Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
go back to main search page
Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:16,093,552...16,156,655 JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624780:5,757,535...5,793,794
Ensembl chrNW_004624780:5,752,846...5,793,846
JBrowse link
G Aldh3a2 aldehyde dehydrogenase 3 family member A2 involved_in ISO (PMID:8528251) UniProt PMID:8528251 NCBI chrNW_004624849:5,911,711...5,941,706
Ensembl chrNW_004624849:5,912,273...5,938,007
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 involved_in ISO (PMID:9683595) UniProt PMID:9683595 NCBI chrNW_004624756:2,464,912...2,500,773
Ensembl chrNW_004624756:2,464,899...2,501,130
JBrowse link
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO (PMID:25259927) UniProt PMID:25259927 NCBI chrNW_004624747:28,086,967...28,136,514
Ensembl chrNW_004624747:28,088,544...28,131,907
JBrowse link
G Aplp1 amyloid beta precursor like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:10,148,575...10,158,101
Ensembl chrNW_004624794:10,148,522...10,167,543
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:4,490,798...4,571,500
Ensembl chrNW_004624812:4,490,798...4,571,623
JBrowse link
G App amyloid beta precursor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (MGI:2157648|PMID:11318878) UniProt PMID:11318878 MGI:2157648 NCBI chrNW_004624768:21,166,554...21,319,462
Ensembl chrNW_004624768:21,166,554...21,319,594
JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO (PMID:11384981) UniProt PMID:11384981 NCBI chrNW_004624730:73,122,977...73,167,713
Ensembl chrNW_004624730:73,152,728...73,153,867
JBrowse link
G Bcan brevican involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:1,816,591...1,829,971
Ensembl chrNW_004624885:1,820,105...1,832,510
JBrowse link
G Capg capping actin protein, gelsolin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:17,706,582...17,764,087
Ensembl chrNW_004624749:17,723,715...17,746,346
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:9556299) BHF-UCL PMID:9556299 NCBI chrNW_004624744:31,103,053...31,302,314
Ensembl chrNW_004624744:31,103,059...31,235,623
JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chrNW_004624730:72,201,239...72,209,843
Ensembl chrNW_004624730:72,201,644...72,209,843
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:11823447) MGI PMID:11823447 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chrNW_004624816:4,273,969...4,304,519
Ensembl chrNW_004624816:4,274,219...4,304,513
JBrowse link
G Dazap1 DAZ associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,258,582...7,283,931
Ensembl chrNW_004624828:7,254,361...7,284,006
JBrowse link
G Dhx30 DExH-box helicase 30 involved_in ISO (MGI:5616495|PMID:25219788) UniProt PMID:25219788 MGI:5616495 NCBI chrNW_004624730:73,656,378...73,685,863
Ensembl chrNW_004624730:73,656,361...73,681,999
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:2183620|PMID:12055180) UniProt PMID:12055180 MGI:2183620 NCBI chrNW_004624906:2,396,426...2,402,705
Ensembl chrNW_004624906:2,396,435...2,401,379
JBrowse link
G Dner delta/notch like EGF repeat containing involved_in ISO (PMID:11950833) UniProt PMID:11950833 NCBI chrNW_004624843:3,238,390...3,552,566
Ensembl chrNW_004624843:3,237,270...3,552,551
JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:9,947,366...9,956,876
Ensembl chrNW_004624749:9,947,188...9,956,983
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,682,521...26,688,490
Ensembl chrNW_004624734:26,682,521...26,688,559
JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:22,838,077...22,904,627
Ensembl chrNW_004624758:22,837,374...22,903,714
JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:20675713) MGI PMID:20675713 NCBI chrNW_004624832:6,849,001...6,858,931
Ensembl chrNW_004624832:6,849,005...6,857,898
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chrNW_004624883:645,524...681,705
Ensembl chrNW_004624883:645,449...682,292
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within ISO (PMID:17005728) MGI PMID:17005728 NCBI chrNW_004624761:20,071,343...20,132,523
Ensembl chrNW_004624761:20,071,316...20,132,098
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:18346921) MGI PMID:18346921 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624868:5,045,566...5,056,419
Ensembl chrNW_004624868:5,045,594...5,056,416
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:12435628)
(PMID:12435629)
MGI PMID:12435628 PMID:12435629 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within ISO (PMID:11787818) MGI PMID:11787818 NCBI chrNW_004624764:8,753,343...8,783,891
Ensembl chrNW_004624764:8,753,567...8,783,162
JBrowse link
G Gsn gelsolin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO (PMID:11731457), (PMID:12724834) MGI PMID:11731457 PMID:12724834 NCBI chrNW_004624761:15,387,217...15,389,404
Ensembl chrNW_004624761:15,387,674...15,389,229
JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:3,789,999...3,855,142
Ensembl chrNW_004624743:3,789,757...3,855,107
JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:16,146,374...16,170,598
Ensembl chrNW_004624768:16,158,506...16,170,558
JBrowse link
G Helt helt bHLH transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16968817) Ensembl
MGI
PMID:16968817 GO_REF:0000107 NCBI chrNW_004624769:15,851,432...15,854,088
Ensembl chrNW_004624769:15,852,025...15,856,041
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in ISO (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chrNW_004624764:8,175,841...8,177,444
Ensembl chrNW_004624764:8,175,372...8,177,451
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:9889105)
(PMID:9875844)
(PMID:10911993)
MGI PMID:9875844 PMID:9889105 PMID:10911993 NCBI chrNW_004624793:3,699,394...3,706,591
Ensembl chrNW_004624793:3,699,506...3,706,073
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302) Ensembl
MGI
PMID:15148302 GO_REF:0000107 NCBI chrNW_004624826:3,541,291...3,689,039
Ensembl chrNW_004624826:3,543,191...3,689,062
JBrowse link
G LOC101699044 cytochrome P450 26A1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chrNW_004624737:4,324,964...4,329,488
Ensembl chrNW_004624737:4,325,755...4,329,758
JBrowse link
G LOC101708363 cytochrome P450 26C1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17067568) Ensembl
MGI
PMID:17067568 GO_REF:0000107 NCBI chrNW_004624737:4,312,711...4,323,833
Ensembl chrNW_004624737:4,312,772...4,320,978
JBrowse link
G LOC101715696 cytochrome c oxidase subunit 7B, mitochondrial involved_in ISO (PMID:23122588) UniProt PMID:23122588 NCBI chrNW_004624836:3,063,775...3,069,063 JBrowse link
G LOC101720937 amyloid-like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:10,158,833...10,167,427 JBrowse link
G Marcksl1 MARCKS like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:15,552,195...15,554,576
Ensembl chrNW_004624764:15,552,956...15,554,370
JBrowse link
G Msi1 musashi RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:13,290,999...13,316,410
Ensembl chrNW_004624747:13,291,071...13,316,532
JBrowse link
G Msi2 musashi RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:12,230,756...12,603,360
Ensembl chrNW_004624795:12,230,802...12,596,419
JBrowse link
G Ndn necdin, MAGE family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15649943) Ensembl
MGI
PMID:15649943 GO_REF:0000107 NCBI chrNW_004624768:579,607...581,302 JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759
JBrowse link
G Neurod4 neuronal differentiation 4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624983:79,564...89,114
Ensembl chrNW_004624983:85,494...86,486
JBrowse link
G Neurod6 neuronal differentiation 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624783:533,727...537,180
Ensembl chrNW_004624783:534,295...537,166
JBrowse link
G Ngfr nerve growth factor receptor acts_upstream_of_or_within ISO (PMID:11978834) MGI PMID:11978834 NCBI chrNW_004624795:5,623,686...5,639,545
Ensembl chrNW_004624795:5,623,700...5,639,655
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISO (PMID:35108495)
(MGI:2447374|PMID:12182881)
UniProt PMID:12182881 PMID:35108495 MGI:2447374 NCBI chrNW_004624739:21,308,457...21,633,627 JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11731459)
(PMID:12652306)
MGI PMID:11731459 PMID:12652306 NCBI chrNW_004624884:1,830,645...1,840,213 JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:13,291,880...13,358,066
Ensembl chrNW_004624749:13,300,606...13,357,903
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within ISO (MGI:1861161|PMID:10854042) UniProt PMID:10854042 MGI:1861161 NCBI chrNW_004624828:5,551,538...5,572,647
Ensembl chrNW_004624828:5,551,749...5,572,570
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:12091320) MGI PMID:12091320 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11900467) InterPro
MGI
PMID:11900467 GO_REF:0000002 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Scin scinderin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:17,303,805...17,384,105
Ensembl chrNW_004624739:17,304,486...17,384,050
JBrowse link
G Sema6b semaphorin 6B involved_in ISO (PMID:32169168) UniProt PMID:32169168 NCBI chrNW_004624828:5,170,745...5,193,568
Ensembl chrNW_004624828:5,182,812...5,192,486
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:12435628) MGI PMID:12435628 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Slc2a1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (PMID:10227690), (PMID:1714544) ARUK-UCL PMID:1714544 PMID:10227690 NCBI chrNW_004624892:2,110,310...2,148,023
Ensembl chrNW_004624892:2,117,561...2,148,037
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12435628) MGI
TreeGrafter
PMID:12435628 GO_REF:0000118 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624833:6,947,611...7,144,688
Ensembl chrNW_004624833:6,947,273...7,089,924
JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chrNW_004624763:5,568,079...5,886,722
Ensembl chrNW_004624763:5,564,835...5,886,769
JBrowse link
G Stk4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chrNW_004624790:9,415,172...9,521,103
Ensembl chrNW_004624790:9,415,177...9,521,051
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within ISO (PMID:19624305) MGI PMID:19624305 NCBI chrNW_004624892:2,703,898...2,754,130
Ensembl chrNW_004624892:2,703,936...2,756,565
JBrowse link
G Thoc6 THO complex subunit 6 involved_in ISO (PMID:23621916) UniProt PMID:23621916 NCBI chrNW_004624824:764,185...772,426
Ensembl chrNW_004624824:768,082...774,688
Ensembl chrNW_004624824:768,082...774,688
JBrowse link
G Tlx1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chrNW_004624831:710,787...717,367
Ensembl chrNW_004624831:710,389...717,339
JBrowse link
G Tlx3 T cell leukemia homeobox 3 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chrNW_004624733:18,760,060...18,762,909
Ensembl chrNW_004624733:18,759,941...18,762,854
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:16199867) MGI PMID:16199867 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218
JBrowse link
G Tp53bp2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chrNW_004624835:5,744,973...5,790,840
Ensembl chrNW_004624835:5,744,543...5,790,603
JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:8,104,934...8,111,049
Ensembl chrNW_004624817:8,104,939...8,111,035
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601035)
(PMID:10601036)
MGI PMID:10601035 PMID:10601036 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483
JBrowse link
G Vcan versican involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:3,635,086...3,743,332 JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in ISO (MGI:6393201|PMID:31495077) UniProt PMID:31495077 MGI:6393201 NCBI chrNW_004624763:6,101,943...6,866,457
Ensembl chrNW_004624763:6,102,674...6,864,817
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (PMID:28675177) MGI PMID:28675177 NCBI chrNW_004624792:9,098,291...9,128,931 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004624743:3,299,329...3,549,182
Ensembl chrNW_004624743:3,317,351...3,552,161
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:9,545,529...9,726,960
Ensembl chrNW_004624784:9,546,509...9,726,960
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chrNW_004624805:3,964,448...4,044,546
Ensembl chrNW_004624805:3,964,450...4,042,527
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997
JBrowse link
G Zic1 Zic family member 1 acts_upstream_of_or_within ISO (PMID:11756505)
(PMID:9412507)
MGI PMID:9412507 PMID:11756505 NCBI chrNW_004624730:24,440,717...24,444,663
Ensembl chrNW_004624730:24,440,192...24,448,421
JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:11756505) MGI PMID:11756505 NCBI chrNW_004624793:11,162,835...11,167,497
Ensembl chrNW_004624793:11,163,916...11,167,457
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:21533046) MGI PMID:21533046 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:9140068) MGI PMID:9140068 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529
JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within ISO (PMID:15985453) MGI PMID:15985453 NCBI chrNW_004625146:5,484...8,763
Ensembl chrNW_004625146:6,381...13,318
JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO (PMID:1270792), (PMID:1329576), (PMID:1504465) MGI PMID:1270792 PMID:1329576 PMID:1504465 NCBI chrNW_004624783:200,935...214,453
Ensembl chrNW_004624783:200,940...214,373
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO (PMID:8631293) MGI PMID:8631293 NCBI chrNW_004624776:10,704,726...10,707,108
Ensembl chrNW_004624776:10,705,843...10,707,093
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chrNW_004624789:3,589,863...3,605,655
Ensembl chrNW_004624789:3,592,214...3,605,537
JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chrNW_004624733:41,852,638...41,856,493
Ensembl chrNW_004624733:41,850,474...41,856,459
JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO (PMID:9247269) MGI PMID:9247269 NCBI chrNW_004624751:694,165...720,287
Ensembl chrNW_004624751:694,099...719,465
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chrNW_004624731:14,121,855...14,139,344
Ensembl chrNW_004624731:14,122,608...14,138,121
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) CACAO PMID:18778775 MGI:3821675 NCBI chrNW_004624934:1,145,982...1,220,177
Ensembl chrNW_004624934:1,146,000...1,215,922
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:12527005) MGI PMID:12527005 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004624863:442,465...609,159
Ensembl chrNW_004624863:439,541...525,918
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:24441682) MGI PMID:24441682 NCBI chrNW_004624732:4,043,867...4,052,621
Ensembl chrNW_004624732:4,043,867...4,052,551
JBrowse link
G Uba6 ubiquitin like modifier activating enzyme 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23499007) Ensembl
MGI
PMID:23499007 GO_REF:0000107 NCBI chrNW_004624761:1,262,172...1,351,606
Ensembl chrNW_004624761:1,262,345...1,349,964
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583
JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) UniProt PMID:23206892 MGI:5467661 NCBI chrNW_004624818:1,253,968...1,274,418
Ensembl chrNW_004624818:1,256,169...1,263,904
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO (PMID:19398581) MGI PMID:19398581 NCBI chrNW_004624730:61,667,177...61,684,162 JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:11997145) MGI PMID:11997145 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chrNW_004624783:3,831,320...4,292,594
Ensembl chrNW_004624783:3,658,835...4,285,638
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
ISO (MGI:5467661|PMID:23206892)
(PMID:21055390)
UniProt
MGI
PMID:21055390 PMID:23206892 MGI:5467661 NCBI chrNW_004624817:364,543...379,742
Ensembl chrNW_004624817:366,101...373,034
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624772:4,749,748...4,821,490
Ensembl chrNW_004624772:4,750,931...4,806,717
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chrNW_004624747:9,846,254...9,860,938
Ensembl chrNW_004624747:9,851,153...9,860,094
JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Bace2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chrNW_004624745:28,690,045...28,765,506
Ensembl chrNW_004624745:28,690,149...28,765,588
JBrowse link
G C1qa complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:7,363,615...7,366,408
Ensembl chrNW_004624764:7,363,567...7,366,617
JBrowse link
G C5ar1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:6,413,169...6,423,394
Ensembl chrNW_004624832:6,414,587...6,423,394
JBrowse link
G Cntf ciliary neurotrophic factor involved_in ISO
IEA
spinal cord astrocytes RGD
TreeGrafter
PMID:11771938 GO_REF:0000118 RGD:1626172 NCBI chrNW_004624864:1,785,215...1,788,608
Ensembl chrNW_004624864:1,782,139...1,792,879
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271
JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chrNW_004624886:618,372...640,954
Ensembl chrNW_004624886:618,289...642,928
JBrowse link
G Il1b interleukin 1 beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28377412) Ensembl
MGI
PMID:28377412 GO_REF:0000107 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:26607664) MGI PMID:26607664 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:20445063) ARUK-UCL PMID:20445063 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6095556|PMID:29073081) ARUK-UCL PMID:29073081 MGI:6095556 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372
JBrowse link
G Grn granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chrNW_004624802:10,734,907...10,812,888
Ensembl chrNW_004624802:10,734,263...10,812,763
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chrNW_004624730:72,417,069...72,428,194
Ensembl chrNW_004624730:72,417,856...72,428,093
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chrNW_004624795:395,298...400,781
Ensembl chrNW_004624795:394,436...401,231
JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004624730:3,145,643...3,158,781
Ensembl chrNW_004624730:3,145,643...3,159,101
JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004624760:4,759,680...4,807,720
Ensembl chrNW_004624760:4,760,351...4,807,720
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004624954:135,065...150,911
Ensembl chrNW_004624954:133,105...150,953
JBrowse link
G Ror1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004624742:30,172,458...30,474,801
Ensembl chrNW_004624742:30,172,093...30,319,067
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004624868:479,303...732,723
Ensembl chrNW_004624868:479,290...731,650
JBrowse link
G S100a8 S100 calcium binding protein A8 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chrNW_004624885:784,528...785,623 JBrowse link
G S100a9 S100 calcium binding protein A9 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22577135) MGI
TreeGrafter
PMID:22577135 GO_REF:0000118 NCBI chrNW_004624885:767,455...770,023
Ensembl chrNW_004624885:762,934...770,129
JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120
JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004624772:10,750,539...10,806,868
Ensembl chrNW_004624772:10,750,539...10,806,300
JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ISO RGD PMID:17141959 RGD:2303044 NCBI chrNW_004624782:449,217...590,306
Ensembl chrNW_004624782:449,288...591,310
JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:26025376) MGI PMID:26025376 NCBI chrNW_004624931:431,835...568,609 JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chrNW_004624730:72,417,069...72,428,194
Ensembl chrNW_004624730:72,417,856...72,428,093
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004624755:25,633,690...25,647,361
Ensembl chrNW_004624755:25,635,165...25,646,932
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (PMID:15234344) MGI PMID:15234344 NCBI chrNW_004624731:32,629,586...32,748,515
Ensembl chrNW_004624731:32,629,477...32,749,081
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chrNW_004624784:14,467,515...14,474,954
Ensembl chrNW_004624784:14,467,533...14,474,954
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chrNW_004624846:2,281,292...2,283,596
Ensembl chrNW_004624846:2,277,961...2,283,571
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chrNW_004624777:8,831,246...8,877,881
Ensembl chrNW_004624777:8,827,851...8,877,873
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004624865:780,163...785,776 JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:12111813) MGI PMID:12111813 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of ISO (PMID:10442636), (PMID:9878702)
(PMID:11297510)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:29106906)
(PMID:21800304)
MGI PMID:21800304 PMID:29106906 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nkx2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19258013) Ensembl
MGI
PMID:19258013 GO_REF:0000107 NCBI chrNW_004624741:21,857,911...21,860,128
Ensembl chrNW_004624741:21,852,205...21,860,040
JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of ISO (PMID:14702088) MGI PMID:14702088 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19258013) RGD
MGI
Ensembl
PMID:19258013 PMID:22944581 GO_REF:0000107 RGD:8552357 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G S100b S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chrNW_004624745:31,645,927...31,652,846
Ensembl chrNW_004624745:31,645,927...31,652,832
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10357934) MGI PMID:10357934 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Sox6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:15590934) MGI PMID:15590934 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO (PMID:29890290) MGI PMID:29890290 NCBI chrNW_004624762:9,457,283...9,570,311
Ensembl chrNW_004624762:9,457,705...9,563,779
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14573516) Ensembl
MGI
PMID:14573516 GO_REF:0000107 NCBI chrNW_004624850:405,001...421,208
Ensembl chrNW_004624850:406,840...421,128
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chrNW_004624913:1,759,460...1,764,242
Ensembl chrNW_004624913:1,759,548...1,764,344
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (PMID:16292311) MGI PMID:16292311 NCBI chrNW_004624859:5,586,489...5,601,225
Ensembl chrNW_004624859:5,586,977...5,601,460
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004624771:3,160,528...3,280,860
Ensembl chrNW_004624771:3,160,224...3,278,787
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chrNW_004624795:395,298...400,781
Ensembl chrNW_004624795:394,436...401,231
JBrowse link
G Gpr37l1 G protein-coupled receptor 37 like 1 acts_upstream_of ISO (PMID:24062445) MGI PMID:24062445 NCBI chrNW_004624807:8,605,488...8,611,760
Ensembl chrNW_004624807:8,605,488...8,611,669
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21319224) Ensembl
MGI
PMID:21319224 GO_REF:0000107 NCBI chrNW_004624862:3,550,498...3,627,061
Ensembl chrNW_004624862:3,550,968...3,627,058
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10375501) MGI PMID:10375501 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chrNW_004624787:3,685,700...3,745,018
Ensembl chrNW_004624787:3,686,088...3,744,895
JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:22573681) MGI PMID:22573681 NCBI chrNW_004624801:10,173,722...10,209,202
Ensembl chrNW_004624801:10,175,994...10,209,192
JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:5,797,897...5,805,055
Ensembl chrNW_004624823:5,797,943...5,808,448
JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004624786:3,121,282...3,319,804
Ensembl chrNW_004624786:3,174,989...3,319,804
JBrowse link
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:20147288 RGD:405855864 NCBI chrNW_004624740:16,275,108...16,280,639
Ensembl chrNW_004624740:16,275,117...16,281,793
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:28,439,855...28,476,551
Ensembl chrNW_004624746:28,436,895...28,476,926
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) UniProt PMID:26299366 NCBI chrNW_004624777:3,342,437...3,710,544
Ensembl chrNW_004624777:3,342,271...3,639,118
JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chrNW_004624734:6,942,786...7,000,453
Ensembl chrNW_004624734:6,942,374...7,001,212
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:17487225) MGI PMID:17487225 NCBI chrNW_004624738:11,094,699...12,010,349
Ensembl chrNW_004624738:11,095,134...11,288,891
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:5,184,423...5,189,691
Ensembl chrNW_004624816:5,184,536...5,187,659
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) UniProt PMID:34942119 NCBI chrNW_004624747:21,473,337...21,501,348
Ensembl chrNW_004624747:21,473,352...21,499,843
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO (PMID:9753321) MGI PMID:9753321 NCBI chrNW_004624750:8,835,521...8,940,957
Ensembl chrNW_004624750:8,837,037...8,938,009
JBrowse link
G Apod apolipoprotein D involved_in ISS
IEA
UniProt
InterPro
GO_REF:0000002 GO_REF:0000024 NCBI chrNW_004624730:62,535,005...62,552,405
Ensembl chrNW_004624730:62,530,673...62,555,129
JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chrNW_004624789:10,223,339...10,252,889
Ensembl chrNW_004624789:10,229,793...10,254,364
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:24022475) UniProt PMID:24022475 NCBI chrNW_004624768:21,166,554...21,319,462
Ensembl chrNW_004624768:21,166,554...21,319,594
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) MGI PMID:20823249 NCBI chrNW_004624798:3,164,145...3,223,810
Ensembl chrNW_004624798:3,165,393...3,225,181
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:12223565) MGI PMID:12223565 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864
JBrowse link
G Atxn1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004624756:9,770,261...10,167,560
Ensembl chrNW_004624756:10,011,250...10,160,469
JBrowse link
G Atxn1l ataxin 1 like involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004624746:14,119,413...14,130,622
Ensembl chrNW_004624746:14,119,440...14,130,429
JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chrNW_004624776:6,823,388...6,954,114
Ensembl chrNW_004624776:6,825,204...6,922,791
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chrNW_004624892:3,260,008...3,270,464
Ensembl chrNW_004624892:3,259,819...3,270,464
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chrNW_004624754:24,559,483...24,571,073
Ensembl chrNW_004624754:24,559,801...24,571,073
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22228099) Ensembl
MGI
PMID:22228099 GO_REF:0000107 NCBI chrNW_004624777:2,105,122...2,151,399
Ensembl chrNW_004624777:2,104,765...2,151,402
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004624747:9,528,968...9,664,055
Ensembl chrNW_004624747:9,528,996...9,662,131
JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO (MGI:5544381|PMID:24074871)
(PMID:24074871)
UniProt PMID:24074871 MGI:5544381 NCBI chrNW_004624885:1,526,625...1,528,235
Ensembl chrNW_004624885:1,527,538...1,528,109
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (PMID:7926765) MGI PMID:7926765 NCBI chrNW_004624796:6,277,201...6,282,830
Ensembl chrNW_004624796:6,274,561...6,282,984
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) HGNC-UCL PMID:14609955 NCBI chrNW_004624870:489,359...626,677
Ensembl chrNW_004624870:487,955...626,683
JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chrNW_004624776:5,497,552...5,573,465
Ensembl chrNW_004624776:5,497,779...5,550,993
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5770105|PMID:27042284) UniProt PMID:27042284 MGI:5770105 NCBI chrNW_004624760:15,902,890...16,071,513
Ensembl chrNW_004624760:15,902,858...16,075,104
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004624817:2,880,775...3,060,399
Ensembl chrNW_004624817:2,880,976...3,042,004
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in ISO (MGI:6739960|PMID:34298015) UniProt PMID:34298015 MGI:6739960 NCBI chrNW_004624844:785,097...1,010,155
Ensembl chrNW_004624844:784,029...1,004,008
JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:29317443) MGI PMID:29317443 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799
JBrowse link
G Cdh2 cadherin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in ISO (MGI:4454588|PMID:20460369) UniProt PMID:20460369 MGI:4454588 NCBI chrNW_004624760:14,736,273...14,930,168
Ensembl chrNW_004624760:14,736,104...14,930,119
JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO (PMID:15248193) MGI PMID:15248193 NCBI chrNW_004624908:1,937,007...1,949,780
Ensembl chrNW_004624908:1,941,393...1,949,760
JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) MGI PMID:31004071 NCBI chrNW_004624831:3,231,854...3,336,184 JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27602517) Ensembl
MGI
PMID:27602517 GO_REF:0000107 NCBI chrNW_004624825:7,411,629...7,475,111
Ensembl chrNW_004624825:7,411,629...7,474,526
JBrowse link
G Cic capicua transcriptional repressor involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004624907:458,447...486,482
Ensembl chrNW_004624907:454,948...486,565
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (MGI:3693257|PMID:17047318) UniProt PMID:17047318 MGI:3693257 NCBI chrNW_004624903:2,596,049...2,601,315 JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in ISO (PMID:10992246) UniProt PMID:10992246 NCBI chrNW_004624751:23,395,284...23,404,798
Ensembl chrNW_004624751:23,396,789...23,404,906
JBrowse link
G Cntn1 contactin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624917:292,404...752,017
Ensembl chrNW_004624917:471,837...750,245
JBrowse link
G Cntn2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Cntn4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chrNW_004624773:12,331,286...13,302,770
Ensembl chrNW_004624773:12,780,223...13,302,873
JBrowse link
G Cntn6 contactin 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:11,059,466...11,417,825
Ensembl chrNW_004624773:11,059,333...11,417,733
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) BHF-UCL PMID:16107487 NCBI chrNW_004624793:2,325,104...2,426,814
Ensembl chrNW_004624793:2,325,128...2,426,817
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:6,296,975...6,318,266
Ensembl chrNW_004624786:6,298,243...6,317,743
JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chrNW_004624761:17,908,703...18,014,539
Ensembl chrNW_004624761:17,945,350...18,014,246
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:5287328|PMID:21778362) UniProt PMID:21778362 MGI:5287328 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chrNW_004624922:1,261,228...1,273,755
Ensembl chrNW_004624922:1,261,228...1,273,758
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12183377) MGI
TreeGrafter
PMID:12183377 GO_REF:0000118 NCBI chrNW_004624732:35,473,740...35,477,482
Ensembl chrNW_004624732:35,472,760...35,477,528
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624776:1,299,691...1,679,888
Ensembl chrNW_004624776:1,301,762...1,676,835
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624803:4,168,556...4,304,642
Ensembl chrNW_004624803:4,168,556...4,299,979
JBrowse link
G Ddit4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chrNW_004624754:6,091,914...6,094,035
Ensembl chrNW_004624754:6,091,809...6,094,525
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:31256877) UniProt PMID:31256877 NCBI chrNW_004624747:24,054,577...24,075,011
Ensembl chrNW_004624747:24,055,707...24,074,919
JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chrNW_004624774:738,717...845,187
Ensembl chrNW_004624774:739,206...845,272
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:3054504|PMID:15314164) UniProt PMID:15314164 MGI:3054504 NCBI chrNW_004624906:2,396,426...2,402,705
Ensembl chrNW_004624906:2,396,435...2,401,379
JBrowse link
G Dmxl2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624731:8,702,288...8,843,807
Ensembl chrNW_004624731:8,702,137...8,842,653
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:14,131,362...14,133,580 JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO (PMID:12051741) UniProt PMID:12051741 NCBI chrNW_004624784:12,853,870...13,183,224
Ensembl chrNW_004624784:12,854,420...13,183,132
JBrowse link
G Eml1 EMAP like 1 involved_in ISO (MGI:5574528|PMID:24859200)
(PMID:24859200)
UniProt PMID:24859200 MGI:5574528 NCBI chrNW_004624734:4,090,077...4,150,706
Ensembl chrNW_004624734:4,089,986...4,236,776
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12091317)
(PMID:12561075)
MGI PMID:12091317 PMID:12561075 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:12091317)
(PMID:12196586), (PMID:12209834), (PMID:12561075)
MGI PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 NCBI chrNW_004624737:29,103,378...29,110,356
Ensembl chrNW_004624737:29,103,279...29,110,344
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:17353897) UniProt PMID:17353897 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321
JBrowse link
G Epha7 EPH receptor A7 involved_in ISO (MGI:3582020|PMID:15902206) UniProt PMID:15902206 MGI:3582020 NCBI chrNW_004624799:560,441...753,509
Ensembl chrNW_004624799:560,432...754,132
JBrowse link
G Epor erythropoietin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11807041) Ensembl
MGI
PMID:11807041 GO_REF:0000107 NCBI chrNW_004624828:3,181,772...3,187,242
Ensembl chrNW_004624828:3,181,957...3,187,231
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:14605369) MGI PMID:14605369 NCBI chrNW_004624763:16,126,582...16,393,476
Ensembl chrNW_004624763:16,126,938...16,392,804
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:12682014) MGI PMID:12682014 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:26306834)
(PMID:23591631)
(PMID:20675713)
MGI PMID:20675713 PMID:23591631 PMID:26306834 NCBI chrNW_004624832:6,849,001...6,858,931
Ensembl chrNW_004624832:6,849,005...6,857,898
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004624758:5,750,804...5,877,797
Ensembl chrNW_004624758:5,792,514...5,877,709
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chrNW_004624734:26,033,790...26,085,027
Ensembl chrNW_004624734:26,033,790...26,085,014
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:4784576), (PMID:5500588)
(PMID:9635428)
MGI PMID:4784576 PMID:5500588 PMID:9635428 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343
JBrowse link
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486
JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chrNW_004624784:14,369,372...14,382,191
Ensembl chrNW_004624784:14,369,166...14,383,902
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625
JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chrNW_004624746:29,776...44,825
Ensembl chrNW_004624746:29,776...44,741
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910
JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624747:10,518,651...10,580,179
Ensembl chrNW_004624747:10,518,671...10,580,179
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:12435361), (PMID:17395647)
(PMID:8026071)
MGI PMID:8026071 PMID:12435361 PMID:17395647 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in ISO (PMID:28851741) UniProt PMID:28851741 NCBI chrNW_004624796:3,299,535...3,806,346
Ensembl chrNW_004624796:3,302,496...3,806,219
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within ISO (PMID:21377456) MGI PMID:21377456 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO (PMID:12930780) MGI PMID:12930780 NCBI chrNW_004624761:15,387,217...15,389,404
Ensembl chrNW_004624761:15,387,674...15,389,229
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624781:8,694,044...8,907,701
Ensembl chrNW_004624781:8,745,780...8,907,701
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:11291863) MGI PMID:11291863 NCBI chrNW_004624822:74,344...102,484
Ensembl chrNW_004624822:74,373...101,828
JBrowse link
G Hmx2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chrNW_004624737:23,862,661...23,871,723
Ensembl chrNW_004624737:23,861,756...23,871,804
JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO (PMID:15363417) MGI PMID:15363417 NCBI chrNW_004624737:23,873,168...23,878,302
Ensembl chrNW_004624737:23,875,936...23,877,765
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chrNW_004624826:1,260,133...1,287,565
Ensembl chrNW_004624826:1,260,223...1,283,741
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chrNW_004624764:6,639,152...6,736,161
Ensembl chrNW_004624764:6,640,087...6,708,130
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333
JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chrNW_004624746:12,997,012...13,417,034 JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) UniProt PMID:33122427 NCBI chrNW_004624778:10,707,363...10,724,822
Ensembl chrNW_004624778:10,705,916...10,739,006
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:22228099)
(PMID:19036983)
MGI PMID:19036983 PMID:22228099 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337
JBrowse link
G Igf1r insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004624768:5,396,027...5,688,435
Ensembl chrNW_004624768:5,396,156...5,681,809
JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chrNW_004624739:18,264,690...19,194,634
Ensembl chrNW_004624739:18,323,816...19,194,466
JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004624793:2,615,092...2,636,835
Ensembl chrNW_004624793:2,614,589...2,636,947
JBrowse link
G Jhy junctional cadherin complex regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23906841) MGI
TreeGrafter
PMID:23906841 GO_REF:0000118 NCBI chrNW_004624880:2,150,517...2,218,212
Ensembl chrNW_004624880:2,150,314...2,216,660
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:1,915,108...1,923,071
Ensembl chrNW_004624860:1,915,344...1,923,062
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chrNW_004624741:29,089,894...29,143,681
Ensembl chrNW_004624741:29,091,119...29,143,589
JBrowse link
G Kdm4b lysine demethylase 4B involved_in ISO (MGI:6101669|PMID:27023172) UniProt PMID:27023172 MGI:6101669 NCBI chrNW_004624828:4,796,306...4,893,093
Ensembl chrNW_004624828:4,796,972...4,864,638
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624807:9,633,009...9,681,228
Ensembl chrNW_004624807:9,633,281...9,677,260
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:29360985)
(PMID:26306834), (PMID:29360985)
MGI PMID:26306834 PMID:29360985 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:14566948), (PMID:15295034) MGI PMID:14566948 PMID:15295034 NCBI chrNW_004624760:10,951,837...10,982,592 JBrowse link
G LOC101712013 core histone macro-H2A.2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:4,227,897...4,276,595
Ensembl chrNW_004624754:4,227,644...4,279,077
JBrowse link
G Maco1 macoilin 1 involved_in ISO (MGI:3052424|PMID:15255972) BHF-UCL PMID:15255972 MGI:3052424 NCBI chrNW_004624764:9,569,419...9,633,589
Ensembl chrNW_004624764:9,568,909...9,633,589
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (MGI:4887328|PMID:17586838) UniProt PMID:17586838 MGI:4887328 NCBI chrNW_004624741:14,998,007...17,256,372
Ensembl chrNW_004624741:14,998,305...17,252,759
JBrowse link
G Map1s microtubule associated protein 1S involved_in ISO (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chrNW_004624908:400,765...408,154
Ensembl chrNW_004624908:400,577...408,129
JBrowse link
G Mast1 microtubule associated serine/threonine kinase 1 involved_in ISO (PMID:30449657)
(MGI:6269299|PMID:30449657)
UniProt PMID:30449657 MGI:6269299 NCBI chrNW_004624901:429,191...463,534
Ensembl chrNW_004624901:432,836...467,161
JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISO (MGI:7285999|PMID:35482892) UniProt PMID:35482892 MGI:7285999 NCBI chrNW_004624746:19,133,871...19,141,587
Ensembl chrNW_004624746:19,134,377...19,141,462
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:10882104) MGI PMID:10882104 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126
JBrowse link
G Meis1 Meis homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:6,894,332...7,031,354
Ensembl chrNW_004624762:6,873,913...7,031,346
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chrNW_004624827:2,589,157...2,724,065
Ensembl chrNW_004624827:2,587,966...2,723,995
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (PMID:26005865), (PMID:26005868)
(MGI:6196220|PMID:30074985)
ARUK-UCL PMID:26005865 PMID:26005868 PMID:30074985 MGI:6196220 NCBI chrNW_004624764:22,422,520...22,435,332
Ensembl chrNW_004624764:22,422,423...22,435,416
JBrowse link
G Mink1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chrNW_004624786:8,711,388...8,764,102
Ensembl chrNW_004624786:8,711,263...8,763,343
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Napa NSF attachment protein alpha acts_upstream_of_or_within ISO (PMID:11706940) MGI PMID:11706940 NCBI chrNW_004624832:6,301,251...6,323,445 JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chrNW_004624842:4,570,758...4,665,517 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
ISO (PMID:14765537)
(PMID:28916769)
UniProt
MGI
PMID:14765537 PMID:28916769 NCBI chrNW_004624759:5,630,522...5,733,928 JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chrNW_004624742:24,054,340...24,881,716
Ensembl chrNW_004624742:24,054,701...24,877,957
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (PMID:23863479) MGI PMID:23863479 NCBI chrNW_004624747:5,923,827...6,011,276
Ensembl chrNW_004624747:5,923,834...6,011,939
JBrowse link
G Nfasc neurofascin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:6,097,507...6,260,880
Ensembl chrNW_004624807:6,103,524...6,226,583
JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:30388402) UniProt PMID:30388402 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:17,899,152...18,078,213
Ensembl chrNW_004624759:17,899,152...17,999,295
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11971878)
(PMID:8557195)
(PMID:12930780)
UniProt
MGI
PMID:8557195 PMID:11971878 PMID:12930780 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997
JBrowse link
G Nnat neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624842:2,122,968...2,125,490 JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:12397106) MGI PMID:12397106 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:14994267) MGI PMID:14994267 NCBI chrNW_004624780:14,098,144...14,119,791
Ensembl chrNW_004624780:14,098,360...14,119,772
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:21,308,457...21,633,627 JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chrNW_004624860:2,416,448...2,479,216
Ensembl chrNW_004624860:2,416,503...2,479,225
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31383820) Ensembl
MGI
PMID:31383820 GO_REF:0000107 NCBI chrNW_004624828:3,207,935...3,218,795
Ensembl chrNW_004624828:3,208,153...3,218,637
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within ISO (PMID:27486780) MGI PMID:27486780 NCBI chrNW_004624795:1,861,985...1,876,766
Ensembl chrNW_004624795:1,861,991...1,876,737
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10409504), (PMID:12196586) Ensembl
MGI
PMID:10409504 PMID:12196586 GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759
JBrowse link
G Pbx3 PBX homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:9,352,759...9,555,211
Ensembl chrNW_004624760:9,352,563...9,553,984
JBrowse link
G Pcdh18 protocadherin 18 involved_in ISO (MGI:2154581|PMID:11716507) UniProt PMID:11716507 MGI:2154581 NCBI chrNW_004624777:17,969,958...17,982,099
Ensembl chrNW_004624777:17,969,214...17,982,153
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) UniProt PMID:17554007 MGI:3712712 NCBI chrNW_004624752:473,451...498,555
Ensembl chrNW_004624752:469,973...498,729
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834) Ensembl
MGI
PMID:26306834 GO_REF:0000107 NCBI chrNW_004624906:2,120,759...2,131,024
Ensembl chrNW_004624906:2,119,684...2,135,656
JBrowse link
G Pomk protein O-mannose kinase acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624992:196,792...222,638
Ensembl chrNW_004624992:196,645...218,123
JBrowse link
G Pou3f4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624852:5,036,585...5,040,160
Ensembl chrNW_004624852:5,037,373...5,040,139
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:22,542,892...22,577,077
Ensembl chrNW_004624764:22,543,857...22,577,121
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:9153393) MGI PMID:9153393 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chrNW_004624753:16,929,503...16,995,255
Ensembl chrNW_004624753:16,935,251...16,995,389
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670
JBrowse link
G Pygo2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17425782) Ensembl
MGI
PMID:17425782 GO_REF:0000107 NCBI chrNW_004624885:2,521,230...2,525,449
Ensembl chrNW_004624885:2,521,368...2,525,449
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO (PMID:24656866) UniProt PMID:24656866 NCBI chrNW_004624730:3,123,877...3,130,787
Ensembl chrNW_004624730:3,120,958...3,130,757
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) BHF-UCL PMID:20512159 NCBI chrNW_004624732:34,450,616...34,593,675
Ensembl chrNW_004624732:34,450,630...34,593,675
JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within ISO (PMID:15789424) MGI PMID:15789424 NCBI chrNW_004624792:4,652,430...4,657,048
Ensembl chrNW_004624792:4,652,493...4,656,826
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (PMID:12223565) MGI PMID:12223565 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chrNW_004624745:800,963...2,121,445
Ensembl chrNW_004624745:804,797...1,390,551
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:38172607) Ensembl
MGI
PMID:38172607 GO_REF:0000107 NCBI chrNW_004624824:2,649,694...2,655,728
Ensembl chrNW_004624824:2,650,116...2,655,716
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904), (PMID:17558409) MGI PMID:17553904 PMID:17558409 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115
JBrowse link
G Rtn1 reticulon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:41,274,072...41,529,134
Ensembl chrNW_004624734:41,274,546...41,530,090
JBrowse link
G Rtn4 reticulon 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chrNW_004624857:4,143,269...4,147,877
Ensembl chrNW_004624857:4,143,270...4,147,877
JBrowse link
G Sct secretin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:21,841,994...21,842,754
Ensembl chrNW_004624766:21,842,014...21,842,683
JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chrNW_004624750:7,412,869...7,477,965 JBrowse link
G Selenop selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chrNW_004624759:12,207,251...12,218,857 JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chrNW_004624871:330,225...402,327 JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in ISO (MGI:6467717|PMID:31197650)
(PMID:31197650)
UniProt PMID:31197650 MGI:6467717 NCBI chrNW_004624782:14,030,425...14,053,679 JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) UniProt PMID:16249884 NCBI chrNW_004624893:2,373,847...2,660,122
Ensembl chrNW_004624893:2,373,815...2,660,199
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12569128) MGI PMID:12569128 NCBI chrNW_004624738:26,379,172...26,391,669
Ensembl chrNW_004624738:26,380,088...26,394,252
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485
JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:32,169,051...32,186,618
Ensembl chrNW_004624743:32,174,922...32,186,697
JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:5,910,899...5,958,855
Ensembl chrNW_004624772:5,910,897...5,958,845
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17035536) MGI PMID:17035536 NCBI chrNW_004624777:18,540,006...18,619,881
Ensembl chrNW_004624777:18,546,799...18,619,947
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
(PMID:22516202)
HGNC-UCL
MGI
PMID:14609955 PMID:22516202 NCBI chrNW_004624797:8,627,048...8,710,540
Ensembl chrNW_004624797:8,626,742...8,710,845
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:1,237,658...1,255,589
Ensembl chrNW_004624907:1,237,451...1,255,586
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO (PMID:32442410) UniProt PMID:32442410 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764
JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004624832:5,246,328...5,254,247
Ensembl chrNW_004624832:5,246,895...5,253,207
JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004624823:6,359,868...6,383,777
Ensembl chrNW_004624823:6,360,242...6,383,035
JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15690082) Ensembl
MGI
PMID:15690082 GO_REF:0000107 NCBI chrNW_004624772:4,540,518...4,589,562
Ensembl chrNW_004624772:4,540,450...4,589,896
JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chrNW_004624892:2,041,763...2,046,440
Ensembl chrNW_004624892:2,042,071...2,046,026
JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624789:13,685,458...13,749,820
Ensembl chrNW_004624789:13,685,089...13,753,046
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959
JBrowse link
G Tmx2 thioredoxin related transmembrane protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624864:3,016,499...3,020,762
Ensembl chrNW_004624864:3,016,499...3,020,755
JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) UniProt PMID:31630790 NCBI chrNW_004624737:13,436,046...13,459,101 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chrNW_004624860:232,838...301,299
Ensembl chrNW_004624860:232,936...299,225
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chrNW_004624794:223,730...243,519
Ensembl chrNW_004624794:223,730...243,199
JBrowse link
G Ufm1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chrNW_004624920:1,318,468...1,477,045
Ensembl chrNW_004624920:1,318,511...1,329,839
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:9,564,500...9,619,899
Ensembl chrNW_004624762:9,564,498...9,619,040
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chrNW_004624730:77,495,705...77,876,547
Ensembl chrNW_004624730:77,495,747...77,875,622
JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within ISO (PMID:10818148)
(PMID:9126743)
(PMID:1401878), (PMID:9550145)
MGI PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 NCBI chrNW_004624757:23,145,200...23,537,812
Ensembl chrNW_004624757:23,151,485...23,537,706
JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chrNW_004624895:3,762,087...3,781,662 JBrowse link
G Utp3 UTP3 small subunit processome component involved_in ISO (MGI:2136064|PMID:11404095) UniProt PMID:11404095 MGI:2136064 NCBI chrNW_004624890:2,022,601...2,024,679
Ensembl chrNW_004624890:2,022,764...2,024,173
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601036)
(PMID:10601035)
MGI PMID:10601035 PMID:10601036 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chrNW_004624763:6,101,943...6,866,457
Ensembl chrNW_004624763:6,102,674...6,864,817
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004624772:4,749,748...4,821,490
Ensembl chrNW_004624772:4,750,931...4,806,717
JBrowse link
G Zic1 Zic family member 1 involved_in ISO (MGI:78770|PMID:7931345)
(PMID:8542595)
UniProt PMID:7931345 PMID:8542595 MGI:78770 NCBI chrNW_004624730:24,440,717...24,444,663
Ensembl chrNW_004624730:24,440,192...24,448,421
JBrowse link
G Znf335 zinc finger protein 335 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:8,624,316...8,646,712
Ensembl chrNW_004624790:8,625,150...8,647,441
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Akt3 AKT serine/threonine kinase 3 acts_upstream_of_or_within ISO (PMID:15713641) MGI PMID:15713641 NCBI chrNW_004624771:15,639,018...15,896,590
Ensembl chrNW_004624771:15,648,638...15,896,590
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chrNW_004624757:55,861...88,703
Ensembl chrNW_004624757:55,811...88,562
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624781:1,502,069...1,553,101
Ensembl chrNW_004624781:1,503,816...1,538,755
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583) Ensembl
MGI
PMID:25100583 GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chrNW_004624749:22,332,750...23,546,165
Ensembl chrNW_004624749:22,333,710...23,412,593
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:25100583)
(PMID:23178126)
MGI PMID:23178126 PMID:25100583 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998
JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chrNW_004624753:16,566,864...16,811,438 JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004624731:4,577,663...4,671,086
Ensembl chrNW_004624731:4,611,963...4,671,765
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chrNW_004624885:2,315,371...2,321,327
Ensembl chrNW_004624885:2,315,142...2,321,327
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004624741:11,323,935...11,447,669
Ensembl chrNW_004624741:11,425,368...11,435,706
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004624745:31,402,791...31,516,522
Ensembl chrNW_004624745:31,403,014...31,515,751
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004624771:17,183,538...17,205,460
Ensembl chrNW_004624771:17,183,447...17,224,188
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325
JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (PMID:18165320) MGI PMID:18165320 NCBI chrNW_004624732:3,541,525...3,849,805
Ensembl chrNW_004624732:3,540,954...3,849,863
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:2,673,285...2,711,432
Ensembl chrNW_004624786:2,672,552...2,710,914
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chrNW_004624759:19,135,629...19,298,966 JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:21,291,728...21,307,550
Ensembl chrNW_004624767:21,291,728...21,307,728
JBrowse link
G Znf335 zinc finger protein 335 acts_upstream_of_or_within ISO (PMID:23178126) MGI PMID:23178126 NCBI chrNW_004624790:8,624,316...8,646,712
Ensembl chrNW_004624790:8,625,150...8,647,441
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO (PMID:7903221) MGI PMID:7903221 NCBI chrNW_004624791:953,009...959,656
Ensembl chrNW_004624791:955,161...959,791
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO (PMID:9367425) MGI PMID:9367425 NCBI chrNW_004624739:3,501,671...3,504,939
Ensembl chrNW_004624739:3,501,817...3,504,750
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO (PMID:7925021) MGI PMID:7925021 NCBI chrNW_004624919:1,337,269...1,340,607
Ensembl chrNW_004624919:1,339,228...1,340,208
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:15548218) MGI PMID:15548218 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO (PMID:11872605) UniProt PMID:11872605 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854
JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chrNW_004624961:147,685...155,614
Ensembl chrNW_004624961:143,358...154,003
JBrowse link
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Phox2b paired like homeobox 2B acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004624761:25,234,048...25,238,725
Ensembl chrNW_004624761:25,234,372...25,237,102
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:12,182,728...12,185,228
Ensembl chrNW_004624781:12,183,444...12,185,185
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chrNW_004624772:11,609,825...11,614,937
Ensembl chrNW_004624772:11,611,342...11,613,835
JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272) MGI PMID:8955272 NCBI chrNW_004624751:21,812,567...21,817,837
Ensembl chrNW_004624751:21,812,850...21,814,747
JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chrNW_004624749:2,737,251...2,747,540
Ensembl chrNW_004624749:2,737,251...2,745,979
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) MGI PMID:25099998 NCBI chrNW_004624782:75,141...184,590
Ensembl chrNW_004624782:75,066...184,590
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chrNW_004624760:13,472,500...13,658,070
Ensembl chrNW_004624760:13,472,672...13,657,930
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10970885) MGI PMID:10970885 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725) MGI PMID:15677725 NCBI chrNW_004624897:1,279,138...1,303,210 JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004624775:17,820,590...18,165,640
Ensembl chrNW_004624775:17,831,272...18,165,668
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004624784:7,093,457...7,178,448
Ensembl chrNW_004624784:7,094,736...7,175,072
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:10729342) MGI PMID:10729342 NCBI chrNW_004624737:29,103,378...29,110,356
Ensembl chrNW_004624737:29,103,279...29,110,344
JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chrNW_004624798:8,426,819...8,430,949
Ensembl chrNW_004624798:8,426,825...8,430,939
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:16613831) MGI PMID:16613831 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
G Lhx5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10325223) Ensembl
MGI
PMID:10325223 GO_REF:0000107 NCBI chrNW_004624747:19,088,372...19,097,406
Ensembl chrNW_004624747:19,088,311...19,097,080
JBrowse link
G Ncor2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chrNW_004624747:23,777,645...23,887,804
Ensembl chrNW_004624747:23,777,325...23,865,804
JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chrNW_004624772:11,009,765...11,070,050
Ensembl chrNW_004624772:11,010,845...11,070,017
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chrNW_004624817:5,523,648...5,568,997
Ensembl chrNW_004624817:5,523,665...5,568,994
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chrNW_004624738:26,379,172...26,391,669
Ensembl chrNW_004624738:26,380,088...26,394,252
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chrNW_004624832:6,413,169...6,423,394
Ensembl chrNW_004624832:6,414,587...6,423,394
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chrNW_004624758:23,147,512...23,240,711
Ensembl chrNW_004624758:23,147,452...23,230,879
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chrNW_004624763:19,861,837...19,888,626 JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (MGI:4461115|PMID:20018874)
(PMID:20018874)
CACAO
ParkinsonsUK-UCL
PMID:20018874 MGI:4461115 NCBI chrNW_004624827:2,045,733...2,088,284
Ensembl chrNW_004624827:2,045,595...2,089,442
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chrNW_004624862:2,053,637...3,159,712
Ensembl chrNW_004624862:2,892,851...3,144,194
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624833:6,947,611...7,144,688
Ensembl chrNW_004624833:6,947,273...7,089,924
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO (PMID:16357211) MGI PMID:16357211 NCBI chrNW_004624747:21,259,515...21,300,180
Ensembl chrNW_004624747:21,265,197...21,300,149
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:14,952,313...14,975,678
Ensembl chrNW_004624762:14,952,002...14,975,900
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:5576986|PMID:24487234) ARUK-UCL PMID:24487234 MGI:5576986 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995 NCBI chrNW_004624760:880,216...898,753
Ensembl chrNW_004624760:880,148...898,751
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chrNW_004624767:1,761,983...1,874,534
Ensembl chrNW_004624767:1,761,733...1,874,534
JBrowse link
G Cntn1 contactin 1 involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chrNW_004624917:292,404...752,017
Ensembl chrNW_004624917:471,837...750,245
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (PMID:17952069) MGI PMID:17952069 NCBI chrNW_004624907:2,249,323...2,263,999
Ensembl chrNW_004624907:2,250,133...2,263,947
JBrowse link
G Mag myelin associated glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:8,237,005...8,251,933
Ensembl chrNW_004624794:8,236,223...8,258,361
JBrowse link
G Mios meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624813:5,179,650...5,219,683
Ensembl chrNW_004624813:5,179,555...5,217,688
JBrowse link
G Mobp myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chrNW_004624730:78,759,681...78,794,632
Ensembl chrNW_004624730:78,762,075...78,773,422
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (MGI:5437806|PMID:22915103)
(PMID:26188006)
UniProt PMID:22915103 PMID:26188006 MGI:5437806 NCBI chrNW_004624863:1,643,173...2,374,330
Ensembl chrNW_004624863:1,643,076...2,149,630
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in ISO (PMID:21543606) Alzheimers_University_of_Toronto PMID:21543606 NCBI chrNW_004624758:22,431,331...22,444,185
Ensembl chrNW_004624758:22,426,918...22,444,357
JBrowse link
G Fa2h fatty acid 2-hydroxylase acts_upstream_of_or_within ISO (PMID:18815260)
(PMID:21491498)
MGI PMID:18815260 PMID:21491498 NCBI chrNW_004624746:12,125,709...12,186,254
Ensembl chrNW_004624746:12,125,506...12,186,671
JBrowse link
G Myrf myelin regulatory factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624926:615,991...636,167
Ensembl chrNW_004624926:617,303...636,080
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspa aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chrNW_004624786:6,168,785...6,202,223
Ensembl chrNW_004624786:6,168,721...6,188,312
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004624790:5,770,586...5,792,036
Ensembl chrNW_004624790:5,766,903...5,789,140
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004624770:1,119,202...1,239,127
Ensembl chrNW_004624770:1,160,120...1,240,016
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chrNW_004624807:6,052,591...6,080,421
Ensembl chrNW_004624807:6,056,339...6,073,588
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO (PMID:28374019) UniProt PMID:28374019 NCBI chrNW_004624795:1,470,234...1,482,066
Ensembl chrNW_004624795:1,470,760...1,481,973
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004624755:25,633,690...25,647,361
Ensembl chrNW_004624755:25,635,165...25,646,932
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:17006542) MGI PMID:17006542 NCBI chrNW_004624818:7,516,279...7,517,654
Ensembl chrNW_004624818:7,516,189...7,518,734
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chrNW_004624756:6,816,364...6,819,144
Ensembl chrNW_004624756:6,814,842...6,819,578
JBrowse link
G Kcnj10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chrNW_004624794:1,180,822...1,211,781
Ensembl chrNW_004624794:1,180,834...1,212,456
JBrowse link
G Mag myelin associated glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:8,237,005...8,251,933
Ensembl chrNW_004624794:8,236,223...8,258,361
JBrowse link
G Mal mal, T cell differentiation protein acts_upstream_of ISO (PMID:15337780) MGI PMID:15337780 NCBI chrNW_004624749:1,854,177...1,877,054
Ensembl chrNW_004624749:1,853,838...1,879,590
JBrowse link
G Myrf myelin regulatory factor involved_in ISO (MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:19596243 PMID:24204311 PMID:27532821 MGI:3850982 MGI:5544144 MGI:5805298 NCBI chrNW_004624926:615,991...636,167
Ensembl chrNW_004624926:617,303...636,080
JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO (PMID:27008863) MGI PMID:27008863 NCBI chrNW_004624794:908,227...923,474
Ensembl chrNW_004624794:905,857...924,003
JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO (PMID:15601927) MGI PMID:15601927 NCBI chrNW_004624737:14,045,402...14,047,005
Ensembl chrNW_004624737:14,045,640...14,048,786
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:1694232) MGI
TreeGrafter
PMID:1694232 GO_REF:0000118 NCBI chrNW_004624954:135,065...150,911
Ensembl chrNW_004624954:133,105...150,953
JBrowse link
G Sox10 SRY-box transcription factor 10 involved_in ISO (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chrNW_004624752:9,965,015...9,976,244
Ensembl chrNW_004624752:9,965,756...9,973,777
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chrNW_004624730:77,495,705...77,876,547
Ensembl chrNW_004624730:77,495,747...77,875,622
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chrNW_004624832:6,650,383...6,773,828
Ensembl chrNW_004624832:6,650,383...6,719,786
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004624924:1,069,343...1,343,639
Ensembl chrNW_004624924:1,068,947...1,240,671
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004624790:5,770,586...5,792,036
Ensembl chrNW_004624790:5,766,903...5,789,140
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004624770:1,119,202...1,239,127
Ensembl chrNW_004624770:1,160,120...1,240,016
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (PMID:15208636) MGI PMID:15208636 NCBI chrNW_004624786:10,981,963...11,039,504
Ensembl chrNW_004624786:11,000,615...11,034,689
JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004624735:15,356,911...15,713,219
Ensembl chrNW_004624735:15,461,178...15,714,071
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chrNW_004624859:3,061,185...4,420,220
Ensembl chrNW_004624859:3,061,342...4,418,967
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chrNW_004624809:9,119,412...9,321,226
Ensembl chrNW_004624809:9,119,951...9,339,604
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:15169849)
(PMID:16469766)
MGI PMID:15169849 PMID:16469766 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chrNW_004624760:15,902,890...16,071,513
Ensembl chrNW_004624760:15,902,858...16,075,104
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:20020054) MGI PMID:20020054 NCBI chrNW_004624807:7,541,335...7,545,412
Ensembl chrNW_004624807:7,540,602...7,545,521
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:16680166) MGI PMID:16680166 NCBI chrNW_004624820:3,542,767...3,547,180
Ensembl chrNW_004624820:3,543,687...3,545,147
JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004624761:19,595,802...20,019,368
Ensembl chrNW_004624761:19,600,946...20,017,278
JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chrNW_004624961:147,685...155,614
Ensembl chrNW_004624961:143,358...154,003
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:5,045,566...5,056,419
Ensembl chrNW_004624868:5,045,594...5,056,416
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:9886073) MGI PMID:9886073 NCBI chrNW_004624797:14,148,580...14,184,471 JBrowse link
G Lep leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10592285) Ensembl
MGI
PMID:10592285 GO_REF:0000107 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chrNW_004624894:648,357...791,168
Ensembl chrNW_004624894:648,785...791,168
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chrNW_004624760:8,701,204...8,772,147
Ensembl chrNW_004624760:8,698,139...8,772,147
JBrowse link
G Map2 microtubule associated protein 2 involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004624765:6,476,544...6,758,959
Ensembl chrNW_004624765:6,476,346...6,546,116
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO (MGI:5789071|PMID:27223325) UniProt PMID:27223325 MGI:5789071 NCBI chrNW_004624832:7,258,897...7,283,680
Ensembl chrNW_004624832:7,258,842...7,283,319
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004624739:6,277,704...6,285,454
Ensembl chrNW_004624739:6,277,612...6,285,397
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:1343962|PMID:8402890) UniProt PMID:8402890 MGI:1343962 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:33,659,625...33,758,680
Ensembl chrNW_004624734:33,658,975...33,721,548
JBrowse link
G Taok1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:1,920,037...2,054,795
Ensembl chrNW_004624786:1,968,991...2,045,948
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (PMID:31537781) MGI PMID:31537781 NCBI chrNW_004624784:13,913,218...13,931,581
Ensembl chrNW_004624784:13,913,225...13,931,581
JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chrNW_004624734:4,560,362...4,649,219
Ensembl chrNW_004624734:4,560,699...4,647,858
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:15469980) MGI PMID:15469980 NCBI chrNW_004624841:218,642...304,744
Ensembl chrNW_004624841:219,133...265,397
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO (PMID:15469980) MGI PMID:15469980 NCBI chrNW_004624757:22,697,639...23,142,209
Ensembl chrNW_004624757:22,955,666...23,142,499
JBrowse link
G Brinp2 BMP/retinoic acid inducible neural specific 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624771:4,926,187...5,021,454
Ensembl chrNW_004624771:4,924,750...4,972,097
JBrowse link
G Brinp3 BMP/retinoic acid inducible neural specific 3 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chrNW_004624814:3,092,139...3,502,625
Ensembl chrNW_004624814:3,094,109...3,502,857
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chrNW_004624739:3,509,020...3,511,890
Ensembl chrNW_004624739:3,508,838...3,511,864
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302)
(PMID:17670789)
Ensembl
MGI
PMID:15148302 PMID:17670789 GO_REF:0000107 NCBI chrNW_004624826:3,541,291...3,689,039
Ensembl chrNW_004624826:3,543,191...3,689,062
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chrNW_004624827:2,589,157...2,724,065
Ensembl chrNW_004624827:2,587,966...2,723,995
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chrNW_004624800:1,426,773...1,431,510
Ensembl chrNW_004624800:1,426,998...1,431,631
JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:19592574) MGI PMID:19592574 NCBI chrNW_004624900:1,618,019...1,623,975
Ensembl chrNW_004624900:1,618,563...1,623,793
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11113533) Ensembl
TreeGrafter
MGI
PMID:11113533 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624732:9,572,160...9,589,624
Ensembl chrNW_004624732:9,581,779...9,589,942
JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8876243)
(PMID:8955272)
MGI PMID:8876243 PMID:8955272 NCBI chrNW_004624751:21,812,567...21,817,837
Ensembl chrNW_004624751:21,812,850...21,814,747
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571630) MGI PMID:16571630 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chrNW_004624752:14,986,146...15,382,687
Ensembl chrNW_004624752:14,985,942...15,378,465
JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chrNW_004624733:9,556,024...10,080,703
Ensembl chrNW_004624733:9,556,763...10,080,703
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (PMID:16292311) MGI PMID:16292311 NCBI chrNW_004624859:5,586,489...5,601,225
Ensembl chrNW_004624859:5,586,977...5,601,460
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chrNW_004624860:232,838...301,299
Ensembl chrNW_004624860:232,936...299,225
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624744:27,008,292...27,009,602
Ensembl chrNW_004624744:27,008,471...27,009,583
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:11344259), (PMID:14687550)
(PMID:15608630)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624776:1,299,691...1,679,888
Ensembl chrNW_004624776:1,301,762...1,676,835
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004624803:4,168,556...4,304,642
Ensembl chrNW_004624803:4,168,556...4,299,979
JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004624730:11,120,018...11,564,972
Ensembl chrNW_004624730:11,119,909...11,565,293
JBrowse link
G Ephb2 EPH receptor B2 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482
JBrowse link
G Ephb3 EPH receptor B3 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3759703|PMID:17901218)
(PMID:18031680)
UniProt
MGI
PMID:17901218 PMID:18031680 MGI:3759703 NCBI chrNW_004624751:23,048,373...23,355,510
Ensembl chrNW_004624751:23,048,404...23,355,510
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10585298) Ensembl
MGI
PMID:10585298 GO_REF:0000107 NCBI chrNW_004624732:9,572,160...9,589,624
Ensembl chrNW_004624732:9,581,779...9,589,942
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004624757:10,801,701...10,809,887
Ensembl chrNW_004624757:10,802,406...10,805,704
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17197442) MGI
TreeGrafter
PMID:17197442 GO_REF:0000118 NCBI chrNW_004624925:454,092...529,122
Ensembl chrNW_004624925:454,134...529,108
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chrNW_004624793:11,162,835...11,167,497
Ensembl chrNW_004624793:11,163,916...11,167,457
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO (PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
UniProt PMID:24766809 PMID:24766810 MGI:5568133 NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051
JBrowse link
G Dixdc1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chrNW_004624784:7,093,457...7,178,448
Ensembl chrNW_004624784:7,094,736...7,175,072
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:20798045) MGI PMID:20798045 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004624758:5,750,804...5,877,797
Ensembl chrNW_004624758:5,792,514...5,877,709
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chrNW_004624766:11,056,877...11,417,291
Ensembl chrNW_004624766:11,170,921...11,414,050
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISO (MGI:3621523|PMID:16504944) UniProt PMID:16504944 MGI:3621523 NCBI chrNW_004624795:3,453,525...3,457,618
Ensembl chrNW_004624795:3,453,591...3,457,625
JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chrNW_004624740:7,481,719...7,549,809
Ensembl chrNW_004624740:7,482,314...7,549,417
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10407039) Ensembl
MGI
PMID:10407039 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chrNW_004624747:569,127...588,479
Ensembl chrNW_004624747:581,832...588,333
JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452
JBrowse link
G LOC101715424 tubulin alpha-1B chain-like involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004624745:31,402,791...31,516,522
Ensembl chrNW_004624745:31,403,014...31,515,751
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Trnp1 TMF1 regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chrNW_004624764:10,957,840...10,964,647
Ensembl chrNW_004624764:10,958,425...10,964,647
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chrNW_004624767:2,171,096...2,173,436
Ensembl chrNW_004624767:2,171,096...2,173,512
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004624804:9,841,401...10,002,592
Ensembl chrNW_004624804:9,848,512...10,002,693
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) Ensembl
TreeGrafter
MGI
PMID:20153830 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:21,718,023...21,720,907
Ensembl chrNW_004624766:21,718,169...21,720,907
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:17409116) MGI PMID:17409116 NCBI chrNW_004624823:1,261,458...1,326,261
Ensembl chrNW_004624823:1,261,406...1,326,917
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004624807:10,093,518...10,144,484
Ensembl chrNW_004624807:10,092,934...10,143,399
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) MGI PMID:17984326 NCBI chrNW_004624737:13,516,881...13,577,795
Ensembl chrNW_004624737:13,518,818...13,577,762
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004624765:16,182,691...16,218,634
Ensembl chrNW_004624765:16,181,809...16,218,720
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:23042739)
MGI PMID:21800304 PMID:23042739 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004624891:1,907,233...2,429,714
Ensembl chrNW_004624891:1,908,044...2,425,144
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chrNW_004624747:27,680,994...27,697,342
Ensembl chrNW_004624747:27,681,033...27,695,966
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) MGI PMID:9405095 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in ISO (MGI:5689090|PMID:22095825) UniProt PMID:22095825 MGI:5689090 NCBI chrNW_004624832:4,400,586...4,405,203
Ensembl chrNW_004624832:4,396,604...4,405,185
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004624777:3,268,674...3,321,424
Ensembl chrNW_004624777:3,268,953...3,321,145
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chrNW_004624847:1,878,946...1,881,794
Ensembl chrNW_004624847:1,879,007...1,881,669
JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300
JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO (PMID:20498273) MGI PMID:20498273 NCBI chrNW_004624745:24,850,386...24,859,669
Ensembl chrNW_004624745:24,850,366...24,859,663
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chrNW_004624818:3,255,835...3,648,634
Ensembl chrNW_004624818:3,388,149...3,648,634
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:2683830|PMID:14687547) UniProt PMID:14687547 MGI:2683830 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
ISO (MGI:2683830|PMID:14687547)
(PMID:10027293)
(MGI:5689090|PMID:22095825)
UniProt
MGI
PMID:10027293 PMID:14687547 PMID:22095825 MGI:2683830 MGI:5689090 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Znf423 zinc finger protein 423 acts_upstream_of_or_within ISO (PMID:27727273) MGI PMID:27727273 NCBI chrNW_004624757:6,742,289...7,060,907
Ensembl chrNW_004624757:6,742,132...7,061,058
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO (PMID:18327254) MGI PMID:18327254 NCBI chrNW_004624807:3,643,283...3,829,817
Ensembl chrNW_004624807:3,643,255...3,834,128
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004624804:9,841,401...10,002,592
Ensembl chrNW_004624804:9,848,512...10,002,693
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004624850:6,135,214...6,142,975
Ensembl chrNW_004624850:6,134,908...6,143,404
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624791:1,330,869...1,355,248
Ensembl chrNW_004624791:1,330,794...1,470,973
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004624945:734,532...767,184
Ensembl chrNW_004624945:734,532...767,168
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004624737:27,736,167...27,738,664
Ensembl chrNW_004624737:27,737,735...27,738,568
JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004624794:12,677,695...12,724,595
Ensembl chrNW_004624794:12,686,543...12,719,695
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048)
(PMID:30420556)
(PMID:10630211)
UniProt
MGI
PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 MGI:2159417 MGI:3614720 MGI:4849873 NCBI chrNW_004624809:9,119,412...9,321,226
Ensembl chrNW_004624809:9,119,951...9,339,604
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452
JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chrNW_004624747:20,603,319...20,728,346
Ensembl chrNW_004624747:20,590,906...20,727,962
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7834360)
(PMID:1306163)
(PMID:10630211)
MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) Ensembl
TreeGrafter
MGI
PMID:20153830 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:21,718,023...21,720,907
Ensembl chrNW_004624766:21,718,169...21,720,907
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (PMID:20041218) MGI PMID:20041218 NCBI chrNW_004624781:8,694,044...8,907,701
Ensembl chrNW_004624781:8,745,780...8,907,701
JBrowse link
G Ldb1 LIM domain binding 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624831:1,573,058...1,584,861
Ensembl chrNW_004624831:1,571,942...1,584,775
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033
JBrowse link
G Lhx5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chrNW_004624747:19,088,372...19,097,406
Ensembl chrNW_004624747:19,088,311...19,097,080
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chrNW_004624754:5,725,697...5,753,575
Ensembl chrNW_004624754:5,726,681...5,753,575
JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within ISO (PMID:8996814) MGI PMID:8996814 NCBI chrNW_004624781:11,014,185...11,688,558
Ensembl chrNW_004624781:11,014,286...11,679,678
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600)
(PMID:24491816)
MGI PMID:21937600 PMID:24491816 NCBI chrNW_004624778:10,757,829...10,807,277
Ensembl chrNW_004624778:10,758,013...10,809,789
JBrowse link
G Slc25a46 solute carrier family 25 member 46 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28934388) Ensembl
MGI
PMID:28934388 GO_REF:0000107 NCBI chrNW_004624743:28,584,209...28,613,397 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chrNW_004624787:3,685,700...3,745,018
Ensembl chrNW_004624787:3,686,088...3,744,895
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30420556) Ensembl
MGI
PMID:30420556 GO_REF:0000107 NCBI chrNW_004624752:5,883,039...5,901,333
Ensembl chrNW_004624752:5,883,042...5,903,687
JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16906134) Ensembl
MGI
PMID:16906134 GO_REF:0000107 NCBI chrNW_004624746:12,540,969...12,566,989
Ensembl chrNW_004624746:12,540,633...12,567,376
JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chrNW_004624809:9,119,412...9,321,226
Ensembl chrNW_004624809:9,119,951...9,339,604
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205)
(PMID:20577052)
MGI PMID:16625205 PMID:20577052 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chrNW_004624892:3,260,008...3,270,464
Ensembl chrNW_004624892:3,259,819...3,270,464
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004624816:2,386,995...2,418,312
Ensembl chrNW_004624816:2,386,647...2,420,274
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chrNW_004624760:9,986,529...9,991,261
Ensembl chrNW_004624760:9,986,656...9,995,252
JBrowse link
G Klhl1 kelch like family member 1 acts_upstream_of_or_within ISO (PMID:17005861) MGI PMID:17005861 NCBI chrNW_004624748:30,948,092...31,387,128
Ensembl chrNW_004624748:30,948,029...31,387,128
JBrowse link
G LOC101712532 cytochrome b-c1 complex subunit 8 involved_in ISO (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chrNW_004624733:39,233,359...39,235,008
Ensembl chrNW_004624733:39,233,359...39,234,945
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004624786:11,039,436...11,190,935
Ensembl chrNW_004624786:11,040,951...11,185,627
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within