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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRA2 adhesion G protein-coupled receptor A2 involved_in ISO (MGI:4839817|PMID:21071672) UniProt PMID:21071672 MGI:4839817 NCBI chr 8:35,834,840...35,879,851
Ensembl chr 8:35,834,876...35,878,233
JBrowse link
G ALDH3A2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,213,284...18,241,261
Ensembl chr16:18,213,487...18,239,271
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:47,712,785...47,746,198
Ensembl chr17:47,709,888...47,745,830
JBrowse link
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:128,064,457...128,106,813
Ensembl chr11:128,060,889...128,106,604
JBrowse link
G APLP1 amyloid beta precursor like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:30,780,112...30,791,582
Ensembl chr 6:30,780,085...30,791,636
JBrowse link
G APP amyloid beta precursor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306
JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:2,790,059...2,990,760
Ensembl chr26:2,794,372...2,990,814
JBrowse link
G B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO (PMID:11384981) UniProt PMID:11384981 NCBI chr15:6,131,905...6,151,882
Ensembl chr15:6,134,356...6,135,489
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:9556299) BHF-UCL PMID:9556299 NCBI chr 8:56,654,939...56,782,803
Ensembl chr 8:56,657,826...56,785,804
JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chr15:5,030,618...5,040,399
Ensembl chr15:5,030,457...5,039,991
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11823447) Ensembl
MGI
PMID:11823447 GO_REF:0000107 NCBI chr13:34,009,527...34,011,924
Ensembl chr13:34,010,228...34,011,046
JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,196,213...44,227,718
Ensembl chr11:44,196,094...44,227,468
JBrowse link
G COX7B cytochrome c oxidase subunit 7B, mitochondrial involved_in ISO (PMID:23122588) UniProt PMID:23122588 NCBI chr  X:66,832,180...66,837,957 JBrowse link
G DAZAP1 DAZ associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:1,181,416...1,208,784
Ensembl chr 6:1,181,408...1,208,838
JBrowse link
G DHX30 DExH-box helicase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,191,527...9,239,445
Ensembl chr22:9,206,175...9,239,372
JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:86,294,309...86,315,688
Ensembl chr20:86,295,354...86,300,816
JBrowse link
G DNER delta/notch like EGF repeat containing involved_in ISO (PMID:11950833) UniProt PMID:11950833 NCBI chr10:115,357,097...115,739,992
Ensembl chr10:115,357,084...115,739,777
JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:52,217,390...52,224,045
Ensembl chr24:52,217,365...52,227,930
JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,190,992...26,291,085
Ensembl chr 8:26,190,944...26,292,890
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:34,232,425...34,250,807
Ensembl chr14:34,232,819...34,249,253
JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:110,347,043...110,353,647
Ensembl chr 9:110,347,379...110,353,643
JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20675713) Ensembl
MGI
PMID:20675713 GO_REF:0000107 NCBI chr 6:40,100,399...40,128,340
Ensembl chr 6:40,126,321...40,127,808
JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chr  X:122,635,383...122,674,298
Ensembl chr  X:122,635,439...122,674,355
JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within ISO (PMID:17005728) MGI PMID:17005728 NCBI chr27:3,253,789...3,323,102
Ensembl chr27:3,254,735...3,321,128
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:18346921) MGI PMID:18346921 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628)
(PMID:12435629)
Ensembl
MGI
PMID:12435628 PMID:12435629 GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11787818) Ensembl
MGI
PMID:11787818 GO_REF:0000107 NCBI chr20:108,338,891...108,375,351
Ensembl chr20:108,330,121...108,361,887
JBrowse link
G GSN gelsolin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:18,253,079...18,317,285
Ensembl chr12:18,253,324...18,285,938
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11731457), (PMID:12724834) Ensembl
MGI
PMID:11731457 PMID:12724834 GO_REF:0000107 NCBI chr 7:14,436,848...14,446,197
Ensembl chr 7:14,439,371...14,440,944
JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 4:77,753,674...77,782,452 JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:7,419,345...7,456,484
Ensembl chr29:7,419,329...7,439,666
JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:17,721,746...17,728,920
Ensembl chr 6:17,724,018...17,727,715
JBrowse link
G HELT helt bHLH transcription factor acts_upstream_of_or_within ISO (PMID:16968817) MGI PMID:16968817 NCBI chr 7:130,982,298...130,988,696
Ensembl chr 7:130,985,304...130,987,148
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein involved_in ISO (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chr20:109,120,403...109,122,269
Ensembl chr20:109,120,691...109,123,210
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:9889105)
(PMID:9875844)
(PMID:10911993)
MGI PMID:9875844 PMID:9889105 PMID:10911993 NCBI chr 3:86,576,200...86,587,097
Ensembl chr 3:86,577,304...86,580,039
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302) Ensembl
MGI
PMID:15148302 GO_REF:0000107 NCBI chr25:63,533,442...63,688,124
Ensembl chr25:63,640,244...63,686,106
JBrowse link
G LOC103216270 cytochrome P450 26A1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chr 9:86,310,142...86,328,622
Ensembl chr 9:86,325,401...86,328,775
JBrowse link
G LOC103216393 paired box protein Pax-2 involved_in ISO (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G LOC103219957 macrophage-capping protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:21,742,163...21,761,462
Ensembl chr14:21,746,044...21,761,322
JBrowse link
G LOC119618102 cytochrome P450 26C1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17067568) Ensembl
MGI
PMID:17067568 GO_REF:0000107 Ensembl chr 9:86,311,950...86,319,834 JBrowse link
G LOC119620905 MARCKS-related protein-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G LOC119627284 macrophage-capping protein-like involved_in IEA TreeGrafter GO_REF:0000118
G MARCKSL1 MARCKS like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:100,527,281...100,529,577 JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:125,132,517...125,138,520
Ensembl chr21:125,133,194...125,138,217
JBrowse link
G MSI1 musashi RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr11:115,701,408...115,719,170 JBrowse link
G MSI2 musashi RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:35,711,443...36,141,949
Ensembl chr16:35,719,075...36,141,925
JBrowse link
G NDN necdin, MAGE family member acts_upstream_of_or_within ISO (PMID:15649943) MGI PMID:15649943 NCBI chr26:57,939,212...57,940,868
Ensembl chr26:57,939,330...57,940,295
JBrowse link
G NGFR nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11978834) Ensembl
MGI
PMID:11978834 GO_REF:0000107 NCBI chr16:69,894,000...69,914,209
Ensembl chr16:69,894,139...69,912,189
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10688202) Ensembl
MGI
PMID:10688202 GO_REF:0000107 NCBI chr16:36,816,783...36,818,693
Ensembl chr16:36,817,476...36,818,174
JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:77,065,496...77,370,774
Ensembl chr21:77,065,211...77,270,797
JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11731459)
(PMID:12652306)
MGI PMID:11731459 PMID:12652306 NCBI chr24:33,975,043...33,984,816 JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,236,074...16,299,650
Ensembl chr14:16,233,378...16,297,365
JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within ISO (MGI:1861161|PMID:10854042) UniProt PMID:10854042 MGI:1861161 NCBI chr 6:3,768,100...3,797,377 JBrowse link
G PTEN phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:12091320) MGI PMID:12091320 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146
JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11900467) InterPro
MGI
Ensembl
PMID:11900467 GO_REF:0000002 GO_REF:0000107 NCBI chr21:72,440,988...72,951,173
Ensembl chr21:72,440,160...72,950,747
JBrowse link
G SEMA6B semaphorin 6B involved_in ISO (PMID:32169168) UniProt PMID:32169168 NCBI chr 6:4,276,548...4,304,738 JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
MGI
UniProt
PMID:12435628 GO_REF:0000107 GO_REF:0000117 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G SLC2A1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (PMID:10227690), (PMID:1714544) ARUK-UCL PMID:1714544 PMID:10227690 NCBI chr20:89,974,567...90,007,977
Ensembl chr20:90,002,030...90,008,033
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
TreeGrafter
MGI
PMID:12435628 GO_REF:0000107 GO_REF:0000118 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709
JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 1:48,871,942...48,953,225 JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:34211179)
(MGI:6742151|PMID:34211179)
UniProt PMID:34211179 MGI:6742151 NCBI chr14:52,266,197...52,487,111
Ensembl chr14:52,262,416...52,487,112
JBrowse link
G STK3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chr 8:93,374,528...93,698,143
Ensembl chr 8:93,374,517...93,697,758
JBrowse link
G STK4 serine/threonine kinase 4 acts_upstream_of_or_within ISO (PMID:19786569) MGI PMID:19786569 NCBI chr 2:18,737,484...18,844,610
Ensembl chr 2:18,742,162...18,844,647
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within ISO (PMID:19624305) MGI PMID:19624305 NCBI chr20:89,360,859...89,422,554 JBrowse link
G THOC6 THO complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:2,767,338...2,771,040
Ensembl chr 5:2,767,634...2,771,812
JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chr 9:94,147,410...94,155,388
Ensembl chr 9:94,149,126...94,154,520
JBrowse link
G TLX3 T cell leukemia homeobox 3 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chr23:73,486,002...73,488,935
Ensembl chr23:73,486,154...73,488,396
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16199867) Ensembl
MGI
PMID:16199867 GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chr25:5,774,037...5,841,620
Ensembl chr25:5,774,063...5,841,709
JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10601035)
(PMID:10601036)
MGI
TreeGrafter
PMID:10601035 PMID:10601036 GO_REF:0000118 NCBI chr 9:109,925,282...109,935,003
Ensembl chr 9:109,930,708...109,934,763
JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:36,180,084...36,213,534
Ensembl chr14:36,180,324...36,213,439
JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in ISO (MGI:6393201|PMID:31495077) UniProt PMID:31495077 MGI:6393201 NCBI chr 8:93,899,666...94,737,123
Ensembl chr 8:93,901,284...94,735,262
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28675177) Ensembl
MGI
PMID:28675177 GO_REF:0000107 NCBI chr18:16,336,959...16,370,208
Ensembl chr18:16,336,921...16,370,291
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344
JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16598713) Ensembl
MGI
PMID:16598713 GO_REF:0000107 NCBI chr 9:30,674,893...30,862,682
Ensembl chr 9:30,674,578...30,863,250
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chr10:29,732,934...29,864,157
Ensembl chr10:29,729,305...29,864,205
JBrowse link
G ZIC1 Zic family member 1 acts_upstream_of_or_within ISO (PMID:11756505)
(PMID:9412507)
MGI PMID:9412507 PMID:11756505 NCBI chr15:43,280,429...43,285,674
Ensembl chr15:43,281,433...43,284,948
JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:11756505) MGI PMID:11756505 NCBI chr 3:78,631,556...78,637,422
Ensembl chr 3:78,631,530...78,636,548
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in ISO (PMID:21533046) MGI PMID:21533046 NCBI chr10:60,644,623...60,734,465
Ensembl chr10:60,644,635...60,734,475
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9140068) Ensembl
MGI
PMID:9140068 GO_REF:0000107 NCBI chr 1:104,774,632...104,843,417
Ensembl chr 1:104,774,180...104,842,736
JBrowse link
G GHRH growth hormone releasing hormone acts_upstream_of_or_within ISO (PMID:15985453) MGI PMID:15985453 NCBI chr 2:26,482,734...26,493,761
Ensembl chr 2:26,487,973...26,493,499
JBrowse link
G GHRHR growth hormone releasing hormone receptor acts_upstream_of_or_within ISO (PMID:1270792), (PMID:1329576), (PMID:1504465) MGI PMID:1270792 PMID:1329576 PMID:1504465 NCBI chr21:27,402,765...27,417,536
Ensembl chr21:27,404,886...27,417,521
JBrowse link
G GSX1 GS homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8631293) Ensembl
MGI
PMID:8631293 GO_REF:0000107 NCBI chr 3:6,920,476...6,925,538
Ensembl chr 3:6,923,832...6,925,091
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18996108) Ensembl
MGI
PMID:18996108 GO_REF:0000107 NCBI chr15:88,220,093...88,222,563
Ensembl chr15:88,220,083...88,223,243
JBrowse link
G POU1F1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chr22:89,649,971...89,668,675
Ensembl chr22:89,649,999...89,668,941
JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chr23:79,704,746...79,710,013
Ensembl chr23:79,705,287...79,708,566
JBrowse link
G SLC6A3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO (PMID:9247269) MGI PMID:9247269 NCBI chr 4:1,209,013...1,258,797
Ensembl chr 4:1,209,019...1,258,866
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr15:7,673,581...7,676,812
Ensembl chr15:7,674,867...7,675,826
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUOX2 dual oxidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17440044) Ensembl
MGI
PMID:17440044 GO_REF:0000107 NCBI chr26:38,090,053...38,110,781
Ensembl chr26:38,090,648...38,109,636
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:79,596,138...79,681,924
Ensembl chr20:79,596,370...79,677,278
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:2664023|PMID:12805306) ARUK-UCL PMID:12805306 MGI:2664023 NCBI chr20:3,801,044...3,828,680
Ensembl chr20:3,802,887...3,828,692
JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12527005) Ensembl
MGI
PMID:12527005 GO_REF:0000107 NCBI chr13:65,663,495...65,686,510
Ensembl chr13:65,664,826...65,685,807
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr 1:68,530,037...68,679,413
Ensembl chr 1:68,529,571...68,617,092
JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24441682) Ensembl
MGI
PMID:24441682 GO_REF:0000107 NCBI chr10:46,819,396...46,831,590
Ensembl chr10:46,819,393...46,828,008
JBrowse link
G UBA6 ubiquitin like modifier activating enzyme 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23499007) Ensembl
MGI
PMID:23499007 GO_REF:0000107 NCBI chr 7:1,246,462...1,320,919
Ensembl chr 7:1,246,500...1,321,056
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 8:60,476,555...60,483,693
Ensembl chr 8:60,480,825...60,481,976
JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,073,073...120,099,835
Ensembl chr20:120,073,430...120,085,279
JBrowse link
G FBXO45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19398581) Ensembl
MGI
PMID:19398581 GO_REF:0000107 NCBI chr15:90,632,389...90,647,431
Ensembl chr15:90,629,330...90,647,191
JBrowse link
G LOC103219433 nuclear factor 1 B-type involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,043,819...65,487,832
Ensembl chr12:65,256,407...65,481,485
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11997145) Ensembl
MGI
PMID:11997145 GO_REF:0000107 NCBI chr13:65,663,495...65,686,510
Ensembl chr13:65,664,826...65,685,807
JBrowse link
G PLXNA4 plexin A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15814794) Ensembl
MGI
PMID:15814794 GO_REF:0000107 NCBI chr21:100,779,307...101,223,184
Ensembl chr21:100,781,779...101,158,801
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21055390) Ensembl
MGI
PMID:21055390 GO_REF:0000107 NCBI chr 1:67,988,729...68,003,959
Ensembl chr 1:68,001,429...68,002,490
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr20:24,535,838...24,604,157
Ensembl chr20:24,535,913...24,604,646
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chr19:7,691,678...7,706,781
Ensembl chr19:7,691,536...7,706,926
JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in ISO (PMID:15457210) ARUK-UCL PMID:15457210 NCBI chr17:39,847,343...39,851,288
Ensembl chr17:39,847,759...39,851,127
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr25:67,964,840...67,977,006
Ensembl chr25:67,962,401...67,973,324
JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306
JBrowse link
G BACE2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr 2:85,079,404...85,194,908
Ensembl chr 2:85,079,812...85,187,944
JBrowse link
G C1QA complement C1q A chain involved_in ISO (MGI:3607035|PMID:15269255) ARUK-UCL PMID:15269255 MGI:3607035 NCBI chr20:110,024,847...110,027,868 JBrowse link
G C5AR1 complement C5a receptor 1 involved_in ISO (MGI:4354701|PMID:19561098) ARUK-UCL PMID:19561098 MGI:4354701 NCBI chr 6:40,633,540...40,651,839
Ensembl chr 6:40,633,448...40,652,845
JBrowse link
G CNTF ciliary neurotrophic factor involved_in ISO
IEA
spinal cord astrocytes RGD
TreeGrafter
PMID:11771938 GO_REF:0000118 RGD:1626172 NCBI chr 1:14,724,562...14,730,698
Ensembl chr 1:14,728,383...14,730,150
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chr21:3,664,622...3,853,492
Ensembl chr21:3,666,339...3,853,239
JBrowse link
G IFNG interferon gamma involved_in ISO (MGI:4454469|PMID:20368278)
(PMID:18375019)
ARUK-UCL PMID:18375019 PMID:20368278 MGI:4454469 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chr13:36,203,038...36,224,039
Ensembl chr13:36,203,004...36,222,542
JBrowse link
G IL1B interleukin 1 beta acts_upstream_of_or_within ISO (PMID:28377412) MGI PMID:28377412 NCBI chr14:15,844,628...15,852,652
Ensembl chr14:15,844,672...15,850,729
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26607664) Ensembl
MGI
PMID:26607664 GO_REF:0000107 NCBI chr16:63,735,411...63,744,365 JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23680462) Ensembl
MGI
PMID:23680462 GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6095556|PMID:29073081) ARUK-UCL PMID:29073081 MGI:6095556 NCBI chr17:30,965,091...30,999,073
Ensembl chr17:30,994,357...30,999,087
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chr10:29,732,934...29,864,157
Ensembl chr10:29,729,305...29,864,205
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306
JBrowse link
G GRN granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chr16:62,037,344...62,045,765
Ensembl chr16:62,036,412...62,045,614
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chr11:53,039,147...53,125,041
Ensembl chr11:53,039,364...53,125,776
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr17:39,847,343...39,851,288
Ensembl chr17:39,847,759...39,851,127
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr13:97,928,480...97,936,594
Ensembl chr13:97,928,634...97,936,589
JBrowse link
G DRD1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17360497) Ensembl
MGI
PMID:17360497 GO_REF:0000107 NCBI chr23:77,587,340...77,591,434 JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chr15:5,278,759...5,289,422
Ensembl chr15:5,278,749...5,289,030
JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chr16:61,489,090...61,499,672
Ensembl chr16:61,489,421...61,500,646
JBrowse link
G LAMB2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chr22:10,523,763...10,535,733
Ensembl chr22:10,523,717...10,536,207
JBrowse link
G LAMC3 laminin subunit gamma 3 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chr12:7,048,396...7,134,405 JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chr  X:91,671,535...91,687,693
Ensembl chr  X:91,671,878...91,687,878
JBrowse link
G ROR1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chr20:68,910,736...69,318,775
Ensembl chr20:68,910,751...68,954,618
JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chr12:102,172,288...102,397,297 JBrowse link
G S100A8 S100 calcium binding protein A8 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr20:10,363,142...10,364,293
Ensembl chr20:10,363,287...10,364,317
JBrowse link
G S100A9 S100 calcium binding protein A9 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr20:10,391,965...10,395,216
Ensembl chr20:10,391,934...10,394,720
JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr12:21,873,762...21,885,562
Ensembl chr12:21,871,773...21,885,515
JBrowse link
G TSPAN2 tetraspanin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chr20:18,604,881...18,647,223
Ensembl chr20:18,604,948...18,649,874
JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chr 9:17,183,466...17,191,771
Ensembl chr 9:17,183,388...17,191,829
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ISO RGD PMID:17141959 RGD:2303044 NCBI chr 5:14,972,589...15,164,594
Ensembl chr 5:14,972,646...15,164,567
JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr10:16,296,350...16,369,561
Ensembl chr10:16,297,502...16,369,220
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:15882580) Ensembl
MGI
PMID:15882580 GO_REF:0000107 NCBI chr 2:31,349,394...31,361,227
Ensembl chr 2:31,348,808...31,360,901
JBrowse link
G CUL4B cullin 4B involved_in ISO (PMID:26025376) MGI PMID:26025376
G DAB1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chr20:74,727,084...75,968,434
Ensembl chr20:75,541,508...75,968,427
JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chr15:5,278,759...5,289,422
Ensembl chr15:5,278,749...5,289,030
JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr15:72,257,626...72,264,563 JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chr27:46,958,444...46,974,032
Ensembl chr27:46,957,254...46,973,392
JBrowse link
G GAP43 growth associated protein 43 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15234344) Ensembl
MGI
PMID:15234344 GO_REF:0000107 NCBI chr22:65,142,472...65,242,185
Ensembl chr22:65,142,039...65,242,222
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:129,023,750...129,028,790
Ensembl chr20:129,027,370...129,028,065
JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr 1:110,457,799...110,466,361
Ensembl chr 1:110,457,537...110,466,095
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr11:61,509,114...61,655,633 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chr17:52,349,908...52,353,218
Ensembl chr17:52,348,388...52,353,281
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr19:16,080,482...16,704,968
Ensembl chr19:16,080,430...16,549,495
JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chr19:13,121,261...13,127,663
Ensembl chr19:13,121,297...13,127,679
JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chr 7:75,043,740...75,096,894
Ensembl chr 7:75,046,545...75,072,258
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr14:91,685,376...91,692,091 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12111813) Ensembl
MGI
PMID:12111813 GO_REF:0000107 NCBI chr16:63,735,411...63,744,365 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of ISO (PMID:10442636), (PMID:9878702)
(PMID:11297510)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307
JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:29106906)
(PMID:21800304)
MGI PMID:21800304 PMID:29106906 NCBI chr 6:11,705,323...11,778,943
Ensembl chr 6:11,706,060...11,776,083
JBrowse link
G NKX2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19258013) Ensembl
MGI
PMID:19258013 GO_REF:0000107 NCBI chr 2:50,499,802...50,511,309
Ensembl chr 2:50,500,691...50,502,438
JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:14702088) Ensembl
MGI
PMID:14702088 GO_REF:0000107 NCBI chr13:65,663,495...65,686,510
Ensembl chr13:65,664,826...65,685,807
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:45,904,926...46,031,804
Ensembl chr23:45,904,873...46,031,125
JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within
involved_in
ISO (PMID:19258013)
(PMID:30186101)
RGD
MGI
PMID:19258013 PMID:22944581 PMID:30186101 RGD:8552357 NCBI chr 1:33,386,165...33,414,605
Ensembl chr 1:33,392,970...33,414,587
JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chr 2:90,188,820...90,194,986
Ensembl chr 2:90,188,639...90,195,023
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10357934) Ensembl
MGI
PMID:10357934 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G SOX6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chr 1:48,206,243...48,955,819 JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984
JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:15590934) MGI PMID:15590934 NCBI chr 9:109,925,282...109,935,003
Ensembl chr 9:109,930,708...109,934,763
JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in ISO (PMID:29890290) MGI PMID:29890290 NCBI chr14:43,000,960...43,127,129
Ensembl chr14:43,008,915...43,125,850
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCM1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14573516) Ensembl
MGI
PMID:14573516 GO_REF:0000107 NCBI chr17:19,421,054...19,444,311
Ensembl chr17:19,424,896...19,443,079
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chr 5:877,988...883,278
Ensembl chr 5:878,217...881,662
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chr20:85,681,247...85,697,887
Ensembl chr20:85,688,155...85,694,829
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr25:50,106,621...50,244,002
Ensembl chr25:50,216,483...50,241,621
JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chr16:61,489,090...61,499,672
Ensembl chr16:61,489,421...61,500,646
JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:24062445) Ensembl
MGI
PMID:24062445 GO_REF:0000107 NCBI chr25:27,276,393...27,283,231
Ensembl chr25:27,277,360...27,283,350
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr26:17,059,122...17,168,787
Ensembl chr26:17,060,054...17,168,782
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr 5:26,536,471...26,545,666
Ensembl chr 5:26,536,532...26,546,461
JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21319224) Ensembl
MGI
PMID:21319224 GO_REF:0000107 NCBI chr20:76,382,041...76,466,497
Ensembl chr20:76,382,079...76,477,847
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr11:107,658,495...107,754,457
Ensembl chr11:107,658,453...107,752,637
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10375501) Ensembl
MGI
PMID:10375501 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G TTC21B tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chr10:51,365,156...51,449,207
Ensembl chr10:51,364,889...51,449,183
JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chr 9:17,183,466...17,191,771
Ensembl chr 9:17,183,388...17,191,829
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AATK apoptosis associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:22573681) MGI PMID:22573681 NCBI chr16:73,065,222...73,112,198
Ensembl chr16:73,067,614...73,106,366
JBrowse link
G ABCB6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:105,113,729...105,122,948
Ensembl chr10:105,112,797...105,122,358
JBrowse link
G ABR ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chr16:732,556...947,329
Ensembl chr16:735,211...847,690
JBrowse link
G ACHE acetylcholinesterase (Cartwright blood group) ISO RGD PMID:20147288 RGD:405855864 NCBI chr28:12,328,304...12,335,302
Ensembl chr28:12,331,039...12,335,076
JBrowse link
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:43,559,792...43,595,906
Ensembl chr 5:43,570,189...43,596,087
JBrowse link
G AFG2A AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) UniProt PMID:26299366 NCBI chr 7:70,188,246...70,585,022 JBrowse link
G AIM2 absent in melanoma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:4,759,746...4,884,460
Ensembl chr20:4,873,008...4,884,764
JBrowse link
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chr24:74,275,451...74,376,032
Ensembl chr24:74,275,637...74,377,562
JBrowse link
G ALK ALK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:17487225) MGI PMID:17487225 NCBI chr14:77,632,809...78,408,307 JBrowse link
G ALK ALK receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr14:78,200,889...78,406,094 JBrowse link
G AMIGO1 adhesion molecule with Ig like domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:24,037,679...24,040,566
Ensembl chr20:24,038,475...24,039,956
JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:43,281,634...43,285,016
Ensembl chr11:43,282,518...43,284,083
JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) UniProt PMID:34942119 NCBI chr11:105,612,881...105,640,147 JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:105,616,942...105,640,144 JBrowse link
G APAF1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9753321) Ensembl
MGI
PMID:9753321 GO_REF:0000107 NCBI chr11:93,942,137...94,024,728
Ensembl chr11:93,942,103...94,024,457
JBrowse link
G APOD apolipoprotein D involved_in IEA InterPro GO_REF:0000002 NCBI chr15:89,612,210...89,624,038
Ensembl chr15:89,612,040...89,624,012
JBrowse link
G ARL6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chr22:82,909,453...82,946,253
Ensembl chr22:82,905,910...82,946,149
JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:2,790,059...2,990,760
Ensembl chr26:2,794,372...2,990,814
JBrowse link
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) MGI PMID:20823249 NCBI chr25:32,269,518...32,334,617
Ensembl chr25:32,281,424...32,334,977
JBrowse link
G ATM ATM serine/threonine kinase acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
JBrowse link
G ATOH1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chr 7:42,098,057...42,104,910
Ensembl chr 7:42,100,996...42,102,060
JBrowse link
G ATXN1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr17:55,810,621...55,832,565
Ensembl chr17:55,810,279...55,832,472
JBrowse link
G ATXN1L ataxin 1 like involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 5:54,987,876...54,996,932
Ensembl chr 5:54,989,527...54,991,596
JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chr 3:10,058,041...10,178,996
Ensembl chr 3:10,059,196...10,179,037
JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO (PMID:19265195) MGI PMID:19265195 NCBI chr20:88,814,667...88,826,688 JBrowse link
G BAG6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386
G BBS7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22228099) Ensembl
MGI
PMID:22228099 GO_REF:0000107 NCBI chr 7:69,100,287...69,153,009
Ensembl chr 7:69,101,662...69,152,768
JBrowse link
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chr19:2,569,841...2,703,703
Ensembl chr19:2,566,190...2,702,920
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in ISO (MGI:5544381|PMID:24074871)
(PMID:24074871)
UniProt PMID:24074871 MGI:5544381 NCBI chr20:7,623,716...7,626,353
Ensembl chr20:7,623,883...7,624,812
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (PMID:7926765) MGI PMID:7926765 NCBI chr 9:22,095,592...22,104,894 JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,478,706...53,634,617
Ensembl chr16:53,478,464...53,634,183
JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chr 3:11,070,086...11,155,257
Ensembl chr 3:11,071,682...11,155,213
JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5770105|PMID:27042284) UniProt PMID:27042284 MGI:5770105 NCBI chr12:20,189,270...20,387,494
Ensembl chr12:20,189,295...20,388,089
JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr 1:65,282,311...65,436,007
Ensembl chr 1:65,282,318...65,435,834
JBrowse link
G CCDC141 coiled-coil domain containing 141 involved_in ISO (MGI:6739960|PMID:34298015) UniProt PMID:34298015 MGI:6739960 NCBI chr10:64,378,339...64,602,307
Ensembl chr10:64,392,414...64,590,923
JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29317443) Ensembl
MGI
PMID:29317443 GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523
JBrowse link
G CDH2 cadherin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:52,426,381...52,652,986
Ensembl chr18:52,426,077...52,654,828
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:26,044,751...26,048,920
Ensembl chr16:26,045,061...26,049,101
JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 involved_in ISO (MGI:4454588|PMID:20460369) UniProt PMID:20460369 MGI:4454588 NCBI chr12:18,999,203...19,186,801
Ensembl chr12:18,999,213...19,186,785
JBrowse link
G CERS1 ceramide synthase 1 acts_upstream_of_or_within ISO (PMID:15248193) MGI PMID:15248193 NCBI chr 6:17,331,021...17,351,542 JBrowse link
G CFAP43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) MGI PMID:31004071 NCBI chr 9:97,179,767...97,283,267
Ensembl chr 9:97,179,647...97,283,225
JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27602517) Ensembl
MGI
PMID:27602517 GO_REF:0000107 NCBI chr29:21,856,434...21,924,761
Ensembl chr29:21,856,263...21,924,787
JBrowse link
G CIC capicua transcriptional repressor involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr 6:36,472,991...36,500,479 JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (MGI:3693257|PMID:17047318) UniProt PMID:17047318 MGI:3693257 NCBI chr  X:62,126,383...62,131,919
Ensembl chr  X:62,126,320...62,130,220
JBrowse link
G CLN5 CLN5 intracellular trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,074,701...56,086,433
Ensembl chr 3:56,076,226...56,086,963
JBrowse link
G CNTN2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:24,262,092...24,296,740
Ensembl chr25:24,261,651...24,296,850
JBrowse link
G CNTN4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr22:38,177,481...39,145,568
Ensembl chr22:38,813,569...39,146,953
JBrowse link
G CNTN6 contactin 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:37,212,995...37,518,060
Ensembl chr22:37,343,770...37,517,626
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) BHF-UCL PMID:16107487 NCBI chr 3:88,410,800...88,564,191
Ensembl chr 3:88,412,168...88,564,057
JBrowse link
G CWH43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chr27:1,199,363...1,281,422
Ensembl chr27:1,199,370...1,281,308
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:136,757...153,316
Ensembl chr15:150,718...151,785
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chr 9:40,005,580...40,020,513
Ensembl chr 9:40,011,439...40,020,494
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12183377) MGI
TreeGrafter
PMID:12183377 GO_REF:0000118 NCBI chr10:20,336,470...20,340,308
Ensembl chr10:20,336,247...20,340,309
JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr 3:14,358,997...14,713,621
Ensembl chr 3:14,362,301...14,536,027
JBrowse link
G DCX doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr  X:99,106,291...99,220,479
Ensembl chr  X:99,120,505...99,220,237
JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr 9:59,033,058...59,035,157
Ensembl chr 9:59,032,755...59,035,241
JBrowse link
G DHX37 DEAH-box helicase 37 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:120,304,767...120,347,439
Ensembl chr11:120,304,314...120,347,227
JBrowse link
G DIAPH1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chr23:44,139,495...44,244,505
Ensembl chr23:44,139,360...44,244,490
JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:86,294,309...86,315,688
Ensembl chr20:86,295,354...86,300,816
JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr26:31,750,419...31,922,022
Ensembl chr26:31,750,403...31,922,208
JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,383,068...9,385,590
Ensembl chr28:9,383,095...9,383,775
JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,801,895...109,167,011
Ensembl chr 1:108,802,452...108,906,272
JBrowse link
G EML1 EMAP like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:77,694,931...77,907,574
Ensembl chr24:77,694,971...77,907,909
JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12561075)
(PMID:12091317)
MGI PMID:12091317 PMID:12561075 NCBI chr14:34,232,425...34,250,807
Ensembl chr14:34,232,819...34,249,253
JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12196586), (PMID:12209834), (PMID:12561075)
(PMID:12091317)
Ensembl
MGI
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000107 NCBI chr 9:110,347,043...110,353,647
Ensembl chr 9:110,347,379...110,353,643
JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:17353897) UniProt PMID:17353897 NCBI chr15:72,257,626...72,264,563 JBrowse link
G EOMES eomesodermin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:72,257,615...72,263,264 JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,097,051...18,283,664
Ensembl chr13:18,099,005...18,281,415
JBrowse link
G EPOR erythropoietin receptor acts_upstream_of_or_within ISO (PMID:11807041) MGI PMID:11807041 NCBI chr 6:10,313,382...10,320,196
Ensembl chr 6:10,313,775...10,320,066
JBrowse link
G ESR2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (PMID:14605369) MGI PMID:14605369 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12682014) Ensembl
MGI
PMID:12682014 GO_REF:0000107 NCBI chr 8:36,426,116...36,485,683
Ensembl chr 8:36,427,110...36,485,508
JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20675713)
(PMID:23591631)
(PMID:26306834)
Ensembl
MGI
PMID:20675713 PMID:23591631 PMID:26306834 GO_REF:0000107 NCBI chr 6:40,100,399...40,128,340
Ensembl chr 6:40,126,321...40,127,808
JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr12:33,872,165...33,964,105
Ensembl chr12:33,900,362...33,953,377
JBrowse link
G FLVCR2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chr24:52,820,221...52,892,367
Ensembl chr24:52,820,592...52,890,667
JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:4784576), (PMID:5500588)
(PMID:9635428)
Ensembl
MGI
PMID:4784576 PMID:5500588 PMID:9635428 GO_REF:0000107 NCBI chr17:70,533,048...70,536,555
Ensembl chr17:70,534,821...70,536,476
JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299
JBrowse link
G FOXR1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chr 1:110,348,860...110,359,394
Ensembl chr 1:110,349,475...110,359,345
JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chr26:55,319,667...55,543,116
Ensembl chr26:55,471,907...55,538,855
JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr 5:75,353,493...75,370,012
Ensembl chr 5:75,354,117...75,371,796
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:23,313,629...23,329,665
Ensembl chr16:23,315,439...23,329,469
JBrowse link
G GIT2 GIT ArfGAP 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr11:105,171,441...105,235,661
Ensembl chr11:105,169,099...105,235,290
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8026071)
(PMID:12435361), (PMID:17395647)
Ensembl
MGI
PMID:8026071 PMID:12435361 PMID:17395647 GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238
JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in ISO (PMID:28851741) UniProt PMID:28851741 NCBI chr 9:24,903,263...25,310,817 JBrowse link
G GRHL2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21377456) MGI
TreeGrafter
PMID:21377456 GO_REF:0000118 NCBI chr 8:96,340,459...96,526,366
Ensembl chr 8:96,342,189...96,526,363
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12930780) Ensembl
MGI
PMID:12930780 GO_REF:0000107 NCBI chr 7:14,436,848...14,446,197
Ensembl chr 7:14,439,371...14,440,944
JBrowse link
G H2AFY2 H2A histone family member Y2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,194,887...61,254,361
Ensembl chr 9:61,195,431...61,231,228
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr26:19,713,780...19,930,807
Ensembl chr26:19,713,617...19,930,937
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:129,023,750...129,028,790
Ensembl chr20:129,027,370...129,028,065
JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:11291863) MGI PMID:11291863 NCBI chr22:18,517,067...18,546,882 JBrowse link
G HESX1 HESX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:18,517,111...18,518,181 JBrowse link
G HMX2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chr 9:115,818,448...115,825,664
Ensembl chr 9:115,819,760...115,821,508
JBrowse link
G HMX3 H6 family homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chr 9:115,805,404...115,809,650
Ensembl chr 9:115,807,486...115,809,172
JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chr20:1,271,259...1,289,232
Ensembl chr20:1,273,052...1,288,930
JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr20:110,693,858...110,809,467
Ensembl chr20:110,693,854...110,809,466
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chr 5:53,950,286...54,435,770
Ensembl chr 5:53,950,886...54,335,689
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chr17:52,349,908...52,353,218
Ensembl chr17:52,348,388...52,353,281
JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:33,767,897...33,789,114
Ensembl chr18:33,767,957...33,790,095
JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chr14:80,130,436...80,171,259 JBrowse link
G IFT172 intraflagellar transport 172 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr14:80,138,354...80,171,200 JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983)
(PMID:22228099)
MGI PMID:19036983 PMID:22228099 NCBI chr 3:435,649...546,661
Ensembl chr 3:436,207...546,583
JBrowse link
G IGF1R insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr29:17,212,206...17,534,036
Ensembl chr29:17,459,404...17,526,930
JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chr21:79,530,113...80,388,851 JBrowse link
G IRS2 insulin receptor substrate 2 acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr 3:88,045,439...88,076,468 JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23906841) Ensembl
MGI
PMID:23906841 GO_REF:0000107 NCBI chr 1:114,275,896...114,354,819
Ensembl chr 1:114,276,335...114,352,816
JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:4,956,824...4,963,732
Ensembl chr11:4,956,856...4,958,343
JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chr 2:739,965...803,575
Ensembl chr 2:761,952...802,999
JBrowse link
G KDM4B lysine demethylase 4B involved_in ISO (MGI:6101669|PMID:27023172) UniProt PMID:27023172 MGI:6101669 NCBI chr 6:4,649,140...4,831,634
Ensembl chr 6:4,649,221...4,831,636
JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr25:28,379,019...28,434,172
Ensembl chr25:28,379,014...28,434,170
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:29360985)
(PMID:26306834), (PMID:29360985)
MGI PMID:26306834 PMID:29360985 NCBI chr19:16,080,482...16,704,968
Ensembl chr19:16,080,430...16,549,495
JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14566948), (PMID:15295034) Ensembl
MGI
PMID:14566948 PMID:15295034 GO_REF:0000107 NCBI chr12:14,110,122...14,133,411
Ensembl chr12:14,110,068...14,132,026
JBrowse link
G LOC103219433 nuclear factor 1 B-type involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,043,819...65,487,832
Ensembl chr12:65,256,407...65,481,485
JBrowse link
G LOC103219825 protein patched homolog 1 involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr12:107,580,895...107,656,443
Ensembl chr12:107,590,663...107,652,985
JBrowse link
G LOC103231569 testis-specific basic protein Y 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:6,938,188...6,939,722 JBrowse link
G LOC103242158 cystinosin involved_in ISO (PMID:17471495) UniProt PMID:17471495 NCBI chr16:3,138,716...3,164,512
Ensembl chr16:3,138,734...3,164,625
JBrowse link
G MACO1 macoilin 1 involved_in ISO (MGI:3052424|PMID:15255972) BHF-UCL PMID:15255972 MGI:3052424 NCBI chr20:107,272,473...107,340,976
Ensembl chr20:107,269,979...107,340,795
JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in ISO (MGI:4887328|PMID:17586838) UniProt PMID:17586838 MGI:4887328 NCBI chr 2:42,891,656...44,973,129 JBrowse link
G MAP1S microtubule associated protein 1S involved_in ISO (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chr 6:16,192,707...16,208,729
Ensembl chr 6:16,192,734...16,209,553
JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in ISO (MGI:6269299|PMID:30449657)
(PMID:30449657)
UniProt PMID:30449657 MGI:6269299 NCBI chr 6:11,516,337...11,555,940
Ensembl chr 6:11,520,813...11,557,680
JBrowse link
G MATCAP1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISO (MGI:7285999|PMID:35482892) UniProt PMID:35482892 MGI:7285999 NCBI chr 5:60,272,471...60,280,277
Ensembl chr 5:60,276,145...60,279,940
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr17:34,443,453...34,506,531
Ensembl chr17:34,474,974...34,501,685
JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chr  X:128,445,028...128,519,892
Ensembl chr  X:128,453,577...128,455,785
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10882104) Ensembl
MGI
PMID:10882104 GO_REF:0000107 NCBI chr16:66,719,393...66,764,902
Ensembl chr16:66,719,423...66,762,896
JBrowse link
G MEIS1 Meis homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:40,473,148...40,613,245
Ensembl chr14:40,471,063...40,611,071
JBrowse link
G MEIS2 Meis homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:45,844,214...46,054,325 JBrowse link
G MEIS3 Meis homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:40,730,208...40,747,086
Ensembl chr 6:40,729,230...40,746,741
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chr21:85,370,574...85,486,405
Ensembl chr21:85,397,645...85,488,093
JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:6196220|PMID:30074985)
(PMID:26005865), (PMID:26005868)
Ensembl
ARUK-UCL
PMID:26005865 PMID:26005868 PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chr20:92,926,217...92,941,191
Ensembl chr20:92,926,067...92,941,159
JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chr16:4,305,680...4,370,554
Ensembl chr16:4,305,701...4,369,780
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chr16:7,837,527...7,989,687
Ensembl chr16:7,835,843...7,989,788
JBrowse link
G NAPA NSF attachment protein alpha acts_upstream_of_or_within ISO (PMID:11706940) MGI PMID:11706940 NCBI chr 6:40,818,490...40,845,661
Ensembl chr 6:40,818,175...40,845,470
JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chr 2:39,013,364...39,129,723
Ensembl chr 2:39,013,232...39,129,658
JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28916769) Ensembl
MGI
PMID:28916769 GO_REF:0000107 NCBI chr 4:49,851,012...49,967,533
Ensembl chr 4:49,851,014...49,967,590
JBrowse link
G NEGR1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chr20:60,848,712...61,731,563 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307
JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23863479) Ensembl
MGI
PMID:23863479 GO_REF:0000107 NCBI chr19:12,474,479...12,572,144
Ensembl chr19:12,474,468...12,572,250
JBrowse link
G NFASC neurofascin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:24,315,877...24,516,524
Ensembl chr25:24,321,574...24,474,635
JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr 6:11,705,323...11,778,943
Ensembl chr 6:11,706,060...11,776,083
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11971878)
(PMID:12930780)
(PMID:8557195)
UniProt
MGI
PMID:8557195 PMID:11971878 PMID:12930780 NCBI chr24:13,274,118...13,317,533
Ensembl chr24:13,310,846...13,317,056
JBrowse link
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr25:59,685,437...59,899,458
Ensembl chr25:59,685,531...59,898,677
JBrowse link
G NNAT neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:26,229,765...26,232,249
Ensembl chr 2:26,230,696...26,232,127
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 9:60,852,567...60,863,225
Ensembl chr 9:60,853,763...60,862,839
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12397106) Ensembl
MGI
PMID:12397106 GO_REF:0000107 NCBI chr16:36,816,783...36,818,693
Ensembl chr16:36,817,476...36,818,174
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14994267) Ensembl
MGI
PMID:14994267 GO_REF:0000107 NCBI chr13:65,663,495...65,686,510
Ensembl chr13:65,664,826...65,685,807
JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chr11:5,477,208...5,542,404 JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31383820) Ensembl
MGI
PMID:31383820 GO_REF:0000107 NCBI chr 6:10,349,063...10,360,292
Ensembl chr 6:10,349,069...10,360,250
JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:27486780) MGI PMID:27486780 NCBI chr16:64,297,983...64,333,421 JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:10409504), (PMID:12196586) MGI PMID:10409504 PMID:12196586 NCBI chr 1:33,386,165...33,414,605
Ensembl chr 1:33,392,970...33,414,587
JBrowse link
G PBX1 PBX homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:63,990,553...64,317,901
Ensembl chr25:63,989,612...64,084,673
JBrowse link
G PBX2 PBX homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:39,841,798...39,847,244
Ensembl chr17:39,842,064...39,845,618
JBrowse link
G PBX3 PBX homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:12,174,407...12,400,184 JBrowse link
G PBX4 PBX homeobox 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:18,022,925...18,078,184
Ensembl chr 6:18,023,232...18,032,069
JBrowse link
G PCDH18 protocadherin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:84,509,271...84,522,975
Ensembl chr 7:84,509,838...84,522,893
JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,764,329...32,797,223
Ensembl chr19:32,764,272...32,784,566
JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO (PMID:26306834) MGI PMID:26306834 NCBI chr20:86,588,049...86,597,576
Ensembl chr20:86,588,550...86,599,107
JBrowse link
G POMK protein O-mannose kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chr 8:41,102,872...41,137,866
Ensembl chr 8:41,098,891...41,131,309
JBrowse link
G POU3F1 POU class 3 homeobox 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:94,823,724...94,826,715
Ensembl chr20:94,823,783...94,825,141
JBrowse link
G POU3F2 POU class 3 homeobox 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:75,027,360...75,032,222
Ensembl chr13:75,030,677...75,032,008
JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA InterPro GO_REF:0000002
G POU3F4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:72,379,656...72,381,186
Ensembl chr  X:72,379,979...72,381,064
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:92,809,373...92,833,048
Ensembl chr20:92,809,552...92,833,244
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 NCBI chr 8:43,915,226...44,119,547
Ensembl chr 8:43,914,636...44,119,541
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:15,533,546...15,592,834
Ensembl chr25:15,538,964...15,587,059
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9153393) Ensembl
MGI
PMID:9153393 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:107,658,495...107,754,457
Ensembl chr11:107,658,453...107,752,637
JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17425782) Ensembl
MGI
PMID:17425782 GO_REF:0000107 NCBI chr20:8,866,928...8,871,645
Ensembl chr20:8,866,711...8,871,770
JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in ISO (PMID:24656866) UniProt PMID:24656866 NCBI chr22:10,497,921...10,507,673
Ensembl chr22:10,497,658...10,507,325
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:19,295,294...19,401,595
Ensembl chr10:19,295,351...19,402,212
JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15789424) Ensembl
MGI
PMID:15789424 GO_REF:0000107 NCBI chr18:20,464,417...20,469,281
Ensembl chr18:20,464,657...20,468,812
JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chr21:72,440,988...72,951,173
Ensembl chr21:72,440,160...72,950,747
JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chr22:99,334,033...101,101,924 JBrowse link
G ROGDI rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:38172607) Ensembl
MGI
PMID:38172607 GO_REF:0000107 NCBI chr 5:4,466,954...4,472,967
Ensembl chr 5:4,466,824...4,472,780
JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904), (PMID:17558409) MGI PMID:17553904 PMID:17558409 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092
JBrowse link
G RTN1 reticulon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:36,821,989...37,092,718 JBrowse link
G RTN4 reticulon 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:51,876,697...51,955,788 JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr20:32,109,436...32,117,015
Ensembl chr20:32,110,819...32,111,967
JBrowse link
G SCYL2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chr11:95,582,856...95,655,974 JBrowse link
G SELENOP selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chr 4:41,544,098...41,556,152 JBrowse link
G SEPTIN4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chr16:34,863,357...34,887,433 JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:27,645,908...27,675,500
Ensembl chr 5:27,648,378...27,674,860
JBrowse link
G SHROOM4 shroom family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:47,392,156...47,618,816
Ensembl chr  X:47,397,570...47,616,973
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12569128) MGI
TreeGrafter
PMID:12569128 GO_REF:0000118 NCBI chr14:62,278,124...62,292,942
Ensembl chr14:62,278,461...62,281,127
JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in ISO (PMID:28886095) MGI PMID:28886095 NCBI chr12:74,949,560...75,041,455
Ensembl chr12:74,949,028...75,041,369
JBrowse link
G SLC23A1 solute carrier family 23 member 1 involved_in ISO (MGI:2178849|PMID:11984597) UniProt PMID:11984597 MGI:2178849 NCBI chr23:42,040,163...42,056,593
Ensembl chr23:42,044,590...42,055,831
JBrowse link
G SLC6A17 solute carrier family 6 member 17 involved_in ISO (MGI:5634854|PMID:25704603) UniProt PMID:25704603 MGI:5634854 NCBI chr20:23,337,883...23,389,513
Ensembl chr20:23,337,699...23,389,362
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17035536) Ensembl
MGI
PMID:17035536 GO_REF:0000107 NCBI chr 7:85,149,810...85,225,061
Ensembl chr 7:85,154,068...85,225,144
JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
(PMID:22516202)
HGNC-UCL
MGI
PMID:14609955 PMID:22516202 NCBI chr  X:104,690,937...104,768,326
Ensembl chr  X:104,690,689...104,768,298
JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,253,023...37,277,536
Ensembl chr 6:37,250,791...37,277,557
JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in ISO (PMID:32442410) UniProt PMID:32442410 NCBI chr 1:48,206,243...48,955,819 JBrowse link
G SPHK1 sphingosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr16:45,290,147...45,295,175
Ensembl chr16:45,290,421...45,293,128
JBrowse link
G SPHK2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr 6:41,865,921...41,881,889
Ensembl chr 6:41,867,139...41,881,268
JBrowse link
G STK36 serine/threonine kinase 36 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chr10:104,575,944...104,606,923
Ensembl chr10:104,576,666...104,607,946
JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15690082) Ensembl
MGI
PMID:15690082 GO_REF:0000107 NCBI chr20:24,779,510...24,840,668
Ensembl chr20:24,779,271...24,840,643
JBrowse link
G SVBP small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr20:90,115,509...90,128,169
Ensembl chr20:90,116,353...90,127,807
JBrowse link
G TBC1D23 TBC1 domain family member 23 involved_in ISO (PMID:28823706), (PMID:28823707) UniProt PMID:28823706 PMID:28823707 NCBI chr22:80,555,115...80,619,251
Ensembl chr22:80,554,669...80,619,234
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711
JBrowse link
G TMX2 thioredoxin related transmembrane protein 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:15,489,471...15,515,722
Ensembl chr 1:15,490,195...15,515,687
JBrowse link
G TUBGCP2 tubulin gamma complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:53,129,752...53,157,576
Ensembl chr26:53,126,973...53,151,631
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chr11:2,956,762...3,005,309
Ensembl chr11:2,956,895...3,006,735
JBrowse link
G UFC1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chr20:2,826,909...2,848,210 JBrowse link
G UFM1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chr 3:16,812,925...16,826,011
Ensembl chr 3:16,813,148...16,823,910
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:43,127,718...43,181,348
Ensembl chr14:43,128,055...43,180,569
JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr22:2,731,174...3,398,885
Ensembl chr22:2,731,308...3,398,912
JBrowse link
G UNC5C unc-5 netrin receptor C acts_upstream_of_or_within ISO (PMID:1401878), (PMID:9550145)
(PMID:10818148)
(PMID:9126743)
MGI PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 NCBI chr 7:43,405,666...43,786,436 JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644
G UTP3 UTP3 small subunit processome component involved_in ISO (MGI:2136064|PMID:11404095) UniProt PMID:11404095 MGI:2136064 NCBI chr 7:19,196,995...19,199,149
Ensembl chr 7:19,197,280...19,198,725
JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10601035)
(PMID:10601036)
MGI
TreeGrafter
PMID:10601035 PMID:10601036 GO_REF:0000118 NCBI chr 9:109,925,282...109,935,003
Ensembl chr 9:109,930,708...109,934,763
JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:36,180,084...36,213,534
Ensembl chr14:36,180,324...36,213,439
JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chr 8:93,899,666...94,737,123
Ensembl chr 8:93,901,284...94,735,262
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr20:24,535,838...24,604,157
Ensembl chr20:24,535,913...24,604,646
JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:43,280,429...43,285,674
Ensembl chr15:43,281,433...43,284,948
JBrowse link
G ZNF335 zinc finger protein 335 involved_in ISO (MGI:5468205|PMID:23178126)
(PMID:23178126)
UniProt PMID:23178126 MGI:5468205 NCBI chr 2:17,912,892...17,937,546
Ensembl chr 2:17,914,387...17,937,313
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr13:95,646,820...95,788,662
Ensembl chr13:95,646,887...95,789,437
JBrowse link
G AKT3 AKT serine/threonine kinase 3 acts_upstream_of_or_within ISO (PMID:15713641) MGI PMID:15713641 NCBI chr25:80,509,701...80,878,792
Ensembl chr25:80,515,168...80,816,018
JBrowse link
G BBS1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr 1:7,737,887...7,765,022
Ensembl chr 1:7,737,578...7,764,732
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr 5:42,395,387...42,430,204
Ensembl chr 5:42,395,230...42,430,154
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr26:10,742,982...10,799,615
Ensembl chr26:10,743,850...10,775,908
JBrowse link
G CDH2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583) Ensembl
MGI
PMID:25100583 GO_REF:0000107 NCBI chr18:52,426,381...52,652,986
Ensembl chr18:52,426,077...52,654,828
JBrowse link
G CTNNA2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr14:26,579,012...27,729,581
Ensembl chr14:26,578,896...26,836,423
JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:25100583)
(PMID:23178126)
MGI PMID:23178126 PMID:25100583 NCBI chr14:34,232,425...34,250,807
Ensembl chr14:34,232,819...34,249,253
JBrowse link
G FANCC FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr12:107,780,087...107,991,828
Ensembl chr12:107,845,135...107,991,237
JBrowse link
G FANCD2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr22:46,072,797...46,141,107
Ensembl chr22:46,072,761...46,140,713
JBrowse link
G FOXO3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chr13:65,175,764...65,303,107
Ensembl chr13:65,195,376...65,301,725
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G LOC103216393 paired box protein Pax-2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr 9:93,763,975...93,847,180 JBrowse link
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr 2:27,728,295...27,757,569
Ensembl chr 2:27,736,537...27,757,237
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr 6:11,705,323...11,778,943
Ensembl chr 6:11,706,060...11,776,083
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:2,270,126...2,293,705
Ensembl chr16:2,270,085...2,296,825
JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr 2:89,934,888...90,046,767
Ensembl chr 2:89,936,210...90,046,328
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17614943) Ensembl
MGI
PMID:17614943 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chr25:2,862,354...2,888,735
Ensembl chr25:2,862,251...2,877,386
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:33,155,695...33,209,679
Ensembl chr19:33,155,770...33,208,224
JBrowse link
G SLC4A10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18165320) Ensembl
MGI
PMID:18165320 GO_REF:0000107 NCBI chr10:47,029,924...47,390,116
Ensembl chr10:47,030,231...47,390,123
JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,929,196...23,969,665
Ensembl chr16:23,927,311...23,955,616
JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chr 4:34,466,825...34,652,272
Ensembl chr 4:34,466,931...34,652,289
JBrowse link
G VPS51 VPS51 subunit of GARP complex involved_in ISO (PMID:30624672), (PMID:31207318) UniProt PMID:30624672 PMID:31207318 NCBI chr 1:9,117,080...9,142,070
Ensembl chr 1:9,116,723...9,142,031
JBrowse link
G ZNF335 zinc finger protein 335 acts_upstream_of_or_within ISO (PMID:23178126) MGI PMID:23178126 NCBI chr 2:17,912,892...17,937,546
Ensembl chr 2:17,914,387...17,937,313
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7903221) Ensembl
MGI
PMID:7903221 GO_REF:0000107 NCBI chr 9:68,472,640...68,479,612
Ensembl chr 9:68,475,102...68,479,595
JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:9367425) MGI PMID:9367425 NCBI chr21:31,261,992...31,271,071
Ensembl chr21:31,266,459...31,268,221
JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7925021) Ensembl
MGI
PMID:7925021 GO_REF:0000107 NCBI chr 2:23,092,547...23,097,721
Ensembl chr 2:23,094,713...23,095,684
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:18579678) Ensembl
MGI
PMID:18579678 GO_REF:0000107 NCBI chr15:88,220,093...88,222,563
Ensembl chr15:88,220,083...88,223,243
JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chr 7:60,296,442...60,299,093
Ensembl chr 7:60,297,586...60,298,404
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15548218) Ensembl
MGI
PMID:15548218 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:82,799,147...83,392,568
Ensembl chr21:83,129,308...83,389,483
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr 2:51,577,127...51,585,168
Ensembl chr 2:51,577,833...51,580,297
JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:10357893) MGI PMID:10357893 NCBI chr22:52,549,112...52,562,911
Ensembl chr22:52,555,738...52,562,909
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:36,816,783...36,818,693
Ensembl chr16:36,817,476...36,818,174
JBrowse link
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr27:8,602,764...8,608,052
Ensembl chr27:8,603,484...8,606,299
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOTCH1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:23,502,048...23,505,390
Ensembl chr26:23,503,545...23,504,522
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3723363|PMID:17573818) UniProt
Ensembl
PMID:17573818 GO_REF:0000107 MGI:3723363 NCBI chr20:17,865,226...17,869,955
Ensembl chr20:17,867,929...17,868,336
JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272) MGI PMID:8955272 NCBI chr 3:57,667,248...57,673,071 JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,189,547...1,199,906
Ensembl chr14:1,189,495...1,199,446
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) MGI PMID:25099998 NCBI chr 5:14,434,349...14,600,624
Ensembl chr 5:14,434,365...14,600,935
JBrowse link
G DAB2IP DAB2 interacting protein involved_in ISO (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chr12:17,802,030...18,017,648
Ensembl chr12:17,801,831...17,830,890
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10970885) Ensembl
MGI
PMID:10970885 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15677725) Ensembl
MGI
PMID:15677725 GO_REF:0000107 NCBI chr  X:23,499,791...23,518,333
Ensembl chr  X:23,500,454...23,511,524
JBrowse link
G DISC1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr25:68,886,451...69,274,774
Ensembl chr25:68,946,430...69,263,198
JBrowse link
G DIXDC1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chr 1:103,276,780...103,377,110
Ensembl chr 1:103,286,346...103,378,387
JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10729342) Ensembl
MGI
PMID:10729342 GO_REF:0000107 NCBI chr 9:110,347,043...110,353,647
Ensembl chr 9:110,347,379...110,353,643
JBrowse link
G FABP7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chr13:51,021,485...51,026,060
Ensembl chr13:51,021,501...51,026,038
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16613831) Ensembl
MGI
PMID:16613831 GO_REF:0000107 NCBI chr 9:94,797,157...94,803,725
Ensembl chr 9:94,798,088...94,803,629
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chr11:61,509,114...61,655,633 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:28,789,952...28,856,713
Ensembl chr25:28,789,614...28,856,570
JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10325223) Ensembl
MGI
PMID:10325223 GO_REF:0000107 NCBI chr11:108,718,452...108,727,156
Ensembl chr11:108,718,925...108,727,139
JBrowse link
G LOC103219433 nuclear factor 1 B-type involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,043,819...65,487,832
Ensembl chr12:65,256,407...65,481,485
JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr11:119,675,363...119,917,059
Ensembl chr11:119,676,345...119,917,000
JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr 6:11,705,323...11,778,943
Ensembl chr 6:11,706,060...11,776,083
JBrowse link
G NGF nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr20:18,361,795...18,413,987
Ensembl chr20:18,413,108...18,413,833
JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr 1:62,606,112...62,649,979
Ensembl chr 1:62,604,486...62,650,200
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chr14:62,278,124...62,292,942
Ensembl chr14:62,278,461...62,281,127
JBrowse link
G WNT3A Wnt family member 3A involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr25:1,664,316...1,675,006
Ensembl chr25:1,666,053...1,719,881
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830
JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr19:28,387,324...28,444,019
Ensembl chr19:28,385,422...28,441,350
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chr10:29,732,934...29,864,157
Ensembl chr10:29,729,305...29,864,205
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr 6:40,633,540...40,651,839
Ensembl chr 6:40,633,448...40,652,845
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chr 8:26,598,544...26,668,983
Ensembl chr 8:26,598,610...26,667,543
JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chr 8:98,154,173...98,187,864
Ensembl chr 8:98,154,196...98,188,069
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,217,402...45,222,996
Ensembl chr11:45,219,027...45,222,017
JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:85,955,517...86,005,664
Ensembl chr21:85,955,145...86,001,730
JBrowse link
G WNT3A Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chr25:1,664,316...1,675,006
Ensembl chr25:1,666,053...1,719,881
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chr20:74,727,084...75,968,434
Ensembl chr20:75,541,508...75,968,427
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:34211179)
(MGI:6742151|PMID:34211179)
UniProt PMID:34211179 MGI:6742151 NCBI chr14:52,266,197...52,487,111
Ensembl chr14:52,262,416...52,487,112
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCTN1 tectonic family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16357211) Ensembl
MGI
PMID:16357211 GO_REF:0000107 NCBI chr11:105,855,138...105,898,764
Ensembl chr11:105,855,288...105,891,093
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:37,742,550...37,769,022
Ensembl chr  X:37,742,545...37,769,062
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:136,757...153,316
Ensembl chr15:150,718...151,785
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in ISO (MGI:1352955|PMID:10655590) UniProt PMID:10655590 MGI:1352955 NCBI chr10:97,099,090...98,281,697 JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,217,402...45,222,996
Ensembl chr11:45,219,027...45,222,017
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995 NCBI chr12:1,161,340...1,183,807
Ensembl chr12:1,162,865...1,183,113
JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr 1:18,504,588...18,584,635
Ensembl chr 1:18,484,372...18,586,623
JBrowse link
G CNTN1 contactin 1 involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chr11:36,950,020...37,332,058
Ensembl chr11:37,167,079...37,333,314
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17952069) Ensembl
MGI
PMID:17952069 GO_REF:0000107 NCBI chr 6:38,804,296...38,823,229
Ensembl chr 6:38,801,423...38,823,073
JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chr 6:30,224,873...30,246,277
Ensembl chr 6:30,227,442...30,246,481
JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:50,591,080...50,639,869
Ensembl chr21:50,603,462...50,634,327
JBrowse link
G MOBP myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr22:1,041,714...1,077,514
Ensembl chr22:1,041,783...1,079,241
JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:69,864,570...70,450,485
Ensembl chr 1:69,869,359...70,110,710
JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr 7:100,239,533...100,565,955
Ensembl chr 7:100,258,441...100,260,795
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:25,704,441...25,721,789
Ensembl chr 8:25,703,257...25,721,789
JBrowse link
G FA2H fatty acid 2-hydroxylase acts_upstream_of_or_within ISO (PMID:21491498)
(PMID:18815260)
MGI PMID:18815260 PMID:21491498 NCBI chr 5:52,930,289...52,993,751
Ensembl chr 5:52,930,833...52,992,499
JBrowse link
G MYRF myelin regulatory factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:12,066,277...12,103,091 JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146
JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr16:2,980,325...3,005,632
Ensembl chr16:2,982,459...3,009,885
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:14,270,945...14,357,052
Ensembl chr 2:14,271,141...14,354,159
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,037,348...49,101,769
Ensembl chr18:49,037,225...49,102,502
JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chr25:24,262,092...24,296,740
Ensembl chr25:24,261,651...24,296,850
JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,590,043...63,606,805
Ensembl chr16:63,591,119...63,607,579
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chr21:114,741,918...116,988,691 JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chr13:41,670,416...41,755,549 JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr27:46,958,444...46,974,032
Ensembl chr27:46,957,254...46,973,392
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17006542) Ensembl
MGI
PMID:17006542 GO_REF:0000107 NCBI chr20:129,023,750...129,028,790
Ensembl chr20:129,027,370...129,028,065
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chr17:52,349,908...52,353,218
Ensembl chr17:52,348,388...52,353,281
JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17942730) Ensembl
MGI
PMID:17942730 GO_REF:0000107 NCBI chr20:3,873,915...3,907,587
Ensembl chr20:3,902,513...3,903,652
JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (MGI:1202048|PMID:9482783) UniProt PMID:9482783 MGI:1202048 NCBI chr 6:30,224,873...30,246,277
Ensembl chr 6:30,227,442...30,246,481
JBrowse link
G MAL mal, T cell differentiation protein acts_upstream_of ISO (PMID:15337780) MGI PMID:15337780 NCBI chr14:66,521...92,476
Ensembl chr14:66,610...93,588
JBrowse link
G MYRF myelin regulatory factor involved_in ISO (MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:19596243 PMID:24204311 PMID:27532821 MGI:3850982 MGI:5544144 MGI:5805298 NCBI chr 1:12,066,277...12,103,091 JBrowse link
G NCSTN nicastrin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27008863) Ensembl
MGI
PMID:27008863 GO_REF:0000107 NCBI chr20:3,590,044...3,606,205
Ensembl chr20:3,590,725...3,606,066
JBrowse link
G NKX6-2 NK6 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15601927) Ensembl
MGI
PMID:15601927 GO_REF:0000107 NCBI chr 9:125,374,441...125,377,565
Ensembl chr 9:125,376,268...125,377,482
JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1694232) Ensembl
TreeGrafter
MGI
PMID:1694232 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:91,671,535...91,687,693
Ensembl chr  X:91,671,878...91,687,878
JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in ISO (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chr19:20,673,053...20,685,506 JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chr22:2,731,174...3,398,885
Ensembl chr22:2,731,308...3,398,912
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP35 Rho GTPase activating protein 35 involved_in ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chr 6:40,264,466...40,353,157
Ensembl chr 6:40,205,892...40,353,280
JBrowse link
G ARHGEF28 Rho guanine nucleotide exchange factor 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15378065) Ensembl
MGI
PMID:15378065 GO_REF:0000107 NCBI chr 4:67,987,275...68,298,359
Ensembl chr 4:68,112,244...68,298,438
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:14,270,945...14,357,052
Ensembl chr 2:14,271,141...14,354,159
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,037,348...49,101,769
Ensembl chr18:49,037,225...49,102,502
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr20:9,245,803...9,255,430
Ensembl chr20:9,247,231...9,253,795
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15208636) Ensembl
MGI
PMID:15208636 GO_REF:0000107 NCBI chr16:7,797,858...7,831,211 JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chr16:54,638,548...55,144,372
Ensembl chr16:54,642,729...54,948,256
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chr 9:81,308,058...81,412,386
Ensembl chr 9:81,309,099...81,409,146
JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr 8:134,897,511...135,246,300 JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGBL4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chr20:82,893,087...84,293,578 JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chr12:96,342,193...96,534,981
Ensembl chr12:96,342,759...96,534,800
JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:15169849)
(PMID:16469766)
MGI PMID:15169849 PMID:16469766 NCBI chr11:98,182,213...98,185,057
Ensembl chr11:98,182,787...98,183,506
JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709
JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr12:20,189,270...20,387,494
Ensembl chr12:20,189,295...20,388,089
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:20020054) MGI PMID:20020054 NCBI chr25:26,032,404...26,036,500
Ensembl chr25:26,034,632...26,036,538
JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:8855328) MGI PMID:8855328 NCBI chr21:119,235,687...119,240,163 JBrowse link
G FGF8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr 9:94,797,157...94,803,725
Ensembl chr 9:94,798,088...94,803,629
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chr 8:36,426,116...36,485,683
Ensembl chr 8:36,427,110...36,485,508
JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr27:2,829,385...3,254,292
Ensembl chr27:2,832,450...3,217,326
JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:10357893) MGI PMID:10357893 NCBI chr22:52,549,112...52,562,911
Ensembl chr22:52,555,738...52,562,909
JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,852,048...44,865,542
Ensembl chr12:44,852,203...44,868,652
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:9886073) MGI PMID:9886073 NCBI chr  X:109,629,674...109,671,409 JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:109,630,112...109,664,985 JBrowse link
G LEP leptin acts_upstream_of_or_within ISO (PMID:10592285) MGI PMID:10592285 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chr26:5,485,059...5,690,531
Ensembl chr26:5,688,293...5,690,155
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chr12:11,443,253...11,526,789
Ensembl chr12:11,444,324...11,526,552
JBrowse link
G MAP2 microtubule associated protein 2 involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chr10:95,319,649...95,431,106
Ensembl chr10:95,349,157...95,431,320
JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chr 7:60,296,442...60,299,093
Ensembl chr 7:60,297,586...60,298,404
JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in ISO (MGI:5789071|PMID:27223325) UniProt PMID:27223325 MGI:5789071 NCBI chr 6:39,390,384...39,428,290
Ensembl chr 6:39,393,868...39,428,272
JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:34,068,533...34,076,205
Ensembl chr21:34,068,530...34,075,127
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:1343962|PMID:8402890) UniProt PMID:8402890 MGI:1343962 NCBI chr12:95,477,612...95,836,734
Ensembl chr12:95,479,447...95,620,364
JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:44,483,005...44,576,017
Ensembl chr24:44,483,199...44,573,172
JBrowse link
G TAOK1 TAO kinase 1 involved_in ISO (PMID:33565190)
(MGI:6707836|PMID:33565190)
UniProt PMID:33565190 MGI:6707836 NCBI chr16:23,145,629...23,291,694 JBrowse link
G TTC36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (PMID:31537781) MGI PMID:31537781 NCBI chr 1:109,912,976...109,917,097 JBrowse link
G TTC36 tetratricopeptide repeat domain 36 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:109,913,430...109,917,024 JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr24:77,122,591...77,222,562
Ensembl chr24:77,122,689...77,221,454
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chr 9:44,944,463...45,108,832
Ensembl chr 9:44,941,460...45,027,275
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:43,349,364...43,397,745 JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO (PMID:15469980) MGI PMID:15469980
G BRINP2 BMP/retinoic acid inducible neural specific 2 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr25:51,993,095...52,114,569
Ensembl chr25:51,993,135...52,105,212
JBrowse link
G BRINP3 BMP/retinoic acid inducible neural specific 3 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr25:38,950,219...39,340,920
Ensembl chr25:39,147,423...39,340,564
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chr 6:11,883,353...12,307,023 JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr21:31,272,410...31,275,503
Ensembl chr21:31,272,889...31,275,551
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17670789)
(PMID:15148302)
Ensembl
MGI
PMID:15148302 PMID:17670789 GO_REF:0000107 NCBI chr25:63,533,442...63,688,124
Ensembl chr25:63,640,244...63,686,106
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chr21:85,370,574...85,486,405
Ensembl chr21:85,397,645...85,488,093
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chr21:125,132,517...125,138,520
Ensembl chr21:125,133,194...125,138,217
JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:19592574) MGI PMID:19592574 NCBI chr 7:32,846,436...32,851,526
Ensembl chr 7:32,846,528...32,851,447
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11113533) Ensembl
TreeGrafter
MGI
PMID:11113533 GO_REF:0000107 GO_REF:0000118 NCBI chr10:41,715,092...41,724,411
Ensembl chr10:41,715,086...41,723,685
JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272)
(PMID:8876243)
MGI PMID:8876243 PMID:8955272 NCBI chr 3:57,667,248...57,673,071 JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571630) Ensembl
MGI
PMID:16571630 GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709
JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr11:23,298,622...24,131,712
Ensembl chr11:23,303,325...23,715,492
JBrowse link
G SPOCK1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chr23:39,676,750...40,192,565
Ensembl chr23:39,676,558...39,965,037
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chr20:85,681,247...85,697,887
Ensembl chr20:85,688,155...85,694,829
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr11:2,956,762...3,005,309
Ensembl chr11:2,956,895...3,006,735
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 8:60,476,555...60,483,693
Ensembl chr 8:60,480,825...60,481,976
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr20:9,245,803...9,255,430
Ensembl chr20:9,247,231...9,253,795
JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr 3:14,358,997...14,713,621
Ensembl chr 3:14,362,301...14,536,027
JBrowse link
G DCX doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr  X:99,106,291...99,220,479
Ensembl chr  X:99,120,505...99,220,237
JBrowse link
G EPHB1 EPH receptor B1 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chr15:55,144,178...55,592,252
Ensembl chr15:55,143,630...55,589,862
JBrowse link
G EPHB2 EPH receptor B2 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chr20:109,747,883...109,954,936
Ensembl chr20:109,746,925...109,890,777
JBrowse link
G EPHB3 EPH receptor B3 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chr15:4,831,980...4,852,586
Ensembl chr15:4,832,750...4,852,152
JBrowse link
G KIFBP kinesin family binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:62,305,387...62,336,165
Ensembl chr 9:62,305,368...62,336,103
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18031680) Ensembl
MGI
PMID:18031680 GO_REF:0000107 NCBI chr 3:56,128,691...56,412,854
Ensembl chr 3:56,128,428...56,412,923
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10585298) Ensembl
MGI
PMID:10585298 GO_REF:0000107 NCBI chr10:41,715,092...41,724,411
Ensembl chr10:41,715,086...41,723,685
JBrowse link
G PRDM8 PR/SET domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22284184) Ensembl
MGI
PMID:22284184 GO_REF:0000107 NCBI chr 7:28,610,166...28,631,712
Ensembl chr 7:28,626,265...28,629,707
JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17197442) Ensembl
TreeGrafter
MGI
PMID:17197442 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:34,926,413...35,036,611
Ensembl chr 6:34,930,519...35,035,719
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZIC2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr 3:78,631,556...78,637,422
Ensembl chr 3:78,631,530...78,636,548
JBrowse link
G ZIC3 Zic family member 3 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:8855328) MGI PMID:8855328 NCBI chr21:119,235,687...119,240,163 JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO (PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
UniProt PMID:24766809 PMID:24766810 MGI:5568133 NCBI chr 1:15,568,984...15,573,849
Ensembl chr 1:15,568,976...15,573,082
JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr 1:103,276,780...103,377,110
Ensembl chr 1:103,286,346...103,378,387
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20798045) Ensembl
MGI
PMID:20798045 GO_REF:0000107 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573
JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr12:33,872,165...33,964,105
Ensembl chr12:33,900,362...33,953,377
JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:28,789,952...28,856,713
Ensembl chr25:28,789,614...28,856,570
JBrowse link
G NAV2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chr 1:44,887,172...45,648,260
Ensembl chr 1:44,887,169...45,214,703
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,557,831...66,563,757
Ensembl chr16:66,560,957...66,562,105
JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:13,975,825...14,070,216
Ensembl chr21:13,973,845...14,070,731
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:10407039) MGI PMID:10407039 NCBI chr21:119,235,687...119,240,163 JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr26:17,059,122...17,168,787
Ensembl chr26:17,060,054...17,168,782
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr11:107,658,495...107,754,457
Ensembl chr11:107,658,453...107,752,637
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chr19:5,775,829...5,803,260
Ensembl chr19:5,773,225...5,785,422
JBrowse link
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr11:53,371,929...53,384,339
Ensembl chr11:53,375,558...53,385,269
JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr10:9,302,890...9,561,287
Ensembl chr10:9,304,645...9,369,115
JBrowse link
G LOC103238261 tubulin alpha-1A chain involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chr11:45,419,046...45,423,574
Ensembl chr11:45,418,748...45,423,685
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr 6:11,705,323...11,778,943
Ensembl chr 6:11,706,060...11,776,083
JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr 2:89,934,888...90,046,767
Ensembl chr 2:89,936,210...90,046,328
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709
JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chr20:105,767,563...105,775,350
Ensembl chr20:105,773,908...105,774,591
JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:38,255,414...38,402,855
Ensembl chr  X:38,256,008...38,403,323
Ensembl chr  Y:38,256,008...38,403,323
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr11:46,100,437...46,131,046
Ensembl chr11:46,099,895...46,131,155
JBrowse link
G MDK midkine involved_in ISO (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 1:18,945,355...18,948,394
Ensembl chr 1:18,946,378...18,947,134
JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr26:40,048,802...40,228,083
Ensembl chr26:40,048,943...40,231,228
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20153830) MGI
TreeGrafter
PMID:20153830 GO_REF:0000118 NCBI chr 1:590,581...593,599
Ensembl chr 1:591,585...592,043
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17409116) Ensembl
MGI
PMID:17409116 GO_REF:0000107 NCBI chr10:109,921,619...109,988,137
Ensembl chr10:109,921,598...109,987,513
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:28,789,952...28,856,713
Ensembl chr25:28,789,614...28,856,570
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr22:46,360,306...46,742,446
Ensembl chr22:46,368,243...46,662,220
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 5:35,068,087...35,075,215
Ensembl chr 5:35,071,051...35,075,159
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr 7:40,585,532...42,079,977 JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) MGI PMID:17984326
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr21:104,605,924...104,657,664
Ensembl chr21:104,605,592...104,657,866
JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:23042739)
(PMID:21800304)
MGI PMID:21800304 PMID:23042739 NCBI chr 6:11,705,323...11,778,943
Ensembl chr 6:11,706,060...11,776,083
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr14:56,051,849...57,202,334 JBrowse link
G OPHN1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr  X:57,906,868...58,291,358
Ensembl chr  X:57,911,555...58,290,900
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:15,533,546...15,592,834
Ensembl chr25:15,538,964...15,587,059
JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr16:65,761,391...65,792,041
Ensembl chr16:65,761,416...65,792,701
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9405095) Ensembl
MGI
PMID:9405095 GO_REF:0000107 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in ISO (MGI:5689090|PMID:22095825) UniProt PMID:22095825 MGI:5689090 NCBI chr 6:43,085,634...43,090,234
Ensembl chr 6:43,084,665...43,091,751
JBrowse link
G EGF epidermal growth factor acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 7:57,810,110...57,911,361
Ensembl chr 7:57,811,728...57,911,516
JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 7:70,089,394...70,157,423 JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr10:122,177,725...122,184,448
Ensembl chr10:122,182,301...122,184,446
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr11:97,624,498...97,708,730
Ensembl chr11:97,631,189...97,707,308
JBrowse link
G PSMG1 proteasome assembly chaperone 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20498273) Ensembl
MGI
PMID:20498273 GO_REF:0000107 NCBI chr 2:83,105,263...83,113,289
Ensembl chr 2:83,102,363...83,113,229
JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24466353) Ensembl
MGI
PMID:24466353 GO_REF:0000107 NCBI chr20:122,946,759...123,408,428
Ensembl chr20:123,109,364...123,408,631
JBrowse link
G RORA RAR related orphan receptor A involved_in ISO (MGI:2683830|PMID:14687547) UniProt PMID:14687547 MGI:2683830 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10027293) Ensembl
MGI
PMID:10027293 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395
JBrowse link
G ZNF423 zinc finger protein 423 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27727273) Ensembl
MGI
PMID:27727273 GO_REF:0000107 NCBI chr 5:35,281,679...35,657,045
Ensembl chr 5:35,278,652...35,621,956
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA2 plexin A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18327254) Ensembl
MGI
PMID:18327254 GO_REF:0000107 NCBI chr25:21,201,867...21,424,529
Ensembl chr25:21,202,014...21,419,521
JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr26:40,048,802...40,228,083
Ensembl chr26:40,048,943...40,231,228
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chr 6:11,883,353...12,307,023 JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr13:97,928,480...97,936,594
Ensembl chr13:97,928,634...97,936,589
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:68,872,683...68,900,911
Ensembl chr 9:68,871,827...68,900,724
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRK CRK proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19074029) Ensembl
MGI
PMID:19074029 GO_REF:0000107 NCBI chr16:1,102,485...1,135,225
Ensembl chr16:1,102,348...1,135,166
JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:128,285,128...128,309,173
Ensembl chr  X:128,285,130...128,299,570
JBrowse link
G LOC103222955 uncharacterized LOC103222955 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19074029) Ensembl
MGI
PMID:19074029 GO_REF:0000107 NCBI chr19:4,855,633...4,889,674
Ensembl chr19:4,855,611...4,890,302
JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr 9:111,823,590...111,825,389 JBrowse link
G SAMD4B sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr 6:33,949,045...33,990,410
Ensembl chr 6:33,963,231...33,988,246
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048)
(PMID:10630211)
(PMID:30420556)
UniProt
MGI
PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 MGI:2159417 MGI:3614720 MGI:4849873 NCBI chr12:96,342,193...96,534,981
Ensembl chr12:96,342,759...96,534,800
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr22:46,360,306...46,742,446
Ensembl chr22:46,368,243...46,662,220
JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709
JBrowse link
G ATXN2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chr11:106,704,532...106,860,450
Ensembl chr11:106,705,127...106,859,337
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7834360)
(PMID:1306163)
(PMID:10630211)
MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr 6:11,883,353...12,307,023 JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20153830) MGI
TreeGrafter
PMID:20153830 GO_REF:0000118 NCBI chr 1:590,581...593,599
Ensembl chr 1:591,585...592,043
JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chr11:46,100,437...46,131,046
Ensembl chr11:46,099,895...46,131,155
JBrowse link
G FOXP2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chr21:82,799,147...83,392,568
Ensembl chr21:83,129,308...83,389,483
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20041218) Ensembl
MGI
PMID:20041218 GO_REF:0000107 NCBI chr26:19,713,780...19,930,807
Ensembl chr26:19,713,617...19,930,937
JBrowse link
G LDB1 LIM domain binding 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chr 9:95,102,312...95,153,029
Ensembl chr 9:95,138,424...95,153,179
JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chr16:30,843,062...30,850,182
Ensembl chr16:30,842,652...30,849,465
JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chr11:108,718,452...108,727,156
Ensembl chr11:108,718,925...108,727,139
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chr 9:59,440,327...59,474,773
Ensembl chr 9:59,440,311...59,474,986
JBrowse link
G RORA RAR related orphan receptor A acts_upstream_of_or_within ISO (PMID:8996814) MGI PMID:8996814 NCBI chr26:22,263,889...23,002,224
Ensembl chr26:22,812,445...22,993,021
JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600)
(PMID:24491816)
MGI PMID:21937600 PMID:24491816 NCBI chr18:33,687,044...33,731,464
Ensembl chr18:33,687,057...33,716,606
JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr23:14,113,276...14,139,758
Ensembl chr23:14,113,375...14,136,424
JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr16:65,761,391...65,792,041
Ensembl chr16:65,761,416...65,792,701
JBrowse link
G TTC21B tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29615573) Ensembl
MGI
PMID:29615573 GO_REF:0000107 NCBI chr10:51,365,156...51,449,207
Ensembl chr10:51,364,889...51,449,183
JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within