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ONTOLOGY REPORT - ANNOTATIONS

Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544 		JBrowse link
G ADGRA2 adhesion G protein-coupled receptor A2 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:27,547,722...27,583,069
Ensembl chr16:27,549,308...27,583,070 		JBrowse link
G ALDH3A2 aldehyde dehydrogenase 3 family member A2 involved_in ISO (PMID:8528251) UniProt PMID:8528251 NCBI chr 5:40,515,768...40,641,377
Ensembl chr 5:40,515,030...40,641,463 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,560,005...22,590,996
Ensembl chr35:22,560,008...22,587,875 		JBrowse link
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:379,443...405,101
Ensembl chr26:379,346...403,474 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:116,774,392...116,783,101
Ensembl chr 1:116,728,529...116,783,046 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:4,704,155...4,786,011
Ensembl chr 5:4,705,491...4,786,079 		JBrowse link
G APP amyloid beta precursor protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,005,106...57,139,585
Ensembl chr 3:57,008,570...57,159,713 		JBrowse link
G B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO (PMID:11384981) UniProt PMID:11384981 NCBI chr34:16,208,518...16,228,592
Ensembl chr34:16,225,002...16,226,147 		JBrowse link
G BCAN brevican involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:41,313,578...41,330,178
Ensembl chr 7:41,313,579...41,330,178 		JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) MGI PMID:30735131 NCBI chr18:53,958,380...53,971,120
Ensembl chr18:53,958,475...53,971,119 		JBrowse link
G CAPG capping actin protein, gelsolin like involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:39,619,429...39,640,944
Ensembl chr17:39,619,248...39,640,942 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA
IBA 		Ensembl
UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:20,293,184...20,307,708
Ensembl chr 9:20,293,170...20,307,662 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:17067568) MGI
GO_Central		 PMID:17067568 GO_REF:0000033 NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:50,633,397...50,653,882
Ensembl chr17:50,633,413...50,653,894 		JBrowse link
G CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:7,416,022...7,424,173 JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047 		JBrowse link
G DCLK2 doublecortin like kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr15:48,119,227...48,365,807
Ensembl chr15:48,119,001...48,365,732 		JBrowse link
G DCX doublecortin involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G DHX30 DExH-box helicase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,102,064...41,131,464
Ensembl chr20:41,102,080...41,129,429 		JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,931,272...13,939,650
Ensembl chr15:13,934,530...13,953,408 		JBrowse link
G DNER delta/notch like EGF repeat containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:41,709,570...41,887,705
Ensembl chr25:41,710,420...42,019,885 		JBrowse link
G DSCAM DS cell adhesion molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr31:34,666,300...35,277,651
Ensembl chr31:34,669,424...35,400,160 		JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:15,839,504...16,187,465
Ensembl chr 5:15,826,726...16,186,880 		JBrowse link
G ECRG4 ECRG4 augurin precursor involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:37,423,183...37,432,961
Ensembl chr10:37,423,183...37,433,322 		JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:48,110,521...48,117,175
Ensembl chr 8:48,110,050...48,116,686 		JBrowse link
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma involved_in IEA UniProt GO_REF:0000117 NCBI chr15:15,337,421...15,481,427
Ensembl chr15:15,337,483...15,481,425 		JBrowse link
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta involved_in IEA UniProt GO_REF:0000117 NCBI chr17:21,321,329...21,326,357
Ensembl chr17:21,321,349...21,326,244 		JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,415,229...29,507,159
Ensembl chr25:29,415,924...29,507,098 		JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in IBA GO_Central GO_REF:0000033
G EMX2 empty spiracles homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G FKRP fukutin related protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:109,166,527...109,177,393
Ensembl chr 1:109,168,644...109,178,319 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:42,889,100...42,958,604
Ensembl chr13:42,897,655...42,959,206 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:52,264,959...52,277,298
Ensembl chr11:52,265,070...52,277,213 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GLIS2 GLIS family zinc finger 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:37,048,380...37,069,740
Ensembl chr 6:37,048,367...37,088,880 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496 		JBrowse link
G GSN gelsolin involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:23,999,148...24,077,935
Ensembl chr 3:23,998,545...24,074,580 		JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:41,340,493...41,346,607
Ensembl chr 7:41,341,883...41,344,117 		JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:43,932,364...43,940,438
Ensembl chr20:43,933,769...43,938,262 		JBrowse link
G HELT helt bHLH transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:45,564,986...45,567,225
Ensembl chr16:45,565,131...45,566,884 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:9398841) MGI
GO_Central		 PMID:9398841 GO_REF:0000033 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,880,659...75,881,786
Ensembl chr 2:75,880,657...75,882,010 		JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LOC100684983 cytochrome c oxidase subunit 7B, mitochondrial involved_in ISO (PMID:23122588) UniProt PMID:23122588 NCBI chr  X:60,192,698...60,197,547 JBrowse link
G LOC119869994 MARCKS-related protein-like involved_in IBA GO_Central GO_REF:0000033
G LOC119875993 MARCKS-related protein-like involved_in IBA GO_Central GO_REF:0000033
G LOC119879078 MARCKS-related protein involved_in IBA GO_Central GO_REF:0000033
G MARCKS myristoylated alanine rich protein kinase C substrate involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:69,980,003...69,987,150
Ensembl chr12:69,980,433...69,984,848 		JBrowse link
G MARCKSL1 MARCKS like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:68,898,750...68,901,139
Ensembl chr 2:68,892,492...68,901,031 		JBrowse link
G MIR124-1 microRNA mir-124-1 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr25:28,188,264...28,188,322
Ensembl chr25:28,188,250...28,188,334 		JBrowse link
G MIR124-2 microRNA mir-124-2 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr29:14,264,389...14,264,445 JBrowse link
G MIR124-3 microRNA mir-124-3 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr24:46,916,732...46,916,789
Ensembl chr24:46,916,720...46,916,800 		JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:19,509,038...19,514,378
Ensembl chr16:19,499,582...19,512,836 		JBrowse link
G MSI1 musashi RNA binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr26:16,266,302...16,288,980
Ensembl chr26:16,266,586...16,289,012 		JBrowse link
G MSI2 musashi RNA binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:32,017,951...32,409,457 JBrowse link
G MTF1 metal regulatory transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:4,679,945...4,723,111
Ensembl chr15:4,680,372...4,717,561 		JBrowse link
G NCAN neurocan involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:43,944,257...43,970,864
Ensembl chr20:43,945,143...43,970,886 		JBrowse link
G NDN necdin, MAGE family member acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:36,313,977...36,315,661
Ensembl chr 3:36,314,104...36,315,081 		JBrowse link
G NGFR nerve growth factor receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:25,598,468...25,621,021
Ensembl chr 9:25,601,074...25,623,274 		JBrowse link
G NHLH1 nescient helix-loop-helix 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr38:21,867,603...21,868,942 JBrowse link
G NHLH2 nescient helix-loop-helix 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795 		JBrowse link
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:12,264,063...12,477,247
Ensembl chr18:12,264,063...12,475,230 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:12652306)
(PMID:11731459) 		MGI PMID:11731459 PMID:12652306 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:1723950) UniProt PMID:1723950 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX6 paired box 6 involved_in IEA UniProt GO_REF:0000117
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:55,529,841...55,553,604
Ensembl chr20:55,524,443...55,553,525 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in
acts_upstream_of_or_within 		ISS
ISO 		(PMID:12091320) UniProt
MGI		 PMID:12091320 GO_REF:0000024 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:59,769,553...59,944,111
Ensembl chr14:59,827,650...59,943,315 		JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within 		IEA
IBA 		InterPro
Ensembl
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G RUNX1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO (PMID:16174759) MGI PMID:16174759 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839 		JBrowse link
G SCIN scinderin involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:27,429,476...27,477,805
Ensembl chr14:27,412,351...27,477,283 		JBrowse link
G SEMA6B semaphorin 6B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:55,151,913...55,173,434
Ensembl chr20:55,161,818...55,173,135 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within 		IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:463,307...493,145
Ensembl chr15:463,237...493,140 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr25:4,345,785...4,419,352
Ensembl chr25:4,345,771...4,778,047 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISO (PMID:9119111) UniProt PMID:9119111 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:55,429,989...55,571,917
Ensembl chr10:55,429,940...55,571,916 		JBrowse link
G STK3 serine/threonine kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:647,363...920,887
Ensembl chr13:648,216...920,847 		JBrowse link
G STK4 serine/threonine kinase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042 		JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:16,729,068...16,780,549
Ensembl chr15:16,728,758...16,780,325 		JBrowse link
G THOC6 THO complex subunit 6 involved_in ISO (PMID:23621916) UniProt PMID:23621916 NCBI chr 6:38,161,506...38,164,287
Ensembl chr 6:38,161,474...38,164,402 		JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chr28:13,807,428...13,813,875
Ensembl chr28:13,807,720...13,813,849 		JBrowse link
G TLX3 T cell leukemia homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:40,816,351...40,818,582
Ensembl chr 4:40,816,467...40,818,723 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chr 7:40,296,278...40,329,818
Ensembl chr 7:40,252,697...40,329,828 		JBrowse link
G TPP1 tripeptidyl peptidase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:29,921,764...29,926,974
Ensembl chr21:29,921,764...29,926,986 		JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033
G VCAN versican involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:24,127,293...24,238,859
Ensembl chr 3:24,119,181...24,239,192 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,101,226...1,834,933
Ensembl chr13:1,101,610...1,871,225 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:19,082,594...19,284,360
Ensembl chr 5:19,087,154...19,267,628 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
G ZIC1 Zic family member 1 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:11756505)
(PMID:9412507) 		MGI
GO_Central		 PMID:9412507 PMID:11756505 GO_REF:0000033
G ZIC2 Zic family member 2 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:11756505) MGI
GO_Central		 PMID:11756505 GO_REF:0000033 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055 		JBrowse link
G ZIC3 Zic family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
G ZIC4 Zic family member 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr23:42,509,742...42,527,918
Ensembl chr23:42,512,186...42,529,112 		JBrowse link
G ZIC5 Zic family member 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:49,929,198...49,938,002
Ensembl chr22:49,931,460...49,937,853 		JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G GHRH growth hormone releasing hormone acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712 		JBrowse link
G GHRHR growth hormone releasing hormone receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753 		JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:11,853,483...11,855,169
Ensembl chr25:11,853,462...11,855,445 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G POU1F1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chr31:769,454...788,761
Ensembl chr31:769,487...787,626 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chr11:2,739,958...2,742,576
Ensembl chr11:2,739,958...2,743,533 		JBrowse link
G SLC6A3 solute carrier family 6 member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:11,209,118...11,245,456
Ensembl chr34:11,210,939...11,246,742 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI		 PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr34:14,853,000...14,855,153 JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUOX2 dual oxidase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:11,521,833...11,541,719
Ensembl chr30:11,521,845...11,541,716 		JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARHL2 BarH like homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:57,971,077...57,977,197
Ensembl chr 6:57,971,018...57,977,211 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954
G FAT3 FAT atypical cadherin 3 acts_upstream_of_or_within ISO (PMID:21903076) MGI PMID:21903076 NCBI chr21:7,711,304...8,355,609
Ensembl chr21:7,711,995...8,213,266 		JBrowse link
G FOXN4 forkhead box N4 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:15363391) Ensembl
UniProt		 PMID:15363391 GO_REF:0000107 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602 		JBrowse link
G GDF11 growth differentiation factor 11 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768 		JBrowse link
G LOC119877796 homeobox protein TGIF1 acts_upstream_of IEA Ensembl GO_REF:0000107
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:11861467) UniProt PMID:11861467 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:384,809...396,731
Ensembl chr27:389,095...390,090 		JBrowse link
G PTF1A pancreas associated transcription factor 1a acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:17075007) Ensembl
UniProt		 PMID:17075007 GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302 		JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736 		JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605 NCBI chr 6:27,855,702...27,950,140
Ensembl chr 6:27,855,702...27,989,331 		JBrowse link
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:22,023,176...22,080,656
Ensembl chr38:22,023,221...22,080,604 		JBrowse link
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G ESR2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691 		JBrowse link
G MME membrane metalloendopeptidase acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605 NCBI chr23:48,966,222...49,059,919
Ensembl chr23:48,971,066...49,059,919 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416 		JBrowse link
G TBR1 T-box brain transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
G UBA6 ubiquitin like modifier activating enzyme 6 acts_upstream_of_or_within ISO (PMID:23499007) MGI PMID:23499007 NCBI chr13:58,148,935...58,231,194
Ensembl chr13:58,013,212...58,231,200 		JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PLXNA4 plexin A4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in 		ISO (PMID:21055390)
(PMID:23206892) 		MGI
UniProt		 PMID:21055390 PMID:23206892 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271 		JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598 		JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880 		JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G BACE2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr31:35,714,003...35,760,686
Ensembl chr31:35,713,149...35,760,681 		JBrowse link
G C1QA complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,668,086...76,671,082
Ensembl chr 2:76,668,217...76,670,977 		JBrowse link
G C5AR1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,659,637...108,704,217
Ensembl chr 1:108,659,637...108,675,401 		JBrowse link
G CNTF ciliary neurotrophic factor ISO spinal cord astrocytes RGD PMID:11771938 RGD:1626172 NCBI chr18:37,758,148...37,765,698 JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631 		JBrowse link
G FPR formyl peptide receptor involved_in ISO PMID:18723082 ARUK-UCL PMID:18723082 RGD:12910993 NCBI chr 1:105,343,096...105,353,563
Ensembl chr 1:105,344,463...105,372,070 		JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698 		JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in ISO (PMID:17255335) ARUK-UCL PMID:17255335 NCBI chr 1:29,646,776...29,669,669
Ensembl chr 1:29,647,552...29,669,578 		JBrowse link
G IL1B interleukin 1 beta acts_upstream_of_or_within ISO (PMID:28377412) MGI PMID:28377412 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458 		JBrowse link
G MT2A metallothionein 1H ISO RGD PMID:19837066 RGD:6483825 NCBI chr 2:59,607,926...59,608,825
Ensembl chr 2:59,607,927...59,626,727 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G GRN granulin precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,077,430...19,085,443
Ensembl chr 9:19,077,427...19,082,268 		JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chr10:1,260,256...1,341,705
Ensembl chr10:1,260,719...1,352,271 		JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23688253) UniProt PMID:23688253 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,038,163...17,047,390
Ensembl chr34:17,038,203...17,046,928 		JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461 		JBrowse link
G LAMB2 laminin subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523 		JBrowse link
G LAMC3 laminin subunit gamma 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:52,970,313...53,028,817
Ensembl chr 9:52,970,306...53,028,821 		JBrowse link
G PLP1 proteolipid protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:77,191,112...77,207,772
Ensembl chr  X:77,191,150...77,205,964 		JBrowse link
G ROR1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 5:46,010,097...46,477,882
Ensembl chr 5:46,013,195...46,190,880 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151 		JBrowse link
G S100A8 S100 calcium binding protein A8 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr 7:43,540,667...43,541,604
Ensembl chr 7:43,501,989...43,541,604 		JBrowse link
G S100A9 S100 calcium binding protein A9 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:22577135) MGI
GO_Central		 PMID:22577135 GO_REF:0000033 NCBI chr 7:43,566,993...43,570,074 JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165 		JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chr17:52,692,744...52,749,048
Ensembl chr17:52,694,603...52,744,276 		JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466 		JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217 		JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:92,489,981...92,538,199
Ensembl chr  X:92,491,114...92,537,672 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,038,163...17,047,390
Ensembl chr34:17,038,203...17,046,928 		JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G GAP43 growth associated protein 43 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr33:19,668,491...19,770,509
Ensembl chr33:19,656,835...19,770,408 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr 5:14,767,306...14,775,205
Ensembl chr 5:14,767,666...14,775,082 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chr26:23,400,226...23,418,538
Ensembl chr26:23,403,364...23,406,851 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:12,905,336...13,030,901
Ensembl chr19:12,982,394...13,020,083 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:11,720,857...11,724,308 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of ISO (PMID:11297510)
(PMID:10442636), (PMID:9878702) 		MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within 		ISO (PMID:29106906)
(PMID:21800304) 		MGI PMID:21800304 PMID:29106906 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:30186101) RGD
MGI
Ensembl		 PMID:22944581 PMID:30186101 GO_REF:0000107 RGD:8552357
G S100B S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chr31:39,783,990...39,788,289
Ensembl chr31:39,784,506...39,788,183 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SOX6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672 		JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,598,373...63,676,753
Ensembl chr10:63,599,229...63,676,747 		JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCM1 glial cells missing transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:20,623,593...20,642,861
Ensembl chr12:20,623,717...20,640,193 		JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638 		JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047 		JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 7:20,696,659...20,735,362
Ensembl chr 7:20,700,144...20,727,410 		JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:882,672...887,679
Ensembl chr 7:883,279...887,811 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425 		JBrowse link
G PLPP3 phospholipid phosphatase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:52,924,443...53,006,298
Ensembl chr 5:52,923,833...53,005,493 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466 		JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AATK apoptosis associated tyrosine kinase acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:22573681) MGI
GO_Central		 PMID:22573681 GO_REF:0000033 NCBI chr 9:911,461...923,508
Ensembl chr 9:910,633...923,542 		JBrowse link
G ABCB6 ATP binding cassette subfamily B member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,760,478...25,767,753
Ensembl chr37:25,760,477...25,769,841 		JBrowse link
G ABR ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chr 9:44,634,117...44,821,454
Ensembl chr 9:44,681,411...44,819,249 		JBrowse link
G ACHE acetylcholinesterase ISO RGD PMID:20147288 RGD:405855864 NCBI chr 6:8,874,747...8,879,926
Ensembl chr 6:8,873,584...8,879,702 		JBrowse link
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684 		JBrowse link
G AFG2A AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) UniProt PMID:26299366 NCBI chr19:17,020,337...17,371,396
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835) 		MGI PMID:18776131 PMID:21746835 NCBI chr 8:65,136,750...65,213,589
Ensembl chr 8:65,136,705...65,213,555 		JBrowse link
G ALK ALK receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:23,010,308...23,688,841
Ensembl chr17:23,010,308...23,688,841 		JBrowse link
G AMIGO1 adhesion molecule with Ig like domain 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:42,351,373...42,356,948
Ensembl chr 6:42,351,373...42,354,204 		JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr27:7,507,426...7,510,015
Ensembl chr27:7,507,489...7,509,054 		JBrowse link
G AMIGO3 adhesion molecule with Ig like domain 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:39,554,028...39,557,129
Ensembl chr20:39,554,629...39,556,155 		JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:8,223,627...8,247,976
Ensembl chr26:8,223,616...8,247,976 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:38,026,893...38,160,842
Ensembl chr15:38,028,132...38,114,987 		JBrowse link
G APOD apolipoprotein D involved_in IEA InterPro GO_REF:0000002 NCBI chr33:30,490,149...30,504,804
Ensembl chr33:30,488,135...30,509,289 		JBrowse link
G ARL6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr33:4,797,944...4,857,566
Ensembl chr33:4,800,917...4,839,635 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,005,106...57,139,585
Ensembl chr 3:57,008,570...57,159,713 		JBrowse link
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:5,591,530...5,663,673
Ensembl chr 7:5,590,957...5,660,919 		JBrowse link
G ATM ATM serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406 		JBrowse link
G ATXN1 ataxin 1 involved_in IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr35:15,458,498...15,863,829
Ensembl chr35:15,452,135...15,649,747 		JBrowse link
G ATXN1L ataxin 1 like involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:77,616,484...77,627,411
Ensembl chr 5:77,619,861...77,621,924 		JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:8,815,681...8,938,899
Ensembl chr25:8,817,628...8,939,249 		JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:16,272,051...16,281,028
Ensembl chr15:16,255,986...16,281,165 		JBrowse link
G BAG6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,126,730...1,141,978
Ensembl chr12:1,126,732...1,137,896 		JBrowse link
G BBS7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:18,280,487...18,319,128
Ensembl chr19:18,280,520...18,315,825 		JBrowse link
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:27,856,280...27,980,923
Ensembl chr26:27,856,082...27,978,318 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in
acts_upstream_of_or_within 		ISS
ISO 		(PMID:28851741) UniProt
UniProt		 PMID:28851741 GO_REF:0000024 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:10,818,232...10,828,473
Ensembl chr 2:10,818,232...10,833,613 		JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,586,107...12,703,296
Ensembl chr 9:12,590,333...12,703,422 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,625,011...72,794,641
Ensembl chr11:72,628,582...72,764,077 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657 		JBrowse link
G CCDC141 coiled-coil domain containing 141 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:22,437,363...22,626,200
Ensembl chr36:22,492,052...22,625,957 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:73,548,003...73,693,044
Ensembl chr11:73,548,038...73,690,199 		JBrowse link
G CERS1 ceramide synthase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:44,216,568...44,231,820 JBrowse link
G CFAP43 cilia and flagella associated protein 43 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:16,443,417...16,555,027
Ensembl chr28:16,443,389...16,555,792 		JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:18,430,601...18,492,564
Ensembl chr15:18,431,019...18,491,920 		JBrowse link
G CIC capicua transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,081,775...112,105,093
Ensembl chr 1:112,082,265...112,105,082 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,327,104...56,332,608
Ensembl chr  X:56,327,182...56,332,047 		JBrowse link
G CLN5 CLN5 intracellular trafficking protein involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr22:30,568,572...30,575,890
Ensembl chr22:30,568,572...30,575,890 		JBrowse link
G CNTN1 contactin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr27:12,655,021...13,005,536
Ensembl chr27:12,657,287...12,920,315 		JBrowse link
G CNTN3 contactin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:17,703,159...18,032,041
Ensembl chr20:17,702,492...18,030,345 		JBrowse link
G CNTN4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr20:14,354,148...15,277,202
Ensembl chr20:14,356,710...14,954,367 		JBrowse link
G CNTN5 contactin 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:1,127,965...2,408,282
Ensembl chr21:1,130,393...1,865,309 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:47,474,488...47,490,951
Ensembl chr 9:47,473,901...47,490,252 		JBrowse link
G CWH43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:44,724,127...44,782,788
Ensembl chr13:44,724,131...44,782,804 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740 		JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr 4:22,916,718...22,918,893
Ensembl chr 4:22,916,096...22,964,035 		JBrowse link
G DHX37 DEAH-box helicase 37 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:4,964,038...4,993,932
Ensembl chr26:4,964,088...4,993,930 		JBrowse link
G DIAPH1 diaphanous related formin 1 involved_in ISO (PMID:24781755) UniProt PMID:24781755 NCBI chr 2:36,483,781...36,581,390
Ensembl chr 2:36,485,571...36,581,320 		JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,931,272...13,939,650
Ensembl chr15:13,934,530...13,953,408 		JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr30:17,156,077...17,308,641
Ensembl chr30:17,156,791...17,308,803 		JBrowse link
G DNAAF3 dynein axonemal assembly factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:102,468,377...102,474,615
Ensembl chr 1:102,468,629...102,475,172 		JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,595,233...6,596,440
Ensembl chr 6:6,595,294...6,595,974 		JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,839,504...16,187,465
Ensembl chr 5:15,826,726...16,186,880 		JBrowse link
G EML1 EMAP like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,139,741...68,295,363
Ensembl chr 8:68,216,857...68,294,080 		JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G EOMES eomesodermin involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA
ISO 		Ensembl
RGD		 PMID:7731712 GO_REF:0000107 RGD:70732 NCBI chr12:52,134,775...52,305,163
Ensembl chr12:52,137,605...52,305,162 		JBrowse link
G EPOR erythropoietin receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:49,945,777...49,950,856
Ensembl chr20:49,945,777...49,950,856 		JBrowse link
G ESR2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO
IEA 		(PMID:14605369) MGI
Ensembl		 PMID:14605369 GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FKRP fukutin related protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:109,166,527...109,177,393
Ensembl chr 1:109,168,644...109,178,319 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,394,002...61,462,056
Ensembl chr11:61,405,034...61,461,396 		JBrowse link
G FLVCR2 FLVCR heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chr 8:48,588,294...48,640,339
Ensembl chr 8:48,587,863...48,653,488 		JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:9635428)
(PMID:4784576), (PMID:5500588) 		MGI PMID:4784576 PMID:5500588 PMID:9635428
G FOXG1 forkhead box G1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756 		JBrowse link
G FOXR1 forkhead box R1 involved_in ISO (PMID:34723967) UniProt PMID:34723967 NCBI chr 5:14,852,381...14,861,364
Ensembl chr 5:14,852,205...14,861,728 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764 		JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr 5:63,589,196...63,609,014
Ensembl chr 5:63,573,941...63,619,476 		JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA
IBA 		Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:43,676,707...43,686,566
Ensembl chr 9:43,677,899...43,693,177 		JBrowse link
G GIT2 GIT ArfGAP 2 involved_in IEA
IBA 		InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr26:17,170,651...17,217,634
Ensembl chr26:17,170,680...17,214,631 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,969,781...8,379,657
Ensembl chr 2:7,971,800...8,378,198 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601 		JBrowse link
G HMX2 H6 family homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:32,679,585...32,687,972
Ensembl chr28:32,679,579...32,687,982 		JBrowse link
G HMX3 H6 family homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:32,673,652...32,676,700
Ensembl chr28:32,674,213...32,675,232 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:19,975,935...19,999,077
Ensembl chr38:19,977,086...19,999,010 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10579729) MGI
UniProt		 PMID:10579729 GO_REF:0000117 NCBI chr 2:77,263,534...77,366,558
Ensembl chr 2:77,301,858...77,367,724 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:76,743,872...77,104,888
Ensembl chr 5:76,743,972...77,045,455 		JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) UniProt PMID:33122427 NCBI chr 7:44,309,459...44,326,253 JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983)
(PMID:22228099) 		MGI PMID:19036983 PMID:22228099 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G IGF1R insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387 		JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chr14:50,487,679...51,336,906 JBrowse link
G INTS15 integrator complex subunit 15 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:11,910,812...11,924,915
Ensembl chr 6:11,893,081...11,924,929 		JBrowse link
G IRS2 insulin receptor substrate 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:58,197,016...58,229,026
Ensembl chr22:58,223,387...58,227,535 		JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:11,382,105...11,443,219
Ensembl chr 5:11,384,434...11,443,185 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:39,928,347...39,936,753
Ensembl chr27:39,933,825...39,935,312 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chr24:47,060,527...47,089,077
Ensembl chr24:47,060,245...47,089,711 		JBrowse link
G KDM4B lysine demethylase 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,713,900...54,843,991
Ensembl chr20:54,634,121...54,820,816 		JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr 7:2,185,040...2,231,046
Ensembl chr 7:2,184,733...2,231,058 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:26306834), (PMID:29360985)
(PMID:29360985) 		MGI PMID:26306834 PMID:29360985 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G LOC100855552 creatine kinase B-type involved_in ISS AgBase GO_REF:0000024 NCBI chr 8:71,284,104...71,287,379 JBrowse link
G LOC119877704 gamma-tubulin complex component 2 involved_in IEA Ensembl GO_REF:0000107
G MACO1 macoilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,397,715...74,458,126
Ensembl chr 2:74,397,715...74,458,126 		JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:6,740,943...8,673,524
Ensembl chr24:6,744,744...8,673,275 		JBrowse link
G MACROH2A2 macroH2A.2 histone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,057,935...21,087,097
Ensembl chr 4:21,057,947...21,086,730 		JBrowse link
G MAGEE2 MAGE family member E2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:58,877,193...58,879,518
Ensembl chr  X:58,877,722...58,879,293 		JBrowse link
G MAP1S microtubule associated protein 1S involved_in ISO (PMID:15528209) HGNC-UCL PMID:15528209 NCBI chr20:45,147,720...45,162,431
Ensembl chr20:45,147,751...45,162,408 		JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:49,302,037...49,329,247
Ensembl chr20:49,302,162...49,329,837 		JBrowse link
G MATCAP1 microtubule associated tyrosine carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:82,182,737...82,190,590 JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G MED1 mediator complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MEIS1 Meis homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:65,765,498...65,898,714
Ensembl chr10:65,683,560...65,897,573 		JBrowse link
G MEIS2 Meis homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr30:4,422,451...4,627,277
Ensembl chr30:4,422,440...4,741,335 		JBrowse link
G MEIS3 Meis homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:108,591,759...108,602,635
Ensembl chr 1:108,591,589...108,604,040 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of
involved_in
acts_upstream_of_or_within 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968 		JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO (PMID:10708748) UniProt PMID:10708748 NCBI chr 5:31,707,975...31,718,013
Ensembl chr 5:31,708,553...31,749,842 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
G NAPA NSF attachment protein alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:108,510,920...108,533,317
Ensembl chr 1:108,510,931...108,532,881 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792 		JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within 		ISO (PMID:14765537)
(PMID:28916769) 		UniProt
MGI		 PMID:14765537 PMID:28916769 NCBI chr 4:61,613,580...61,727,219
Ensembl chr 4:61,613,589...61,727,205 		JBrowse link
G NEGR1 neuronal growth regulator 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:73,823,686...74,637,906
Ensembl chr 6:73,823,826...74,634,764 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196 		JBrowse link
G NFASC neurofascin involved_in IBA GO_Central GO_REF:0000033 NCBI chr38:1,367,128...1,546,909
Ensembl chr38:1,366,251...1,543,630 		JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270) 		MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467 		JBrowse link
G NNAT neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chr24:26,119,153...26,121,573
Ensembl chr24:26,118,991...26,120,906 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NOTCH2 notch receptor 2 ISO RGD PMID:1295745 RGD:69906 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NRG1 neuregulin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932 		JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chr27:39,383,017...39,454,613
Ensembl chr27:39,383,152...39,454,601 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:49,917,183...49,926,417
Ensembl chr20:49,917,350...49,926,424 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within ISO
IEA 		(PMID:27486780) MGI
Ensembl		 PMID:27486780 GO_REF:0000107 NCBI chr 9:20,897,814...20,921,182
Ensembl chr 9:20,897,976...20,921,441 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:41,230,230...41,330,017
Ensembl chr 8:41,275,947...41,327,348 		JBrowse link
G PAX4 paired box 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:8,714,251...8,719,387
Ensembl chr14:8,714,949...8,719,371 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107
G PBX1 PBX homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497 		JBrowse link
G PBX2 PBX homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:1,577,639...1,582,609
Ensembl chr12:1,578,707...1,584,688 		JBrowse link
G PBX3 PBX homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:57,198,531...57,429,820
Ensembl chr 9:57,199,812...57,429,811 		JBrowse link
G PBX4 PBX homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:43,653,532...43,687,874
Ensembl chr20:43,653,447...43,687,843 		JBrowse link
G PCDH18 protocadherin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,967,926...4,982,470
Ensembl chr19:4,967,925...4,982,468 		JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,949,230...16,975,109
Ensembl chr10:16,963,396...16,974,705 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:14,176,932...14,187,181
Ensembl chr15:14,178,357...14,187,161 		JBrowse link
G POMK protein O-mannose kinase acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr16:22,699,552...22,722,773
Ensembl chr16:22,701,736...22,719,229 		JBrowse link
G POU3F1 POU class 3 homeobox 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:4,547,868...4,549,469
Ensembl chr15:4,547,920...4,549,469 		JBrowse link
G POU3F2 POU class 3 homeobox 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:38,513,872...38,517,692
Ensembl chr10:38,513,013...38,514,684 		JBrowse link
G POU3F4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:64,427,161...64,428,825
Ensembl chr  X:64,427,325...64,428,410 		JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,815,428...2,886,474
Ensembl chr15:2,859,979...2,894,425 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481 		JBrowse link
G PYGO2 pygopus family PHD finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,509,760...42,513,744
Ensembl chr 7:42,509,968...42,512,091 		JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,077,856...40,085,100
Ensembl chr20:40,078,163...40,085,099 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501 		JBrowse link
G RAX retina and anterior neural fold homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:16,940,671...16,945,127
Ensembl chr 1:16,940,658...16,943,633 		JBrowse link
G RELN reelin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G ROGDI rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within 		IEA Ensembl GO_REF:0000107 NCBI chr 6:36,618,670...36,624,533
Ensembl chr 6:36,491,561...36,624,532 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G RTN1 reticulon 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:34,810,127...35,029,201
Ensembl chr 8:34,810,342...35,033,330 		JBrowse link
G RTN2 reticulon 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:109,976,820...110,080,252
Ensembl chr 1:109,976,930...110,048,532
Ensembl chr 1:109,976,930...110,048,532 		JBrowse link
G RTN3 reticulon 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:53,239,893...53,298,020
Ensembl chr18:53,239,914...53,297,984 		JBrowse link
G RTN4 reticulon 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574 		JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chr 6:48,897,320...48,902,206
Ensembl chr 6:48,897,449...48,900,037 		JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G SCT secretin involved_in IBA GO_Central GO_REF:0000033
G SCYL2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,365,702...39,429,979
Ensembl chr15:39,365,157...39,428,085 		JBrowse link
G SELENOP selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chr 4:66,953,060...66,964,162
Ensembl chr 4:66,956,405...66,959,043 		JBrowse link
G SEPTIN4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chr 9:33,138,167...33,162,212
Ensembl chr 9:33,138,165...33,157,996 		JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,224,107...17,246,527
Ensembl chr 6:17,224,694...17,245,870 		JBrowse link
G SHROOM4 shroom family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:43,366,921...43,639,525
Ensembl chr  X:43,369,472...43,639,302 		JBrowse link
G SIX3 SIX homeobox 3 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260 		JBrowse link
G SLC23A1 solute carrier family 23 member 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:34,694,064...34,708,498
Ensembl chr 2:34,698,838...34,708,412 		JBrowse link
G SLC6A17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,773,367...41,822,831
Ensembl chr 6:41,773,369...41,822,962 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048 		JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:14609955) Ensembl
HGNC-UCL		 PMID:14609955 GO_REF:0000107 NCBI chr  X:100,678,457...100,749,216
Ensembl chr  X:100,679,942...100,749,651 		JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,416,396...111,438,069
Ensembl chr 1:111,416,624...111,435,575 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IBA GO_Central GO_REF:0000033
G SOX12 SRY-box transcription factor 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr24:20,509,931...20,515,013
Ensembl chr24:20,513,567...20,514,532 		JBrowse link
G SOX14 SRY-box transcription factor 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr23:34,079,534...34,081,598
Ensembl chr23:34,080,037...34,080,759 		JBrowse link
G SOX15 SRY-box transcription factor 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:32,507,869...32,509,763
Ensembl chr 5:32,508,074...32,509,333 		JBrowse link
G SOX21 SRY-box transcription factor 21 involved_in IBA GO_Central GO_REF:0000033
G SOX3 SRY-box transcription factor 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:110,361,354...110,363,458
Ensembl chr  X:110,362,124...110,363,458 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr35:20,098,783...20,101,357
Ensembl chr35:20,099,773...20,101,154 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549 		JBrowse link
G SPHK1 sphingosine kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:4,311,698...4,314,773
Ensembl chr 9:4,311,683...4,314,483 		JBrowse link
G SPHK2 sphingosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:107,681,425...107,689,790
Ensembl chr 1:107,680,599...107,689,707 		JBrowse link
G STK36 serine/threonine kinase 36 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr37:25,273,237...25,297,794
Ensembl chr37:25,273,110...25,340,512 		JBrowse link
G STXBP3 syntaxin binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,947,639...42,998,297
Ensembl chr 6:42,948,236...43,053,027 		JBrowse link
G SVBP small vasohibin binding protein involved_in ISO (PMID:31363758), (PMID:35482892) UniProt PMID:31363758 PMID:35482892 NCBI chr15:551,514...558,528
Ensembl chr15:551,873...558,475 		JBrowse link
G TBC1D23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:6,883,199...6,939,788
Ensembl chr33:6,883,336...6,938,318 		JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
G TMX2 thioredoxin related transmembrane protein 2 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:38,480,976...38,490,424
Ensembl chr18:38,481,264...38,490,326 		JBrowse link
G TUBGCP2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) UniProt PMID:31630790 NCBI chr28:40,865,742...40,881,105
Ensembl chr28:40,865,748...40,881,119 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639 		JBrowse link
G UFC1 ubiquitin-fold modifier conjugating enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:21,319,039...21,339,524
Ensembl chr38:21,319,054...21,340,211 		JBrowse link
G UFM1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chr25:2,427,521...2,547,449
Ensembl chr25:2,386,609...2,547,311 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,532,366...63,598,362
Ensembl chr10:63,533,171...63,597,452 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
G UNC5C unc-5 netrin receptor C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:17,981,286...18,333,111
Ensembl chr32:17,987,464...18,333,602 		JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chr  X:91,835,845...91,851,755
Ensembl chr  X:91,836,727...91,851,640 		JBrowse link
G UTP3 UTP3 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:59,994,445...59,996,221
Ensembl chr13:59,994,716...59,996,146 		JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IBA GO_Central GO_REF:0000033
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:1,101,226...1,834,933
Ensembl chr13:1,101,610...1,871,225 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271 		JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107
G ZNF335 zinc finger protein 335 involved_in IEA
IBA 		Ensembl
UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr24:33,226,636...33,246,496
Ensembl chr24:33,226,688...33,245,901 		JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543 		JBrowse link
G AKT3 AKT serine/threonine kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:34,633,064...34,931,112
Ensembl chr 7:34,636,124...34,931,112 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G CDH2 cadherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034 		JBrowse link
G CTNNA2 catenin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,472,346...44,504,881
Ensembl chr17:43,472,923...44,557,766 		JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G FANCC FA complementation group C acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chr 1:71,388,931...71,678,019
Ensembl chr 1:71,487,601...71,678,506 		JBrowse link
G FANCD2 FA complementation group D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:8,240,270...8,297,269
Ensembl chr20:8,240,311...8,297,568 		JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:40,238,695...40,363,445
Ensembl chr 4:40,238,737...40,361,125 		JBrowse link
G FOXO3 forkhead box O3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G MAGEE2 MAGE family member E2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:58,877,193...58,879,518
Ensembl chr  X:58,877,722...58,879,293 		JBrowse link
G MIR124-1 microRNA mir-124-1 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr25:28,188,264...28,188,322
Ensembl chr25:28,188,250...28,188,334 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:8951055) DFLAT PMID:8951055 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:19208814) CACAO PMID:19208814 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SLC4A10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:7,106,897...7,392,275
Ensembl chr36:7,106,994...7,390,398 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736 		JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chr 4:72,699,672...72,864,260
Ensembl chr 4:72,699,938...72,864,266 		JBrowse link
G VPS51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,083,896...52,106,129
Ensembl chr18:52,083,884...52,106,046 		JBrowse link
G ZNF335 zinc finger protein 335 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:33,226,636...33,246,496
Ensembl chr24:33,226,688...33,245,901 		JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948 		JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107
G NEUROG2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 involved_in IBA
IEA 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000117 NCBI chr21:42,207,205...42,214,954
Ensembl chr21:42,208,346...42,212,415 		JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (PMID:17573818) UniProt PMID:17573818 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795 		JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592 		JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:28,242,190...28,356,218
Ensembl chr 6:28,225,677...28,357,180 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139 		JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G FABP7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chr 1:62,084,372...62,088,547
Ensembl chr 1:61,967,129...62,088,547 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NGF nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr17:52,900,647...52,901,607
Ensembl chr17:52,900,647...52,901,607 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135 		JBrowse link
G SIX3 SIX homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr 1:108,659,637...108,704,217
Ensembl chr 1:108,659,637...108,675,401 		JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr10:55,429,989...55,571,917
Ensembl chr10:55,429,940...55,571,916 		JBrowse link
G TIGD5 tigger transposable element derived 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr13:37,254,327...37,258,521
Ensembl chr13:37,254,327...37,256,279 		JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCTN1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:8,411,429...8,444,640
Ensembl chr26:8,407,105...8,437,027 		JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,050,588...35,073,633
Ensembl chr  X:35,050,606...35,073,067 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808 		JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within 		ISO PMID:12210128
(PMID:17060448) 		UniProt
ARUK-UCL		 PMID:12210128 PMID:17060448 RGD:631995 NCBI chr 9:48,610,906...48,630,932
Ensembl chr 9:48,613,996...48,629,857 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr18:42,673,432...42,780,320
Ensembl chr18:42,711,471...42,780,090 		JBrowse link
G CNTN1 contactin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:12,655,021...13,005,536
Ensembl chr27:12,657,287...12,920,315 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125 		JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386 		JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:23,171,028...23,208,055
Ensembl chr14:23,171,050...23,555,257 		JBrowse link
G MOBP myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr23:9,121,277...9,176,128
Ensembl chr23:9,121,319...9,161,972 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305 		JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241 		JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,982,811...29,999,565
Ensembl chr25:29,982,811...29,999,563 		JBrowse link
G FA2H fatty acid 2-hydroxylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:75,878,539...75,923,886
Ensembl chr 5:75,878,243...75,948,094 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:18082964) CACAO PMID:18082964 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr 9:47,338,435...47,361,974
Ensembl chr 9:47,343,120...47,360,914 		JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621 		JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,293,184...20,307,708
Ensembl chr 9:20,293,170...20,307,662 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G GPM6B glycoprotein M6B involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:10,214,889...10,375,151
Ensembl chr  X:10,214,933...10,374,837 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chr38:22,114,718...22,143,625
Ensembl chr38:22,130,508...22,140,813 		JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:9482783) UniProt PMID:9482783 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386 		JBrowse link
G MAL mal, T cell differentiation protein acts_upstream_of ISO (PMID:15337780) MGI PMID:15337780 NCBI chr17:34,977,298...35,000,690
Ensembl chr17:34,977,298...35,001,349 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085 		JBrowse link
G NCSTN nicastrin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097 		JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:40,568,948...40,570,240
Ensembl chr28:40,569,093...40,570,793 		JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:77,191,112...77,207,772
Ensembl chr  X:77,191,150...77,205,964 		JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,680,441...26,690,530
Ensembl chr10:26,681,122...26,689,882 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP35 Rho GTPase activating protein 35 involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337 		JBrowse link
G ARHGEF28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:56,427,601...56,700,880
Ensembl chr 2:56,464,994...56,700,864 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360 		JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:33,187,614...33,244,483
Ensembl chr 5:33,204,452...33,266,052 		JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr13:35,302,439...35,541,336
Ensembl chr13:35,303,380...35,541,294 		JBrowse link
G SPAST spastin involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:25,393,169...25,447,686
Ensembl chr17:25,393,422...25,446,539 		JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGBL4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chr15:11,056,440...12,435,428
Ensembl chr15:11,056,447...12,435,448 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,625,011...72,794,641
Ensembl chr11:72,628,582...72,764,077 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:20020054) MGI PMID:20020054 NCBI chr38:70,921...75,149
Ensembl chr38:70,452...72,976 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G FGF8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FOXG1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:16680166) MGI PMID:16680166 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr13:43,011,491...43,349,876
Ensembl chr13:42,992,569...43,349,923 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,264,959...52,277,298
Ensembl chr11:52,265,070...52,277,213 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:9886073) MGI PMID:9886073 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702 		JBrowse link
G KIAA0319 KIAA0319 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:22,589,103...22,689,549
Ensembl chr35:22,591,353...22,652,292 		JBrowse link
G LEP leptin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395 		JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chr30:38,668,199...38,738,178
Ensembl chr30:38,721,394...38,737,464 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G MAP2 microtubule associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:17,316,899...17,611,360
Ensembl chr37:17,466,678...17,607,803 		JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915 		JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,657,693...109,683,277
Ensembl chr 1:109,659,184...109,682,902 		JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,824,579...37,831,289
Ensembl chr14:37,823,861...37,831,443 		JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:8809809) MGI PMID:8809809 NCBI chr27:39,383,017...39,454,613
Ensembl chr27:39,383,152...39,454,601 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:41,230,230...41,330,017
Ensembl chr 8:41,275,947...41,327,348 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:43,501,752...43,660,077
Ensembl chr 9:43,559,708...43,651,377 		JBrowse link
G TTC36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:15,207,400...15,211,905
Ensembl chr 5:15,207,403...15,211,853 		JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APBB1 amyloid beta precursor protein binding family B member 1 acts_upstream_of ISO (PMID:18278038) MGI PMID:18278038 NCBI chr21:29,719,386...29,741,658
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
G APP amyloid beta precursor protein acts_upstream_of ISO (PMID:18278038) MGI PMID:18278038 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406 		JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444 		JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:72,625,011...72,794,641
Ensembl chr11:72,628,582...72,764,077 		JBrowse link
G BRINP2 BMP/retinoic acid inducible neural specific 2 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:22,332,465...22,449,295
Ensembl chr 7:22,339,056...22,448,854 		JBrowse link
G BRINP3 BMP/retinoic acid inducible neural specific 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr38:8,181,227...8,558,518
Ensembl chr38:8,205,916...8,558,482 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:102,367,050...102,384,942
Ensembl chr 1:102,367,581...102,385,466 		JBrowse link
G BRSK2 BR serine/threonine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:45,666,489...45,688,950
Ensembl chr18:45,628,970...45,689,494 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G CDON cell adhesion associated, oncogene regulated acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO (PMID:21552265) MGI PMID:21552265 NCBI chr 5:28,566,604...28,727,416
Ensembl chr 5:28,388,664...28,727,334 		JBrowse link
G EFNA1 ephrin A1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,373,197...42,381,161
Ensembl chr 7:42,373,639...42,378,946 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,358,100...18,365,827 JBrowse link
G EPHA2 EPH receptor A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of ISO (PMID:20431123) MGI PMID:20431123
G FEZF2 FEZ family zinc finger 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G FOXG1 forkhead box G1 acts_upstream_of ISO (PMID:7605629)
(PMID:14704420) 		MGI PMID:7605629 PMID:14704420 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107
G HES5 hes family bHLH transcription factor 5 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of
acts_upstream_of_or_within 		ISO
IEA 		(PMID:15148302) MGI
Ensembl		 PMID:15148302 GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:15229182) MGI PMID:15229182 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027 		JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491 		JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chr16:19,509,038...19,514,378
Ensembl chr16:19,499,582...19,512,836 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO
IEA 		(PMID:19592574) MGI
Ensembl		 PMID:19592574 GO_REF:0000107 NCBI chr32:8,256,513...8,263,238
Ensembl chr32:8,256,254...8,262,004 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G PTF1A pancreas associated transcription factor 1a acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G RUNX1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO (PMID:15240886) MGI PMID:15240886 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of ISO (PMID:18024993) MGI PMID:18024993 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr27:22,857,661...23,855,709
Ensembl chr27:23,452,985...23,851,380 		JBrowse link
G SPOCK1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (PMID:10640720) UniProt PMID:10640720 NCBI chr11:24,733,290...25,013,400
Ensembl chr11:24,733,603...25,007,376 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:47,455,337...47,473,786
Ensembl chr 8:47,455,340...47,473,684 		JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr13:21,231,985...21,393,756
Ensembl chr13:21,377,316...21,379,832 		JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550) 		MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G EPHB1 EPH receptor B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393 		JBrowse link
G EPHB2 EPH receptor B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G EPHB3 EPH receptor B3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954 		JBrowse link
G KIFBP kinesin family binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:20,139,442...20,178,615
Ensembl chr 4:20,139,480...20,178,045 		JBrowse link
G MYCBP2 MYC binding protein 2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:17901218) Ensembl
UniProt		 PMID:17901218 GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780 		JBrowse link
G PRDM8 PR/SET domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:4,435,693...4,451,500
Ensembl chr32:4,443,289...4,451,036 		JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within ISO (PMID:17197442) MGI PMID:17197442 NCBI chr 1:113,167,251...113,243,071
Ensembl chr 1:113,168,484...113,240,934 		JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZIC2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr18:38,528,700...38,531,899
Ensembl chr18:38,528,621...38,530,846 		JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:20798045) MGI PMID:20798045 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,394,002...61,462,056
Ensembl chr11:61,405,034...61,461,396 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
G NAV2 neuron navigator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:41,458,280...42,181,227
Ensembl chr21:41,458,984...42,177,813 		JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,864,708...22,869,044
Ensembl chr 9:22,866,212...22,867,360 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008 		JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484 		JBrowse link
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G LOC106559920 TMF1 regulated nuclear protein 1 involved_in ISO (PMID:23622239) UniProt PMID:23622239 NCBI chr17:62,290,748...62,309,870 JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chr37:25,811,491...25,818,838 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:73,168,298...73,172,692 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:35,522,873...35,676,086 JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G LOC491316 midkine involved_in ISO (PMID:10096022) DFLAT PMID:10096022 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:17409116) MGI PMID:17409116 NCBI chr37:29,699,551...29,750,151
Ensembl chr37:29,700,024...29,724,228 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179 		JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:20537373) BHF-UCL PMID:20537373 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656 		JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:40,757,950...40,790,603 JBrowse link
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr16:12,316,487...12,369,148
Ensembl chr16:12,316,336...12,369,387 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within
involved_in 		ISO (PMID:21800304)
(PMID:23042739) 		MGI PMID:21800304 PMID:23042739 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:20537373) BHF-UCL PMID:20537373 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569 		JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:52,418,390...52,983,155
Ensembl chr  X:52,455,373...52,982,244 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) MGI PMID:9405095 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502 		JBrowse link
G EGF epidermal growth factor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G PSMG1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO (PMID:20498273) MGI PMID:20498273 NCBI chr31:33,914,640...33,925,925
Ensembl chr31:33,914,668...33,925,883 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of
involved_in 		IEA
ISO 		(PMID:22095825)
(PMID:14687547) 		Ensembl
UniProt		 PMID:14687547 PMID:22095825 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G ZNF423 zinc finger protein 423 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:65,512,342...65,778,410
Ensembl chr 2:65,438,842...65,778,407 		JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA2 plexin A2 acts_upstream_of_or_within ISO (PMID:18327254) MGI PMID:18327254 NCBI chr 7:6,863,518...7,049,301
Ensembl chr 7:6,863,663...7,049,250 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23688253) UniProt PMID:23688253 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chr 9:45,594,657...45,627,499
Ensembl chr 9:45,598,899...45,627,589 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:121,708,695...121,722,819
Ensembl chr  X:121,708,894...121,733,365 		JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:29,285,422...29,287,236 JBrowse link
G SAMD4B sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr 1:113,828,432...113,857,336
Ensembl chr 1:113,828,447...113,857,314 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G ATXN2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chr26:9,073,667...9,188,429
Ensembl chr26:9,073,809...9,188,414 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163)
(PMID:10630211)
(PMID:7834360) 		MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444 		JBrowse link
G LDB1 LIM domain binding 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548 		JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chr 4:22,571,095...22,603,880
Ensembl chr 4:22,572,153...22,603,848 		JBrowse link
G RORA RAR related orphan receptor A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600)
(PMID:24491816) 		MGI PMID:21937600 PMID:24491816 NCBI chr 7:44,250,822...44,289,737 JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr 3:1,700,310...1,715,841
Ensembl chr 3:1,702,905...1,756,025 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:22,456,150...22,492,375
Ensembl chr10:22,456,146...22,488,505 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:76,288,780...76,343,262
Ensembl chr 5:76,288,782...76,343,207 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205)
(PMID:20577052) 		MGI PMID:16625205 PMID:20577052 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:16,272,051...16,281,028
Ensembl chr15:16,255,986...16,281,165 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257 		JBrowse link
G KLHL1 kelch like family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:24,190,862...24,554,451
Ensembl chr22:24,191,778...24,555,120 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G SEZ6 seizure related 6 homolog acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:43,120,316...43,165,929
Ensembl chr 9:43,121,017...43,165,762 		JBrowse link
G SEZ6L seizure related 6 homolog like acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:16814779) MGI
UniProt		 PMID:16814779 GO_REF:0000117 NCBI chr26:19,889,913...20,079,305
Ensembl chr26:19,888,319...20,076,021 		JBrowse link
G SEZ6L2 seizure related 6 homolog like 2 acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:17,920,413...17,938,382
Ensembl chr 6:17,921,311...17,945,738 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,617,383...68,699,824
Ensembl chr11:68,617,377...68,699,977 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARCN1 archain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:15,141,861...15,171,642
Ensembl chr 5:15,143,499...15,171,586 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G COQ8B coenzyme Q8B involved_in ISO (PMID:27499294) UniProt PMID:27499294 NCBI chr 1:113,056,369...113,075,773
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:50,631,053...50,670,428
Ensembl chr18:50,631,909...50,669,916 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:23688253) UniProt PMID:23688253 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chr 6:33,385,779...33,471,348
Ensembl chr 6:33,376,996...33,471,326 		JBrowse link
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chr12:1,104,350...1,106,179
Ensembl chr12:1,104,394...1,106,177 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132 		JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chr27:7,507,426...7,510,015
Ensembl chr27:7,507,489...7,509,054 		JBrowse link
G ARHGAP32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chr 5:5,398,833...5,690,041
Ensembl chr 5:5,380,831...5,686,840 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:16880690) MGI PMID:16880690 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATRN attractin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:17,698,238...17,859,810
Ensembl chr24:17,702,282...17,859,737 		JBrowse link
G CCN3 cellular communication network factor 3 ISO RGD PMID:19286457 RGD:2306292 NCBI chr13:18,507,586...18,515,755
Ensembl chr13:18,507,580...18,514,619 		JBrowse link
G CCR1 chemokine (C-C motif) receptor 1 ISO RGD PMID:12541321 RGD:5688179 NCBI chr20:42,421,356...42,427,177
Ensembl chr20:42,421,356...42,426,958 		JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex involved_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chr 5:15,403,724...15,415,259
Ensembl chr 5:15,403,710...15,415,260 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A ISO RGD PMID:9693786 RGD:8552681 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:25,782,012...25,783,897 JBrowse link
G CNTN1 contactin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:12,655,021...13,005,536
Ensembl chr27:12,657,287...12,920,315 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:71,435,994...71,567,567
Ensembl chr 4:71,430,575...71,567,267 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chr14:43,366,849...43,414,398
Ensembl chr14:43,368,340...43,415,142 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:16329132 RGD:1599699 NCBI chr30:37,474,997...37,487,028
Ensembl chr30:37,473,901...37,487,507 		JBrowse link
G EN1 engrailed homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:16542644 RGD:1601098 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917 		JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb involved_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chr38:20,980,777...20,994,403 JBrowse link
G FOXC1 forkhead box C1 involved_in ISO (PMID:19668217) UniProt PMID:19668217
G FOXP2 forkhead box P2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GDF10 growth differentiation factor 10 ISO RGD PMID:8605043 RGD:631791 NCBI chr 4:35,008,204...35,017,476
Ensembl chr 4:35,008,983...35,018,166 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO RGD PMID:7182074 RGD:10047093 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GPX4 glutathione peroxidase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HAP1 huntingtin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,065,770...21,074,462
Ensembl chr 9:21,065,846...21,072,991 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:19115409 RGD:10041070 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9764759 RGD:10059383 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21443795 PMID:23397157 RGD:10403039 RGD:12904969 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387 		JBrowse link
G INSR insulin receptor ISO RGD PMID:23397157 RGD:10403039 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chr21:40,273,366...40,315,189
Ensembl chr21:40,273,827...40,315,189 		JBrowse link
G LDB1 LIM domain binding 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548 		JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LOC100855552 creatine kinase B-type ISO RGD PMID:12093362 RGD:625711 NCBI chr 8:71,284,104...71,287,379 JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:10,282,452...10,283,479 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 ISO RGD PMID:7057182 RGD:2301991 NCBI chr31:29,032,399...29,063,706 JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr11:65,690,806...65,822,166
Ensembl chr11:65,692,973...65,822,312 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) RGD
MGI		 PMID:14751287 PMID:18571096 RGD:12743658 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G MT-CO1 mitochondrially encoded cytochrome c oxidase I ISO RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,349...6,893
Ensembl chr MT:5,349...6,893 		JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 ISO RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,201...11,578
Ensembl chr MT:10,201...11,578 		JBrowse link
G MYO16 myosin XVI involved_in ISO PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr22:57,313,714...57,794,415
Ensembl chr22:57,198,283...57,648,949 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:10803578 PMID:15876152 RGD:2293531 RGD:5688232 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:10803578 RGD:2293531 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NCSTN nicastrin ISO RGD PMID:16298244 RGD:13801190 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:10398678) RGD
UniProt		 PMID:10398678 PMID:12242038 RGD:1625048 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (PMID:20393820) UniProt PMID:20393820 NCBI chr20:5,041,656...5,139,859
Ensembl chr20:5,052,232...5,133,721 		JBrowse link
G NTM neurotrimin ISO RGD PMID:12373100 RGD:2314481 NCBI chr 5:2,725,902...3,658,635
Ensembl chr 5:2,725,943...3,658,311 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISO RGD PMID:20395366 RGD:11533946 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11688562 RGD:8552644
G PDSS2 decaprenyl diphosphate synthase subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:64,371,548...64,620,652
Ensembl chr12:64,338,950...64,620,367 		JBrowse link
G PFDN1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chr 2:35,454,139...35,519,818
Ensembl chr 2:35,454,404...35,519,725 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:38,339,720...38,342,900
Ensembl chr27:38,341,011...38,343,572 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15763176 RGD:7777107 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:16298244 RGD:13801190 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:9917071 RGD:10045971 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8653419 RGD:10043831 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560 		JBrowse link
G SDF4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:56,407,506...56,421,515
Ensembl chr 5:56,407,807...56,421,430 		JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592 		JBrowse link
G SSTR1 somatostatin receptor 1 ISO RGD PMID:9166718 RGD:2325007 NCBI chr 8:16,571,069...16,575,730 JBrowse link
G SSTR2 somatostatin receptor 2 ISO RGD PMID:9166718 RGD:2325007 NCBI chr 9:6,989,488...7,004,851
Ensembl chr 9:6,996,874...7,000,778 		JBrowse link
G SSTR3 somatostatin receptor 3 ISO RGD PMID:9166718 RGD:2325007 NCBI chr10:27,324,067...27,332,570
Ensembl chr10:27,329,174...27,330,451 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 7:35,123,417...35,130,349
Ensembl chr 7:35,117,209...35,129,134 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:11344116) MGI PMID:11344116 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 7:20,696,659...20,735,362
Ensembl chr 7:20,700,144...20,727,410 		JBrowse link
G CBS cystathionine beta-synthase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:37,230,900...37,247,170 JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:11456442) MGI PMID:11456442 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:8,155,186...8,190,403
Ensembl chr 4:8,155,191...8,190,229 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17166916) MGI PMID:17166916 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr 7:44,250,822...44,289,737 JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:9338785) MGI PMID:9338785 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD4 frizzled class receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923 		JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15249135) MGI PMID:15249135 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G EFHC1 EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,068,287...20,131,621
Ensembl chr12:20,067,881...20,131,619 		JBrowse link
G EGFR epidermal growth factor receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631 		JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (PMID:22726441) UniProt PMID:22726441 NCBI chr  X:108,658,113...109,156,096
Ensembl chr  X:108,658,941...109,156,594 		JBrowse link
G HTR6 5-hydroxytryptamine receptor 6 involved_in ISO (PMID:25078650) UniProt PMID:25078650 NCBI chr 2:79,022,790...79,033,975
Ensembl chr 2:79,022,775...79,033,975 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270) MGI PMID:16920270 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G PEX13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:61,113,213...61,130,157
Ensembl chr10:61,123,655...61,193,241 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:37,843,218...37,860,664
Ensembl chr27:37,809,717...37,860,376 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G RHOA ras homolog family member A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215 		JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543 		JBrowse link
G AHSG alpha 2-HS glycoprotein ISO RGD PMID:2423927 RGD:1626077 NCBI chr34:19,221,034...19,228,866
Ensembl chr34:19,221,107...19,228,716 		JBrowse link
G AKIRIN2 akirin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,113,856...47,132,800
Ensembl chr12:47,113,857...47,132,555 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:5,591,530...5,663,673
Ensembl chr 7:5,590,957...5,660,919 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205) MGI PMID:16625205 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406 		JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:23527305) RGD
MGI		 PMID:19362129 PMID:23527305 RGD:11576282 NCBI chr 1:112,325,988...112,346,056
Ensembl chr 1:112,325,289...112,346,916 		JBrowse link
G BAD BCL2 associated agonist of cell death ISO RGD PMID:9813151 RGD:2315711 NCBI chr18:52,781,335...52,791,789
Ensembl chr18:52,781,921...52,791,405 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:9813151 GO_REF:0000107 RGD:2315711 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G BCL2 BCL2 apoptosis regulator ISO RGD PMID:9813151 RGD:2315711 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G BCL2A1 BCL2 related protein A1 ISO RGD PMID:9813151 RGD:2315711 NCBI chr 3:57,451,512...57,463,692
Ensembl chr 3:57,424,555...57,463,692 		JBrowse link
G BCL2L1 BCL2 like 1 ISO RGD PMID:9813151 RGD:2315711 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355 		JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:16765336 RGD:11561980 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797 		JBrowse link
G BTBD3 BTB domain containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr24:10,478,635...10,512,773
Ensembl chr24:10,479,900...10,512,185 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:22473424 RGD:10411906 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429 		JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO RGD PMID:10749215 RGD:11576295 NCBI chr  X:35,939,117...36,296,438
Ensembl chr  X:35,940,647...36,297,014 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340 		JBrowse link
G CCDC85C coiled-coil domain containing 85C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:67,930,372...68,006,689
Ensembl chr 8:67,929,555...68,004,891 		JBrowse link
G CDH2 cadherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDON cell adhesion associated, oncogene regulated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:42,105,316...42,199,017
Ensembl chr18:42,105,324...42,179,161 		JBrowse link
G CEP120 centrosomal protein 120 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:13,184,590...13,306,975
Ensembl chr11:13,143,672...13,266,151 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:21768377) UniProt PMID:21768377 NCBI chr36:30,488,250...30,526,367
Ensembl chr36:30,488,488...30,536,765 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chr 9:45,594,657...45,627,499
Ensembl chr 9:45,598,899...45,627,589 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:12801913 RGD:634609 NCBI chr24:3,294,607...3,310,846
Ensembl chr24:3,294,616...3,310,702 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 ISO RGD PMID:7735332 RGD:11565823 NCBI chr24:20,333,593...20,390,341 JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 ISO RGD PMID:7735332 RGD:11565823 NCBI chr 2:58,361,328...58,441,701
Ensembl chr 2:58,360,838...58,432,371 		JBrowse link
G DAB1 DAB adaptor protein 1 ISO RGD PMID:20368265 RGD:2324624 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DCC DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:21,788,833...22,494,849
Ensembl chr 1:21,793,328...22,494,967 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18997113) MGI PMID:18997113 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547 		JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 ISO RGD PMID:14597197 RGD:152975667 NCBI chr 5:32,165,399...32,175,600
Ensembl chr 5:32,163,594...32,188,126 		JBrowse link
G DMD dystrophin ISO RGD PMID:1454857 RGD:12880362 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in ISO (PMID:19506035) UniProt PMID:19506035 NCBI chr19:15,157,595...15,332,821
Ensembl chr19:15,158,922...15,332,045 		JBrowse link
G FILIP1 filamin A interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:36,939,378...37,146,607
Ensembl chr12:36,942,790...37,166,589 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,394,002...61,462,056
Ensembl chr11:61,405,034...61,461,396 		JBrowse link
G FLNA filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:122,058,303...122,083,467
Ensembl chr  X:122,061,455...122,083,203 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:32385110 RGD:405649740 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467 		JBrowse link
G FOXG1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G GNG12 G protein subunit gamma 12 ISO RGD PMID:9003074 RGD:2314446 NCBI chr 6:77,316,649...77,378,356
Ensembl chr 6:77,338,685...77,374,937 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr 4:55,801,269...56,103,383
Ensembl chr 4:55,803,296...56,103,669 		JBrowse link
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:14597197 RGD:152975667 NCBI chr15:54,634,332...54,710,711
Ensembl chr15:54,634,335...54,708,184 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12657691)
(PMID:10963597) 		MGI PMID:10963597 PMID:12657691 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19409459 RGD:2325985 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19409459 RGD:2325985 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680 		JBrowse link
G GRIP1 glutamate receptor interacting protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr10:8,801,023...9,187,684
Ensembl chr10:8,802,529...9,063,848 		JBrowse link
G H2AX H2A.X variant histone ISO RGD PMID:3622934 RGD:8693731 NCBI chr 5:14,765,625...14,766,590
Ensembl chr 5:14,766,126...14,766,557 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:18054780 PMID:22102872 RGD:10002783 RGD:10041004 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr27:39,928,347...39,936,753
Ensembl chr27:39,933,825...39,935,312 		JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:41,405,453...41,415,727
Ensembl chr 6:41,407,070...41,408,823 		JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:41,743,214...41,764,572
Ensembl chr 6:41,738,653...41,764,578 		JBrowse link
G KDM1A lysine demethylase 1A ISO RGD PMID:20164337 RGD:9588288 NCBI chr 2:76,313,742...76,375,716
Ensembl chr 2:76,156,434...76,375,632 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
G KIF26A kinesin family member 26A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:71,789,024...71,827,794
Ensembl chr 8:71,788,821...71,827,804 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:1,637,007...1,666,790
Ensembl chr10:1,636,932...1,664,767 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:26371318), (PMID:28053041) Ensembl
UniProt		 PMID:26371318 PMID:28053041 GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G LOC102155262 neuroblastoma breakpoint family member 11-like involved_in ISO (PMID:29561261), (PMID:29856954) UniProt PMID:29561261 PMID:29856954 NCBI chr17:57,512,565...57,526,747 JBrowse link
G LOC478702 tubulin beta-2B chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:3,494,982...3,498,274
Ensembl chr35:3,495,277...3,498,248 		JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 ISO RGD PMID:7057182 RGD:2301991 NCBI chr31:29,032,399...29,063,706 JBrowse link
G LOC491316 midkine involved_in ISO (PMID:10096022) DFLAT PMID:10096022 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:31386652)
(PMID:22101068) 		MGI PMID:22101068 PMID:31386652 NCBI chr37:25,811,491...25,818,838 JBrowse link
G LRP1 LDL receptor related protein 1 ISO RGD PMID:8930375 RGD:10046019 NCBI chr10:1,260,256...1,341,705
Ensembl chr10:1,260,719...1,352,271 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270) MGI PMID:16920270 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G LRP8 LDL receptor related protein 8 ISO RGD PMID:20368265 RGD:2324624 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736 		JBrowse link
G MCPH1 microcephalin 1 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr16:58,306,761...58,529,090
Ensembl chr16:58,295,280...58,529,433 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MGARP mitochondria localized glutamic acid rich protein involved_in ISO (PMID:24323429) UniProt PMID:24323429 NCBI chr19:3,411,718...3,423,589
Ensembl chr19:3,411,778...3,423,330 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740 		JBrowse link
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,320,941...18,338,185
Ensembl chr 1:18,321,021...18,337,430 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NDE1 nudE neurodevelopment protein 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 6:28,143,244...28,186,069
Ensembl chr 6:28,143,244...28,186,051 		JBrowse link
G NEFH neurofilament heavy chain ISO RGD PMID:10439464 RGD:9743942 NCBI chr26:22,726,523...22,735,129
Ensembl chr26:22,726,526...22,735,125 		JBrowse link
G NEFL neurofilament light chain ISO RGD PMID:10439464 RGD:9743942 NCBI chr25:32,463,361...32,468,965
Ensembl chr25:32,463,452...32,467,224 		JBrowse link
G NEFM neurofilament medium chain ISO RGD PMID:10439464 RGD:9743942 NCBI chr25:32,493,517...32,498,615
Ensembl chr25:32,493,675...32,498,570 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:11297510) MGI PMID:11297510 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394) MGI PMID:18477394 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,824,579...37,831,289
Ensembl chr14:37,823,861...37,831,443 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 ISO RGD PMID:21056632 RGD:124713572 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780 		JBrowse link
G NSUN5 NOP2/Sun RNA methyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,887,941...6,899,515
Ensembl chr 6:6,888,005...6,899,517 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:41,230,230...41,330,017
Ensembl chr 8:41,275,947...41,327,348 		JBrowse link
G PAX5 paired box 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:53,194,905...53,390,204
Ensembl chr11:53,201,344...53,390,974 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107
G PHACTR1 phosphatase and actin regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:12,233,152...12,745,031
Ensembl chr35:12,491,067...12,741,754 		JBrowse link
G PLCB1 phospholipase C beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:13,337,285...13,996,218
Ensembl chr24:13,322,296...13,995,539 		JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chr 9:26,135,982...26,152,303
Ensembl chr 9:26,137,464...26,151,810 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G RELN reelin acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:10436054 GO_REF:0000107 RGD:634730 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr36:10,472,496...10,605,055
Ensembl chr36:10,472,361...10,602,685 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:16581179 RGD:12879481 NCBI chr15:463,307...493,145
Ensembl chr15:463,237...493,140 		JBrowse link
G SLC2A3 solute carrier family 2 member 3 ISO RGD PMID:16581179 RGD:12879481 NCBI chr27:37,297,932...37,309,604
Ensembl chr27:37,297,932...37,428,410 		JBrowse link
G SLC38A2 solute carrier family 38 member 2 ISO RGD PMID:21718781 RGD:9999217 NCBI chr27:8,056,289...8,068,988
Ensembl chr27:8,018,880...8,066,331 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:17920017) MGI
GO_Central		 PMID:17920017 GO_REF:0000033 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G TACC2 transforming acidic coiled-coil containing protein 2 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:17920017) MGI
GO_Central		 PMID:17920017 GO_REF:0000033 NCBI chr28:31,735,673...31,943,184
Ensembl chr28:31,735,792...31,942,927 		JBrowse link
G TACC3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:17920017) MGI
GO_Central		 PMID:17920017 GO_REF:0000033 NCBI chr 3:62,368,641...62,380,898
Ensembl chr 3:62,368,642...62,381,024 		JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in ISO
IEA 		RGD
Ensembl		 PMID:10749215 GO_REF:0000107 RGD:11576295 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:21295554 RGD:5128671 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
G TRAPPC9 trafficking protein particle complex subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,579,134...35,115,508
Ensembl chr13:34,579,126...35,115,494 		JBrowse link
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677 		JBrowse link
G TUBB2A tubulin beta 2A class IIa involved_in ISO (PMID:31386652) MGI PMID:31386652 NCBI chr35:3,448,402...3,450,783
Ensembl chr35:3,448,435...3,452,091 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) MGI PMID:34235142 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:20368265 RGD:2324624 NCBI chr 1:91,242,010...91,277,030
Ensembl chr 1:91,241,509...91,272,495 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271 		JBrowse link
G WDR62 WD repeat domain 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:116,594,243...116,641,206
Ensembl chr 1:116,594,244...116,641,191 		JBrowse link
G XAB2 XPA binding protein 2 ISO RGD PMID:12801913 RGD:634609 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997 		JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon acts_upstream_of_or_within ISO (PMID:12796778) MGI PMID:12796778 NCBI chr 9:45,506,830...45,562,081
Ensembl chr 9:45,507,282...45,562,086 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 7:35,123,417...35,130,349
Ensembl chr 7:35,117,209...35,129,134 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr25:30,117,384...30,137,223
Ensembl chr25:30,117,239...30,135,599 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RAC3 Rac family small GTPase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:293,260...295,990 JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:15028753) MGI PMID:15028753 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17409246) MGI PMID:17409246 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C31H21orf91 chromosome 31 C21orf91 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:14,225,807...14,254,801
Ensembl chr31:14,230,000...14,254,756 		JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 involved_in ISO (PMID:23948251) UniProt PMID:23948251 NCBI chr 5:60,022,451...60,080,663
Ensembl chr 5:60,025,602...60,081,148 		JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:10,885,161...10,977,383
Ensembl chr15:10,887,347...11,027,621 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G EOMES eomesodermin involved_in ISO (PMID:18940588) UniProt PMID:18940588 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO (PMID:22951639) MGI PMID:22951639 NCBI chr21:23,070,875...23,157,078
Ensembl chr21:23,070,964...23,156,532 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:11297820) MGI PMID:11297820 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702 		JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:52,418,390...52,983,155
Ensembl chr  X:52,455,373...52,982,244 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO RGD PMID:16144905 RGD:1601501 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:37,843,218...37,860,664
Ensembl chr27:37,809,717...37,860,376 		JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:38,231,844...38,306,665
Ensembl chr30:38,232,680...38,382,635 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:9,542,471...9,841,759
Ensembl chr29:9,544,561...9,842,034 		JBrowse link
G ZNF335 zinc finger protein 335 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:33,226,636...33,246,496
Ensembl chr24:33,226,688...33,245,901 		JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G P2RY12 purinergic receptor P2Y12 involved_in ISO PMID:17299767
PMID:18183622 		ARUK-UCL PMID:17299767 PMID:18183622 RGD:13673751 RGD:13673786 NCBI chr23:45,908,574...45,954,675
Ensembl chr23:45,909,485...45,910,526 		JBrowse link
G RTN4 reticulon 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271 		JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC141 coiled-coil domain containing 141 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:22,437,363...22,626,200
Ensembl chr36:22,492,052...22,625,957 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 5:24,393,692...24,477,595
Ensembl chr 5:24,396,823...24,488,043 		JBrowse link
G DAB1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:9338784)
(PMID:9338785)
(PMID:24210661) 		RGD
UniProt
MGI		 PMID:9338784 PMID:9338785 PMID:18160654 PMID:24210661 RGD:2324689 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G FUT10 fucosyltransferase 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:31,186,333...31,265,463
Ensembl chr16:31,186,418...31,264,963 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,187,614...33,244,483
Ensembl chr 5:33,204,452...33,266,052 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU3F3 POU class 3 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:38,513,872...38,517,692
Ensembl chr10:38,513,013...38,514,684 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:17409253) MGI PMID:17409253 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr23:37,578,222...37,584,862
Ensembl chr23:37,578,273...37,584,523 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:23431145) MGI PMID:23431145
G DMRTA2 DMRT like family A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:10,706,096...10,710,506 JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G EOMES eomesodermin involved_in
acts_upstream_of_or_within 		ISO (PMID:30186101)
(PMID:23431145) 		MGI PMID:23431145 PMID:30186101 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 acts_upstream_of_or_within ISO (PMID:17828260) MGI PMID:17828260 NCBI chr 3:15,707,198...15,716,875
Ensembl chr 3:15,707,640...15,716,875 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:30186101) Ensembl
MGI		 PMID:30186101 GO_REF:0000107
G TRA2B transformer 2 beta homolog acts_upstream_of_or_within ISO (PMID:24586484) MGI PMID:24586484 NCBI chr34:18,637,725...18,656,869
Ensembl chr34:18,638,325...18,657,862 		JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G RELN reelin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G SLIT3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr 4:42,506,680...43,099,053
Ensembl chr 4:42,508,426...43,094,714 		JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRG1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:22376909) MGI PMID:22376909 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932 		JBrowse link
G NRG3 neuregulin 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:30,515,845...31,557,598
Ensembl chr 4:30,515,890...31,556,152 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541 		JBrowse link
commissural neuron differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA
IBA 		UniProt
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387 		JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:22473424 RGD:10411906 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CORO1C coronin 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:18,161,707...18,236,654
Ensembl chr26:18,176,441...18,236,652 		JBrowse link
G DCC DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:21,788,833...22,494,849
Ensembl chr 1:21,793,328...22,494,967 		JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr30:17,156,077...17,308,641
Ensembl chr30:17,156,791...17,308,803 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954 		JBrowse link
G FILIP1 filamin A interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:36,939,378...37,146,607
Ensembl chr12:36,942,790...37,166,589 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr27:39,928,347...39,936,753
Ensembl chr27:39,933,825...39,935,312 		JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:41,405,453...41,415,727
Ensembl chr 6:41,407,070...41,408,823 		JBrowse link
G KCNA3 potassium voltage-gated channel subfamily A member 3 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:41,343,613...41,363,076 JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr21:40,273,366...40,315,189
Ensembl chr21:40,273,827...40,315,189 		JBrowse link
G KCNC3 potassium voltage-gated channel subfamily C member 3 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:106,366,657...106,371,062 JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:41,743,214...41,764,572
Ensembl chr 6:41,738,653...41,764,578 		JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr 7:2,185,040...2,231,046
Ensembl chr 7:2,184,733...2,231,058 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr11:65,690,806...65,822,166
Ensembl chr11:65,692,973...65,822,312 		JBrowse link
G NSUN5 NOP2/Sun RNA methyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,887,941...6,899,515
Ensembl chr 6:6,888,005...6,899,517 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G RTN4R reticulon 4 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:29,109,991...29,117,319
Ensembl chr26:29,113,428...29,115,918 		JBrowse link
G RTN4RL1 reticulon 4 receptor like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,061,619...46,133,970
Ensembl chr 9:46,063,391...46,133,445 		JBrowse link
G RTN4RL2 reticulon 4 receptor like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,681,742...38,696,661
Ensembl chr18:38,689,025...38,690,234 		JBrowse link
G RYK receptor like tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr36:10,472,496...10,605,055
Ensembl chr36:10,472,361...10,602,685 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:24284070) MGI PMID:24284070 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
G WDR37 WD repeat domain 37 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:33,865,534...33,912,119
Ensembl chr 2:33,682,418...33,923,843 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271 		JBrowse link
G WDR89 WD repeat domain 89 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:38,121,649...38,157,178
Ensembl chr 8:38,121,798...38,122,961 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184
G C27H12orf57 chromosome 27 C12orf57 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,101,705...38,103,553
Ensembl chr27:38,101,786...38,127,910
Ensembl chr27:38,101,786...38,127,910 		JBrowse link
G NIN ninein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:27,100,740...27,199,269
Ensembl chr 8:27,104,262...27,189,463 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PRDM8 PR/SET domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:4,435,693...4,451,500
Ensembl chr32:4,443,289...4,451,036 		JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,729,068...16,780,549
Ensembl chr15:16,728,758...16,780,325 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within ISO (PMID:21055390) MGI PMID:21055390 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCN1B sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:117,504,428...117,510,666
Ensembl chr 1:117,503,828...117,511,727 		JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184
G CDH11 cadherin 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:83,977,267...84,122,712
Ensembl chr 5:84,038,317...84,122,110 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189 		JBrowse link
G NIN ninein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:27,100,740...27,199,269
Ensembl chr 8:27,104,262...27,189,463 		JBrowse link
G PRDM8 PR/SET domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:4,435,693...4,451,500
Ensembl chr32:4,443,289...4,451,036 		JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:11,233,709...11,305,454
Ensembl chr30:11,233,718...11,305,485 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
corticotropin hormone secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:9463347) MGI PMID:9463347 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAT1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within ISO (PMID:23720746) MGI PMID:23720746 NCBI chr12:441,847...456,349
Ensembl chr12:441,895...456,152 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:30498428) MGI PMID:30498428 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:20020054) MGI PMID:20020054 NCBI chr38:70,921...75,149
Ensembl chr38:70,452...72,976 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:33450391 RGD:126781687 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G FBXO41 F-box protein 41 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:49,585,511...49,613,406
Ensembl chr17:49,599,488...49,609,166 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:14,129,978...14,192,016
Ensembl chr34:14,130,017...14,191,370 		JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in ISO (PMID:21658585) UniProt PMID:21658585 NCBI chr 5:32,510,830...32,525,680
Ensembl chr 5:32,511,338...32,525,683 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:16464983) MGI PMID:16464983 NCBI chr24:47,060,527...47,089,077
Ensembl chr24:47,060,245...47,089,711 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:18297065) MGI PMID:18297065 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:21970971) MGI PMID:21970971 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LOC491316 midkine involved_in ISO (PMID:10096022) DFLAT PMID:10096022 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:21041996) MGI PMID:21041996 NCBI chr37:25,811,491...25,818,838 JBrowse link
G MEF2C myocyte enhancer factor 2C ISO RGD PMID:18949272 RGD:5131610 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:10804213)
(PMID:10398678), (PMID:10639171) 		MGI
UniProt		 PMID:10398678 PMID:10639171 PMID:10804213 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NEUROD6 neuronal differentiation 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:43,913,351...43,916,818
Ensembl chr14:43,914,149...43,915,162 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:38,339,720...38,342,900
Ensembl chr27:38,341,011...38,343,572 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:14,176,932...14,187,181
Ensembl chr15:14,178,357...14,187,161 		JBrowse link
G POMT2 protein O-mannosyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:50,091,861...50,133,388
Ensembl chr 8:50,091,865...50,133,442 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:17706614) CACAO PMID:17706614 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G RELN reelin ISO RGD PMID:15459104 RGD:2317799 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 acts_upstream_of_or_within ISO (PMID:16464983) MGI PMID:16464983 NCBI chr36:10,472,496...10,605,055
Ensembl chr36:10,472,361...10,602,685 		JBrowse link
G SCT secretin acts_upstream_of_or_within ISO (PMID:21159798) MGI PMID:21159798
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G TMEM108 transmembrane protein 108 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:29,992,038...30,331,791
Ensembl chr23:29,992,021...30,396,840 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:1,101,226...1,834,933
Ensembl chr13:1,101,610...1,871,225 		JBrowse link
diencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEMA5A semaphorin 5A involved_in ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
diencephalon morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chr34:14,853,000...14,855,153 JBrowse link
dorsal spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,686,653...8,801,903
Ensembl chr12:8,748,655...8,799,059 		JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA
IBA 		UniProt
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387 		JBrowse link
G DRGX dorsal root ganglia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:1,281,868...1,316,624
Ensembl chr28:1,281,864...1,314,932 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
G HOXB8 homeobox B8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,874,893...24,888,981
Ensembl chr 9:24,874,899...24,877,504 		JBrowse link
G PBX3 PBX homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:57,198,531...57,429,820
Ensembl chr 9:57,199,812...57,429,811 		JBrowse link
G UNCX UNC homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:15,652,600...15,657,016
Ensembl chr 6:15,653,576...15,657,927 		JBrowse link
efferent axon development in a lateral line nerve term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:17409253) MGI PMID:17409253 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:22049154 RGD:8657330 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727 		JBrowse link
G ADGRG6 adhesion G protein-coupled receptor G6 involved_in ISO (PMID:39087467) UniProt PMID:39087467 NCBI chr 1:33,967,783...34,106,950
Ensembl chr 1:33,969,268...34,104,228 		JBrowse link
G BPGM bisphosphoglycerate mutase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:13,386,021...13,418,248
Ensembl chr16:13,365,566...13,418,432 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G FZD4 frizzled class receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:25083995) MGI PMID:25083995 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G LSR lipolysis stimulated lipoprotein receptor involved_in IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:117,319,672...117,333,426
Ensembl chr 1:117,319,658...117,333,419 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
NOT|involved_in 		IEA
ISO 		(PMID:27008858) Ensembl
ARUK-UCL		 PMID:27008858 GO_REF:0000107 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:23217714)
(PMID:30478038) 		MGI PMID:23217714 PMID:30478038 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (PMID:30478038) MGI PMID:30478038 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,534,229...6,535,237 JBrowse link
G FOXP3 forkhead box P3 ISO RGD PMID:31027862 RGD:38549575 NCBI chr  X:42,331,229...42,362,841
Ensembl chr  X:42,344,108...42,350,758 		JBrowse link
establishment of glial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMD dystrophin acts_upstream_of_or_within ISO (PMID:12673830) MGI PMID:12673830 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576 		JBrowse link
G MXRA8 matrix remodeling associated 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,522,283...56,526,750
Ensembl chr 5:56,522,470...56,526,668 		JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,506,617...2,741,866 JBrowse link
facial nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor ISO RGD PMID:15356205 RGD:1580344 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
facial nerve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADARB1 adenosine deaminase RNA specific B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:38,715,529...38,799,353
Ensembl chr31:38,678,184...38,796,521 		JBrowse link
G PLXNA4 plexin A4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
facial nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:9806922) Ensembl
MGI		 PMID:9806922 GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614 		JBrowse link
G NRP1 neuropilin 1 involved_in ISO (PMID:18356247), (PMID:18804103) ParkinsonsUK-UCL PMID:18356247 PMID:18804103 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,293,545...14,408,984
Ensembl chr37:14,293,614...14,406,949 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:18804103) ParkinsonsUK-UCL PMID:18804103 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,135,580...39,165,381
Ensembl chr20:39,136,523...39,161,325 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800) MGI PMID:8102800 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZDHHC16 zinc finger DHHC-type palmitoyltransferase 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr28:10,739,043...10,749,121
Ensembl chr28:10,743,285...10,749,074 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr 1:97,623,126...97,662,668
Ensembl chr 1:97,622,998...97,662,662 		JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16971467) MGI PMID:16971467
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
forebrain astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KRAS KRAS proto-oncogene, GTPase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:22,261,753...22,296,704
Ensembl chr27:22,257,941...22,293,369 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:15944386) MGI PMID:15944386 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:57,103,712...57,108,522 JBrowse link
forebrain cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXL AXL receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:8,571,230...8,602,655
Ensembl chr30:8,571,475...8,598,721 		JBrowse link
forebrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:38,026,893...38,160,842
Ensembl chr15:38,028,132...38,114,987 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:116,774,392...116,783,101
Ensembl chr 1:116,728,529...116,783,046 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15689559)
(PMID:15385965) 		MGI PMID:15385965 PMID:15689559 NCBI chr 5:4,704,155...4,786,011
Ensembl chr 5:4,705,491...4,786,079 		JBrowse link
G APP amyloid beta precursor protein acts_upstream_of_or_within ISO (PMID:10200318)
(PMID:8001115)
(PMID:15385965) 		MGI PMID:8001115 PMID:10200318 PMID:15385965 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337 		JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G ATRX ATRX chromatin remodeler acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:59,772,067...60,107,016
Ensembl chr  X:59,774,585...60,106,980 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G CCKAR cholecystokinin A receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:84,010,700...84,019,066
Ensembl chr 3:84,010,205...84,021,293 		JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO RGD PMID:16516309 RGD:4890442 NCBI chr20:42,293,288...42,297,952
Ensembl chr20:42,294,996...42,297,952 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CHRD chordin involved_in
acts_upstream_of_or_within 		ISO (PMID:12397106)
(PMID:10688202) 		MGI PMID:10688202 PMID:12397106 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase ISO RGD PMID:16876328 RGD:6483359 NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079 		JBrowse link
G COQ8B coenzyme Q8B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:113,056,369...113,075,773
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387639) MGI PMID:16387639 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:17127040) MGI PMID:17127040 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr16:36,531,754...36,943,033
Ensembl chr16:36,531,754...36,943,033 		JBrowse link
G DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 ISO RGD PMID:9878698 RGD:10059325 NCBI chr20:48,120,604...48,131,091
Ensembl chr20:48,121,379...48,130,060 		JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA
IBA 		UniProt
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:17175142 RGD:2311572 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO (PMID:16229832) MGI PMID:16229832 NCBI chr 5:28,566,604...28,727,416
Ensembl chr 5:28,388,664...28,727,334 		JBrowse link
G E2F1 E2F transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:22,895,149...22,904,689
Ensembl chr24:22,878,402...22,904,656 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16540508) MGI PMID:16540508
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:15708559) MGI PMID:15708559 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G FOXG1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:12151532), (PMID:14566948), (PMID:7605629)
(PMID:14704420) 		MGI PMID:7605629 PMID:12151532 PMID:14566948 PMID:14704420 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:18561326 RGD:11561932 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397 		JBrowse link
G FOXP2 forkhead box P2 ISO RGD PMID:12815709 RGD:11536004 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:68,105,060...68,316,630
Ensembl chr12:68,075,184...68,316,541 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GNAO1 G protein subunit alpha o1 ISO RGD PMID:8746812 RGD:2302010 NCBI chr 2:59,805,675...59,980,782
Ensembl chr 2:59,806,689...59,980,398 		JBrowse link
G GSC goosecoid homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:63,684,149...63,707,030
Ensembl chr 8:63,684,137...63,707,054 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:10804184), (PMID:11291863)
(PMID:15459110) 		MGI PMID:10804184 PMID:11291863 PMID:15459110 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9878698 RGD:10059325 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797 		JBrowse link
G HTRA2 HtrA serine peptidase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:48,610,408...48,613,399
Ensembl chr17:48,610,408...48,613,399 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:28291836) MGI PMID:28291836 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:15841184), (PMID:16467156) MGI PMID:15841184 PMID:16467156 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768 		JBrowse link
G ITGAM integrin subunit alpha M involved_in ISO (PMID:18685038) ARUK-UCL PMID:18685038 NCBI chr 6:16,944,062...16,996,525
Ensembl chr 6:16,808,971...16,996,286 		JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 6:41,743,214...41,764,572
Ensembl chr 6:41,738,653...41,764,578 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:28291836) MGI PMID:28291836 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090 		JBrowse link
G LRP2 LDL receptor related protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:13,910,450...14,107,081
Ensembl chr36:13,911,865...14,107,546 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:39,132,746...39,179,427
Ensembl chr 6:39,133,965...39,179,505 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chr34:33,747,495...34,299,389
Ensembl chr34:33,748,843...34,299,276 		JBrowse link
G MRTFA myocardin related transcription factor A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:24,561,161...24,759,586
Ensembl chr10:24,561,161...24,759,081 		JBrowse link
G MRTFB myocardin related transcription factor B acts_upstream_of_or_within ISO (PMID:20534669) MGI PMID:20534669 NCBI chr 6:28,902,749...29,113,448
Ensembl chr 6:28,918,350...29,098,220 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MYO1D myosin ID ISO RGD PMID:8034741 RGD:633383 NCBI chr 9:40,171,426...40,497,556
Ensembl chr 9:40,171,158...40,496,210 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NDE1 nudE neurodevelopment protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:28,143,244...28,186,069
Ensembl chr 6:28,143,244...28,186,051 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191 		JBrowse link
G NEUROG1 neurogenin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:23,563,128...23,564,819
Ensembl chr11:23,563,803...23,564,543 		JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:15328020) MGI
GO_Central		 PMID:15328020 GO_REF:0000033 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915 		JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr 4:20,654,824...20,657,816
Ensembl chr 4:20,656,791...20,657,438 		JBrowse link
G NFIB nuclear factor I B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G NOG noggin involved_in ISO
IEA 		RGD
Ensembl		 PMID:14643011 GO_REF:0000107 RGD:1358324 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NOTCH3 notch receptor 3 acts_upstream_of_or_within ISO (PMID:16120638) MGI PMID:16120638 NCBI chr20:46,946,654...46,978,821
Ensembl chr20:46,937,485...46,978,219 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 acts_upstream_of_or_within ISO (PMID:15548577) MGI PMID:15548577 NCBI chr 3:15,707,198...15,716,875
Ensembl chr 3:15,707,640...15,716,875 		JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 acts_upstream_of_or_within ISO (PMID:15548577) MGI PMID:15548577 NCBI chr 3:44,135,143...44,148,836
Ensembl chr 3:44,136,463...44,148,524 		JBrowse link
G NUMB NUMB endocytic adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,620,444...46,781,564
Ensembl chr 8:46,607,556...46,782,175 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:113,076,678...113,103,114
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:22928023 RGD:9590181 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502 		JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:15917450)
(PMID:14625556)
(PMID:15201223) 		MGI PMID:14625556 PMID:15201223 PMID:15917450 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PAX4 paired box 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:8,714,251...8,719,387
Ensembl chr14:8,714,949...8,719,371 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107
G PCDH9 protocadherin 9 ISO RGD PMID:17614211 RGD:2316761 NCBI chr22:21,326,040...22,212,847
Ensembl chr22:21,327,856...22,213,083 		JBrowse link
G POU3F1 POU class 3 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:4,547,868...4,549,469
Ensembl chr15:4,547,920...4,549,469 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO (PMID:16154207) MGI PMID:16154207 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:15148382) MGI PMID:15148382 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (PMID:19007770) UniProt PMID:19007770 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RELN reelin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:20133625) MGI PMID:20133625 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:16330018) MGI PMID:16330018 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15882093) MGI PMID:15882093 NCBI chr22:59,902,113...59,903,820 JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in ISO (PMID:18285410) UniProt PMID:18285410 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SOX3 SRY-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:14981518) MGI PMID:14981518 NCBI chr  X:110,361,354...110,363,458
Ensembl chr  X:110,362,124...110,363,458 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G SSTR1 somatostatin receptor 1 ISO RGD PMID:10805921 RGD:2325003 NCBI chr 8:16,571,069...16,575,730 JBrowse link
G SSTR2 somatostatin receptor 2 ISO RGD PMID:10805921 RGD:2325003 NCBI chr 9:6,989,488...7,004,851
Ensembl chr 9:6,996,874...7,000,778 		JBrowse link
G SSTR3 somatostatin receptor 3 ISO RGD PMID:10805921 RGD:2325003 NCBI chr10:27,324,067...27,332,570
Ensembl chr10:27,329,174...27,330,451 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951 		JBrowse link
G TOP2B DNA topoisomerase II beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:18,159,521...18,206,413
Ensembl chr23:18,146,095...18,206,287 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within ISO (PMID:15525772) MGI PMID:15525772 NCBI chr 5:58,194,385...58,241,159
Ensembl chr 5:58,187,826...58,240,839 		JBrowse link
G TTBK2 tau tubulin kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:28291836) MGI PMID:28291836 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:75,337,347...75,397,485
Ensembl chr 7:75,335,235...75,398,325 		JBrowse link
G TYROBP transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:18685038) ARUK-UCL PMID:18685038 NCBI chr 1:116,757,271...116,760,453
Ensembl chr 1:116,757,289...116,772,325 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in ISO (PMID:21856776) UniProt PMID:21856776 NCBI chr10:69,252,926...69,262,225 JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 ISO RGD PMID:11731009 RGD:2325879 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
G ZIC1 Zic family member 1 involved_in ISO (PMID:17507568) MGI PMID:17507568
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
G ZIC5 Zic family member 5 acts_upstream_of_or_within ISO (PMID:15736266) MGI PMID:15736266 NCBI chr22:49,929,198...49,938,002
Ensembl chr22:49,931,460...49,937,853 		JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G SIX3 SIX homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:19732765) MGI PMID:19732765 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
forebrain generation of neurons term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
forebrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GAK cyclin G associated kinase acts_upstream_of_or_within ISO (PMID:18434600) MGI PMID:18434600 NCBI chr 3:91,575,537...91,630,715
Ensembl chr 3:91,574,751...91,630,663 		JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983) MGI PMID:19036983 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:31386652) MGI PMID:31386652 NCBI chr37:25,811,491...25,818,838 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:11297510) MGI PMID:11297510 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) BHF-UCL PMID:16675393 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:5,591,530...5,663,673
Ensembl chr 7:5,590,957...5,660,919 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945)
(PMID:16920270) 		MGI PMID:14715945 PMID:16920270 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (PMID:10631167) MGI PMID:10631167 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
forebrain neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 ISO induction of dopaminergic neurons in the rostral forebrain RGD PMID:9630220 RGD:2289424 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GNAQ G protein subunit alpha q acts_upstream_of_or_within ISO (PMID:15340067) MGI PMID:15340067 NCBI chr 1:80,733,530...80,928,065
Ensembl chr 1:80,715,366...80,928,065 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:15217369) MGI
GO_Central		 PMID:15217369 GO_REF:0000033 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G LHX8 LIM homeobox 8 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:15217369) MGI
GO_Central		 PMID:15217369 GO_REF:0000033 NCBI chr 6:71,329,711...71,355,851
Ensembl chr 6:71,329,820...71,352,945 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:56,133,094...56,353,609
Ensembl chr15:56,174,578...56,352,569 		JBrowse link
G SECISBP2 SECIS binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:96,879,840...96,927,583
Ensembl chr 1:96,880,369...96,933,862 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15882093) MGI PMID:15882093 NCBI chr22:59,902,113...59,903,820 JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:10803593) MGI PMID:10803593 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO RGD PMID:17936272 RGD:2314144 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:11163262) MGI PMID:11163262 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:16543408) MGI PMID:16543408 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G LHX8 LIM homeobox 8 acts_upstream_of_or_within ISO (PMID:15978004) MGI PMID:15978004 NCBI chr 6:71,329,711...71,355,851
Ensembl chr 6:71,329,820...71,352,945 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G OTP orthopedia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:29,063,359...29,071,533
Ensembl chr 3:29,064,681...29,071,509 		JBrowse link
G PHLDA1 pleckstrin homology like domain family A member 1 ISO RGD PMID:10428057 RGD:70034 NCBI chr15:19,127,371...19,128,912
Ensembl chr15:19,128,035...19,128,779 		JBrowse link
G POU3F4 POU class 3 homeobox 4 acts_upstream_of_or_within ISO (PMID:9889200) MGI PMID:9889200 NCBI chr  X:64,427,161...64,428,825
Ensembl chr  X:64,427,325...64,428,410 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15882093) MGI PMID:15882093 NCBI chr22:59,902,113...59,903,820 JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chr34:14,853,000...14,855,153 JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674 NCBI chr 9:60,348,529...60,374,037
Ensembl chr 9:60,348,335...60,374,024 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 acts_upstream_of_or_within ISO (PMID:23643363) MGI PMID:23643363 NCBI chr10:481,504...502,914
Ensembl chr10:481,817...501,551 		JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509 		JBrowse link
forebrain radial glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO PMID:11399758 UniProt PMID:11399758 RGD:8554692
G HES5 hes family bHLH transcription factor 5 involved_in ISO PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr32:37,653,163...37,679,577
Ensembl chr32:37,653,035...37,678,398 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28965759) UniProt PMID:28965759 NCBI chr15:18,528,755...18,546,303
Ensembl chr15:18,528,772...18,546,531 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G RHOA ras homolog family member A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215 		JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr37:6,430,344...6,499,310
Ensembl chr37:6,431,476...6,499,359 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G WNT2B Wnt family member 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956 		JBrowse link
G WNT7B Wnt family member 7B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160 		JBrowse link
forebrain ventricular zone progenitor cell division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU3F3 POU class 3 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:38,513,872...38,517,692
Ensembl chr10:38,513,013...38,514,684 		JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ADP ribosylation factor like GTPase 13B involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641 		JBrowse link
G FLNA filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:122,058,303...122,083,467
Ensembl chr  X:122,061,455...122,083,203 		JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
globus pallidus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:10482766 RGD:9685780 NCBI chr21:40,273,366...40,315,189
Ensembl chr21:40,273,827...40,315,189 		JBrowse link
G KCNC2 potassium voltage-gated channel subfamily C member 2 ISO RGD PMID:10482766 RGD:9685780 NCBI chr10:15,599,428...15,822,579
Ensembl chr10:15,643,962...15,818,097 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NDNF neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:19,009,966...19,053,047
Ensembl chr19:19,036,372...19,049,937 		JBrowse link
G NRP1 neuropilin 1 involved_in ISO (PMID:21059704) BHF-UCL PMID:21059704 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,293,545...14,408,984
Ensembl chr37:14,293,614...14,406,949 		JBrowse link
G PLXNA1 plexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:1,143,072...1,186,623
Ensembl chr20:870,870...1,184,321 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:21059704) BHF-UCL PMID:21059704 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SEMA3E semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:22,881,135...22,982,549
Ensembl chr18:22,881,133...23,116,696 		JBrowse link
habenula development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in ISO (PMID:10079236) BHF-UCL PMID:10079236 NCBI chr12:23,089,429...23,202,176
Ensembl chr12:23,089,459...23,202,348 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,358,100...18,365,827 JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:15367676) MGI PMID:15367676 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:16368089) MGI PMID:16368089 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr 4:20,654,824...20,657,816
Ensembl chr 4:20,656,791...20,657,438 		JBrowse link
G NFIB nuclear factor I B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11880342 PMID:20082710 RGD:729590 RGD:8552345
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:9749725 RGD:9831452 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMAD1 SMAD family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:44,093,491...44,171,177
Ensembl chr15:44,095,497...44,170,098 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:15899870) MGI PMID:15899870 NCBI chr25:3,768,851...3,844,645
Ensembl chr25:3,779,197...3,841,321 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:16330018) MGI PMID:16330018 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G TBR1 T-box brain transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11231055 RGD:2302116 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr 6:77,053,242...77,146,549
Ensembl chr 6:77,053,237...77,317,761 		JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr16:36,531,754...36,943,033
Ensembl chr16:36,531,754...36,943,033 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924 		JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB1 EPH receptor B1 ISO RGD PMID:28276447 RGD:127285619 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393 		JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:28276447 RGD:127285619 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
hippocampal interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LYPD6 LY6/PLAUR domain containing 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:51,007,147...51,069,110
Ensembl chr19:51,041,219...51,067,333 		JBrowse link
hippocampal pyramidal neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:15608631) MGI PMID:15608631 NCBI chr24:47,060,527...47,089,077
Ensembl chr24:47,060,245...47,089,711 		JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605 NCBI chr 6:27,855,702...27,950,140
Ensembl chr 6:27,855,702...27,989,331 		JBrowse link
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384 		JBrowse link
G AKAP5 A-kinase anchoring protein 5 ISO RGD PMID:19535604 RGD:2313144 NCBI chr 8:38,891,637...38,902,390
Ensembl chr 8:38,896,840...38,898,126 		JBrowse link
G ALK ALK receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:23,010,308...23,688,841
Ensembl chr17:23,010,308...23,688,841 		JBrowse link
G ANXA3 annexin A3 ISO RGD PMID:18493952 RGD:2302825 NCBI chr32:3,006,000...3,049,321
Ensembl chr32:3,005,788...3,049,049 		JBrowse link
G ATG16L1 autophagy related 16 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672 		JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:16200642 RGD:6906893 NCBI chr38:321,246...420,262
Ensembl chr38:366,656...416,952 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G BCAN brevican acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:41,313,578...41,330,178
Ensembl chr 7:41,313,579...41,330,178 		JBrowse link
G CASP3 caspase 3 ISO RGD PMID:18459132 RGD:2293317 NCBI chr16:45,920,074...45,940,507
Ensembl chr16:45,920,071...45,940,505 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:27073215 RGD:11568695 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212 		JBrowse link
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr25:30,117,384...30,137,223
Ensembl chr25:30,117,239...30,135,599 		JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit ISO RGD PMID:15558717 RGD:150530459 NCBI chr13:38,343,966...38,355,534
Ensembl chr13:38,346,104...38,355,468 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chr 9:45,594,657...45,627,499
Ensembl chr 9:45,598,899...45,627,589 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr30:37,474,997...37,487,028
Ensembl chr30:37,473,901...37,487,507 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr28:15,292,959...15,298,896
Ensembl chr28:15,293,106...15,298,852 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr30:16,954,020...17,056,728
Ensembl chr30:16,957,215...16,988,353 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:18477607) MGI PMID:18477607 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DCLK2 doublecortin like kinase 2 acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr15:48,119,227...48,365,807
Ensembl chr15:48,119,001...48,365,732 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:11163262) MGI PMID:11163262 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta ISO RGD PMID:12850562 RGD:11041879 NCBI chr 8:48,110,521...48,117,175
Ensembl chr 8:48,110,050...48,116,686 		JBrowse link
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma ISO RGD PMID:12850562 RGD:11041879 NCBI chr15:15,337,421...15,481,427
Ensembl chr15:15,337,483...15,481,425 		JBrowse link
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta ISO RGD PMID:12850562 RGD:11041879 NCBI chr17:21,321,329...21,326,357
Ensembl chr17:21,321,349...21,326,244 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon ISO RGD PMID:12850562 RGD:11041879 NCBI chr34:17,038,163...17,047,390
Ensembl chr34:17,038,203...17,046,928 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G EPHA5 EPH receptor A5 involved_in ISO (PMID:12124402) UniProt PMID:12124402 NCBI chr13:56,054,247...56,402,583
Ensembl chr13:56,058,800...56,383,301 		JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO RGD PMID:23932971 RGD:9587811 NCBI chr 9:20,271,729...20,292,918
Ensembl chr 9:20,264,552...20,290,712 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23932971 RGD:9587811 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838 		JBrowse link
G FBXO41 F-box protein 41 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:49,585,511...49,613,406
Ensembl chr17:49,599,488...49,609,166 		JBrowse link
G FEZ1 fasciculation and elongation protein zeta 1 ISO RGD PMID:14992819 RGD:13208825 NCBI chr 5:9,001,927...9,044,330
Ensembl chr 5:9,001,989...9,044,332 		JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (PMID:22726441) UniProt PMID:22726441 NCBI chr  X:108,658,113...109,156,096
Ensembl chr  X:108,658,941...109,156,594 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19535712 RGD:2325978 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19535712 RGD:2325978 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G HDAC1 histone deacetylase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (PMID:19380719) MGI PMID:19380719 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HSD17B3 hydroxysteroid 17-beta dehydrogenase 3 ISO RGD PMID:21047951 RGD:4145527 NCBI chr 1:70,551,013...70,586,364
Ensembl chr 1:70,487,334...70,586,368 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 ISO RGD PMID:21047951 RGD:4145527 NCBI chr38:19,975,935...19,999,077
Ensembl chr38:19,977,086...19,999,010 		JBrowse link
G HSD3B2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 ISO RGD PMID:21047951 RGD:4145527 NCBI chr17:56,552,945...56,561,062
Ensembl chr17:56,552,945...56,561,062 		JBrowse link
G HTR5A 5-hydroxytryptamine receptor 5A ISO RGD PMID:16572590 RGD:2316993 NCBI chr16:18,142,808...18,151,884
Ensembl chr16:18,142,830...18,152,442 		JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:22042446 RGD:10403040 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387 		JBrowse link
G INSR insulin receptor ISO RGD PMID:22042446 RGD:10403040 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:39,928,347...39,936,753
Ensembl chr27:39,933,825...39,935,312 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:15608631) MGI PMID:15608631 NCBI chr24:47,060,527...47,089,077
Ensembl chr24:47,060,245...47,089,711 		JBrowse link
G KDM6B lysine demethylase 6B ISO RGD PMID:23932971 RGD:9587811 NCBI chr 5:32,689,000...32,711,026
Ensembl chr 5:32,696,211...32,710,666 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:1,637,007...1,666,790
Ensembl chr10:1,636,932...1,664,767 		JBrowse link
G KIF5B kinesin family member 5B ISO RGD PMID:9349526 RGD:12792964 NCBI chr 2:14,835,906...14,880,896
Ensembl chr 2:14,835,901...14,878,251 		JBrowse link
G KIRREL3 kirre like nephrin family adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,583,530...8,124,045
Ensembl chr 5:7,583,805...8,123,080 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LOC491316 midkine involved_in ISO (PMID:10096022) DFLAT PMID:10096022 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chr37:25,811,491...25,818,838 JBrowse link
G LRP8 LDL receptor related protein 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736 		JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1521325 RGD:2316795 NCBI chr 1:49,090,041...49,105,244
Ensembl chr 1:49,090,041...49,105,244 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740 		JBrowse link
G MME membrane metalloendopeptidase acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605 NCBI chr23:48,966,222...49,059,919
Ensembl chr23:48,971,066...49,059,919 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:22085911 RGD:5688137 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NEFH neurofilament heavy chain ISO RGD PMID:14620872 RGD:9743946 NCBI chr26:22,726,523...22,735,129
Ensembl chr26:22,726,526...22,735,125 		JBrowse link
G NEFL neurofilament light chain ISO RGD PMID:14620872 RGD:9743946 NCBI chr25:32,463,361...32,468,965
Ensembl chr25:32,463,452...32,467,224 		JBrowse link
G NEFM neurofilament medium chain ISO RGD PMID:14620872 RGD:9743946 NCBI chr25:32,493,517...32,498,615
Ensembl chr25:32,493,675...32,498,570 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23042739), (PMID:23776487), (PMID:23964093) MGI PMID:18477394 PMID:23042739 PMID:23776487 PMID:23964093 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G NME1 non-metastatic cells 1, protein (NM23A) expressed in ISO RGD PMID:18493952 RGD:2302825 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955 		JBrowse link
G NOG noggin ISO RGD PMID:15171992 RGD:10416525 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:18493952 RGD:2302825 NCBI chr26:14,522,124...14,526,370
Ensembl chr26:14,500,074...14,529,354 		JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:20819118 RGD:8693633 NCBI chr 1:14,027,741...14,234,229
Ensembl chr 1:14,028,652...14,234,229 		JBrowse link
G PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20819118 RGD:8693633 NCBI chr 5:77,428,587...77,506,126
Ensembl chr 5:77,432,517...77,565,801 		JBrowse link
G PLXNA3 plexin A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:21123436 RGD:10043818 NCBI chr 9:26,135,982...26,152,303
Ensembl chr 9:26,137,464...26,151,810 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:10906718 RGD:9589828 NCBI chr14:59,769,553...59,944,111
Ensembl chr14:59,827,650...59,943,315 		JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:18493952 RGD:2302825 NCBI chr26:1,435,077...1,436,893
Ensembl chr26:1,434,720...1,436,993 		JBrowse link
G RARA retinoic acid receptor alpha ISO RGD PMID:18619947 RGD:8693612 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459 		JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SCT secretin involved_in ISS UniProt GO_REF:0000024
G SEMA6B semaphorin 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,151,913...55,173,434
Ensembl chr20:55,161,818...55,173,135 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 ISO RGD PMID:18502731 RGD:9999204 NCBI chr21:44,015,161...44,056,286
Ensembl chr21:44,016,133...44,054,931 		JBrowse link
G SLC32A1 solute carrier family 32 member 1 ISO RGD PMID:18502731 RGD:9999204 NCBI chr24:27,142,153...27,146,986
Ensembl chr24:27,142,423...27,146,262 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
G SRD5A2 steroid 5 alpha-reductase 2 ISO RGD PMID:21047951 RGD:4145527 NCBI chr17:25,017,113...25,056,156
Ensembl chr17:25,017,113...25,056,544 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:24074826 RGD:9684936 NCBI chr 3:27,273,188...27,335,897
Ensembl chr 3:27,274,519...27,335,783 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within ISO (PMID:10716451) MGI PMID:10716451 NCBI chr 5:58,194,385...58,241,159
Ensembl chr 5:58,187,826...58,240,839 		JBrowse link
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in ISO (PMID:31983064) UniProt PMID:31983064 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119 		JBrowse link
G UBA6 ubiquitin like modifier activating enzyme 6 acts_upstream_of_or_within ISO (PMID:23499007) MGI PMID:23499007 NCBI chr13:58,148,935...58,231,194
Ensembl chr13:58,013,212...58,231,200 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:35,522,873...35,676,086 JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,548,719...111,571,816
Ensembl chr 1:111,548,719...111,571,816 		JBrowse link
G XRN2 5'-3' exoribonuclease 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chr24:2,042,521...2,128,942
Ensembl chr24:2,042,888...2,128,867 		JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon acts_upstream_of_or_within ISO (PMID:12796778) MGI PMID:12796778 NCBI chr 9:45,506,830...45,562,081
Ensembl chr 9:45,507,282...45,562,086 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 7:35,123,417...35,130,349
Ensembl chr 7:35,117,209...35,129,134 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
G ZIC1 Zic family member 1 involved_in ISO (PMID:17507568) MGI PMID:17507568
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292 		JBrowse link
hypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:16678101) MGI PMID:16678101 NCBI chr11:2,739,958...2,742,576
Ensembl chr11:2,739,958...2,743,533 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
hypothalamus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAP1 huntingtin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,065,770...21,074,462
Ensembl chr 9:21,065,846...21,072,991 		JBrowse link
G OTP orthopedia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:29,063,359...29,071,533
Ensembl chr 3:29,064,681...29,071,509 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:57,103,712...57,108,522 JBrowse link
G PRDM13 PR/SET domain 13 involved_in ISO (PMID:34730112) UniProt PMID:34730112 NCBI chr12:57,803,068...57,811,592 JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:9067988) MGI PMID:9067988 NCBI chr11:2,739,958...2,742,576
Ensembl chr11:2,739,958...2,743,533 		JBrowse link
hypothalamus cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:18206388) MGI PMID:18206388 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
hypothalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:30498428) MGI PMID:30498428 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353 		JBrowse link
G CRH corticotropin releasing hormone ISO RGD PMID:20002962 RGD:5130950 NCBI chr29:15,831,944...15,840,560
Ensembl chr29:15,831,944...15,834,384 		JBrowse link
G CRHR1 corticotropin releasing hormone receptor 1 ISO RGD PMID:20002962 RGD:5130950 NCBI chr 9:9,708,696...9,763,281
Ensembl chr 9:9,714,204...9,763,402 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:20002962 RGD:5130950 NCBI chr14:43,366,849...43,414,398
Ensembl chr14:43,368,340...43,415,142 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:15804399 RGD:4891928 NCBI chr30:16,954,020...17,056,728
Ensembl chr30:16,957,215...16,988,353 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:12960049 RGD:1582276 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:8946059 RGD:2313681 NCBI chr 5:6,059,023...6,189,516
Ensembl chr 5:6,058,935...6,186,232 		JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:11,853,483...11,855,169
Ensembl chr25:11,853,462...11,855,445 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:23291449 RGD:7207858 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G NKX2-6 NK2 homeobox 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:33,781,294...33,787,460
Ensembl chr25:33,781,249...33,785,761 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501 		JBrowse link
G RAX retina and anterior neural fold homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:16,940,671...16,945,127
Ensembl chr 1:16,940,658...16,943,633 		JBrowse link
G RELN reelin ISO RGD PMID:10436054 RGD:634730 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SOX3 SRY-box transcription factor 3 involved_in ISO (PMID:14981518) UniProt PMID:14981518 NCBI chr  X:110,361,354...110,363,458
Ensembl chr  X:110,362,124...110,363,458 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 PMID:15804399 RGD:4891928 RGD:4892048 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
G SRD5A2 steroid 5 alpha-reductase 2 ISO RGD PMID:15804399 RGD:4891928 NCBI chr17:25,017,113...25,056,156
Ensembl chr17:25,017,113...25,056,544 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within_positive_effect ISO (PMID:23785158) UniProt PMID:23785158 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795 		JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:39,533,365...39,535,120
Ensembl chr 5:39,511,426...39,535,815 		JBrowse link
inferior colliculus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
G TFAP2D transcription factor AP-2 delta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:18,447,086...18,504,137
Ensembl chr12:18,447,105...18,504,142 		JBrowse link
interkinetic nuclear migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP120 centrosomal protein 120 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:13,184,590...13,306,975
Ensembl chr11:13,143,672...13,266,151 		JBrowse link
G DOCK7 dedicator of cytokinesis 7 involved_in ISO (PMID:22842144) UniProt PMID:22842144 NCBI chr 5:47,435,209...47,653,312
Ensembl chr 5:47,462,224...47,653,163 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:16364283) MGI PMID:16364283 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330 		JBrowse link
G HOOK3 hook microtubule tethering protein 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20152126) Ensembl
MGI		 PMID:20152126 GO_REF:0000107 NCBI chr16:22,791,198...22,940,168
Ensembl chr16:22,784,267...22,901,991 		JBrowse link
G KIF1A kinesin family member 1A ISO RGD PMID:21037580 RGD:13204706 NCBI chr25:50,855,703...50,945,014
Ensembl chr25:50,858,698...50,944,964 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:17825043 RGD:8552353
G PCM1 pericentriolar material 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20152126) Ensembl
MGI		 PMID:20152126 GO_REF:0000107 NCBI chr16:41,212,733...41,291,654
Ensembl chr16:41,214,417...41,291,376 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chr16:26,677,717...26,797,236
Ensembl chr16:26,682,327...26,797,937 		JBrowse link
G TACC2 transforming acidic coiled-coil containing protein 2 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chr28:31,735,673...31,943,184
Ensembl chr28:31,735,792...31,942,927 		JBrowse link
G TACC3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chr 3:62,368,641...62,380,898
Ensembl chr 3:62,368,642...62,381,024 		JBrowse link
interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ADP ribosylation factor like GTPase 13B involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641 		JBrowse link
lateral ganglionic eminence cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
lateral geniculate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722 		JBrowse link
lateral ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:43,592,266...43,603,903
Ensembl chr14:43,578,721...43,605,720 		JBrowse link
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:32,548,591...32,553,911
Ensembl chr 5:32,549,167...32,553,504 		JBrowse link
G COQ8B coenzyme Q8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,056,369...113,075,773
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein acts_upstream_of_or_within ISO (PMID:17150371) MGI PMID:17150371 NCBI chr19:30,640,429...30,645,704
Ensembl chr19:30,640,429...30,646,405 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:816,088...1,040,052
Ensembl chr34:805,455...1,038,273 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,201,302...14,219,121
Ensembl chr28:14,201,351...14,219,121 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within
involved_in 		ISO (PMID:29452604)
(PMID:25960350) 		MGI PMID:25960350 PMID:29452604 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,620,444...46,781,564
Ensembl chr 8:46,607,556...46,782,175 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,076,678...113,103,114
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G PAX5 paired box 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:53,194,905...53,390,204
Ensembl chr11:53,201,344...53,390,974 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within ISO (PMID:21055390) MGI PMID:21055390 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) MGI PMID:22235340 NCBI chr36:30,488,250...30,526,367
Ensembl chr36:30,488,488...30,536,765 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G LRP8 LDL receptor related protein 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736 		JBrowse link
G MBOAT7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:103,028,000...103,040,299
Ensembl chr 1:103,028,002...103,040,167 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20847152) Ensembl
MGI		 PMID:20847152 GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) MGI PMID:34235142 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
limbic system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351 		JBrowse link
mammillary axonal complex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
mammillary body development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
mammillothalamic axonal tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
medial motor column neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G LHX4 LIM homeobox 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:13,779,574...13,825,650
Ensembl chr 7:13,779,774...13,821,317 		JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
microglia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:33450391 RGD:126781687 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510 		JBrowse link
G ITGAM integrin subunit alpha M acts_upstream_of_or_within ISO (PMID:20578039) MGI PMID:20578039 NCBI chr 6:16,944,062...16,996,525
Ensembl chr 6:16,808,971...16,996,286 		JBrowse link
G NRROS negative regulator of reactive oxygen species involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,682,182...29,699,469
Ensembl chr33:29,692,371...29,767,771 		JBrowse link
G TLR2 toll like receptor 2 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241 		JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chr17:52,692,744...52,749,048
Ensembl chr17:52,694,603...52,744,276 		JBrowse link
microglia differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23717624) MGI PMID:23717624 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:12,905,336...13,030,901
Ensembl chr19:12,982,394...13,020,083 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:7,901,578...7,905,274
Ensembl chr23:7,901,250...7,904,534 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:29654250) MGI PMID:29654250 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714 		JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165 		JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:81,191,125...81,426,337
Ensembl chr 1:81,192,349...81,426,322 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,598,373...63,676,753
Ensembl chr10:63,599,229...63,676,747 		JBrowse link
midbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15689559) MGI PMID:15689559 NCBI chr 5:4,704,155...4,786,011
Ensembl chr 5:4,705,491...4,786,079 		JBrowse link
G BARHL1 BarH like homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:51,704,590...51,711,726
Ensembl chr 9:51,703,936...51,712,093 		JBrowse link
G CMA1 chymase 1 ISO RGD PMID:21396433 RGD:5128663 NCBI chr 8:4,438,244...4,441,189
Ensembl chr 8:4,438,244...4,441,189 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G CXCR2 C-X-C motif chemokine receptor 2 ISO RGD PMID:18436867 RGD:4892032 NCBI chr37:24,831,351...24,846,387
Ensembl chr37:24,843,171...24,844,247 		JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:27,687,223...27,780,007
Ensembl chr 4:27,687,287...27,806,722 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:8848044) Ensembl
ParkinsonsUK-UCL		 PMID:8848044 GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,358,100...18,365,827 JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within 		ISS
ISO 		(PMID:17687036) UniProt
MGI		 PMID:17687036 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115 		JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924 		JBrowse link
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:21752929) MGI PMID:21752929 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:11029008) MGI
UniProt		 PMID:11029008 GO_REF:0000117 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191 		JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:15201223)
(PMID:15888661)
(PMID:15201224), (PMID:20816794) 		MGI PMID:15201223 PMID:15201224 PMID:15888661 PMID:20816794 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351 		JBrowse link
G PITX3 paired like homeodomain 3 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:15950611) Ensembl
UniProt		 PMID:15950611 GO_REF:0000107 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMAD1 SMAD family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:44,093,491...44,171,177
Ensembl chr15:44,095,497...44,170,098 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:15899870) MGI PMID:15899870 NCBI chr25:3,768,851...3,844,645
Ensembl chr25:3,779,197...3,841,321 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:26637982) ParkinsonsUK-UCL PMID:26637982 NCBI chr  X:55,693,091...55,764,268
Ensembl chr  X:55,693,194...55,763,683 		JBrowse link
G TAL2 TAL bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:11071772) MGI PMID:11071772 NCBI chr11:61,425,927...61,484,525
Ensembl chr11:61,456,727...61,482,348 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:6,004,595...6,045,999
Ensembl chr38:6,004,659...6,113,714 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr 6:77,053,242...77,146,549
Ensembl chr 6:77,053,237...77,317,761 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:2205396) Ensembl
MGI		 PMID:2205396 GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSNK1D casein kinase 1 delta involved_in ISO (PMID:17244647) ParkinsonsUK-UCL PMID:17244647 NCBI chr 9:83,395...110,309
Ensembl chr 9:73,215...110,269 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (PMID:18953410), (PMID:23109420) ParkinsonsUK-UCL PMID:18953410 PMID:23109420 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RYK receptor like tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G WNT9B Wnt family member 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654 		JBrowse link
midbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:31,007,940...31,181,569
Ensembl chr17:31,009,257...31,142,063 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EN1 engrailed homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008), (PMID:19795512) MGI PMID:11029008 PMID:19795512 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSBP3 single stranded DNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:54,690,632...54,826,691
Ensembl chr 5:54,662,840...54,824,960 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11522634) MGI PMID:11522634 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920 		JBrowse link
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784 		JBrowse link
negative regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,115,175...50,152,443
Ensembl chr20:50,048,736...50,152,355 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053 		JBrowse link
negative regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 ISO RGD PMID:15829641 RGD:2302988 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:18848628) MGI PMID:18848628 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DLL3 delta like canonical Notch ligand 3 ISO RGD PMID:16144902 RGD:1599776 NCBI chr 1:113,737,662...113,745,936 JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,782,744...42,799,531
Ensembl chr18:42,782,751...42,799,459 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:882,672...887,679
Ensembl chr 7:883,279...887,811 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G KDM4A lysine demethylase 4A ISO RGD PMID:24747049 RGD:9587433 NCBI chr15:16,521,760...16,570,965
Ensembl chr15:16,521,700...16,571,000 		JBrowse link
G MBD1 methyl-CpG binding domain protein 1 ISO RGD PMID:16881068 RGD:9588644 NCBI chr 7:78,597,688...78,611,303
Ensembl chr 7:78,597,746...78,651,472 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:16881068 RGD:9588644 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:11,720,857...11,724,308 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10442636), (PMID:9878702)
(PMID:11297510) 		MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NOG noggin involved_in ISO
IEA 		RGD
Ensembl		 PMID:14975730 GO_REF:0000107 RGD:1358325 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:12075995 RGD:2325633 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024 		JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:28,242,190...28,356,218
Ensembl chr 6:28,225,677...28,357,180 		JBrowse link
negative regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18573488 RGD:4889489 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736 		JBrowse link
negative regulation of establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPV1 transient receptor potential cation channel subfamily V member 1 ISO RGD PMID:16056236 RGD:2317116 NCBI chr 9:47,404,987...47,443,871
Ensembl chr 9:47,404,972...47,431,926 		JBrowse link
G TTPA alpha tocopherol transfer protein involved_in ISO (PMID:19923370) BHF-UCL PMID:19923370 NCBI chr29:13,177,690...13,198,910
Ensembl chr29:13,182,308...13,192,553 		JBrowse link
negative regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:11,331,574...11,337,991
Ensembl chr30:11,331,569...11,337,997 		JBrowse link
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within 		ISO
IEA 		PMID:11399758 UniProt
Ensembl		 PMID:11399758 GO_REF:0000107 RGD:8554692
G HES5 hes family bHLH transcription factor 5 involved_in ISO PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:19555672 RGD:10043320 NCBI chr 6:74,932,789...74,986,573 JBrowse link
negative regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:16388796 PMID:22710965 RGD:2289009 RGD:9068402 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:8,686,653...8,801,903
Ensembl chr12:8,748,655...8,799,059 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:17678855), (PMID:23042297) MGI PMID:17678855 PMID:23042297 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:9651217) MGI PMID:9651217 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277 		JBrowse link
G DUSP10 dual specificity phosphatase 10 ISO RGD PMID:19139271 RGD:7775012 NCBI chr38:16,196,354...16,233,640
Ensembl chr38:16,196,635...16,231,315 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO
IEA 		RGD
Ensembl		 PMID:12666205 GO_REF:0000107 RGD:9685388
G HES5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:17006542) Ensembl
MGI		 PMID:17006542 GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:15895088) MGI PMID:15895088 NCBI chr30:38,668,199...38,738,178
Ensembl chr30:38,721,394...38,737,464 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:11301021) MGI PMID:11301021 NCBI chr10:54,954,852...54,957,116 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:15944386) MGI PMID:15944386 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:8,256,513...8,263,238
Ensembl chr32:8,256,254...8,262,004 		JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:40,568,948...40,570,240
Ensembl chr28:40,569,093...40,570,793 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G SIRT2 sirtuin 2 ISO RGD PMID:17344398 RGD:8553877 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583 		JBrowse link
G TMEM98 transmembrane protein 98 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,130,421...40,144,120
Ensembl chr 9:40,128,885...40,144,181 		JBrowse link
neuroblast division in subventricular zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKNA AT-hook transcription factor involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:68,561,522...68,600,724
Ensembl chr11:68,562,145...68,598,557 		JBrowse link
G COQ8B coenzyme Q8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,056,369...113,075,773
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,620,444...46,781,564
Ensembl chr 8:46,607,556...46,782,175 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,076,678...113,103,114
Ensembl chr 1:113,057,141...113,102,074 		JBrowse link
neurohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTP orthopedia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:29,063,359...29,071,533
Ensembl chr 3:29,064,681...29,071,509 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:57,103,712...57,108,522 JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:32,548,591...32,553,911
Ensembl chr 5:32,549,167...32,553,504 		JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUN1 Sad1 and UNC84 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:15,996,061...16,047,788
Ensembl chr 6:15,997,488...16,047,687 		JBrowse link
G SUN2 Sad1 and UNC84 domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,055,508...26,074,972
Ensembl chr10:26,055,536...26,074,434 		JBrowse link
G SYNE2 spectrin repeat containing nuclear envelope protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,373,900...38,643,544
Ensembl chr 8:38,373,964...38,643,240 		JBrowse link
nucleus accumbens development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
oculomotor nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACKR3 atypical chemokine receptor 3 involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr25:47,327,921...47,339,632
Ensembl chr25:47,327,963...47,339,622 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924 		JBrowse link
oculomotor nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:8622766) UniProt PMID:8622766 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132 		JBrowse link
G ARX aristaless related homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G CRTAC1 cartilage acidic protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:11,078,085...11,227,026
Ensembl chr28:11,078,173...11,227,014 		JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510 		JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:7590232) MGI PMID:7590232 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G DPYSL2 dihydropyrimidinase like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chr25:30,900,347...31,038,256
Ensembl chr25:30,903,253...31,038,144 		JBrowse link
G EFNA2 ephrin A2 ISO RGD PMID:12234653 RGD:634733
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G EOMES eomesodermin acts_upstream_of_or_within ISO (PMID:19435790) MGI PMID:19435790 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16971467) MGI PMID:16971467
G FUT1 fucosyltransferase 1 (H blood group) involved_in ISO (PMID:16884711) UniProt PMID:16884711 NCBI chr 1:107,575,011...107,577,427
Ensembl chr 1:107,575,782...107,576,879 		JBrowse link
G GSX2 GS homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19109490) MGI PMID:19109490 NCBI chr10:54,954,852...54,957,116 JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:10,282,452...10,283,479 JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:25331604) MGI PMID:25331604 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:18024993) MGI
UniProt		 PMID:18024993 GO_REF:0000117 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SALL3 spalt like transcription factor 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:1,413,991...1,421,516
Ensembl chr 1:1,416,390...1,435,326 		JBrowse link
G SEMA3A semaphorin 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SLIT1 slit guidance ligand 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:12097499) MGI
UniProt		 PMID:12097499 GO_REF:0000117 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075 		JBrowse link
G ZIC1 Zic family member 1 involved_in ISO (PMID:17507568) MGI PMID:17507568
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in ISO (PMID:17360927) UniProt PMID:17360927 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:17360927) UniProt PMID:17360927 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G SALL3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (PMID:18260139) MGI PMID:18260139 NCBI chr 1:1,413,991...1,421,516
Ensembl chr 1:1,416,390...1,435,326 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G DLX5 distal-less homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G MIR200A microRNA mir-200a acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 5:56,369,063...56,369,152
Ensembl chr 5:56,369,061...56,369,151 		JBrowse link
G MIR200B microRNA mir-200b acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 5:56,368,400...56,368,479
Ensembl chr 5:56,368,400...56,368,479 		JBrowse link
G MIR200C microRNA mir-200c acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr27:38,082,097...38,082,159
Ensembl chr27:38,082,091...38,082,169 		JBrowse link
G MIR9-2 microRNA mir-9-2 acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 3:19,997,697...19,997,756
Ensembl chr 3:19,997,682...19,997,768 		JBrowse link
G MIR9-3 microRNA mir-9-3 acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 3:52,410,840...52,410,900
Ensembl chr 3:52,410,825...52,410,914 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in ISO (PMID:18024993) UniProt PMID:18024993 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G UNCX UNC homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:15,652,600...15,657,016
Ensembl chr 6:15,653,576...15,657,927 		JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
olfactory cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:22,023,176...22,080,656
Ensembl chr38:22,023,221...22,080,604 		JBrowse link
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
olfactory lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:12926013) MGI PMID:12926013 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G SEMA7A semaphorin 7A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:37,531,986...37,547,650
Ensembl chr30:37,531,971...37,566,645 		JBrowse link
oligodendrocyte cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OLIG2 oligodendrocyte transcription factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G SOX6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549 		JBrowse link
oligodendrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G B9D2 B9 domain containing 2 involved_in ISO (PMID:22384214) CACAO PMID:22384214 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G CD9 CD9 molecule ISO RGD PMID:12420314 RGD:2326210 NCBI chr27:38,742,539...38,754,984
Ensembl chr27:38,742,963...38,774,576 		JBrowse link
G CERS5 ceramide synthase 5 ISO RGD PMID:21148554 RGD:156431059 NCBI chr27:4,565,940...4,597,036
Ensembl chr27:4,565,420...4,602,391 		JBrowse link
G CERS6 ceramide synthase 6 ISO RGD PMID:21148554 RGD:156431059 NCBI chr36:13,307,461...13,608,123
Ensembl chr36:13,308,110...13,602,875 		JBrowse link
G EIF2B1 eukaryotic translation initiation factor 2B subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:6,011,280...6,022,562
Ensembl chr26:6,011,301...6,022,518 		JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:48,110,521...48,117,175
Ensembl chr 8:48,110,050...48,116,686 		JBrowse link
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma involved_in ISO (PMID:15217090) UniProt PMID:15217090 NCBI chr15:15,337,421...15,481,427
Ensembl chr15:15,337,483...15,481,425 		JBrowse link
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,321,329...21,326,357
Ensembl chr17:21,321,349...21,326,244 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,038,163...17,047,390
Ensembl chr34:17,038,203...17,046,928 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G GSN gelsolin ISO RGD PMID:7817780 RGD:1599870 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129 		JBrowse link
G GSTP1 glutathione S-transferase pi 1 ISO RGD PMID:17681700 RGD:2317862 NCBI chr18:49,905,161...49,908,182
Ensembl chr18:49,905,161...49,908,182 		JBrowse link
G HDAC10 histone deacetylase 10 ISO RGD PMID:18627006 RGD:2306445 NCBI chr10:16,996,307...17,001,365
Ensembl chr10:16,995,762...17,078,262 		JBrowse link
G HDAC11 histone deacetylase 11 ISO RGD PMID:18627006 RGD:2306445 NCBI chr20:3,792,832...3,815,922
Ensembl chr20:3,792,693...3,837,192 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chr38:22,114,718...22,143,625
Ensembl chr38:22,130,508...22,140,813 		JBrowse link
G KCNQ3 potassium voltage-gated channel subfamily Q member 3 ISO RGD PMID:21750731 RGD:9686431 NCBI chr13:28,765,472...29,062,371
Ensembl chr13:28,773,738...29,062,370 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:11301021) MGI PMID:11301021 NCBI chr10:54,954,852...54,957,116 JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:11948806 RGD:10054294 NCBI chr11:65,690,806...65,822,166
Ensembl chr11:65,692,973...65,822,312 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:15504915 RGD:2303714 NCBI chr29:7,367,617...7,448,862
Ensembl chr29:7,332,684...7,448,507 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:26140854 RGD:11343660 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (PMID:23575864) MGI PMID:23575864 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:17382307 RGD:2317494 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G NSUN5 NOP2/Sun RNA methyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,887,941...6,899,515
Ensembl chr 6:6,888,005...6,899,517 		JBrowse link
G OLIG1 oligodendrocyte transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:27,718,925...27,721,301
Ensembl chr31:27,719,026...27,719,862 		JBrowse link
G PRDM8 PR/SET domain 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr32:4,435,693...4,451,500
Ensembl chr32:4,443,289...4,451,036 		JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:22433866 RGD:243048458 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,680,441...26,690,530
Ensembl chr10:26,681,122...26,689,882 		JBrowse link
G SOX11 SRY-box transcription factor 11 ISO RGD PMID:9632656 RGD:68859
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19741146) MGI PMID:19741146 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TPPP tubulin polymerization promoting protein involved_in ISO (PMID:31522887) UniProt PMID:31522887 NCBI chr34:11,633,054...11,645,585
Ensembl chr34:11,629,378...11,642,639 		JBrowse link
G WASF3 WASP family member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:12,804,485...12,881,988
Ensembl chr25:12,805,431...12,877,770 		JBrowse link
G ZNF488 zinc finger protein 488 acts_upstream_of_or_within
involved_in 		ISO
IBA 		(PMID:16908628) MGI
GO_Central		 PMID:16908628 GO_REF:0000033 NCBI chr 4:34,916,782...34,966,706
Ensembl chr 4:34,899,635...34,966,452 		JBrowse link
oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E ISO RGD PMID:21972082 RGD:6903911 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G BCL2 BCL2 apoptosis regulator ISO RGD PMID:12787069 RGD:631874 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:12787069 RGD:631874 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797 		JBrowse link
G BOK BCL2 family apoptosis regulator BOK ISO RGD PMID:12787069 RGD:631874 NCBI chr25:51,449,700...51,450,967 JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CDKN2C cyclin dependent kinase inhibitor 2C ISO RGD PMID:11969268 RGD:1298749 NCBI chr15:10,219,974...10,224,944
Ensembl chr15:10,220,185...10,224,390 		JBrowse link
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079 		JBrowse link
G CSK C-terminal Src kinase ISO RGD PMID:15504915 RGD:2303714 NCBI chr30:37,851,269...37,870,382
Ensembl chr30:37,852,046...37,870,378 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of ISO (PMID:17678855), (PMID:23042297) MGI PMID:17678855 PMID:23042297 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of ISO (PMID:9651217) MGI PMID:9651217 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277 		JBrowse link
G DUSP10 dual specificity phosphatase 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:16,196,354...16,233,640
Ensembl chr38:16,196,635...16,231,315 		JBrowse link
G EED embryonic ectoderm development acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:13,260,062...13,289,511
Ensembl chr21:13,260,002...13,289,337 		JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21490970 RGD:5131646 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294 		JBrowse link
G EXOC4 exocyst complex component 4 ISO RGD PMID:16478790 RGD:2314419 NCBI chr14:3,334,286...4,077,478
Ensembl chr14:3,334,220...4,077,411 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GPR17 G protein-coupled receptor 17 ISO RGD PMID:24613411 RGD:13792699 NCBI chr19:22,958,778...22,968,489
Ensembl chr19:22,963,363...22,964,382 		JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:24613411 RGD:13792699 NCBI chr18:50,148,566...50,167,422
Ensembl chr18:50,148,598...50,167,428 		JBrowse link
G GRK5 G protein-coupled receptor kinase 5 ISO RGD PMID:24613411 RGD:13792699 NCBI chr28:29,424,350...29,636,552
Ensembl chr28:29,424,593...29,632,741 		JBrowse link
G HDAC1 histone deacetylase 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of ISO (PMID:19503085) MGI PMID:19503085 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:14991837 RGD:9685479 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011 		JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of ISO (PMID:15895088) MGI PMID:15895088 NCBI chr30:38,668,199...38,738,178
Ensembl chr30:38,721,394...38,737,464 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:11301021) MGI PMID:11301021 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:20697302 RGD:12789708 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:23,171,028...23,208,055
Ensembl chr14:23,171,050...23,555,257 		JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085 		JBrowse link
G NEUROD4 neuronal differentiation 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:384,809...396,731
Ensembl chr27:389,095...390,090 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of ISO (PMID:15944386) MGI PMID:15944386 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:29437824)
(PMID:29106906) 		MGI PMID:29106906 PMID:29437824 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G NKX2-2 NK2 homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO
IEA 		(PMID:15629701) MGI
Ensembl		 PMID:15629701 GO_REF:0000107 NCBI chr32:8,256,513...8,263,238
Ensembl chr32:8,256,254...8,262,004 		JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO
IEA 		(PMID:15629701) MGI
Ensembl		 PMID:15629701 GO_REF:0000107 NCBI chr28:40,568,948...40,570,240
Ensembl chr28:40,569,093...40,570,793 		JBrowse link
G NLGN3 neuroligin 3 acts_upstream_of_or_within ISO (PMID:19139271) MGI PMID:19139271 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:12876431 GO_REF:0000107 RGD:1581402 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NRG1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:11756753) MGI PMID:11756753 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:11566099) RGD
Ensembl
MGI
InterPro		 PMID:11566099 PMID:22173726 GO_REF:0000002 GO_REF:0000107 RGD:40902844 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:26166575) MGI PMID:26166575 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PTPRA protein tyrosine phosphatase receptor type A ISO RGD PMID:19812040 RGD:2314625 NCBI chr24:18,224,355...18,395,650
Ensembl chr24:18,224,801...18,296,350 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:41,586,262...41,635,386
Ensembl chr18:41,586,112...41,635,308 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 involved_in ISO
IBA
IEA 		RGD
GO_Central
Ensembl		 PMID:8812065 GO_REF:0000033 GO_REF:0000107 RGD:9590122 NCBI chr14:59,769,553...59,944,111
Ensembl chr14:59,827,650...59,943,315 		JBrowse link
G RHEB Ras homolog, mTORC1 binding acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:15,439,910...15,483,489
Ensembl chr16:15,434,111...15,483,419 		JBrowse link
G RTN4 reticulon 4 ISO RGD PMID:19236864 RGD:2314931 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574 		JBrowse link
G SEBOX SEBOX homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,614,770...42,616,412
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SLC8A3 solute carrier family 8 member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,780,363...43,926,142
Ensembl chr 8:43,781,120...43,926,343 		JBrowse link
G SOX10 SRY-box transcription factor 10 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:24204311), (PMID:27532821) Ensembl
UniProt		 PMID:24204311 PMID:27532821 GO_REF:0000107 NCBI chr10:26,680,441...26,690,530
Ensembl chr10:26,681,122...26,689,882 		JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr27:22,857,661...23,855,709
Ensembl chr27:23,452,985...23,851,380 		JBrowse link
G SOX6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549 		JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within 		IBA
ISO 		(PMID:17084361) GO_Central
MGI		 PMID:17084361 GO_REF:0000033 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 ISO RGD PMID:16288477 RGD:11038733 NCBI chr 9:32,692,517...32,696,325
Ensembl chr 9:32,694,073...32,696,285 		JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:40,992,797...41,038,729
Ensembl chr 9:40,994,825...41,038,645 		JBrowse link
G TPPP tubulin polymerization promoting protein involved_in ISO (PMID:31522887) UniProt PMID:31522887 NCBI chr34:11,633,054...11,645,585
Ensembl chr34:11,629,378...11,642,639 		JBrowse link
G TRPC4 transient receptor potential cation channel subfamily C member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:2,927,347...3,133,935
Ensembl chr25:2,981,518...3,132,829 		JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:19139271) MGI PMID:19139271 NCBI chr17:52,692,744...52,749,048
Ensembl chr17:52,694,603...52,744,276 		JBrowse link
G VTN vitronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,617,860...42,620,825
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARPC5 actin related protein 2/3 complex subunit 5 ISO RGD PMID:23459330 RGD:11049475 NCBI chr 7:16,976,392...16,986,015
Ensembl chr 7:16,977,555...16,985,943 		JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:22015925 RGD:7248608 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:22015925 RGD:7248608 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G RELN reelin ISO RGD PMID:20035841 RGD:2317761 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
pallium cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:25,199,287...25,240,693
Ensembl chr 9:25,198,805...25,240,578 		JBrowse link
pallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
pituitary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCYAP1 adenylate cyclase activating polypeptide 1 ISO RGD PMID:18160680 RGD:2325274 NCBI chr 7:67,682,421...67,691,035 JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:17180597 RGD:2306413 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 ISO RGD PMID:17180597 RGD:2306413 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G CDH1 cadherin 1 ISO RGD PMID:17373711 RGD:2289637 NCBI chr 5:80,757,508...80,834,878
Ensembl chr 5:80,757,508...80,834,878 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr37:15,921,214...15,978,492
Ensembl chr37:15,939,138...15,977,556 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:8946059 RGD:2313681 NCBI chr 5:6,059,023...6,189,516
Ensembl chr 5:6,058,935...6,186,232 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
UniProt
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G INHBB inhibin subunit beta B ISO RGD PMID:18160680 RGD:2325274 NCBI chr19:29,765,697...29,768,485
Ensembl chr19:29,767,682...29,768,077 		JBrowse link
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:17392792) MGI PMID:17392792 NCBI chr 2:76,313,742...76,375,716
Ensembl chr 2:76,156,434...76,375,632 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G MSX1 msh homeobox 1 ISO RGD PMID:16451220 RGD:5132608 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G PCSK1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:15208361 RGD:2308902 NCBI chr 3:13,233,342...13,276,921
Ensembl chr 3:13,233,594...13,274,094 		JBrowse link
G PITX1 paired like homeodomain 1 acts_upstream_of_or_within ISO (PMID:10049363) MGI PMID:10049363 NCBI chr11:23,069,731...23,075,085
Ensembl chr11:23,069,716...23,080,941 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:10499586)
(PMID:10498698) 		MGI PMID:10498698 PMID:10499586 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:16556738) MGI PMID:16556738 NCBI chr31:769,454...788,761
Ensembl chr31:769,487...787,626 		JBrowse link
G PROP1 PROP paired-like homeobox 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:11731482) InterPro
MGI		 PMID:11731482 GO_REF:0000002 NCBI chr11:2,739,958...2,742,576
Ensembl chr11:2,739,958...2,743,533 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SFT2D2 SFT2 domain containing 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:30,258,748...30,281,371 JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:18775421) MGI
Ensembl		 PMID:18775421 GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in ISO (PMID:18285410) UniProt PMID:18285410 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SOX3 SRY-box transcription factor 3 involved_in ISO (PMID:14981518) UniProt PMID:14981518 NCBI chr  X:110,361,354...110,363,458
Ensembl chr  X:110,362,124...110,363,458 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
G TBX19 T-box transcription factor 19 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:30,198,912...30,248,410
Ensembl chr 7:30,185,850...30,365,512 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:17919533) MGI PMID:17919533 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G TIPRL TOR signaling pathway regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:30,291,330...30,329,317
Ensembl chr 7:30,185,850...30,365,512 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:8313466) MGI PMID:8313466 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in ISO (PMID:21875655) UniProt PMID:21875655 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G LOC119877796 homeobox protein TGIF1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302 		JBrowse link
positive regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:33841088 RGD:151665762 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510 		JBrowse link
G TTBK1 tau tubulin kinase 1 acts_upstream_of ISO (PMID:16923168) ARUK-UCL PMID:16923168 NCBI chr12:11,738,466...11,774,663
Ensembl chr12:11,738,232...11,757,814 		JBrowse link
positive regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724 		JBrowse link
G BIN1 bridging integrator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,503,934...23,534,407
Ensembl chr19:23,375,363...23,534,303 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217 		JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 involved_in ISO (PMID:12090754) BHF-UCL PMID:12090754 NCBI chr18:50,084,120...50,093,825
Ensembl chr18:50,083,915...50,102,651 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:5,956,924...5,958,833 JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:22270046 RGD:6482669 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458 		JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:43,214,050...43,273,014
Ensembl chr 2:43,214,050...43,248,124 		JBrowse link
G LIF LIF interleukin 6 family cytokine acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:23,400,226...23,418,538
Ensembl chr26:23,403,364...23,406,851 		JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19109490) MGI PMID:19109490 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MAG myelin associated glycoprotein ISO RGD PMID:19349915 RGD:9685287 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 ISO RGD PMID:23769735 RGD:10045891 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G SERPINE2 serpin family E member 2 involved_in ISO (PMID:1691280) BHF-UCL PMID:1691280 NCBI chr37:29,699,551...29,750,151
Ensembl chr37:29,700,024...29,724,228 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
positive regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PITX3 paired like homeodomain 3 ISO RGD PMID:18385323 RGD:11535083 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716 		JBrowse link
G RYK receptor like tyrosine kinase involved_in ISO PMID:23517308 ParkinsonsUK-UCL PMID:23517308 RGD:11054651 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:10027293) MGI PMID:10027293 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:882,672...887,679
Ensembl chr 7:883,279...887,811 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
positive regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:18579678) MGI PMID:18579678 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
positive regulation of microglia differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 involved_in ISO (PMID:29909984) UniProt PMID:29909984 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:21347250) ParkinsonsUK-UCL PMID:21347250 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
positive regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:16634055 RGD:1599295 NCBI chr 9:47,338,435...47,361,974
Ensembl chr 9:47,343,120...47,360,914 		JBrowse link
G CLCN2 chloride voltage-gated channel 2 ISO RGD PMID:29344669 RGD:213230158 NCBI chr34:17,224,136...17,238,755
Ensembl chr34:17,223,215...17,239,621 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in ISO (PMID:20534485) BHF-UCL PMID:20534485 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740 		JBrowse link
G DAG1 dystroglycan 1 ISO RGD PMID:17395644 RGD:11541054 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:22139091 RGD:9685417 NCBI chr13:18,586,886...18,697,339
Ensembl chr13:18,587,129...18,697,324 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G HDAC1 histone deacetylase 1 acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:22573687 GO_REF:0000107 RGD:9590148 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (PMID:19503085) RGD
MGI		 PMID:19503085 PMID:22573687 RGD:9590148 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G IL33 interleukin 33 ISO RGD PMID:31165473 RGD:40400907 NCBI chr11:27,219,878...27,256,723
Ensembl chr11:27,219,878...27,256,721 		JBrowse link
G IL34 interleukin 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,601,310...76,612,665
Ensembl chr 5:76,555,214...76,625,012 		JBrowse link
G MDK midkine involved_in ISO (PMID:27445335) UniProt PMID:27445335
G MIR219-2 microRNA mir-219-2 acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr 9:55,139,107...55,139,171
Ensembl chr 9:55,139,107...55,139,171 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:24101522) MGI PMID:24101522 NCBI chr20:48,620,335...48,620,386
Ensembl chr20:48,620,323...48,620,397 		JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:19439614 GO_REF:0000107 RGD:10040963 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G MYRF myelin regulatory factor ISO RGD PMID:27370227 RGD:213230157 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr32:8,256,513...8,263,238
Ensembl chr32:8,256,254...8,262,004 		JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:40,568,948...40,570,240
Ensembl chr28:40,569,093...40,570,793 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:18543250 RGD:2301878 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 ISO RGD PMID:22041901 RGD:9491827 NCBI chr 8:3,248,349...3,257,567
Ensembl chr 8:3,248,404...3,257,456 		JBrowse link
G PTN pleiotrophin involved_in ISO (PMID:30667096)
(PMID:27445335) 		UniProt PMID:27445335 PMID:30667096 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G PTPRA protein tyrosine phosphatase receptor type A ISO RGD PMID:19812040 RGD:2314625 NCBI chr24:18,224,355...18,395,650
Ensembl chr24:18,224,801...18,296,350 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 involved_in ISO PMID:30667096 UniProt PMID:30667096 RGD:14397553 NCBI chr14:59,769,553...59,944,111
Ensembl chr14:59,827,650...59,943,315 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO
IEA 		RGD
Ensembl		 PMID:17575274 GO_REF:0000107 RGD:10045992 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714 		JBrowse link
G RHEB Ras homolog, mTORC1 binding acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,439,910...15,483,489
Ensembl chr16:15,434,111...15,483,419 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305 		JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:84,140,179...84,151,219
Ensembl chr 2:84,141,911...84,157,191 		JBrowse link
G TP73 tumor protein p73 ISO RGD PMID:14960496 RGD:2291843 NCBI chr 5:58,194,385...58,241,159
Ensembl chr 5:58,187,826...58,240,839 		JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568 		JBrowse link
G ZNF488 zinc finger protein 488 acts_upstream_of_or_within
involved_in 		ISO (PMID:16908628)
(PMID:22355521) 		MGI
UniProt		 PMID:16908628 PMID:22355521 NCBI chr 4:34,916,782...34,966,706
Ensembl chr 4:34,899,635...34,966,452 		JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
principal sensory nucleus of trigeminal nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIRREL3 kirre like nephrin family adhesion molecule 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:7,583,530...8,124,045
Ensembl chr 5:7,583,805...8,123,080 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16956587)
(PMID:16819976) 		MGI PMID:16819976 PMID:16956587 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
prolactin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
putamen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
pyramidal neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205) MGI PMID:16625205 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G DCLK2 doublecortin like kinase 2 acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr15:48,119,227...48,365,807
Ensembl chr15:48,119,001...48,365,732 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
G PLXNA3 plexin A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G SCYL2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,365,702...39,429,979
Ensembl chr15:39,365,157...39,428,085 		JBrowse link
G SLC4A10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:7,106,897...7,392,275
Ensembl chr36:7,106,994...7,390,398 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
pyramidal neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr34:20,112,302...20,135,705
Ensembl chr34:20,113,322...20,124,704 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:22101068) MGI PMID:22101068 NCBI chr37:25,811,491...25,818,838 JBrowse link
G LYPD6 LY6/PLAUR domain containing 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:51,007,147...51,069,110
Ensembl chr19:51,041,219...51,067,333 		JBrowse link
G RTP2 receptor transporter protein 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr34:20,087,395...20,091,248
Ensembl chr34:20,087,226...20,115,428 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:35522199) MGI PMID:35522199 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
G UNC5D unc-5 netrin receptor D acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chr16:29,204,364...29,733,726
Ensembl chr16:29,210,853...29,732,912 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DISC1 DISC1 scaffold protein ISO RGD PMID:16299498 RGD:5509783 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558 		JBrowse link
G FOXG1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:28,807,368...29,035,946
Ensembl chr 4:28,854,908...29,045,986 		JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA2 catenin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,472,346...44,504,881
Ensembl chr17:43,472,923...44,557,766 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 5:24,393,692...24,477,595
Ensembl chr 5:24,396,823...24,488,043 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:24210661)
(PMID:9338784)
(PMID:9338785) 		MGI
UniProt		 PMID:9338784 PMID:9338785 PMID:24210661 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:28,284,836...28,494,618
Ensembl chr10:28,192,683...28,489,114 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973 		JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr23:37,578,222...37,584,862
Ensembl chr23:37,578,273...37,584,523 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714 		JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10375501) MGI PMID:10375501 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr 7:44,250,822...44,289,737 JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G ZNF423 zinc finger protein 423 acts_upstream_of_or_within ISO (PMID:27727273) MGI PMID:27727273 NCBI chr 2:65,512,342...65,778,410
Ensembl chr 2:65,438,842...65,778,407 		JBrowse link
regulation of establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRA2 adhesion G protein-coupled receptor A2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:28288111) Ensembl
UniProt		 PMID:28288111 GO_REF:0000107 NCBI chr16:27,547,722...27,583,069
Ensembl chr16:27,549,308...27,583,070 		JBrowse link
G GLIPR2 GLI pathogenesis related 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,622,460...52,634,602
Ensembl chr11:52,615,039...52,681,270 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,519,303...52,607,753
Ensembl chr11:52,519,317...52,607,217 		JBrowse link
regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G DUSP15 dual specificity phosphatase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:21,323,751...21,332,584
Ensembl chr24:21,324,085...21,333,025 		JBrowse link
G OPALIN oligodendrocytic myelin paranodal and inner loop protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:9,760,419...9,772,123
Ensembl chr28:9,760,612...9,771,737 		JBrowse link
G SLC45A3 solute carrier family 45 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,110,209...2,130,233
Ensembl chr38:2,078,008...2,125,069 		JBrowse link
G SOX1 SRY-box transcription factor 1 involved_in ISO (PMID:19723505) UniProt PMID:19723505 NCBI chr22:59,902,113...59,903,820 JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19503085) MGI PMID:19503085 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
G TNFRSF21 TNF receptor superfamily member 21 involved_in ISO (PMID:21725297) UniProt PMID:21725297 NCBI chr12:15,343,953...15,408,230 JBrowse link
G WDR1 WD repeat domain 1 acts_upstream_of_or_within ISO PMID:20631256 MGI PMID:20631256 RGD:8693352 NCBI chr 3:69,305,731...69,348,183
Ensembl chr 3:69,305,731...69,348,177 		JBrowse link
regulation of timing of subpallium neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854 		JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA2 homeobox A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800), (PMID:9806922)
(PMID:10529420) 		MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614 		JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:8102800), (PMID:9806922) 		MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948 		JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G HOXB3 homeobox B3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,810,299...24,837,434
Ensembl chr 9:24,809,739...24,836,058 		JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 ISO RGD PMID:21501682 RGD:8552349
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
somatic motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr37:30,863,098...30,885,831
Ensembl chr37:30,867,479...30,884,895 		JBrowse link
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:25,895,628...25,900,338
Ensembl chr21:25,892,321...25,900,351 		JBrowse link
G TCTN1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:8,411,429...8,444,640
Ensembl chr26:8,407,105...8,437,027 		JBrowse link
somatic motor neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:9230312) MGI PMID:9230312
somatotropin secreting cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRHR growth hormone releasing hormone receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753 		JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:17015435) MGI PMID:17015435 NCBI chr31:769,454...788,761
Ensembl chr31:769,487...787,626 		JBrowse link
somatotropin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:1334535), (PMID:6194978) MGI PMID:1334535 PMID:6194978 NCBI chr31:769,454...788,761
Ensembl chr31:769,487...787,626 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:6194978) MGI PMID:6194978 NCBI chr11:2,739,958...2,742,576
Ensembl chr11:2,739,958...2,743,533 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111 		JBrowse link
spinal cord anterior/posterior patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:11,853,483...11,855,169
Ensembl chr25:11,853,462...11,855,445 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G LHX5 LIM homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815 		JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760 		JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (PMID:9858722) MGI PMID:9858722 NCBI chr37:28,346,476...28,443,648
Ensembl chr37:28,346,563...28,444,561 		JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:79,813,835...79,952,490
Ensembl chr 2:79,815,748...79,915,003 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
spinal cord association neuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LBX1 ladybird homeobox 1 acts_upstream_of_or_within ISO (PMID:12062038) MGI PMID:12062038 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486 		JBrowse link
spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544 		JBrowse link
G ACTL6A actin like 6A ISO RGD PMID:23677776 RGD:9587760 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ACTL6B actin like 6B ISO RGD PMID:23677776 RGD:9587760 NCBI chr 6:9,045,477...9,059,106
Ensembl chr 6:9,045,551...9,058,912 		JBrowse link
G AHI1 Abelson helper integration site 1 ISO RGD PMID:19819228 RGD:11537397 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351 		JBrowse link
G AKAP5 A-kinase anchoring protein 5 ISO RGD PMID:19535604 RGD:2313144 NCBI chr 8:38,891,637...38,902,390
Ensembl chr 8:38,896,840...38,898,126 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:23681769 RGD:10040966 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G BAG3 BAG cochaperone 3 ISO RGD PMID:19415333 RGD:2325845 NCBI chr28:29,792,612...29,815,466
Ensembl chr28:29,792,777...29,815,138 		JBrowse link
G DCX doublecortin ISO RGD PMID:25487013 RGD:12904756 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:19389377) UniProt PMID:19389377 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G DPYSL2 dihydropyrimidinase like 2 ISO RGD PMID:8946055 RGD:2316253 NCBI chr25:30,900,347...31,038,256
Ensembl chr25:30,903,253...31,038,144 		JBrowse link
G EED embryonic ectoderm development ISO RGD PMID:20515739 RGD:9491842 NCBI chr21:13,260,062...13,289,511
Ensembl chr21:13,260,002...13,289,337 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678), (PMID:23717624), (PMID:31666661) MGI PMID:21935678 PMID:23717624 PMID:31666661 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:19877275) MGI PMID:19877275 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GLRA2 glycine receptor alpha 2 ISO RGD PMID:12124753 RGD:708602 NCBI chr  X:10,859,699...11,033,386
Ensembl chr  X:10,860,476...11,033,287 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:19446017 RGD:2325980 NCBI chr 4:55,801,269...56,103,383
Ensembl chr 4:55,803,296...56,103,669 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19446017 RGD:2325980 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G IFT80 intraflagellar transport 80 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr34:26,332,456...26,455,428 JBrowse link
G KCNH2 potassium voltage-gated channel subfamily H member 2 ISO RGD PMID:15365256 RGD:7243961 NCBI chr16:15,009,031...15,041,786
Ensembl chr16:15,009,031...15,041,504 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,590,996...48,610,264
Ensembl chr17:48,591,768...48,610,392 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO cervical spinal cord RGD PMID:12605461 RGD:12790706 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (PMID:20589884) MGI PMID:20589884 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992 		JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO RGD PMID:9078435 RGD:9686095 NCBI chr10:27,465,007...27,469,788
Ensembl chr10:27,443,865...27,469,554 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:23681769 RGD:10040966 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G NEFH neurofilament heavy chain ISO RGD PMID:2108255 RGD:9698442 NCBI chr26:22,726,523...22,735,129
Ensembl chr26:22,726,526...22,735,125 		JBrowse link
G NEFL neurofilament light chain ISO RGD PMID:2108255 RGD:9698442 NCBI chr25:32,463,361...32,468,965
Ensembl chr25:32,463,452...32,467,224 		JBrowse link
G NEFM neurofilament medium chain ISO RGD PMID:2108255 RGD:9698442 NCBI chr25:32,493,517...32,498,615
Ensembl chr25:32,493,675...32,498,570 		JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr 4:20,654,824...20,657,816
Ensembl chr 4:20,656,791...20,657,438 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:16906226) MGI PMID:16906226 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:17353270) MGI PMID:17353270 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NOVA1 NOVA alternative splicing regulator 1 ISO RGD PMID:12124753 RGD:708602 NCBI chr 8:6,133,608...6,281,508
Ensembl chr 8:6,135,679...6,281,384 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:20195794 RGD:2325285
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO (PMID:19114063) MGI PMID:19114063 NCBI chr17:56,806,912...56,833,765 JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr 6:38,811,051...38,865,503
Ensembl chr 6:38,837,964...38,865,503 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438 		JBrowse link
G PLXDC1 plexin domain containing 1 ISO RGD PMID:20411127 RGD:2325872 NCBI chr 9:23,210,930...23,272,242
Ensembl chr 9:23,210,925...23,270,995 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:12124753 RGD:708602 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8453763 RGD:9831456 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:54,575,853...54,672,141
Ensembl chr20:54,575,895...54,672,068 		JBrowse link
G RAPGEF3 Rap guanine nucleotide exchange factor 3 ISO RGD PMID:18583150 RGD:9835386 NCBI chr27:6,993,452...7,030,372
Ensembl chr27:6,993,452...7,017,316 		JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:18583150 RGD:9835386 NCBI chr36:17,087,488...17,323,504
Ensembl chr36:17,087,488...17,323,220 		JBrowse link
G RNF2 ring finger protein 2 ISO RGD PMID:20515739 RGD:9491842 NCBI chr 7:18,240,672...18,283,091
Ensembl chr 7:18,236,115...18,281,387 		JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:10102268 RGD:68763 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO RGD PMID:10102268 RGD:68763 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G SLIT1 slit guidance ligand 1 ISO RGD PMID:10102268 RGD:68763 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 ISO RGD PMID:10102268 RGD:68763 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G SLIT3 slit guidance ligand 3 ISO RGD PMID:10102268 RGD:68763 NCBI chr 4:42,506,680...43,099,053
Ensembl chr 4:42,508,426...43,094,714 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G SOX12 SRY-box transcription factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:20,509,931...20,515,013
Ensembl chr24:20,513,567...20,514,532 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:20,098,783...20,101,357
Ensembl chr35:20,099,773...20,101,154 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit ISO RGD PMID:20515739 RGD:9491842 NCBI chr 9:40,992,797...41,038,729
Ensembl chr 9:40,994,825...41,038,645 		JBrowse link
G VIT vitrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,142,924...29,259,800
Ensembl chr17:29,143,069...29,243,406 		JBrowse link
G ZIC1 Zic family member 1 involved_in ISO (PMID:11944941) UniProt PMID:11944941
G ZPR1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:16,778,803...16,787,493
Ensembl chr 5:16,778,832...16,787,105 		JBrowse link
spinal cord dorsal/ventral patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRD chordin involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:21761479) MGI PMID:21761479 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (PMID:21209331) BHF-UCL PMID:21209331 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:21761479) MGI PMID:21761479 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G INTU inturned planar cell polarity protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:13,193,252...13,276,593
Ensembl chr19:13,164,245...13,276,496 		JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:16364285)
(PMID:15755804), (PMID:16364285)
(PMID:14603322) 		MGI PMID:14603322 PMID:15755804 PMID:16364285 NCBI chr12:24,388,530...24,438,956
Ensembl chr12:24,387,643...24,421,869 		JBrowse link
G RFX4 regulatory factor X4 acts_upstream_of_or_within ISO (PMID:19887680) MGI PMID:19887680 NCBI chr10:31,993,339...32,155,896
Ensembl chr10:31,994,594...32,155,500 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HOXC10 homeobox C10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:1,272,272...1,277,411
Ensembl chr27:1,273,131...1,323,370 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:19,924,352...19,927,706
Ensembl chr36:19,916,175...19,927,724 		JBrowse link
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G ISL2 ISL LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:19666821) MGI PMID:19666821
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G LMO4 LIM domain only 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058 		JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 involved_in
acts_upstream_of_or_within 		IEA
IBA
ISO 		(PMID:10482234) InterPro
GO_Central
MGI		 PMID:10482234 GO_REF:0000002 GO_REF:0000033 NCBI chr16:19,509,038...19,514,378
Ensembl chr16:19,499,582...19,512,836 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:11567614) MGI PMID:11567614 NCBI chr32:8,256,513...8,263,238
Ensembl chr32:8,256,254...8,262,004 		JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO (PMID:11567614) MGI PMID:11567614 NCBI chr28:40,568,948...40,570,240
Ensembl chr28:40,569,093...40,570,793 		JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within ISO (PMID:15769945) MGI PMID:15769945 NCBI chr 1:29,919,043...29,921,713
Ensembl chr 1:29,920,190...29,921,008 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:9230312) MGI PMID:9230312
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:19684112) MGI PMID:19684112 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
spinal cord motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABT1 activator of basal transcription 1 acts_upstream_of_or_within ISO (PMID:19299493) MGI PMID:19299493 NCBI chr35:24,357,502...24,360,731
Ensembl chr35:24,357,460...24,359,318 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:17156092) MGI PMID:17156092 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO (PMID:2061715) MGI PMID:2061715 NCBI chr37:30,863,098...30,885,831
Ensembl chr37:30,867,479...30,884,895 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO (PMID:21552265) MGI PMID:21552265 NCBI chr 5:28,566,604...28,727,416
Ensembl chr 5:28,388,664...28,727,334 		JBrowse link
G GBX1 gastrulation brain homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,195,705...15,213,425 JBrowse link
G GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO (PMID:21943603) MGI PMID:21943603 NCBI chr21:23,070,875...23,157,078
Ensembl chr21:23,070,964...23,156,532 		JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:44,317,540...44,453,761
Ensembl chr25:44,317,517...44,452,064 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IGHMBP2 immunoglobulin mu DNA binding protein 2 acts_upstream_of_or_within ISO (PMID:19299493) MGI PMID:19299493 NCBI chr18:49,063,748...49,090,625
Ensembl chr18:49,064,609...49,091,453 		JBrowse link
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G LBX1 ladybird homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486 		JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058 		JBrowse link
G LONRF2 LON peptidase N-terminal domain and ring finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:42,378,459...42,412,871
Ensembl chr10:42,378,475...42,410,076 		JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr 8:23,827,284...24,608,003
Ensembl chr 8:23,832,475...24,607,866 		JBrowse link
G MIR17 microRNA mir-17 acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr22:42,478,013...42,478,071
Ensembl chr22:42,478,000...42,478,083 		JBrowse link
G MIR18A microRNA mir-18a acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr22:42,478,138...42,478,229
Ensembl chr22:42,478,138...42,478,229 		JBrowse link
G MIR19A microRNA mir-19a acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr22:42,478,298...42,478,355
Ensembl chr22:42,478,285...42,478,366 		JBrowse link
G MIR19B-1 microRNA mir-19b-1 acts_upstream_of_or_within ISO (PMID:21741442) MGI PMID:21741442 NCBI chr22:42,478,598...42,478,656 JBrowse link
G MIR20A microRNA mir-20a acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr22:42,478,462...42,478,520
Ensembl chr22:42,478,462...42,478,520 		JBrowse link
G MIR92A-1 microRNA mir-92a-1 acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr22:42,478,714...42,478,772 JBrowse link
G NFE2L1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:24,344,697...24,356,918
Ensembl chr 9:24,346,585...24,362,646 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within ISO (PMID:15674731)
(PMID:15769945) 		MGI PMID:15674731 PMID:15769945 NCBI chr 1:29,919,043...29,921,713
Ensembl chr 1:29,920,190...29,921,008 		JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G SCYL1 SCY1 like pseudokinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:51,667,647...51,680,904
Ensembl chr18:51,667,790...51,681,090 		JBrowse link
G SCYL3 SCY1 like pseudokinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:28,751,604...28,796,042
Ensembl chr 7:28,751,707...28,795,756 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
spinal cord oligodendrocyte cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:702,974...721,340
Ensembl chr38:523,481...720,195 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in ISO (PMID:26525805) UniProt PMID:26525805 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549 		JBrowse link
spinal cord oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
spinal cord patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RELN reelin acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:14648677 GO_REF:0000107 RGD:2317803 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADARB1 adenosine deaminase RNA specific B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:38,715,529...38,799,353
Ensembl chr31:38,678,184...38,796,521 		JBrowse link
G DCC DCC netrin 1 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,788,833...22,494,849
Ensembl chr 1:21,793,328...22,494,967 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G ZSWIM6 zinc finger SWIM-type containing 6 involved_in ISO (PMID:28433741) UniProt PMID:28433741 NCBI chr 2:47,954,786...48,064,489
Ensembl chr 2:47,991,716...48,063,680 		JBrowse link
striatum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) RGD
MGI		 PMID:17360497 PMID:22015925 RGD:7248608 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:22015925 RGD:7248608 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:12815709 RGD:11536004 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:9886073) MGI PMID:9886073 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:11030759)
(PMID:17715336) 		MGI PMID:11030759 PMID:17715336 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18272292 RGD:13462055 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
G RARB retinoic acid receptor beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr23:18,207,253...18,931,128
Ensembl chr23:18,207,760...18,482,652 		JBrowse link
G SECISBP2 SECIS binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:96,879,840...96,927,583
Ensembl chr 1:96,880,369...96,933,862 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048 		JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 acts_upstream_of_or_within ISO (PMID:20418887) MGI PMID:20418887 NCBI chr22:39,381,201...39,390,728
Ensembl chr22:39,384,666...39,387,542 		JBrowse link
subpallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:23042297) MGI PMID:23042297 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
substantia nigra development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845 		JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr31:21,207,080...21,212,220
Ensembl chr31:21,200,337...21,215,975 		JBrowse link
G BASP1 brain abundant membrane attached signal protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:86,360,641...86,417,408
Ensembl chr 4:86,361,608...86,382,715 		JBrowse link
G CALM1 calmodulin 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195 		JBrowse link
G CALM2 calmodulin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457 		JBrowse link
G CALM3 calmodulin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391 		JBrowse link
G CCDC14 coiled-coil domain containing 14 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr33:26,958,752...27,009,159
Ensembl chr33:26,959,430...27,009,436 		JBrowse link
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079 		JBrowse link
G DYNLL1 dynein light chain LC8-type 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr26:16,369,878...16,402,302
Ensembl chr26:16,398,886...16,402,021
Ensembl chr26:16,398,886...16,402,021 		JBrowse link
G ENO3 enolase 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:31,662,284...31,667,498
Ensembl chr 5:31,662,285...31,834,968 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:17234579) MGI PMID:17234579 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G FGF9 fibroblast growth factor 9 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr25:16,630,321...16,665,935
Ensembl chr25:16,632,812...16,663,550 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:17234579) MGI PMID:17234579 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:122,217,317...122,231,862
Ensembl chr  X:122,205,683...122,231,678 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GNB4 G protein subunit beta 4 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr34:12,818,063...12,849,822
Ensembl chr34:12,822,104...12,876,865 		JBrowse link
G H2BC12 H2B clustered histone 12 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr35:24,556,368...24,558,216
Ensembl chr35:24,557,784...24,558,164 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257 		JBrowse link
G INA internexin neuronal intermediate filament protein alpha involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr28:15,670,919...15,685,080
Ensembl chr28:15,670,999...15,683,380 		JBrowse link
G LDHA lactate dehydrogenase A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr21:40,829,844...40,840,947 JBrowse link
G LOC100688796 ATP synthase F(0) complex subunit B1, mitochondrial involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:63,940,486...63,954,982
Ensembl chr 6:40,613,415...40,625,979
Ensembl chr 6:40,613,415...40,625,979 		JBrowse link
G LOC100855552 creatine kinase B-type involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 8:71,284,104...71,287,379 JBrowse link
G LOC403934 cell division cycle 42 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211 		JBrowse link
G LOC612644 cytochrome c oxidase subunit 6B1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:116,960,851...116,969,415 JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386 		JBrowse link
G MAOB monoamine oxidase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:37,765,810...37,883,955
Ensembl chr  X:37,765,813...37,883,955 		JBrowse link
G MAPKAP1 MAPK associated protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:57,447,115...57,699,979
Ensembl chr 9:57,446,832...57,699,950 		JBrowse link
G MBP myelin basic protein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:2,841,801...2,952,553
Ensembl chr 1:2,846,589...2,951,860 		JBrowse link
G NDRG2 NDRG family member 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr15:18,106,651...18,115,026
Ensembl chr15:18,106,654...18,113,970 		JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr18:42,069,402...42,075,843
Ensembl chr18:42,069,398...42,076,921 		JBrowse link
G PADI2 peptidyl arginine deiminase 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:81,116,031...81,147,889
Ensembl chr 2:81,116,140...81,145,043 		JBrowse link
G PLP1 proteolipid protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:77,191,112...77,207,772
Ensembl chr  X:77,191,150...77,205,964 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:73,372,391...73,393,148
Ensembl chr 4:73,385,566...73,452,033 		JBrowse link
G RHOA ras homolog family member A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215 		JBrowse link
G S100A1 S100 calcium binding protein A1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 7:43,428,819...43,432,637
Ensembl chr 7:43,428,820...43,433,459 		JBrowse link
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:49,027,190...49,060,858
Ensembl chr 9:49,031,669...49,060,848 		JBrowse link
G SIRT2 sirtuin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583 		JBrowse link
G SUDS3 SDS3 homolog, SIN3A corepressor complex component involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr26:14,716,759...14,749,475
Ensembl chr26:14,716,562...15,019,622 		JBrowse link
G SYNGR3 synaptogyrin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:38,941,933...38,944,110 JBrowse link
G SYPL2 synaptophysin like 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:42,377,528...42,391,765
Ensembl chr 6:42,380,144...42,385,102 		JBrowse link
G TTBK1 tau tubulin kinase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:11,738,466...11,774,663
Ensembl chr12:11,738,232...11,757,814 		JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:71,396,694...71,430,395
Ensembl chr 3:71,370,822...71,411,350 		JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:45,506,830...45,562,081
Ensembl chr 9:45,507,282...45,562,086 		JBrowse link
G YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr26:24,785,374...24,796,603
Ensembl chr26:24,785,368...24,795,778 		JBrowse link
G YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:6,660,504...6,697,954 JBrowse link
G ZNF148 zinc finger protein 148 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr33:28,229,270...28,347,939
Ensembl chr33:28,233,728...28,348,154 		JBrowse link
subthalamic nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:18206388) MGI PMID:18206388 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
subthalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr37:25,528,934...25,535,795
Ensembl chr37:25,529,151...25,530,263 		JBrowse link
superior temporal gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
G SLIT1 slit guidance ligand 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
telencephalon cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL12 C-X-C motif chemokine ligand 12 ISO RGD PMID:16971524 RGD:2306584 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:16971524 RGD:2306584 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G SLIT1 slit guidance ligand 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:14960623) MGI
UniProt		 PMID:14960623 GO_REF:0000117 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G TNR tenascin R acts_upstream_of_or_within ISO (PMID:15034584) MGI PMID:15034584 NCBI chr 7:23,721,227...24,125,183
Ensembl chr 7:24,019,095...24,122,530 		JBrowse link
telencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543 		JBrowse link
G AVPR1A arginine vasopressin receptor 1A ISO RGD PMID:11021977 RGD:2304223 NCBI chr10:6,266,217...6,269,662
Ensembl chr10:6,265,998...6,269,662 		JBrowse link
G AVPR2 arginine vasopressin receptor 2 ISO RGD PMID:11021977 RGD:2304223 NCBI chr  X:121,751,606...121,754,771
Ensembl chr  X:121,752,027...121,754,771 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G CDH2 cadherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:12571115 RGD:2290000 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426 		JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10024361 RGD:8662883 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321 		JBrowse link
G FEZF1 FEZ family zinc finger 1 involved_in ISO (PMID:20431123) UniProt PMID:20431123
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20431123) Ensembl
MGI		 PMID:20431123 GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GMPPA GDP-mannose pyrophosphorylase A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr37:26,010,531...26,017,798
Ensembl chr37:26,010,638...26,017,787 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983) MGI PMID:19036983 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G NRGN neurogranin ISO RGD PMID:8783271 RGD:9835396 NCBI chr 5:9,673,107...9,679,819
Ensembl chr 5:9,673,809...9,679,799 		JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:11021977 RGD:2304223 NCBI chr20:9,358,797...9,382,308
Ensembl chr20:9,358,916...9,378,343 		JBrowse link
G PFDN1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chr 2:35,454,139...35,519,818
Ensembl chr 2:35,454,404...35,519,725 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G PLXNA4 plexin A4 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G RFX4 regulatory factor X4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:31,993,339...32,155,896
Ensembl chr10:31,994,594...32,155,500 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560 		JBrowse link
G SIX3 SIX homeobox 3 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:18694563) UniProt
Ensembl		 PMID:18694563 GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SLC1A2 solute carrier family 1 member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:32,565,258...32,717,052
Ensembl chr18:32,565,258...32,709,225 		JBrowse link
G SLC8A1 solute carrier family 8 member A1 ISO RGD PMID:12502534 RGD:2316981 NCBI chr17:32,004,207...32,381,399
Ensembl chr17:32,005,245...32,307,700 		JBrowse link
G SLC8A2 solute carrier family 8 member A2 ISO RGD PMID:12502534 RGD:2316981 NCBI chr 1:108,544,825...108,575,894
Ensembl chr 1:108,544,509...108,575,891 		JBrowse link
G SLC8A3 solute carrier family 8 member A3 ISO RGD PMID:11036162 RGD:2316983 NCBI chr 8:43,780,363...43,926,142
Ensembl chr 8:43,781,120...43,926,343 		JBrowse link
G TCTN1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:8,411,429...8,444,640
Ensembl chr26:8,407,105...8,437,027 		JBrowse link
telencephalon regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:26166575) MGI PMID:26166575 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:9811591 GO_REF:0000107 RGD:2306311 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SIX3 SIX homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
thalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:23527305) MGI PMID:23527305 NCBI chr 1:112,325,988...112,346,056
Ensembl chr 1:112,325,289...112,346,916 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G KIAA0319 KIAA0319 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr35:22,589,103...22,689,549
Ensembl chr35:22,591,353...22,652,292 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:1,637,007...1,666,790
Ensembl chr10:1,636,932...1,664,767 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15342729) MGI PMID:15342729 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G NCAM1 neural cell adhesion molecule 1 ISO RGD PMID:17292800 RGD:2326015 NCBI chr 5:19,895,587...20,192,334
Ensembl chr 5:19,895,613...20,191,995 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr31:27,674,112...27,677,521
Ensembl chr31:27,674,107...27,676,822 		JBrowse link
G PTCHD1 patched domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:19,096,787...19,153,367
Ensembl chr  X:19,096,559...19,148,528 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:10051750 RGD:10043838 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
G TAL2 TAL bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:11071772) MGI PMID:11071772 NCBI chr11:61,425,927...61,484,525
Ensembl chr11:61,456,727...61,482,348 		JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572 		JBrowse link
third ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:32,548,591...32,553,911
Ensembl chr 5:32,549,167...32,553,504 		JBrowse link
G C27H12orf57 chromosome 27 C12orf57 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,101,705...38,103,553
Ensembl chr27:38,101,786...38,127,910
Ensembl chr27:38,101,786...38,127,910 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,201,302...14,219,121
Ensembl chr28:14,201,351...14,219,121 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
thyroid-stimulating hormone-secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:9463347) MGI PMID:9463347 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111 		JBrowse link
vagus nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAV2 neuron navigator 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:41,458,280...42,181,227
Ensembl chr21:41,458,984...42,177,813 		JBrowse link
vagus nerve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA4 plexin A4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:20939858) MGI PMID:20939858 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
ventral midline determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
ventral midline development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
ventral spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 involved_in ISO (PMID:20711475) UniProt PMID:20711475 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336 		JBrowse link
G DCTN1 dynactin subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,728,096...48,759,187
Ensembl chr17:48,728,270...48,759,147 		JBrowse link
G FOXP1 forkhead box P1 involved_in ISO (PMID:20711475) UniProt PMID:20711475 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LRP8 LDL receptor related protein 8 involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G VLDLR very low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:91,242,010...91,277,030
Ensembl chr 1:91,241,509...91,272,495 		JBrowse link
G VSTM5 V-set and transmembrane domain containing 5 involved_in ISO (PMID:25826454) UniProt PMID:25826454 NCBI chr21:6,928,557...6,960,603
Ensembl chr21:6,928,126...6,960,202 		JBrowse link
ventral spinal cord interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXN4 forkhead box N4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058 		JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940 		JBrowse link
G FOXN4 forkhead box N4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602 		JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874 		JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:42,207,205...42,214,954
Ensembl chr21:42,208,346...42,212,415 		JBrowse link
G DMRT3 doublesex and mab-3 related transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:89,798,215...89,813,140
Ensembl chr 1:89,798,100...89,812,328 		JBrowse link
G EVX1 even-skipped homeobox 1 acts_upstream_of_or_within ISO (PMID:11239430) MGI PMID:11239430 NCBI chr14:40,416,167...40,422,412
Ensembl chr14:40,418,589...40,423,482 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:9230312) MGI PMID:9230312
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:20844123) MGI PMID:20844123 NCBI chr22:59,902,113...59,903,820 JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:19684112) MGI PMID:19684112 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
ventricular system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK8 adenylate kinase 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:51,470,688...51,598,787
Ensembl chr 9:51,470,756...51,598,786 		JBrowse link
G ANP32B acidic nuclear phosphoprotein 32 family member B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:55,230,017...55,272,744
Ensembl chr11:55,243,854...55,350,194 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,547,638...42,573,407
Ensembl chr 6:42,548,983...42,573,962 		JBrowse link
G CENPF centromere protein F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:12,558,455...12,618,637
Ensembl chr 7:12,555,143...12,617,996 		JBrowse link
G CORO1C coronin 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:18,161,707...18,236,654
Ensembl chr26:18,176,441...18,236,652 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr28:14,201,302...14,219,121
Ensembl chr28:14,201,351...14,219,121 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:76,743,872...77,104,888
Ensembl chr 5:76,743,972...77,045,455 		JBrowse link
G KIF27 kinesin family member 27 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:75,554,024...75,638,421
Ensembl chr 1:75,553,751...75,637,456 		JBrowse link
G LOC607539 armadillo repeat-containing protein 4-like acts_upstream_of_or_within ISO (PMID:23849778) MGI PMID:23849778 NCBI chr 2:4,769,681...5,037,592 JBrowse link
G MBOAT7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:103,028,000...103,040,299
Ensembl chr 1:103,028,002...103,040,167 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G MNAT1 MNAT1 component of CDK activating kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:35,747,883...35,946,353
Ensembl chr 8:35,756,933...35,946,353 		JBrowse link
G NME5 NME/NM23 family member 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:56,133,094...56,353,609
Ensembl chr15:56,174,578...56,352,569 		JBrowse link
G SEMA6D semaphorin 6D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr30:13,489,896...14,059,623
Ensembl chr30:14,005,124...14,057,202 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:19732765) MGI PMID:19732765 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674 		JBrowse link
G TTN titin acts_upstream_of_or_within ISO (PMID:17360664) MGI PMID:17360664 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545 		JBrowse link
G WDR89 WD repeat domain 89 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:38,121,649...38,157,178
Ensembl chr 8:38,121,798...38,122,961 		JBrowse link
ventricular zone neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCT dopachrome tautomerase involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr22:45,271,709...45,305,272
Ensembl chr22:45,271,709...45,305,346 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
vertebrate eye-specific patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,668,086...76,671,082
Ensembl chr 2:76,668,217...76,670,977 		JBrowse link
G C3 complement C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,566,226...53,598,365
Ensembl chr20:53,566,261...53,598,761 		JBrowse link
G ITGAM integrin subunit alpha M involved_in ISO (PMID:22632727) ARUK-UCL PMID:22632727 NCBI chr 6:16,944,062...16,996,525
Ensembl chr 6:16,808,971...16,996,286 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:8719615) MGI PMID:8719615 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032 		JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:11223304) MGI PMID:11223304 NCBI chr31:29,858,428...29,868,315 JBrowse link
visceral motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G ISL2 ISL LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:14766174) MGI PMID:14766174
G TBX20 T-box transcription factor 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507 		JBrowse link
Wnt signaling pathway involved in forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270)
(PMID:14715945) 		MGI PMID:14715945 PMID:16920270 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22194
    developmental process 7053
      anatomical structure development 6586
        system development 4630
          central nervous system development 1247
            astrocyte differentiation + 102
            brain development + 918
            central nervous system maturation + 9
            central nervous system morphogenesis + 4
            central nervous system neuron differentiation + 305
            central nervous system segmentation + 5
            establishment of blood-brain barrier + 21
            larval central nervous system remodeling 0
            microglia differentiation + 20
            oligodendrocyte differentiation + 150
            preganglionic parasympathetic fiber development + 20
            spinal cord development + 147
            ventral cord development 0
            ventral midline development + 5
            vertebrate eye-specific patterning 3
Path 2
Term Annotations click to browse term
  biological_process 22194
    developmental process 7053
      anatomical structure development 6586
        multicellular organism development 5316
          system development 4630
            nervous system development 2906
              central nervous system development 1247
                astrocyte differentiation + 102
                brain development + 918
                central nervous system maturation + 9
                central nervous system morphogenesis + 4
                central nervous system neuron differentiation + 305
                central nervous system segmentation + 5
                establishment of blood-brain barrier + 21
                larval central nervous system remodeling 0
                microglia differentiation + 20
                oligodendrocyte differentiation + 150
                preganglionic parasympathetic fiber development + 20
                spinal cord development + 147
                ventral cord development 0
                ventral midline development + 5
                vertebrate eye-specific patterning 3
paths to the root