457,406
JBrowse link
G MAG myelin associated glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:44,794,197...44,809,933
Ensembl chr 6:44,794,204...44,809,926
JBrowse link
G MAL mal, T cell differentiation protein acts_upstream_of ISO (PMID:15337780) MGI PMID:15337780 NCBI chr 3:46,223,610...46,242,306
Ensembl chr 3:46,181,555...46,242,047
JBrowse link
G MYRF myelin regulatory factor involved_in ISO (MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:19596243 PMID:24204311 PMID:27532821 MGI:3850982 MGI:5544144 MGI:5805298 NCBI chr 2:9,761,230...9,795,873 JBrowse link
G NCSTN nicastrin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27008863) Ensembl
MGI
PMID:27008863 GO_REF:0000107 NCBI chr 4:90,121,209...90,142,934
Ensembl chr 4:90,119,002...90,142,890
JBrowse link
G NKX6-2 NK6 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15601927) Ensembl
MGI
PMID:15601927 GO_REF:0000107 NCBI chr14:140,895,622...140,899,114
Ensembl chr14:140,897,874...140,899,155
JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:1694232) Ensembl
TreeGrafter
MGI
GO_Central
PMID:1694232 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:84,676,627...84,683,517
Ensembl chr  X:84,666,733...84,685,058
JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:9,890,439...9,901,746
Ensembl chr 5:9,891,525...9,901,743
JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chr13:25,207,890...25,751,465
Ensembl chr13:25,209,368...25,751,500
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP35 Rho GTPase activating protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,711,463...52,841,295
Ensembl chr 6:52,711,901...52,841,288
JBrowse link
G ARHGEF28 Rho guanine nucleotide exchange factor 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15378065) Ensembl
MGI
PMID:15378065 GO_REF:0000107 NCBI chr 2:82,760,754...83,102,126
Ensembl chr 2:82,761,521...83,102,121
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,654
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,813...51,334,020
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15208636) Ensembl
MGI
PMID:15208636 GO_REF:0000107 NCBI chr12:53,553,897...53,640,470
Ensembl chr12:53,557,175...53,640,457
JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chr14:99,929,590...100,021,619 JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGBL4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chr 6:161,953,495...163,216,282 JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30420556) Ensembl
MGI
PMID:30420556 GO_REF:0000107 NCBI chr10:29,440,150...29,590,457
Ensembl chr10:29,440,145...29,590,454
JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15169849)
(PMID:16469766)
Ensembl
MGI
PMID:15169849 PMID:16469766 GO_REF:0000107 NCBI chr 5:81,357,431...81,360,335
Ensembl chr 5:81,358,969...81,359,673
JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048
JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:259,350,359...259,544,604
Ensembl chr 1:259,350,367...259,544,576
JBrowse link
G BTG2 BTG anti-proliferation factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20020054) Ensembl
MGI
PMID:20020054 GO_REF:0000107 NCBI chr 9:64,033,853...64,037,795
Ensembl chr 9:64,031,832...64,035,837
JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:8855328) MGI PMID:8855328 NCBI chr18:6,166,914...6,171,157 JBrowse link
G FGF8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724
JBrowse link
G FOXG1 forkhead box G1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16680166) Ensembl
MGI
PMID:16680166 GO_REF:0000107 NCBI chr 7:70,656,603...70,660,236
Ensembl chr 7:70,658,685...70,660,145
JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr 8:36,978,014...37,354,950
Ensembl chr 8:36,978,547...37,355,008
JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chr13:71,981,139...71,997,626
Ensembl chr13:71,984,067...71,997,619
JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,456,238...236,467,887
Ensembl chr 1:236,455,240...236,468,210
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9886073) Ensembl
MGI
PMID:9886073 GO_REF:0000107 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,204...110,357,894
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10592285) Ensembl
MGI
PMID:10592285 GO_REF:0000107 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chr 7:57,684,591...57,890,121
Ensembl chr 7:57,684,589...57,890,126
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chr 1:267,207,273...267,290,862
Ensembl chr 1:267,207,419...267,287,729
JBrowse link
G MAP2 microtubule associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:112,156,578...112,462,932
Ensembl chr15:112,236,119...112,462,929
JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chr 8:110,200,681...110,206,081
Ensembl chr 8:110,201,161...110,201,979
JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,248,587...52,278,519
Ensembl chr 6:52,247,929...52,278,525
JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:47,985,796...47,993,726
Ensembl chr18:47,985,725...47,992,667
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882
JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:90,955,524...91,055,923
Ensembl chr 7:90,984,394...91,055,620
JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,597,067...45,750,117
Ensembl chr12:45,597,072...45,744,356
JBrowse link
G TTC36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (PMID:31537781) MGI PMID:31537781 NCBI chr 9:45,829,014...45,838,978
Ensembl chr 9:45,829,191...45,838,979
JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18215621) Ensembl
MGI
PMID:18215621 GO_REF:0000107 NCBI chr 7:120,205,008...120,295,737
Ensembl chr 7:120,205,008...120,295,936
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406
JBrowse link
G BRINP2 BMP/retinoic acid inducible neural specific 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:118,967,670...119,095,345
Ensembl chr 9:118,975,719...119,095,336
JBrowse link
G BRINP3 BMP/retinoic acid inducible neural specific 3 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr10:2,963,237...3,367,629
Ensembl chr10:2,963,527...3,367,623
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chr 2:65,491,784...65,871,068
Ensembl chr 2:65,514,509...65,871,182
JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr18:45,477,561...45,480,306
Ensembl chr18:45,477,461...45,480,152
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17670789)
(PMID:15148302)
Ensembl
MGI
PMID:15148302 PMID:17670789 GO_REF:0000107 NCBI chr 4:85,403,287...85,570,738
Ensembl chr 4:85,406,223...85,571,443
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chr18:29,426,044...29,541,526
Ensembl chr18:29,426,048...29,541,512
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chr18:1,724,930...1,730,724
Ensembl chr18:1,725,244...1,730,878
JBrowse link
G NKX6-1 NK6 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19592574) Ensembl
MGI
PMID:19592574 GO_REF:0000107 NCBI chr 8:134,137,064...134,143,524
Ensembl chr 8:134,138,097...134,144,254
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:11113533) Ensembl
TreeGrafter
MGI
GO_Central
PMID:11113533 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:63,487,051...63,506,249
Ensembl chr15:63,487,731...63,495,299
JBrowse link
G POU4F1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8955272)
(PMID:8876243)
Ensembl
MGI
PMID:8876243 PMID:8955272 GO_REF:0000107 NCBI chr11:50,729,746...50,732,626
Ensembl chr11:50,730,428...50,732,539
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571630) Ensembl
MGI
PMID:16571630 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898
JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr 5:49,159,950...50,166,463
Ensembl chr 5:49,504,551...50,161,558
JBrowse link
G SPOCK1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chr 2:139,018,177...139,523,601
Ensembl chr 2:139,018,179...139,522,593
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chr 6:164,282,242...164,297,636
Ensembl chr 6:164,283,366...164,295,290
JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19286674) Ensembl
MGI
PMID:19286674 GO_REF:0000107 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 4:69,801,619...69,803,375
Ensembl chr 4:69,802,200...69,803,309
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr11:11,815,258...12,159,085
Ensembl chr11:11,815,357...12,158,826
JBrowse link
G DCX doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr  X:91,317,671...91,644,572
Ensembl chr  X:91,323,764...91,644,567
JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chr13:75,904,678...76,351,540
Ensembl chr13:75,905,676...76,345,534
JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chr 6:80,649,098...80,849,979
Ensembl chr 6:80,650,740...80,843,567
JBrowse link
G EPHB3 EPH receptor B3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chr13:122,467,561...122,488,296
Ensembl chr13:122,467,588...122,488,292
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18031680) Ensembl
MGI
PMID:18031680 GO_REF:0000107 NCBI chr11:49,163,969...49,432,865
Ensembl chr11:49,163,684...49,432,583
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10585298) Ensembl
MGI
PMID:10585298 GO_REF:0000107 NCBI chr15:63,487,051...63,506,249
Ensembl chr15:63,487,731...63,495,299
JBrowse link
G PRDM8 PR/SET domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22284184) Ensembl
MGI
PMID:22284184 GO_REF:0000107 NCBI chr 8:137,604,805...137,611,389
Ensembl chr 8:137,605,600...137,612,651
JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:17197442) Ensembl
TreeGrafter
MGI
GO_Central
PMID:17197442 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:48,729,839...48,812,799
Ensembl chr 6:48,729,419...48,812,796
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZIC2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr11:68,840,802...68,845,441
Ensembl chr11:68,840,631...68,845,378
JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:8855328) MGI PMID:8855328 NCBI chr18:6,166,914...6,171,157 JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:13,282,157...13,285,208
Ensembl chr 2:13,282,164...13,285,162
JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr 9:39,666,454...39,734,909 JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20798045) Ensembl
MGI
PMID:20798045 GO_REF:0000107 NCBI chr 9:109,384,976...109,450,943
Ensembl chr 9:109,385,015...109,450,941
JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr 1:246,852,387...246,916,650 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,123,379...23,177,919
Ensembl chr10:23,123,480...23,174,273
JBrowse link
G NAV2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chr 2:39,263,939...40,083,539
Ensembl chr 2:39,266,926...40,078,124
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,709,473...22,713,785
Ensembl chr12:22,709,609...22,713,778
JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:10407039) MGI PMID:10407039 NCBI chr18:6,166,914...6,171,157 JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr 1:164,381,892...164,469,313
Ensembl chr 1:164,381,845...164,471,226
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28556830) Ensembl
MGI
PMID:28556830 GO_REF:0000107 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,738...51,403,998
JBrowse link
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr 5:22,736,325...22,747,421
Ensembl chr 5:22,739,900...22,747,421
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567
JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898
JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:84,293,613...84,300,015
Ensembl chr 6:84,293,619...84,300,010
JBrowse link
G TUBA1A tubulin alpha 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,186,059...15,190,211
Ensembl chr 5:15,185,532...15,190,428
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,865...36,885,250
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,779,329...15,813,029
Ensembl chr 5:15,779,334...15,812,543
JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,130,787...16,133,791
Ensembl chr 2:16,130,788...16,133,510
JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr 1:128,489,676...128,640,094
Ensembl chr 1:128,489,744...128,635,511
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:20153830) GO_Central
MGI
PMID:20153830 GO_REF:0000033 NCBI chr 2:487,817...490,704
Ensembl chr 2:487,821...490,699
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17409116) Ensembl
MGI
PMID:17409116 GO_REF:0000107 NCBI chr15:125,748,383...125,777,788
Ensembl chr15:125,748,394...125,816,215
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,123,379...23,177,919
Ensembl chr10:23,123,480...23,174,273
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,323...66,897,128
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,516,097...35,518,080
Ensembl chr 6:35,515,754...35,519,517
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:125,821,195...127,130,617
Ensembl chr 8:125,819,951...127,129,763
JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) MGI PMID:17984326 NCBI chr14:141,132,374...141,188,343
Ensembl chr14:141,132,350...141,188,342
JBrowse link
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr18:13,330,049...13,395,297
Ensembl chr18:13,330,029...13,395,460
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:23042739)
MGI PMID:21800304 PMID:23042739 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034
JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:54,056,504...54,617,045
Ensembl chr  X:54,055,092...54,616,959
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982
JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,282...22,028,450
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr14:23,423,693...23,448,130
Ensembl chr14:23,423,698...23,448,136
JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9405095) Ensembl
MGI
PMID:9405095 GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,945,067...54,950,142
Ensembl chr 6:54,945,119...54,950,137
JBrowse link
G BRWD1 bromodomain and WD repeat domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20498273) Ensembl
MGI
PMID:20498273 GO_REF:0000107 NCBI chr13:202,762,509...202,775,601
Ensembl chr13:202,762,512...202,775,642
JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of
IEA
ISO
(PMID:10027293) Ensembl
MGI
PMID:10027293 GO_REF:0000107 NCBI chr 8:112,235,607...112,330,062
Ensembl chr 8:112,234,386...112,330,046
JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916
JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16651541) Ensembl
MGI
PMID:16651541 GO_REF:0000107 NCBI chr15:136,029,393...136,032,568
Ensembl chr15:136,029,070...136,032,316
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chr 6:68,954,766...69,258,855 JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:111,375,457...111,477,703
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10027293) Ensembl