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ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development



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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:51,995,100...52,031,812
Ensembl chr 3:51,969,779...52,031,544
JBrowse link
G ADGRA2 adhesion G protein-coupled receptor A2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:27,547,722...27,583,069
Ensembl chr16:27,549,308...27,583,070
JBrowse link
G ALDH3A2 aldehyde dehydrogenase 3 family member A2 involved_in ISO (PMID:8528251) UniProt PMID:8528251 NCBI chr 5:40,515,768...40,641,377
Ensembl chr 5:40,515,030...40,641,463
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,560,005...22,590,996
Ensembl chr35:22,560,008...22,587,875
JBrowse link
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:379,443...405,101
Ensembl chr26:379,346...403,474
JBrowse link
G APLP1 amyloid beta precursor like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:116,774,392...116,783,101
Ensembl chr 1:116,728,529...116,783,046
JBrowse link
G APP amyloid beta precursor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,005,106...57,139,585
Ensembl chr 3:57,008,570...57,159,713
JBrowse link
G B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO (PMID:11384981) UniProt PMID:11384981 NCBI chr34:16,208,518...16,228,592
Ensembl chr34:16,225,002...16,226,147
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627
JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11823447) Ensembl
MGI
PMID:11823447 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733
JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370
JBrowse link
G CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17067568) Ensembl
MGI
PMID:17067568 GO_REF:0000107 NCBI chr28:7,416,022...7,424,173 JBrowse link
G DAZAP1 DAZ associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:57,411,249...57,435,852
Ensembl chr20:57,411,825...57,435,799
JBrowse link
G DHX30 DExH-box helicase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,102,064...41,131,464
Ensembl chr20:41,102,080...41,129,429
JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,931,272...13,939,650
Ensembl chr15:13,934,530...13,953,408
JBrowse link
G DNER delta/notch like EGF repeat containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:41,709,570...41,887,705
Ensembl chr25:41,710,420...42,019,885
JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:48,110,521...48,117,175
Ensembl chr 8:48,110,050...48,116,686
JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,415,229...29,507,159
Ensembl chr25:29,415,924...29,507,098
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118
G EMX2 empty spiracles homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035
JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20675713) Ensembl
MGI
PMID:20675713 GO_REF:0000107 NCBI chr 1:109,166,527...109,177,393
Ensembl chr 1:109,168,644...109,178,319
JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within ISO (PMID:17005728) MGI PMID:17005728 NCBI chr13:42,889,100...42,958,604
Ensembl chr13:42,897,655...42,959,206
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18346921) Ensembl
MGI
PMID:18346921 GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628)
(PMID:12435629)
Ensembl
MGI
PMID:12435628 PMID:12435629 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11787818) Ensembl
MGI
PMID:11787818 GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11731457), (PMID:12724834) Ensembl
MGI
PMID:11731457 PMID:12724834 GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:52,033,985...52,052,572
Ensembl chr 3:52,033,991...52,051,617
JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:43,932,364...43,940,438
Ensembl chr20:43,933,769...43,938,262
JBrowse link
G HELT helt bHLH transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16968817) Ensembl
MGI
PMID:16968817 GO_REF:0000107 NCBI chr16:45,564,986...45,567,225
Ensembl chr16:45,565,131...45,566,884
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290
JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in ISO (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chr 2:75,880,659...75,881,786
Ensembl chr 2:75,880,657...75,882,010
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9875844)
(PMID:9889105)
(PMID:10911993)
Ensembl
MGI
PMID:9875844 PMID:9889105 PMID:10911993 GO_REF:0000107 NCBI chr22:56,980,333...56,987,636
Ensembl chr22:56,980,622...56,983,357
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302) Ensembl
MGI
PMID:15148302 GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049
JBrowse link
G LOC100684983 cytochrome c oxidase subunit 7B, mitochondrial involved_in ISO (PMID:23122588) UniProt PMID:23122588 NCBI chr  X:60,192,698...60,197,547 JBrowse link
G LOC102156482 RNA-binding protein Musashi homolog 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:47,983,095...47,985,359 JBrowse link
G LOC119869994 MARCKS-related protein-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119875993 MARCKS-related protein-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119876942 RNA-binding protein Musashi homolog 2-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119879078 MARCKS-related protein involved_in IEA TreeGrafter GO_REF:0000118
G MARCKSL1 MARCKS like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:68,898,750...68,901,139
Ensembl chr 2:68,892,492...68,901,031
JBrowse link
G MIR124-1 microRNA mir-124-1 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr25:28,188,264...28,188,322
Ensembl chr25:28,188,250...28,188,334
JBrowse link
G MIR124-2 microRNA mir-124-2 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr29:14,264,389...14,264,445 JBrowse link
G MIR124-3 microRNA mir-124-3 acts_upstream_of_or_within ISO (PMID:17403776) MGI PMID:17403776 NCBI chr24:46,916,732...46,916,789
Ensembl chr24:46,916,720...46,916,800
JBrowse link
G MSI1 musashi RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:16,266,302...16,288,980
Ensembl chr26:16,266,586...16,289,012
JBrowse link
G MSI2 musashi RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:32,017,951...32,409,457 JBrowse link
G NCAN neurocan involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:43,944,257...43,970,864
Ensembl chr20:43,945,143...43,970,886
JBrowse link
G NDN necdin, MAGE family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15649943) Ensembl
MGI
PMID:15649943 GO_REF:0000107 NCBI chr 3:36,313,977...36,315,661
Ensembl chr 3:36,314,104...36,315,081
JBrowse link
G NGFR nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11978834) Ensembl
MGI
PMID:11978834 GO_REF:0000107 NCBI chr 9:25,598,468...25,621,021
Ensembl chr 9:25,601,074...25,623,274
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10688202) Ensembl
MGI
PMID:10688202 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:12,264,063...12,477,247
Ensembl chr18:12,264,063...12,475,230
JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:12652306)
(PMID:11731459)
MGI PMID:11731459 PMID:12652306 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861161|PMID:10854042) Ensembl
UniProt
PMID:10854042 GO_REF:0000107 MGI:1861161 NCBI chr20:55,529,841...55,553,604
Ensembl chr20:55,524,443...55,553,525
JBrowse link
G PTEN phosphatase and tensin homolog involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:12091320) UniProt
MGI
PMID:12091320 GO_REF:0000024 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11900467) Ensembl
MGI
InterPro
PMID:11900467 GO_REF:0000002 GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875
JBrowse link
G RUNX1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO (PMID:16174759) MGI PMID:16174759 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839
JBrowse link
G SEMA6B semaphorin 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,151,913...55,173,434
Ensembl chr20:55,161,818...55,173,135
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
MGI
UniProt
PMID:12435628 GO_REF:0000107 GO_REF:0000117 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SLC2A1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (PMID:10227690), (PMID:1714544) ARUK-UCL PMID:1714544 PMID:10227690 NCBI chr15:463,307...493,145
Ensembl chr15:463,237...493,140
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435628) Ensembl
TreeGrafter
MGI
PMID:12435628 GO_REF:0000107 GO_REF:0000118 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:55,429,989...55,571,917
Ensembl chr10:55,429,940...55,571,916
JBrowse link
G STK3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chr13:647,363...920,887
Ensembl chr13:648,216...920,847
JBrowse link
G STK4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19786569) Ensembl
MGI
PMID:19786569 GO_REF:0000107 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19624305) Ensembl
MGI
PMID:19624305 GO_REF:0000107 NCBI chr15:16,729,068...16,780,549
Ensembl chr15:16,728,758...16,780,325
JBrowse link
G THOC6 THO complex subunit 6 involved_in ISO (PMID:23621916) UniProt PMID:23621916 NCBI chr 6:38,161,506...38,164,287
Ensembl chr 6:38,161,474...38,164,402
JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chr28:13,807,428...13,813,875
Ensembl chr28:13,807,720...13,813,849
JBrowse link
G TLX3 T cell leukemia homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12023301) Ensembl
MGI
PMID:12023301 GO_REF:0000107 NCBI chr 4:40,816,351...40,818,582
Ensembl chr 4:40,816,467...40,818,723
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16199867) Ensembl
MGI
PMID:16199867 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chr 7:40,296,278...40,329,818
Ensembl chr 7:40,252,697...40,329,828
JBrowse link
G TPP1 tripeptidyl peptidase 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr21:29,921,764...29,926,974
Ensembl chr21:29,921,764...29,926,986
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10601036)
(PMID:10601035)
Ensembl
TreeGrafter
MGI
PMID:10601035 PMID:10601036 GO_REF:0000107 GO_REF:0000118 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717
JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,101,226...1,834,933
Ensembl chr13:1,101,610...1,871,225
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28675177) Ensembl
MGI
PMID:28675177 GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chr 3:24,316,598...24,547,463
Ensembl chr 3:24,269,974...24,533,465
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:19,082,594...19,284,360
Ensembl chr 5:19,087,154...19,267,628
JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16598713) Ensembl
MGI
PMID:16598713 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122
JBrowse link
G ZIC1 Zic family member 1 acts_upstream_of_or_within ISO (PMID:11756505)
(PMID:9412507)
MGI PMID:9412507 PMID:11756505
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:11756505) MGI PMID:11756505 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055
JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9140068) Ensembl
MGI
PMID:9140068 GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241
JBrowse link
G GHRH growth hormone releasing hormone involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15985453) Ensembl
MGI
PMID:15985453 GO_REF:0000107 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G GHRHR growth hormone releasing hormone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1270792), (PMID:1329576), (PMID:1504465) Ensembl
MGI
PMID:1270792 PMID:1329576 PMID:1504465 GO_REF:0000107 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753
JBrowse link
G GSX1 GS homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8631293) Ensembl
MGI
PMID:8631293 GO_REF:0000107 NCBI chr25:11,853,483...11,855,169
Ensembl chr25:11,853,462...11,855,445
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18996108) Ensembl
MGI
PMID:18996108 GO_REF:0000107
G POU1F1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chr31:769,454...788,761
Ensembl chr31:769,487...787,626
JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chr11:2,739,958...2,742,576
Ensembl chr11:2,739,958...2,743,533
JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9247269) Ensembl
MGI
PMID:9247269 GO_REF:0000107 NCBI chr34:11,209,118...11,245,456
Ensembl chr34:11,210,939...11,246,742
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr34:14,853,000...14,855,153 JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUOX2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chr30:11,521,833...11,541,719
Ensembl chr30:11,521,845...11,541,716
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,604,878...55,684,666
Ensembl chr 5:55,604,878...55,699,736
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:22,023,176...22,080,656
Ensembl chr38:22,023,221...22,080,604
JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12527005) Ensembl
MGI
PMID:12527005 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416
JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24441682) Ensembl
MGI
PMID:24441682 GO_REF:0000107 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900
JBrowse link
G UBA6 ubiquitin like modifier activating enzyme 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23499007) Ensembl
MGI
PMID:23499007 GO_REF:0000107 NCBI chr13:58,148,935...58,231,194
Ensembl chr13:58,013,212...58,231,200
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387
JBrowse link
G FBXO45 F-box protein 45 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19398581) Ensembl
MGI
PMID:19398581 GO_REF:0000107 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189
JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11997145) Ensembl
MGI
PMID:11997145 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998
JBrowse link
G PLXNA4 plexin A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15814794) Ensembl
MGI
PMID:15814794 GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
ISO (MGI:5467661|PMID:23206892)
(PMID:21055390)
UniProt
MGI
PMID:21055390 PMID:23206892 MGI:5467661 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598
JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G BACE2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr31:35,714,003...35,760,686
Ensembl chr31:35,713,149...35,760,681
JBrowse link
G C1QA complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,668,086...76,671,082
Ensembl chr 2:76,668,217...76,670,977
JBrowse link
G C5AR1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,659,637...108,704,217
Ensembl chr 1:108,659,637...108,675,401
JBrowse link
G CNTF ciliary neurotrophic factor involved_in ISO
IEA
spinal cord astrocytes RGD
TreeGrafter
PMID:11771938 GO_REF:0000118 RGD:1626172 NCBI chr18:37,758,148...37,765,698 JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631
JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chr 1:29,646,776...29,669,669
Ensembl chr 1:29,647,552...29,669,578
JBrowse link
G IL1B interleukin 1 beta acts_upstream_of_or_within ISO (PMID:28377412) MGI PMID:28377412 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458
JBrowse link
G MT2A metallothionein 1H ISO RGD PMID:19837066 RGD:6483825 NCBI chr 2:59,607,926...59,608,825
Ensembl chr 2:59,607,927...59,626,727
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26607664) Ensembl
MGI
PMID:26607664 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23680462) Ensembl
MGI
PMID:23680462 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G GRN granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chr 9:19,077,430...19,085,443
Ensembl chr 9:19,077,427...19,082,268
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chr10:1,260,256...1,341,705
Ensembl chr10:1,260,719...1,352,271
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287
JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,038,163...17,047,390
Ensembl chr34:17,038,203...17,046,928
JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11487638) Ensembl
MGI
PMID:11487638 GO_REF:0000107 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461
JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19907020) Ensembl
MGI
PMID:19907020 GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523
JBrowse link
G LAMC3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19907020) Ensembl
MGI
PMID:19907020 GO_REF:0000107 NCBI chr 9:52,970,313...53,028,817
Ensembl chr 9:52,970,306...53,028,821
JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24038504) Ensembl
MGI
PMID:24038504 GO_REF:0000107 NCBI chr  X:77,191,112...77,207,772
Ensembl chr  X:77,191,150...77,205,964
JBrowse link
G ROR1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 5:46,010,097...46,477,882
Ensembl chr 5:46,013,195...46,190,880
JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151
JBrowse link
G S100A8 S100 calcium binding protein A8 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr 7:43,540,667...43,541,604
Ensembl chr 7:43,501,989...43,541,604
JBrowse link
G S100A9 S100 calcium binding protein A9 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chr 7:43,566,993...43,570,074 JBrowse link
G TLR4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22577135) Ensembl
MGI
PMID:22577135 GO_REF:0000107 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chr17:52,692,744...52,749,048
Ensembl chr17:52,694,603...52,744,276
JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 ISO RGD PMID:17141959 RGD:2303044 NCBI chr 6:27,855,702...27,950,140
Ensembl chr 6:27,855,702...27,989,331
JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:15882580) Ensembl
MGI
PMID:15882580 GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:92,489,981...92,538,199
Ensembl chr  X:92,491,114...92,537,672
JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336
JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,038,163...17,047,390
Ensembl chr34:17,038,203...17,046,928
JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896
JBrowse link
G GAP43 growth associated protein 43 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15234344) Ensembl
MGI
PMID:15234344 GO_REF:0000107 NCBI chr33:19,668,491...19,770,509
Ensembl chr33:19,656,835...19,770,408
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388
JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr 5:14,767,306...14,775,205
Ensembl chr 5:14,767,666...14,775,082
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr10:8,348,101...8,491,435 JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787
JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chr26:23,400,226...23,418,538
Ensembl chr26:23,403,364...23,406,851
JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chr19:12,905,336...13,030,901
Ensembl chr19:12,982,394...13,020,083
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr17:11,720,857...11,724,308 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12111813) Ensembl
MGI
PMID:12111813 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of ISO (PMID:11297510)
(PMID:10442636), (PMID:9878702)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382
JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within
ISO (PMID:29106906)
(PMID:21800304)
MGI PMID:21800304 PMID:29106906 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788
JBrowse link
G NKX2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19258013) Ensembl
MGI
PMID:19258013 GO_REF:0000107 NCBI chr24:1,933,176...1,935,875
Ensembl chr24:1,925,013...1,935,874
JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:14702088) Ensembl
MGI
PMID:14702088 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755
JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19258013) RGD
MGI
Ensembl
PMID:19258013 PMID:22944581 GO_REF:0000107 RGD:8552357
G S100B S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chr31:39,783,990...39,788,289
Ensembl chr31:39,784,506...39,788,183
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10357934) Ensembl
MGI
PMID:10357934 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SOX6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15590934) Ensembl
MGI
PMID:15590934 GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717
JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,598,373...63,676,753
Ensembl chr10:63,599,229...63,676,747
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCM1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14573516) Ensembl
MGI
PMID:14573516 GO_REF:0000107 NCBI chr12:20,623,593...20,642,861
Ensembl chr12:20,623,717...20,640,193
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19490914) Ensembl
MGI
PMID:19490914 GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20980600) Ensembl
MGI
PMID:20980600 GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 7:20,696,659...20,735,362
Ensembl chr 7:20,700,144...20,727,410
JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10816608) Ensembl
MGI
PMID:10816608 GO_REF:0000107 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461
JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:24062445) Ensembl
MGI
PMID:24062445 GO_REF:0000107 NCBI chr 7:882,672...887,679
Ensembl chr 7:883,279...887,811
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425
JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21319224) Ensembl
MGI
PMID:21319224 GO_REF:0000107 NCBI chr 5:52,924,443...53,006,298
Ensembl chr 5:52,923,833...53,005,493
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10375501) Ensembl
MGI
PMID:10375501 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chr36:11,009,362...11,086,586
Ensembl chr36:11,010,296...11,086,674
JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AATK apoptosis associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:22573681) MGI PMID:22573681 NCBI chr 9:911,461...923,508
Ensembl chr 9:910,633...923,542
JBrowse link
G ABCB6 ATP binding cassette subfamily B member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,760,478...25,767,753
Ensembl chr37:25,760,477...25,769,841
JBrowse link
G ABR ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chr 9:44,634,117...44,821,454
Ensembl chr 9:44,681,411...44,819,249
JBrowse link
G ACHE acetylcholinesterase ISO RGD PMID:20147288 RGD:405855864 NCBI chr 6:8,874,747...8,879,926
Ensembl chr 6:8,873,584...8,879,702
JBrowse link
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,805,737...58,842,618
Ensembl chr 2:58,805,834...58,852,684
JBrowse link
G AFG2A AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) UniProt PMID:26299366 NCBI chr19:17,020,337...17,371,396
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chr 8:65,136,750...65,213,589
Ensembl chr 8:65,136,705...65,213,555
JBrowse link
G ALK ALK receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17487225) Ensembl
MGI
PMID:17487225 GO_REF:0000107 NCBI chr17:23,010,308...23,688,841
Ensembl chr17:23,010,308...23,688,841
JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:8,223,627...8,247,976
Ensembl chr26:8,223,616...8,247,976
JBrowse link
G APAF1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9753321) Ensembl
MGI
PMID:9753321 GO_REF:0000107 NCBI chr15:38,026,893...38,160,842
Ensembl chr15:38,028,132...38,114,987
JBrowse link
G APOD apolipoprotein D involved_in IEA InterPro GO_REF:0000002 NCBI chr33:30,490,149...30,504,804
Ensembl chr33:30,488,135...30,509,289
JBrowse link
G ARL6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chr33:4,797,944...4,857,566
Ensembl chr33:4,800,917...4,839,635
JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,005,106...57,139,585
Ensembl chr 3:57,008,570...57,159,713
JBrowse link
G ASPM assembly factor for spindle microtubules involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20823249) Ensembl
MGI
PMID:20823249 GO_REF:0000107 NCBI chr 7:5,591,530...5,663,673
Ensembl chr 7:5,590,957...5,660,919
JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207
JBrowse link
G ATOH1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406
JBrowse link
G ATXN1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chr35:15,458,498...15,863,829
Ensembl chr35:15,452,135...15,649,747
JBrowse link
G ATXN1L ataxin 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:77,616,484...77,627,411
Ensembl chr 5:77,619,861...77,621,924
JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chr25:8,815,681...8,938,899
Ensembl chr25:8,817,628...8,939,249
JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19265195) Ensembl
MGI
PMID:19265195 GO_REF:0000107 NCBI chr15:16,272,051...16,281,028
Ensembl chr15:16,255,986...16,281,165
JBrowse link
G BAG6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,126,730...1,141,978
Ensembl chr12:1,126,732...1,137,896
JBrowse link
G BBS7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22228099) Ensembl
MGI
PMID:22228099 GO_REF:0000107 NCBI chr19:18,280,487...18,319,128
Ensembl chr19:18,280,520...18,315,825
JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11684658) Ensembl
MGI
PMID:11684658 GO_REF:0000107 NCBI chr26:27,856,280...27,980,923
Ensembl chr26:27,856,082...27,978,318
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7926765) Ensembl
MGI
PMID:7926765 GO_REF:0000107 NCBI chr 2:10,818,232...10,828,473
Ensembl chr 2:10,818,232...10,833,613
JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,586,107...12,703,296
Ensembl chr 9:12,590,333...12,703,422
JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815
JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,625,011...72,794,641
Ensembl chr11:72,628,582...72,764,077
JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657
JBrowse link
G CCDC141 coiled-coil domain containing 141 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:22,437,363...22,626,200
Ensembl chr36:22,492,052...22,625,957
JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29317443) Ensembl
MGI
PMID:29317443 GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CDH2 cadherin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569
JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:73,548,003...73,693,044
Ensembl chr11:73,548,038...73,690,199
JBrowse link
G CERS1 ceramide synthase 1 acts_upstream_of_or_within ISO (PMID:15248193) MGI PMID:15248193 NCBI chr20:44,216,568...44,231,820 JBrowse link
G CFAP43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31004071) Ensembl
MGI
PMID:31004071 GO_REF:0000107 NCBI chr28:16,443,417...16,555,027
Ensembl chr28:16,443,389...16,555,792
JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27602517) Ensembl
MGI
PMID:27602517 GO_REF:0000107 NCBI chr15:18,430,601...18,492,564
Ensembl chr15:18,431,019...18,491,920
JBrowse link
G CIC capicua transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,081,775...112,105,093
Ensembl chr 1:112,082,265...112,105,082
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,327,104...56,332,608
Ensembl chr  X:56,327,182...56,332,047
JBrowse link
G CLN5 CLN5 intracellular trafficking protein involved_in ISS UniProt GO_REF:0000024 NCBI chr22:30,568,572...30,575,890
Ensembl chr22:30,568,572...30,575,890
JBrowse link
G CNTN1 contactin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:12,655,021...13,005,536
Ensembl chr27:12,657,287...12,920,315
JBrowse link
G CNTN2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621
JBrowse link
G CNTN4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr20:14,354,148...15,277,202
Ensembl chr20:14,356,710...14,954,367
JBrowse link
G CNTN6 contactin 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:15,903,412...16,175,131
Ensembl chr20:15,903,591...16,175,319
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:47,474,488...47,490,951
Ensembl chr 9:47,473,901...47,490,252
JBrowse link
G CWH43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chr13:44,724,127...44,782,788
Ensembl chr13:44,724,131...44,782,804
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:12183377) GO_Central
MGI
PMID:12183377 GO_REF:0000033 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047
JBrowse link
G DCX doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827
JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr 4:22,916,718...22,918,893
Ensembl chr 4:22,916,096...22,964,035
JBrowse link
G DHX37 DEAH-box helicase 37 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:4,964,038...4,993,932
Ensembl chr26:4,964,088...4,993,930
JBrowse link
G DIAPH1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chr 2:36,483,781...36,581,390
Ensembl chr 2:36,485,571...36,581,320
JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,931,272...13,939,650
Ensembl chr15:13,934,530...13,953,408
JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr30:17,156,077...17,308,641
Ensembl chr30:17,156,791...17,308,803
JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,595,233...6,596,440
Ensembl chr 6:6,595,294...6,595,974
JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,839,504...16,187,465
Ensembl chr 5:15,826,726...16,186,880
JBrowse link
G EML1 EMAP like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,139,741...68,295,363
Ensembl chr 8:68,216,857...68,294,080
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12091317)
(PMID:12561075)
Ensembl
MGI
PMID:12091317 PMID:12561075 GO_REF:0000107
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12091317)
(PMID:12196586), (PMID:12209834), (PMID:12561075)
Ensembl
MGI
PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035
JBrowse link
G EOMES eomesodermin involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527
JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,134,775...52,305,163
Ensembl chr12:52,137,605...52,305,162
JBrowse link
G EPOR erythropoietin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11807041) Ensembl
MGI
PMID:11807041 GO_REF:0000107 NCBI chr20:49,945,777...49,950,856
Ensembl chr20:49,945,777...49,950,856
JBrowse link
G ESR2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:14605369) Ensembl
MGI
PMID:14605369 GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12682014) Ensembl
MGI
PMID:12682014 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834)
(PMID:23591631)
(PMID:20675713)
Ensembl
MGI
PMID:20675713 PMID:23591631 PMID:26306834 GO_REF:0000107 NCBI chr 1:109,166,527...109,177,393
Ensembl chr 1:109,168,644...109,178,319
JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr11:61,394,002...61,462,056
Ensembl chr11:61,405,034...61,461,396
JBrowse link
G FLVCR2 FLVCR heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chr 8:48,588,294...48,640,339
Ensembl chr 8:48,587,863...48,653,488
JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:9635428)
(PMID:4784576), (PMID:5500588)
MGI PMID:4784576 PMID:5500588 PMID:9635428
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756
JBrowse link
G FOXR1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chr 5:14,852,381...14,861,364
Ensembl chr 5:14,852,205...14,861,728
JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764
JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr 5:63,589,196...63,609,014
Ensembl chr 5:63,573,941...63,619,476
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:43,676,707...43,686,566
Ensembl chr 9:43,677,899...43,693,177
JBrowse link
G GIT2 GIT ArfGAP 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr26:17,170,651...17,217,634
Ensembl chr26:17,170,680...17,214,631
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12435361), (PMID:17395647)
(PMID:8026071)
Ensembl
MGI
PMID:8026071 PMID:12435361 PMID:17395647 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,969,781...8,379,657
Ensembl chr 2:7,971,800...8,378,198
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21377456) Ensembl
TreeGrafter
MGI
PMID:21377456 GO_REF:0000107 GO_REF:0000118 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096
JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12930780) Ensembl
MGI
PMID:12930780 GO_REF:0000107 NCBI chr13:46,640,172...46,642,405
Ensembl chr13:46,640,172...46,641,546
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388
JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11291863) Ensembl
MGI
PMID:11291863 GO_REF:0000107 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601
JBrowse link
G HMX2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chr28:32,679,585...32,687,972
Ensembl chr28:32,679,579...32,687,982
JBrowse link
G HMX3 H6 family homeobox 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15363417) Ensembl
MGI
PMID:15363417 GO_REF:0000107 NCBI chr28:32,673,652...32,676,700
Ensembl chr28:32,674,213...32,675,232
JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chr38:19,975,935...19,999,077
Ensembl chr38:19,977,086...19,999,010
JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr 2:77,263,534...77,366,558
Ensembl chr 2:77,301,858...77,367,724
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290
JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26234751) Ensembl
MGI
PMID:26234751 GO_REF:0000107 MGI:71926 NCBI chr 5:76,743,872...77,104,888
Ensembl chr 5:76,743,972...77,045,455
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011
JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) UniProt PMID:33122427 NCBI chr 7:44,309,459...44,326,253 JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18930042) Ensembl
MGI
PMID:18930042 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983)
(PMID:22228099)
MGI PMID:19036983 PMID:22228099 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
JBrowse link
G IGF1R insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387
JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chr14:50,487,679...51,336,906 JBrowse link
G IRS2 insulin receptor substrate 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12904469) Ensembl
MGI
PMID:12904469 GO_REF:0000107 NCBI chr22:58,197,016...58,229,026
Ensembl chr22:58,223,387...58,227,535
JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23906841) Ensembl
MGI
PMID:23906841 GO_REF:0000107 NCBI chr 5:11,382,105...11,443,219
Ensembl chr 5:11,384,434...11,443,185
JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:39,928,347...39,936,753
Ensembl chr27:39,933,825...39,935,312
JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chr24:47,060,527...47,089,077
Ensembl chr24:47,060,245...47,089,711
JBrowse link
G KDM4B lysine demethylase 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,713,900...54,843,991
Ensembl chr20:54,634,121...54,820,816
JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr 7:2,185,040...2,231,046
Ensembl chr 7:2,184,733...2,231,058
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:26306834), (PMID:29360985)
(PMID:29360985)
MGI PMID:26306834 PMID:29360985 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787
JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14566948), (PMID:15295034) Ensembl
MGI
PMID:14566948 PMID:15295034 GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883
JBrowse link
G LOC100855552 creatine kinase B-type involved_in ISS AgBase GO_REF:0000024 NCBI chr 8:71,284,104...71,287,379 JBrowse link
G LOC119877704 gamma-tubulin complex component 2 involved_in IEA Ensembl GO_REF:0000107
G MACO1 macoilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,397,715...74,458,126
Ensembl chr 2:74,397,715...74,458,126
JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:6,740,943...8,673,524
Ensembl chr24:6,744,744...8,673,275
JBrowse link
G MACROH2A2 macroH2A.2 histone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,057,935...21,087,097
Ensembl chr 4:21,057,947...21,086,730
JBrowse link
G MAP1S microtubule associated protein 1S involved_in ISO (MGI:3529608|PMID:15528209) HGNC-UCL PMID:15528209 MGI:3529608 NCBI chr20:45,147,720...45,162,431
Ensembl chr20:45,147,751...45,162,408
JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,302,037...49,329,247
Ensembl chr20:49,302,162...49,329,837
JBrowse link
G MATCAP1 microtubule associated tyrosine carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:82,182,737...82,190,590 JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr12:6,655,586...6,716,619
Ensembl chr12:6,659,910...6,686,760
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18571096) Ensembl
MGI
PMID:18571096 GO_REF:0000107 NCBI chr  X:121,866,721...121,876,088
Ensembl chr  X:121,873,218...121,932,994
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl GO_REF:0000107
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10882104) Ensembl
MGI
PMID:10882104 GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G MEIS1 Meis homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:65,765,498...65,898,714
Ensembl chr10:65,683,560...65,897,573
JBrowse link
G MEIS2 Meis homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:4,422,451...4,627,277
Ensembl chr30:4,422,440...4,741,335
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027
JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:6196220|PMID:30074985)
(PMID:26005865), (PMID:26005868)
Ensembl
ARUK-UCL
PMID:26005865 PMID:26005868 PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968
JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chr 5:31,707,975...31,718,013
Ensembl chr 5:31,708,553...31,749,842
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G NAPA NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11706940) Ensembl
MGI
PMID:11706940 GO_REF:0000107 NCBI chr 1:108,510,920...108,533,317
Ensembl chr 1:108,510,931...108,532,881
JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chr24:23,802,360...23,877,986
Ensembl chr24:23,802,351...23,866,792
JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
ISO (PMID:14765537)
(PMID:28916769)
UniProt
MGI
PMID:14765537 PMID:28916769 NCBI chr 4:61,613,580...61,727,219
Ensembl chr 4:61,613,589...61,727,205
JBrowse link
G NEGR1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chr 6:73,823,686...74,637,906
Ensembl chr 6:73,823,826...74,634,764
JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382
JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23863479) Ensembl
MGI
PMID:23863479 GO_REF:0000107 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196
JBrowse link
G NFASC neurofascin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr38:1,367,128...1,546,909
Ensembl chr38:1,366,251...1,543,630
JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322
JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8557195)
(PMID:12930780)
Ensembl
MGI
PMID:8557195 PMID:12930780 GO_REF:0000107
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467
JBrowse link
G NNAT neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chr24:26,119,153...26,121,573
Ensembl chr24:26,118,991...26,120,906
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12397106) Ensembl
MGI
PMID:12397106 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14994267) Ensembl
MGI
PMID:14994267 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998
JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:12,264,063...12,477,247
Ensembl chr18:12,264,063...12,475,230
JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chr27:39,383,017...39,454,613
Ensembl chr27:39,383,152...39,454,601
JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31383820) Ensembl
MGI
PMID:31383820 GO_REF:0000107 NCBI chr20:49,917,183...49,926,417
Ensembl chr20:49,917,350...49,926,424
JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27486780) Ensembl
MGI
PMID:27486780 GO_REF:0000107 NCBI chr 9:20,897,814...20,921,182
Ensembl chr 9:20,897,976...20,921,441
JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10409504), (PMID:12196586) Ensembl
MGI
PMID:10409504 PMID:12196586 GO_REF:0000107
G PBX1 PBX homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PBX2 PBX homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:1,577,639...1,582,609
Ensembl chr12:1,578,707...1,584,688
JBrowse link
G PBX3 PBX homeobox 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:57,198,531...57,429,820
Ensembl chr 9:57,199,812...57,429,811
JBrowse link
G PBX4 PBX homeobox 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:43,653,532...43,687,874
Ensembl chr20:43,653,447...43,687,843
JBrowse link
G PCDH18 protocadherin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,967,926...4,982,470
Ensembl chr19:4,967,925...4,982,468
JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,949,230...16,975,109
Ensembl chr10:16,963,396...16,974,705
JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26306834) Ensembl
MGI
PMID:26306834 GO_REF:0000107 NCBI chr15:14,176,932...14,187,181
Ensembl chr15:14,178,357...14,187,161
JBrowse link
G POMK protein O-mannose kinase acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr16:22,699,552...22,722,773
Ensembl chr16:22,701,736...22,719,229
JBrowse link
G POU3F1 POU class 3 homeobox 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:4,547,868...4,549,469
Ensembl chr15:4,547,920...4,549,469
JBrowse link
G POU3F2 POU class 3 homeobox 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:57,103,712...57,108,522 JBrowse link
G POU3F3 POU class 3 homeobox 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:38,513,872...38,517,692
Ensembl chr10:38,513,013...38,514,684
JBrowse link
G POU3F4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:64,427,161...64,428,825
Ensembl chr  X:64,427,325...64,428,410
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:2,815,428...2,886,474
Ensembl chr15:2,859,979...2,894,425
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9153393) Ensembl
MGI
PMID:9153393 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481
JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17425782) Ensembl
MGI
PMID:17425782 GO_REF:0000107 NCBI chr 7:42,509,760...42,513,744
Ensembl chr 7:42,509,968...42,512,091
JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,077,856...40,085,100
Ensembl chr20:40,078,163...40,085,099
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501
JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15789424) Ensembl
MGI
PMID:15789424 GO_REF:0000107 NCBI chr 1:16,940,671...16,945,127
Ensembl chr 1:16,940,658...16,943,633
JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12223565) Ensembl
MGI
PMID:12223565 GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875
JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392
JBrowse link
G ROGDI rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:38172607) Ensembl
MGI
PMID:38172607 GO_REF:0000107 NCBI chr 6:36,618,670...36,624,533
Ensembl chr 6:36,491,561...36,624,532
JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17553904), (PMID:17558409) Ensembl
MGI
PMID:17553904 PMID:17558409 GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284
JBrowse link
G RTN1 reticulon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:34,810,127...35,029,201
Ensembl chr 8:34,810,342...35,033,330
JBrowse link
G RTN4 reticulon 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574
JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chr 6:48,897,320...48,902,206
Ensembl chr 6:48,897,449...48,900,037
JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in IEA Ensembl GO_REF:0000107
G SCYL2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,365,702...39,429,979
Ensembl chr15:39,365,157...39,428,085
JBrowse link
G SELENOP selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chr 4:66,953,060...66,964,162
Ensembl chr 4:66,956,405...66,959,043
JBrowse link
G SEPTIN4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chr 9:33,138,167...33,162,212
Ensembl chr 9:33,138,165...33,157,996
JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,224,107...17,246,527
Ensembl chr 6:17,224,694...17,245,870
JBrowse link
G SHROOM4 shroom family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:43,366,921...43,639,525
Ensembl chr  X:43,369,472...43,639,302
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12569128) MGI
TreeGrafter
PMID:12569128 GO_REF:0000118 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635
JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260
JBrowse link
G SLC23A1 solute carrier family 23 member 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:34,694,064...34,708,498
Ensembl chr 2:34,698,838...34,708,412
JBrowse link
G SLC6A17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,773,367...41,822,831
Ensembl chr 6:41,773,369...41,822,962
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17035536) Ensembl
MGI
PMID:17035536 GO_REF:0000107 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048
JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
(PMID:22516202)
HGNC-UCL
MGI
PMID:14609955 PMID:22516202 NCBI chr  X:100,678,457...100,749,216
Ensembl chr  X:100,679,942...100,749,651
JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,416,396...111,438,069
Ensembl chr 1:111,416,624...111,435,575
JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:38,737,072...39,320,257
Ensembl chr21:38,737,247...39,216,549
JBrowse link
G SPHK1 sphingosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr 9:4,311,698...4,314,773
Ensembl chr 9:4,311,683...4,314,483
JBrowse link
G SPHK2 sphingosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16314531) Ensembl
MGI
PMID:16314531 GO_REF:0000107 NCBI chr 1:107,681,425...107,689,790
Ensembl chr 1:107,680,599...107,689,707
JBrowse link
G SRY sex determining region Y involved_in IBA GO_Central GO_REF:0000033
G STK36 serine/threonine kinase 36 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 NCBI chr37:25,273,237...25,297,794
Ensembl chr37:25,273,110...25,340,512
JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15690082) Ensembl
MGI
PMID:15690082 GO_REF:0000107 NCBI chr 6:42,947,639...42,998,297
Ensembl chr 6:42,948,236...43,053,027
JBrowse link
G SVBP small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr15:551,514...558,528
Ensembl chr15:551,873...558,475
JBrowse link
G TBC1D23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:6,883,199...6,939,788
Ensembl chr33:6,883,336...6,938,318
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
G TMX2 thioredoxin related transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,480,976...38,490,424
Ensembl chr18:38,481,264...38,490,326
JBrowse link
G TUBGCP2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) UniProt PMID:31630790 NCBI chr28:40,865,742...40,881,105
Ensembl chr28:40,865,748...40,881,119
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097
JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639
JBrowse link
G UFC1 ubiquitin-fold modifier conjugating enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:21,319,039...21,339,524
Ensembl chr38:21,319,054...21,340,211
JBrowse link
G UFM1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chr25:2,427,521...2,547,449
Ensembl chr25:2,386,609...2,547,311
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,532,366...63,598,362
Ensembl chr10:63,533,171...63,597,452
JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545
JBrowse link
G UNC5C unc-5 netrin receptor C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9126743)
(PMID:10818148)
(PMID:1401878), (PMID:9550145)
Ensembl
MGI
PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 GO_REF:0000107 NCBI chr32:17,981,286...18,333,111
Ensembl chr32:17,987,464...18,333,602
JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chr  X:91,835,845...91,851,755
Ensembl chr  X:91,836,727...91,851,640
JBrowse link
G UTP3 UTP3 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:59,994,445...59,996,221
Ensembl chr13:59,994,716...59,996,146
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10601035)
(PMID:10601036)
Ensembl
TreeGrafter
MGI
PMID:10601035 PMID:10601036 GO_REF:0000107 GO_REF:0000118 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717
JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chr13:1,101,226...1,834,933
Ensembl chr13:1,101,610...1,871,225
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr 6:42,733,834...42,800,419
Ensembl chr 6:42,715,951...42,799,271
JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107
G ZNF335 zinc finger protein 335 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:33,226,636...33,246,496
Ensembl chr24:33,226,688...33,245,901
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 1:55,435,451...55,535,534
Ensembl chr 1:55,435,472...55,535,543
JBrowse link
G AKT3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15713641) Ensembl
MGI
PMID:15713641 GO_REF:0000107 NCBI chr 7:34,633,064...34,931,112
Ensembl chr 7:34,636,124...34,931,112
JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381
JBrowse link
G BBS1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730
JBrowse link
G CDH2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583) Ensembl
MGI
PMID:25100583 GO_REF:0000107 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034
JBrowse link
G CTNNA2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr17:43,472,346...44,504,881
Ensembl chr17:43,472,923...44,557,766
JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484
JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25100583)
(PMID:23178126)
Ensembl
MGI
PMID:23178126 PMID:25100583 GO_REF:0000107
G FANCC FA complementation group C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr 1:71,388,931...71,678,019
Ensembl chr 1:71,487,601...71,678,506
JBrowse link
G FANCD2 FA complementation group D2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr20:8,240,270...8,297,269
Ensembl chr20:8,240,311...8,297,568
JBrowse link
G FOXO3 forkhead box O3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24483844) Ensembl
MGI
PMID:24483844 GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17954912) Ensembl
MGI
PMID:17954912 GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864
JBrowse link
G MIR124-1 microRNA mir-124-1 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr25:28,188,264...28,188,322
Ensembl chr25:28,188,250...28,188,334
JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18032602) Ensembl
MGI
PMID:18032602 GO_REF:0000107 NCBI chr24:11,887,504...11,914,055
Ensembl chr24:11,898,236...11,913,740
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17614943) Ensembl
MGI
PMID:17614943 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G SLC4A10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18165320) Ensembl
MGI
PMID:18165320 GO_REF:0000107 NCBI chr36:7,106,897...7,392,275
Ensembl chr36:7,106,994...7,390,398
JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736
JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chr 4:72,699,672...72,864,260
Ensembl chr 4:72,699,938...72,864,266
JBrowse link
G VPS51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,083,896...52,106,129
Ensembl chr18:52,083,884...52,106,046
JBrowse link
G ZNF335 zinc finger protein 335 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23178126) Ensembl
MGI
PMID:23178126 GO_REF:0000107 NCBI chr24:33,226,636...33,246,496
Ensembl chr24:33,226,688...33,245,901
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7903221) Ensembl
MGI
PMID:7903221 GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497
JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9367425) Ensembl
MGI
PMID:9367425 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239
JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7925021) Ensembl
MGI
PMID:7925021 GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948
JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:18579678) Ensembl
MGI
PMID:18579678 GO_REF:0000107
G NEUROG2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15548218) Ensembl
MGI
PMID:15548218 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17922007) Ensembl
MGI
PMID:17922007 GO_REF:0000107 NCBI chr13:38,865,963...38,869,912
Ensembl chr13:38,865,995...38,869,854
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOTCH1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792
JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795
JBrowse link
G POU4F1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8955272) Ensembl
MGI
PMID:8955272 GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:25099998) Ensembl
MGI
PMID:25099998 GO_REF:0000107 NCBI chr 6:28,242,190...28,356,218
Ensembl chr 6:28,225,677...28,357,180
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10970885) Ensembl
MGI
PMID:10970885 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15677725) Ensembl
MGI
PMID:15677725 GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206
JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,524,336...7,825,143
Ensembl chr 4:7,524,397...7,822,558
JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166
JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10729342) Ensembl
MGI
PMID:10729342 GO_REF:0000107 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035
JBrowse link
G FABP7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chr 1:62,084,372...62,088,547
Ensembl chr 1:61,967,129...62,088,547
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16613831) Ensembl
MGI
PMID:16613831 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chr10:8,348,101...8,491,435 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581
JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10325223) Ensembl
MGI
PMID:10325223 GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815
JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830
JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322
JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788
JBrowse link
G NGF nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr17:52,900,647...52,901,607
Ensembl chr17:52,900,647...52,901,607
JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr 1:108,659,637...108,704,217
Ensembl chr 1:108,659,637...108,675,401
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19842188) Ensembl
MGI
PMID:19842188 GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chr 5:51,397,837...52,505,513
Ensembl chr 5:52,231,141...52,502,336
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:55,429,989...55,571,917
Ensembl chr10:55,429,940...55,571,916
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCTN1 tectonic family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16357211) Ensembl
MGI
PMID:16357211 GO_REF:0000107 NCBI chr26:8,411,429...8,444,640
Ensembl chr26:8,407,105...8,437,027
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,050,588...35,073,633
Ensembl chr  X:35,050,606...35,073,067
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426
JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995 NCBI chr 9:48,610,906...48,630,932
Ensembl chr 9:48,613,996...48,629,857
JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr18:42,673,432...42,780,320
Ensembl chr18:42,711,471...42,780,090
JBrowse link
G CNTN1 contactin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:12,655,021...13,005,536
Ensembl chr27:12,657,287...12,920,315
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17952069) Ensembl
MGI
PMID:17952069 GO_REF:0000107 NCBI chr 1:110,173,781...110,191,612
Ensembl chr 1:110,173,715...110,190,125
JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386
JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:23,171,028...23,208,055
Ensembl chr14:23,171,050...23,555,257
JBrowse link
G MOBP myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr23:9,121,277...9,176,128
Ensembl chr23:9,121,319...9,161,972
JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305
JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,982,811...29,999,565
Ensembl chr25:29,982,811...29,999,563
JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18815260)
(PMID:21491498)
Ensembl
MGI
PMID:18815260 PMID:21491498 GO_REF:0000107 NCBI chr 5:75,878,539...75,923,886
Ensembl chr 5:75,878,243...75,948,094
JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr 9:47,338,435...47,361,974
Ensembl chr 9:47,343,120...47,360,914
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360
JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621
JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,293,184...20,307,708
Ensembl chr 9:20,293,170...20,307,662
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17006542) Ensembl
MGI
PMID:17006542 GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chr35:18,358,518...18,360,767
Ensembl chr35:18,357,826...18,359,011
Ensembl chr35:18,357,826...18,359,011
JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chr38:22,114,718...22,143,625
Ensembl chr38:22,130,508...22,140,813
JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (MGI:1202048|PMID:9482783) UniProt PMID:9482783 MGI:1202048 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386
JBrowse link
G MAL mal, T cell differentiation protein acts_upstream_of ISO (PMID:15337780) MGI PMID:15337780 NCBI chr17:34,977,298...35,000,690
Ensembl chr17:34,977,298...35,001,349
JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:54,690,073...54,723,046
Ensembl chr18:54,692,453...54,723,085
JBrowse link
G NCSTN nicastrin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27008863) Ensembl
MGI
PMID:27008863 GO_REF:0000107 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097
JBrowse link
G NKX6-2 NK6 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15601927) Ensembl
MGI
PMID:15601927 GO_REF:0000107 NCBI chr28:40,568,948...40,570,240
Ensembl chr28:40,569,093...40,570,793
JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:1694232) Ensembl
MGI
GO_Central
PMID:1694232 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:77,191,112...77,207,772
Ensembl chr  X:77,191,150...77,205,964
JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,680,441...26,690,530
Ensembl chr10:26,681,122...26,689,882
JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP35 Rho GTPase activating protein 35 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337
JBrowse link
G ARHGEF28 Rho guanine nucleotide exchange factor 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15378065) Ensembl
MGI
PMID:15378065 GO_REF:0000107 NCBI chr 2:56,427,601...56,700,880
Ensembl chr 2:56,464,994...56,700,864
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15208636) Ensembl
MGI
PMID:15208636 GO_REF:0000107 NCBI chr 5:33,187,614...33,244,483
Ensembl chr 5:33,204,452...33,266,052
JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr13:35,302,439...35,541,336
Ensembl chr13:35,303,380...35,541,294
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGBL4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chr15:11,056,440...12,435,428
Ensembl chr15:11,056,447...12,435,448
JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312
JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16469766)
(PMID:15169849)
Ensembl
MGI
PMID:15169849 PMID:16469766 GO_REF:0000107 NCBI chr15:41,694,021...41,696,933
Ensembl chr15:41,694,269...41,695,391
JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869
JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,625,011...72,794,641
Ensembl chr11:72,628,582...72,764,077
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:20020054) MGI PMID:20020054 NCBI chr38:70,921...75,149
Ensembl chr38:70,452...72,976
JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G FGF8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G FOXG1 forkhead box G1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16680166) Ensembl
MGI
PMID:16680166 GO_REF:0000107 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr13:43,011,491...43,349,876
Ensembl chr13:42,992,569...43,349,923
JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10357893) Ensembl
MGI
PMID:10357893 GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991
JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,264,959...52,277,298
Ensembl chr11:52,265,070...52,277,213
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:9886073) MGI PMID:9886073 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10592285) Ensembl
MGI
PMID:10592285 GO_REF:0000107 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chr30:38,668,199...38,738,178
Ensembl chr30:38,721,394...38,737,464
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530
JBrowse link
G MAP2 microtubule associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:17,316,899...17,611,360
Ensembl chr37:17,466,678...17,607,803
JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915
JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,657,693...109,683,277
Ensembl chr 1:109,659,184...109,682,902
JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,824,579...37,831,289
Ensembl chr14:37,823,861...37,831,443
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032
JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:41,230,230...41,330,017
Ensembl chr 8:41,275,947...41,327,348
JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:43,501,752...43,660,077
Ensembl chr 9:43,559,708...43,651,377
JBrowse link
G TTC36 tetratricopeptide repeat domain 36 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31537781) Ensembl
MGI
PMID:31537781 GO_REF:0000107 NCBI chr 5:15,207,400...15,211,905
Ensembl chr 5:15,207,403...15,211,853
JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18215621) Ensembl
MGI
PMID:18215621 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15469980) Ensembl
MGI
PMID:15469980 GO_REF:0000107 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444
JBrowse link
G BRINP2 BMP/retinoic acid inducible neural specific 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,332,465...22,449,295
Ensembl chr 7:22,339,056...22,448,854
JBrowse link
G BRINP3 BMP/retinoic acid inducible neural specific 3 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chr38:8,181,227...8,558,518
Ensembl chr38:8,205,916...8,558,482
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032
JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681
JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(PMID:15148302)
(PMID:17670789)
Ensembl
MGI
PMID:15148302 PMID:17670789 GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chr16:19,509,038...19,514,378
Ensembl chr16:19,499,582...19,512,836
JBrowse link
G NKX6-1 NK6 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19592574) Ensembl
MGI
PMID:19592574 GO_REF:0000107 NCBI chr32:8,256,513...8,263,238
Ensembl chr32:8,256,254...8,262,004
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11113533) Ensembl
TreeGrafter
MGI
PMID:11113533 GO_REF:0000107 GO_REF:0000118 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780
JBrowse link
G POU4F1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8876243)
(PMID:8955272)
Ensembl
MGI
PMID:8876243 PMID:8955272 GO_REF:0000107 NCBI chr22:31,992,657...31,997,066 JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571630) Ensembl
MGI
PMID:16571630 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr27:22,857,661...23,855,709
Ensembl chr27:23,452,985...23,851,380
JBrowse link
G SPOCK1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chr11:24,733,290...25,013,400
Ensembl chr11:24,733,603...25,007,376
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16292311) Ensembl
MGI
PMID:16292311 GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047
JBrowse link
G DCX doublecortin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16387638) Ensembl
MGI
PMID:16387638 GO_REF:0000107 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827
JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393
JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
JBrowse link
G EPHB3 EPH receptor B3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12971893) Ensembl
MGI
PMID:12971893 GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954
JBrowse link
G MYCBP2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18031680) Ensembl
MGI
PMID:18031680 GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10585298) Ensembl
MGI
PMID:10585298 GO_REF:0000107 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780
JBrowse link
G PRDM8 PR/SET domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22284184) Ensembl
MGI
PMID:22284184 GO_REF:0000107 NCBI chr32:4,435,693...4,451,500
Ensembl chr32:4,443,289...4,451,036
JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17197442) MGI
TreeGrafter
PMID:17197442 GO_REF:0000118 NCBI chr 1:113,167,251...113,243,071
Ensembl chr 1:113,168,484...113,240,934
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZIC2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055
JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853
JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8855328) Ensembl
MGI
PMID:8855328 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,528,700...38,531,899
Ensembl chr18:38,528,621...38,530,846
JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr 5:21,097,000...21,168,470
Ensembl chr 5:21,100,045...21,167,166
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20798045) Ensembl
MGI
PMID:20798045 GO_REF:0000107 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838
JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr11:61,394,002...61,462,056
Ensembl chr11:61,405,034...61,461,396
JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581
JBrowse link
G NAV2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chr21:41,458,280...42,181,227
Ensembl chr21:41,458,984...42,177,813
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,864,708...22,869,044
Ensembl chr 9:22,866,212...22,867,360
JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10407039) Ensembl
MGI
PMID:10407039 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24431450) Ensembl
MGI
PMID:24431450 GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008
JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484
JBrowse link
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G LOC106559920 TMF1 regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chr17:62,290,748...62,309,870 JBrowse link
G LOC610636 tubulin alpha-1B chain involved_in ISO (PMID:17218254) MGI PMID:17218254 NCBI chr37:25,811,491...25,818,838 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571625) Ensembl
MGI
PMID:16571625 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,168,298...73,172,692 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:35,522,873...35,676,086 JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917
JBrowse link
G LOC491316 midkine involved_in ISO (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) Ensembl
MGI
PMID:20153830 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:17409116) MGI PMID:17409116 NCBI chr37:29,699,551...29,750,151
Ensembl chr37:29,700,024...29,724,228
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,548,407...2,602,371
Ensembl chr 7:2,548,258...2,601,581
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,974,989...65,978,464
Ensembl chr 2:65,974,981...65,977,179
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:15,322,256...16,787,966
Ensembl chr32:15,322,738...16,753,656
JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) MGI PMID:17984326 NCBI chr28:40,757,950...40,790,603 JBrowse link
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr16:12,316,487...12,369,148
Ensembl chr16:12,316,336...12,369,387
JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:23042739)
MGI PMID:21800304 PMID:23042739 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:52,418,390...52,983,155
Ensembl chr  X:52,455,373...52,982,244
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229
JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) MGI PMID:9405095 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502
JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of
IEA
ISO
(PMID:10027293) Ensembl
MGI
PMID:10027293 GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295
JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16651541) Ensembl
MGI
PMID:16651541 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G PSMG1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO (PMID:20498273) MGI PMID:20498273 NCBI chr31:33,914,640...33,925,925
Ensembl chr31:33,914,668...33,925,883
JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24466353) Ensembl
MGI
PMID:24466353 GO_REF:0000107 NCBI chr 5:61,868,288...62,249,009
Ensembl chr 5:61,868,685...62,215,973
JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of
IEA
ISO
(PMID:10027293) Ensembl
MGI
PMID:10027293 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G ZNF423 zinc finger protein 423 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27727273) Ensembl
MGI
PMID:27727273 GO_REF:0000107 NCBI chr 2:65,512,342...65,778,410
Ensembl chr 2:65,438,842...65,778,407
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA2 plexin A2 acts_upstream_of_or_within ISO (PMID:18327254) MGI PMID:18327254 NCBI chr 7:6,863,518...7,049,301
Ensembl chr 7:6,863,663...7,049,250
JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,297,652...14,429,634
Ensembl chr 4:14,311,302...14,331,568
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chr 9:45,594,657...45,627,499
Ensembl chr 9:45,598,899...45,627,589
JBrowse link
G CRK CRK proto-oncogene, adaptor protein involved_in IEA Ensembl GO_REF:0000107
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19074029) Ensembl
MGI
PMID:19074029 GO_REF:0000107 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964
JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:121,708,695...121,722,819
Ensembl chr  X:121,708,894...121,733,365
JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26609159) Ensembl
MGI
PMID:26609159 GO_REF:0000107 NCBI chr28:29,285,422...29,287,236 JBrowse link
G SAMD4B sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr 1:113,828,432...113,857,336
Ensembl chr 1:113,828,447...113,857,314
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474
JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869
JBrowse link
G ATXN2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chr26:9,073,667...9,188,429
Ensembl chr26:9,073,809...9,188,414
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163)
(PMID:10630211)
(PMID:7834360)
MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032
JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20153830) Ensembl
MGI
PMID:20153830 GO_REF:0000107 NCBI chr18:25,782,012...25,783,897 JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,802,711...4,831,230
Ensembl chr27:4,798,235...4,827,917
JBrowse link
G FOXP2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20041218) Ensembl
MGI
PMID:20041218 GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444
JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17664423) Ensembl
MGI
PMID:17664423 GO_REF:0000107 NCBI chr26:10,776,991...10,785,820
Ensembl chr26:10,777,242...10,785,815
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chr 4:22,571,095...22,603,880
Ensembl chr 4:22,572,153...22,603,848
JBrowse link
G RORA RAR related orphan receptor A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8996814) Ensembl
MGI
PMID:8996814 GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600)
(PMID:24491816)
MGI PMID:21937600 PMID:24491816 NCBI chr 7:44,250,822...44,289,737 JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr 3:1,700,310...1,715,841
Ensembl chr 3:1,702,905...1,756,025