Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:central nervous system development
go back to main search page
Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgra2 adhesion G protein-coupled receptor A2 involved_in ISO (MGI:4839817|PMID:21071672) UniProt PMID:21071672 MGI:4839817 NCBI chrNW_004955463:13,514,065...13,549,806
Ensembl chrNW_004955463:13,514,082...13,548,339
JBrowse link
G Aldh3a2 aldehyde dehydrogenase 3 family member A2 involved_in ISO (PMID:8528251) UniProt PMID:8528251 NCBI chrNW_004955467:141,592...162,376
Ensembl chrNW_004955467:140,760...162,742
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 involved_in ISO (PMID:9683595) UniProt PMID:9683595 NCBI chrNW_004955483:2,467,425...2,494,416
Ensembl chrNW_004955483:2,467,425...2,494,416
JBrowse link
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO (PMID:25259927) UniProt PMID:25259927 NCBI chrNW_004955482:322,251...353,918
Ensembl chrNW_004955482:333,966...359,302
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (MGI:2157648|PMID:11318878) UniProt PMID:11318878 MGI:2157648 NCBI chrNW_004955416:11,279,866...11,429,365
Ensembl chrNW_004955416:11,308,846...11,429,365
JBrowse link
G B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in ISO (PMID:11384981) UniProt PMID:11384981 NCBI chrNW_004955420:24,029,867...24,061,801
Ensembl chrNW_004955420:24,046,485...24,047,624
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:9556299) BHF-UCL PMID:9556299 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248
JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chrNW_004955420:23,111,690...23,120,038
Ensembl chrNW_004955420:23,112,093...23,120,036
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:11823447) MGI PMID:11823447 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chrNW_004955500:6,860,771...6,885,466
Ensembl chrNW_004955500:6,860,771...6,885,473
JBrowse link
G Dhx30 DExH-box helicase 30 involved_in ISO (MGI:5616495|PMID:25219788) UniProt PMID:25219788 MGI:5616495 NCBI chrNW_004955420:24,537,608...24,549,771
Ensembl chrNW_004955420:24,537,608...24,561,293
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:2183620|PMID:12055180) UniProt PMID:12055180 MGI:2183620 NCBI chrNW_004955464:11,788,526...11,811,885
Ensembl chrNW_004955464:11,788,494...11,811,890
JBrowse link
G Dner delta/notch like EGF repeat containing involved_in ISO (PMID:11950833) UniProt PMID:11950833 NCBI chrNW_004955453:5,307,256...5,615,550
Ensembl chrNW_004955453:5,307,256...5,615,609
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta involved_in ISO (PMID:15776425) UniProt PMID:15776425 NCBI chrNW_004955523:553,356...559,376
Ensembl chrNW_004955523:553,356...559,376
JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 involved_in ISO (MGI:3850815|PMID:19185337) UniProt PMID:19185337 MGI:3850815 NCBI chrNW_004955403:50,565,496...50,635,226
Ensembl chrNW_004955403:50,565,583...50,637,294
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:20675713) MGI PMID:20675713 NCBI chrNW_004955574:779,672...789,621
Ensembl chrNW_004955574:786,758...788,348
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within ISO (PMID:17005728) MGI PMID:17005728 NCBI chrNW_004955443:1,564,794...1,631,975
Ensembl chrNW_004955443:1,564,202...1,632,580
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:18346921) MGI PMID:18346921 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:12435628)
(PMID:12435629)
MGI PMID:12435628 PMID:12435629 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within ISO (PMID:11787818) MGI PMID:11787818 NCBI chrNW_004955452:4,125,792...4,159,699
Ensembl chrNW_004955452:4,128,269...4,160,683
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO (PMID:11731457), (PMID:12724834) MGI PMID:11731457 PMID:12724834 NCBI chrNW_004955447:16,714,870...16,715,757 JBrowse link
G Helt helt bHLH transcription factor acts_upstream_of_or_within ISO (PMID:16968817) MGI PMID:16968817 NCBI chrNW_004955403:23,996,488...23,998,290
Ensembl chrNW_004955403:23,996,488...23,998,290
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein involved_in ISO (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chrNW_004955452:3,537,352...3,538,921
Ensembl chrNW_004955452:3,537,021...3,560,954
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (PMID:9875844)
(PMID:9889105)
(PMID:10911993)
MGI PMID:9875844 PMID:9889105 PMID:10911993 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO (PMID:15148302) MGI PMID:15148302 NCBI chrNW_004955462:11,328,583...11,484,438
Ensembl chrNW_004955462:11,329,676...11,477,770
JBrowse link
G LOC102020494 cytochrome c oxidase subunit 7B, mitochondrial involved_in ISO (PMID:23122588) UniProt PMID:23122588 NCBI chrNW_004955557:1,341,934...1,348,610
Ensembl chrNW_004955557:1,341,934...1,348,610
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO (PMID:15649943) MGI PMID:15649943 NCBI chrNW_004955416:31,125,354...31,127,010
Ensembl chrNW_004955416:31,125,924...31,126,889
JBrowse link
G Ngfr nerve growth factor receptor acts_upstream_of_or_within ISO (PMID:11978834) MGI PMID:11978834 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISO (MGI:2447374|PMID:12182881)
(PMID:35108495)
UniProt PMID:12182881 PMID:35108495 MGI:2447374 NCBI chrNW_004955410:12,437,248...12,518,083
Ensembl chrNW_004955410:12,437,248...12,518,075
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11731459)
(PMID:12652306)
MGI PMID:11731459 PMID:12652306 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax8 paired box 8 involved_in ISO (MGI:48612|PMID:1723950)
(PMID:15494458)
UniProt PMID:1723950 PMID:15494458 MGI:48612 NCBI chrNW_004955470:1,016,226...1,072,643
Ensembl chrNW_004955470:1,016,289...1,073,796
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within ISO (MGI:1861161|PMID:10854042) UniProt PMID:10854042 MGI:1861161 NCBI chrNW_004955495:4,760,576...4,791,422
Ensembl chrNW_004955495:4,761,862...4,791,490
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:12091320) MGI PMID:12091320 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (PMID:11900467) MGI PMID:11900467 NCBI chrNW_004955410:8,424,439...8,863,966
Ensembl chrNW_004955410:8,424,394...8,863,969
JBrowse link
G Sema6b semaphorin 6B involved_in ISO (PMID:32169168) UniProt PMID:32169168 NCBI chrNW_004955495:4,387,147...4,399,430
Ensembl chrNW_004955495:4,388,516...4,399,313
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:12435628) MGI PMID:12435628 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Slc2a1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (PMID:10227690), (PMID:1714544) ARUK-UCL PMID:1714544 PMID:10227690 NCBI chrNW_004955537:2,408,042...2,438,788
Ensembl chrNW_004955537:2,408,042...2,439,511
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:12435628) MGI PMID:12435628 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:86312|PMID:9119111) UniProt PMID:9119111 MGI:86312 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:34211179)
(MGI:6742151|PMID:34211179)
UniProt PMID:34211179 MGI:6742151 NCBI chrNW_004955441:20,248,578...20,378,038
Ensembl chrNW_004955441:20,248,578...20,378,038
JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within ISO (PMID:19786569) MGI PMID:19786569 NCBI chrNW_004955417:14,098,851...14,381,553
Ensembl chrNW_004955417:14,095,694...14,381,607
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO (PMID:19786569) MGI PMID:19786569 NCBI chrNW_004955445:12,308,285...12,399,012
Ensembl chrNW_004955445:12,308,285...12,399,012
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within ISO (PMID:19624305) MGI PMID:19624305 NCBI chrNW_004955537:2,968,839...3,017,863
Ensembl chrNW_004955537:2,968,839...3,017,863
JBrowse link
G Thoc6 THO complex subunit 6 involved_in ISO (PMID:23621916) UniProt PMID:23621916 NCBI chrNW_004955442:14,314,100...14,317,726
Ensembl chrNW_004955442:14,314,100...14,317,724
JBrowse link
G Tlx1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chrNW_004955485:9,070,601...9,076,063 JBrowse link
G Tlx3 T cell leukemia homeobox 3 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chrNW_004955408:24,103,123...24,105,292
Ensembl chrNW_004955408:24,102,996...24,105,292
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:16199867) MGI PMID:16199867 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Tp53bp2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chrNW_004955520:1,254,853...1,285,118
Ensembl chrNW_004955520:1,257,216...1,285,322
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601035)
(PMID:10601036)
MGI PMID:10601035 PMID:10601036 NCBI chrNW_004955431:21,853,636...21,857,547
Ensembl chrNW_004955431:21,853,636...21,857,547
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in ISO (MGI:6393201|PMID:31495077) UniProt PMID:31495077 MGI:6393201 NCBI chrNW_004955417:14,570,399...15,228,106
Ensembl chrNW_004955417:14,570,904...15,227,877
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (PMID:28675177) MGI PMID:28675177 NCBI chrNW_004955402:47,154,350...47,183,979
Ensembl chrNW_004955402:47,154,007...47,184,021
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO (MGI:3687421|PMID:8541544) UniProt PMID:8541544 MGI:3687421 NCBI chrNW_004955412:15,668,332...15,845,384
Ensembl chrNW_004955412:15,668,332...15,845,372
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chrNW_004955429:23,011,627...23,198,188
Ensembl chrNW_004955429:23,010,790...23,198,250
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
JBrowse link
G Zic1 Zic family member 1 acts_upstream_of_or_within ISO (PMID:11756505)
(PMID:9412507)
MGI PMID:9412507 PMID:11756505 NCBI chrNW_004955474:10,029,226...10,033,104
Ensembl chrNW_004955474:10,029,174...10,033,380
JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:11756505) MGI PMID:11756505 NCBI chrNW_004955404:10,731,987...10,735,599 JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:21533046) MGI PMID:21533046 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218
JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (PMID:9140068) MGI PMID:9140068 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within ISO (PMID:15985453) MGI PMID:15985453 NCBI chrNW_004955422:24,481,246...24,490,529 JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO (PMID:1270792), (PMID:1329576), (PMID:1504465) MGI PMID:1270792 PMID:1329576 PMID:1504465 NCBI chrNW_004955410:32,084,210...32,114,844
Ensembl chrNW_004955410:32,102,367...32,115,080
JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO (PMID:8631293) MGI PMID:8631293 NCBI chrNW_004955497:7,167,915...7,169,177
Ensembl chrNW_004955497:7,167,915...7,169,177
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO (PMID:9247269) MGI PMID:9247269 NCBI chrNW_004955504:721,470...747,553
Ensembl chrNW_004955504:721,429...747,630
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI
PMID:16932809 PMID:21815952 RGD:8661681 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934
JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chrNW_004955409:8,270,657...8,288,201
Ensembl chrNW_004955409:8,271,164...8,287,096
JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) CACAO PMID:18778775 MGI:3821675 NCBI chrNW_004955464:5,837,002...5,912,178
Ensembl chrNW_004955464:5,837,009...5,911,672
JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:2664023|PMID:12805306) ARUK-UCL PMID:12805306 MGI:2664023 NCBI chrNW_004955468:11,898,786...11,924,341
Ensembl chrNW_004955468:11,898,915...11,922,400
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:12527005) MGI PMID:12527005 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chrNW_004955414:14,365,325...14,447,470
Ensembl chrNW_004955414:14,365,157...14,450,611
JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:24441682) MGI PMID:24441682 NCBI chrNW_004955449:12,293,534...12,301,440
Ensembl chrNW_004955449:12,293,601...12,301,272
JBrowse link
G Uba6 ubiquitin like modifier activating enzyme 6 acts_upstream_of_or_within ISO (PMID:23499007) MGI PMID:23499007 NCBI chrNW_004955447:5,213,792...5,282,266
Ensembl chrNW_004955447:5,213,146...5,284,553
JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) UniProt PMID:23206892 MGI:5467661 NCBI chrNW_004955486:2,161,927...2,185,230
Ensembl chrNW_004955486:2,161,913...2,174,013
JBrowse link
G Fbxo45 F-box protein 45 acts_upstream_of_or_within ISO (PMID:19398581) MGI PMID:19398581 NCBI chrNW_004955420:12,714,749...12,727,600
Ensembl chrNW_004955420:12,714,608...12,726,113
JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:4453290|PMID:19961580) UniProt PMID:19961580 MGI:4453290 NCBI chrNW_004955434:17,192,188...17,603,503
Ensembl chrNW_004955434:17,198,571...17,415,084
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:11997145) MGI PMID:11997145 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chrNW_004955410:35,281,042...35,714,094
Ensembl chrNW_004955410:35,281,648...35,713,453
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within
ISO (MGI:5467661|PMID:23206892)
(PMID:21055390)
UniProt
MGI
PMID:21055390 PMID:23206892 MGI:5467661 NCBI chrNW_004955414:15,166,349...15,178,284
Ensembl chrNW_004955414:15,166,349...15,178,284
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004955435:12,414,964...12,479,883
Ensembl chrNW_004955435:12,414,600...12,466,040
JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chrNW_004955455:7,886,720...7,906,214
Ensembl chrNW_004955455:7,895,974...7,906,505
JBrowse link
G Ager advanced glycosylation end-product specific receptor involved_in ISO (PMID:15457210) ARUK-UCL PMID:15457210 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:20445063)
(PMID:18723082)
(PMID:15457210)
ARUK-UCL PMID:15457210 PMID:18723082 PMID:20445063 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Bace2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chrNW_004955407:40,792,089...40,879,872
Ensembl chrNW_004955407:40,792,887...40,874,760
JBrowse link
G C1qa complement C1q A chain involved_in ISO (MGI:3607035|PMID:15269255) ARUK-UCL PMID:15269255 MGI:3607035 NCBI chrNW_004955452:2,753,362...2,756,220
Ensembl chrNW_004955452:2,752,970...2,756,488
JBrowse link
G C5ar1 complement C5a receptor 1 involved_in ISO (MGI:4354701|PMID:19561098) ARUK-UCL PMID:19561098 MGI:4354701 NCBI chrNW_004955574:1,221,942...1,229,634
Ensembl chrNW_004955574:1,221,187...1,231,655
JBrowse link
G Cntf ciliary neurotrophic factor ISO spinal cord astrocytes RGD PMID:11771938 RGD:1626172 NCBI chrNW_004955511:3,527,552...3,531,275
Ensembl chrNW_004955511:3,527,552...3,534,348
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:18375019)
(MGI:4454469|PMID:20368278)
ARUK-UCL PMID:18375019 PMID:20368278 MGI:4454469 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (MGI:3697769|PMID:17255335) ARUK-UCL PMID:17255335 MGI:3697769 NCBI chrNW_004955436:22,183,318...22,199,013 JBrowse link
G Il1b interleukin 1 beta acts_upstream_of_or_within ISO (PMID:28377412) MGI PMID:28377412 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:26607664) MGI PMID:26607664 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:20445063) ARUK-UCL PMID:20445063 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6095556|PMID:29073081) ARUK-UCL PMID:29073081 MGI:6095556 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Grn granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:5465209|PMID:23152628) ARUK-UCL PMID:23152628 MGI:5465209 NCBI chrNW_004955458:4,861,431...4,941,939
Ensembl chrNW_004955458:4,861,431...4,941,146
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chrNW_004955437:645,482...648,607
Ensembl chrNW_004955437:645,897...648,479
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chrNW_004955408:28,003,229...28,006,595
Ensembl chrNW_004955408:28,003,229...28,006,595
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chrNW_004955420:23,313,405...23,322,748
Ensembl chrNW_004955420:23,309,378...23,322,698
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chrNW_004955451:17,695,835...17,703,894
Ensembl chrNW_004955451:17,695,835...17,703,268
JBrowse link
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO (PMID:19907020) MGI PMID:19907020 NCBI chrNW_004955513:872,301...934,234
Ensembl chrNW_004955513:881,092...934,458
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004955548:781,522...797,246
Ensembl chrNW_004955548:781,015...797,935
JBrowse link
G Ror1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004955423:26,029,122...26,274,668
Ensembl chrNW_004955423:26,028,250...26,170,533
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chrNW_004955515:313,612...554,751
Ensembl chrNW_004955515:313,604...553,774
JBrowse link
G S100a9 S100 calcium binding protein A9 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chrNW_004955592:90,647...93,842 JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within ISO (PMID:22577135) MGI PMID:22577135 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tspan2 tetraspanin 2 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chrNW_004955435:18,344,320...18,371,248
Ensembl chrNW_004955435:18,344,320...18,372,534
JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554
JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ISO RGD PMID:17141959 RGD:2303044 NCBI chrNW_004955442:729,322...858,826
Ensembl chrNW_004955442:729,316...860,290
JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chrNW_004955459:15,216,914...15,284,013
Ensembl chrNW_004955459:15,216,914...15,284,013
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:26025376) MGI PMID:26025376 NCBI chrNW_004955572:1,308,491...1,365,147 JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of ISO (PMID:18848628) MGI PMID:18848628 NCBI chrNW_004955464:2,325,529...2,721,497
Ensembl chrNW_004955464:2,455,346...2,724,358
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO (PMID:15723074) UniProt PMID:15723074 NCBI chrNW_004955420:23,313,405...23,322,748
Ensembl chrNW_004955420:23,309,378...23,322,698
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Gap43 growth associated protein 43 acts_upstream_of_or_within ISO (PMID:15234344) MGI PMID:15234344 NCBI chrNW_004955427:15,696,549...15,791,279
Ensembl chrNW_004955427:15,695,963...15,791,327
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chrNW_004955412:20,192,519...20,202,635
Ensembl chrNW_004955412:20,192,522...20,202,635
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chrNW_004955483:6,598,804...6,601,496
Ensembl chrNW_004955483:6,600,867...6,602,564
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chrNW_004955405:41,891,430...42,225,066
Ensembl chrNW_004955405:41,931,058...42,139,608
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chrNW_004955455:4,489,515...4,505,439
Ensembl chrNW_004955455:4,489,421...4,497,940
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO (PMID:27654426) MGI PMID:27654426 NCBI chrNW_004955428:13,519,285...13,548,007
Ensembl chrNW_004955428:13,519,277...13,544,695
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chrNW_004955487:9,219,528...9,224,818
Ensembl chrNW_004955487:9,219,528...9,224,818
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:12111813) MGI PMID:12111813 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of ISO (PMID:11297510)
(PMID:10442636), (PMID:9878702)
MGI PMID:9878702 PMID:10442636 PMID:11297510 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:29106906)
MGI PMID:21800304 PMID:29106906 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO (PMID:19258013) MGI PMID:19258013 NCBI chrNW_004955415:29,263,741...29,268,259
Ensembl chrNW_004955415:29,258,434...29,268,259
JBrowse link
G Notch1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of ISO (PMID:14702088) MGI PMID:14702088 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in ISO (PMID:29890290) MGI PMID:29890290 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
ISO (PMID:30186101)
(PMID:19258013)
RGD
MGI
PMID:19258013 PMID:22944581 PMID:30186101 RGD:8552357 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G S100b S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chrNW_004955407:42,972,584...42,980,510
Ensembl chrNW_004955407:42,972,584...42,980,510
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of ISO (PMID:10357934) MGI PMID:10357934 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Sox6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chrNW_004955414:30,965,626...31,532,473
Ensembl chrNW_004955414:30,971,920...31,335,263
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (MGI:5284803|PMID:15156153) UniProt PMID:15156153 MGI:5284803 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:15590934) MGI PMID:15590934 NCBI chrNW_004955431:21,853,636...21,857,547
Ensembl chrNW_004955431:21,853,636...21,857,547
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO (PMID:29890290) MGI PMID:29890290 NCBI chrNW_004955424:20,329,009...20,443,652
Ensembl chrNW_004955424:20,327,754...20,445,980
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO (PMID:14573516) MGI PMID:14573516 NCBI chrNW_004955411:2,872,758...2,917,154
Ensembl chrNW_004955411:2,898,693...2,917,168
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (PMID:16292311) MGI PMID:16292311 NCBI chrNW_004955464:11,304,611...11,317,420
Ensembl chrNW_004955464:11,310,628...11,315,924
JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chrNW_004955406:18,435,984...18,527,967
Ensembl chrNW_004955406:18,437,672...18,527,698
JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chrNW_004955451:17,695,835...17,703,894
Ensembl chrNW_004955451:17,695,835...17,703,268
JBrowse link
G Gpr37l1 G protein-coupled receptor 37 like 1 acts_upstream_of ISO (PMID:24062445) MGI PMID:24062445 NCBI chrNW_004955406:38,214,490...38,223,281
Ensembl chrNW_004955406:38,214,423...38,223,281
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152
JBrowse link
G Plpp3 phospholipid phosphatase 3 acts_upstream_of_or_within ISO (PMID:21319224) MGI PMID:21319224 NCBI chrNW_004955464:3,122,420...3,197,359
Ensembl chrNW_004955464:3,081,334...3,197,413
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10375501) MGI PMID:10375501 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chrNW_004955449:8,242,327...8,306,012
Ensembl chrNW_004955449:8,241,990...8,308,562
JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (PMID:10816608) MGI PMID:10816608 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554
JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatk apoptosis associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:22573681) MGI PMID:22573681 NCBI chrNW_004955506:1,828,326...1,868,302
Ensembl chrNW_004955506:1,828,326...1,866,636
JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in ISO (PMID:22100072) UniProt PMID:22100072 NCBI chrNW_004955453:14,215,104...14,222,338
Ensembl chrNW_004955453:14,215,408...14,222,172
JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004955481:2,503,309...2,710,667
Ensembl chrNW_004955481:2,503,315...2,654,244
JBrowse link
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:20147288 RGD:405855864 NCBI chrNW_004955573:79,606...85,799
Ensembl chrNW_004955573:80,298...85,799
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISO (PMID:15044805) GDB PMID:15044805 NCBI chrNW_004955433:15,253,196...15,288,982
Ensembl chrNW_004955433:15,259,720...15,289,151
JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) UniProt PMID:26299366 NCBI chrNW_004955428:17,525,388...17,823,478
Ensembl chrNW_004955428:17,524,583...17,823,108
JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131)
(PMID:21746835)
MGI PMID:18776131 PMID:21746835 NCBI chrNW_004955438:18,178,822...18,233,051
Ensembl chrNW_004955438:18,178,822...18,233,051
JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:17487225) MGI PMID:17487225 NCBI chrNW_004955469:11,049,373...11,751,235
Ensembl chrNW_004955469:11,047,048...11,548,233
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) UniProt PMID:34942119 NCBI chrNW_004955482:7,302,853...7,328,145
Ensembl chrNW_004955482:7,302,455...7,328,145
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO (PMID:9753321) MGI PMID:9753321 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677
JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371) MGI PMID:22139371 NCBI chrNW_004955407:360,898...387,563
Ensembl chrNW_004955407:360,600...380,900
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:24022475) UniProt PMID:24022475 NCBI chrNW_004955416:11,279,866...11,429,365
Ensembl chrNW_004955416:11,308,846...11,429,365
JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) MGI PMID:20823249 NCBI chrNW_004955406:33,665,675...33,720,468
Ensembl chrNW_004955406:33,661,322...33,720,259
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:12223565) MGI PMID:12223565 NCBI chrNW_004955405:4,461,704...4,462,756
Ensembl chrNW_004955405:4,461,704...4,462,756
JBrowse link
G Atxn1 ataxin 1 involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004955483:9,159,877...9,559,453
Ensembl chrNW_004955483:9,536,261...9,552,321
JBrowse link
G Atxn1l ataxin 1 like involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004955484:4,546,012...4,557,184
Ensembl chrNW_004955484:4,546,012...4,557,184
JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chrNW_004955431:14,507,184...14,621,376
Ensembl chrNW_004955431:14,507,184...14,633,351
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO (PMID:19265195) MGI PMID:19265195 NCBI chrNW_004955537:3,506,836...3,516,436
Ensembl chrNW_004955537:3,505,596...3,516,436
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO (PMID:22228099) MGI PMID:22228099 NCBI chrNW_004955428:18,682,072...18,724,560
Ensembl chrNW_004955428:18,681,856...18,724,560
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chrNW_004955455:7,598,794...7,727,386
Ensembl chrNW_004955455:7,598,794...7,727,386
JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO (MGI:5544381|PMID:24074871)
(PMID:24074871)
UniProt PMID:24074871 MGI:5544381 NCBI chrNW_004955545:2,381,091...2,382,114
Ensembl chrNW_004955545:2,381,156...2,381,978
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (PMID:7926765) MGI PMID:7926765 NCBI chrNW_004955429:6,548,586...6,553,730
Ensembl chrNW_004955429:6,547,731...6,558,105
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) HGNC-UCL PMID:14609955 NCBI chrNW_004955478:6,990,816...7,088,751
Ensembl chrNW_004955478:6,990,833...7,086,721
JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:17476307) MGI PMID:17476307 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5770105|PMID:27042284) UniProt PMID:27042284 MGI:5770105 NCBI chrNW_004955419:8,529,213...8,704,113
Ensembl chrNW_004955419:8,529,177...8,704,113
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004955414:17,444,299...17,557,912
Ensembl chrNW_004955414:17,444,515...17,558,245
JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in ISO (MGI:6739960|PMID:34298015) UniProt PMID:34298015 MGI:6739960 NCBI chrNW_004955403:17,850,119...18,032,722
Ensembl chrNW_004955403:17,850,260...18,034,550
JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:29317443) MGI PMID:29317443 NCBI chrNW_004955420:9,689,076...9,727,806
Ensembl chrNW_004955420:9,690,295...9,727,835
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:1347398|PMID:10545161) UniProt PMID:10545161 MGI:1347398 NCBI chrNW_004955481:7,408,089...7,411,813
Ensembl chrNW_004955481:7,408,205...7,409,128
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in ISO (MGI:4454588|PMID:20460369) UniProt PMID:20460369 MGI:4454588 NCBI chrNW_004955419:7,412,177...7,606,883
Ensembl chrNW_004955419:7,412,331...7,610,353
JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO (PMID:15248193) MGI PMID:15248193 NCBI chrNW_004955524:2,788,672...2,798,068
Ensembl chrNW_004955524:2,788,653...2,796,370
JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) MGI PMID:31004071 NCBI chrNW_004955485:6,418,063...6,515,730
Ensembl chrNW_004955485:6,451,004...6,515,532
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
ISO (PMID:24998929)
(PMID:27602517)
GO_Central
MGI
PMID:24998929 PMID:27602517 NCBI chrNW_004955550:2,115,649...2,175,687
Ensembl chrNW_004955550:2,115,649...2,175,181
JBrowse link
G Cic capicua transcriptional repressor involved_in ISO (MGI:5888926|PMID:28288114) UniProt PMID:28288114 MGI:5888926 NCBI chrNW_004955555:613,549...641,587
Ensembl chrNW_004955555:613,665...638,369
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (MGI:3693257|PMID:17047318) UniProt PMID:17047318 MGI:3693257 NCBI chrNW_004955475:11,722,514...11,725,067 JBrowse link
G Cln5 CLN5 intracellular trafficking protein involved_in ISO (PMID:10992246) UniProt PMID:10992246 NCBI chrNW_004955404:30,229,632...30,235,677
Ensembl chrNW_004955404:30,229,632...30,235,679
JBrowse link
G Cntn4 contactin 4 involved_in ISO PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chrNW_004955421:10,267,471...10,928,734
Ensembl chrNW_004955421:10,266,640...10,723,228
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) BHF-UCL PMID:16107487 NCBI chrNW_004955404:2,196,193...2,327,324
Ensembl chrNW_004955404:2,260,029...2,326,074
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in ISO (PMID:17471495) UniProt PMID:17471495 NCBI chrNW_004955467:13,151,663...13,169,005
Ensembl chrNW_004955467:13,151,957...13,168,696
JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) MGI PMID:33459505 NCBI chrNW_004955447:18,683,173...18,733,546
Ensembl chrNW_004955447:18,680,779...18,734,428
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:5287328|PMID:21778362) UniProt PMID:21778362 MGI:5287328 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chrNW_004955546:1,929,269...1,941,690
Ensembl chrNW_004955546:1,929,269...1,941,690
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004955431:9,975,629...10,302,605
Ensembl chrNW_004955431:9,975,262...10,297,010
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004955490:4,354,307...4,469,055
Ensembl chrNW_004955490:4,354,307...4,469,055
JBrowse link
G Ddit4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chrNW_004955437:19,322,407...19,324,562
Ensembl chrNW_004955437:19,322,407...19,324,562
JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:31256877) UniProt PMID:31256877 NCBI chrNW_004955482:4,733,720...4,754,754
Ensembl chrNW_004955482:4,731,675...4,756,632
JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) UniProt PMID:24781755 MGI:5707577 NCBI chrNW_004955415:12,156,152...12,272,961
Ensembl chrNW_004955415:12,156,152...12,272,961
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:3054504|PMID:15314164) UniProt PMID:15314164 MGI:3054504 NCBI chrNW_004955464:11,788,526...11,811,885
Ensembl chrNW_004955464:11,788,494...11,811,890
JBrowse link
G Dmxl2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004955409:2,934,755...3,089,572
Ensembl chrNW_004955409:2,934,740...3,089,703
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chrNW_004955456:14,057,517...14,058,729
Ensembl chrNW_004955456:14,057,620...14,058,303
JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO (PMID:12051741) UniProt PMID:12051741 NCBI chrNW_004955412:18,708,444...19,022,538
Ensembl chrNW_004955412:18,708,993...19,022,523
JBrowse link
G Eml1 EMAP like 1 involved_in ISO (PMID:24859200)
(MGI:5574528|PMID:24859200)
UniProt PMID:24859200 MGI:5574528 NCBI chrNW_004955438:20,991,432...21,137,570
Ensembl chrNW_004955438:21,078,760...21,137,926
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12091317)
(PMID:12561075)
MGI PMID:12091317 PMID:12561075 NCBI chrNW_004955424:12,666,280...12,683,023
Ensembl chrNW_004955424:12,664,104...12,683,023
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:12091317)
(PMID:12196586), (PMID:12209834), (PMID:12561075)
MGI PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 NCBI chrNW_004955431:22,192,446...22,199,141
Ensembl chrNW_004955431:22,192,446...22,199,279
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:17353897) UniProt PMID:17353897 NCBI chrNW_004955430:19,280,460...19,287,060
Ensembl chrNW_004955430:19,281,602...19,286,867
JBrowse link
G Epha7 EPH receptor A7 involved_in ISO (MGI:3582020|PMID:15902206) UniProt PMID:15902206 MGI:3582020 NCBI chrNW_004955411:19,652,146...19,815,418
Ensembl chrNW_004955411:19,650,515...19,815,512
JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within ISO (PMID:11807041) MGI PMID:11807041 NCBI chrNW_004955495:2,293,587...2,299,302
Ensembl chrNW_004955495:2,293,540...2,298,715
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:14605369) MGI PMID:14605369 NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:12682014) MGI PMID:12682014 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:23591631)
(PMID:20675713)
(PMID:26306834)
MGI PMID:20675713 PMID:23591631 PMID:26306834 NCBI chrNW_004955574:779,672...789,621
Ensembl chrNW_004955574:786,758...788,348
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004955419:20,933,662...20,994,793
Ensembl chrNW_004955419:20,933,662...20,994,793
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chrNW_004955612:46,723...99,012
Ensembl chrNW_004955612:46,724...97,729
JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (MGI:86662|PMID:9096351) BHF-UCL PMID:9096351 MGI:86662 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302
JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) UniProt PMID:34723967 MGI:6792271 NCBI chrNW_004955412:20,096,633...20,108,344
Ensembl chrNW_004955412:20,087,575...20,109,060
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:16168624) MGI PMID:16168624 NCBI chrNW_004955533:2,879,437...2,938,952
Ensembl chrNW_004955533:2,573,599...2,938,952
JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chrNW_004955541:3,477,067...3,494,991
Ensembl chrNW_004955541:3,476,451...3,496,572
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (MGI:6478058|PMID:25792865) UniProt PMID:25792865 MGI:6478058 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:8026071)
(PMID:12435361), (PMID:17395647)
MGI PMID:8026071 PMID:12435361 PMID:17395647 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in ISO (PMID:28851741) UniProt PMID:28851741 NCBI chrNW_004955429:3,641,764...4,053,860
Ensembl chrNW_004955429:3,641,709...4,053,869
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within ISO (PMID:21377456) MGI PMID:21377456 NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO (PMID:12930780) MGI PMID:12930780 NCBI chrNW_004955447:16,714,870...16,715,757 JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004955450:11,525,245...11,719,992
Ensembl chrNW_004955450:11,525,246...11,719,992
JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:11291863) MGI PMID:11291863 NCBI chrNW_004955430:6,955,575...6,956,991
Ensembl chrNW_004955430:6,955,575...6,956,991
JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:15363417) MGI PMID:15363417 NCBI chrNW_004955477:1,294,479...1,302,433
Ensembl chrNW_004955477:1,294,472...1,302,505
JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO (PMID:15363417) MGI PMID:15363417 NCBI chrNW_004955477:1,288,484...1,290,205
Ensembl chrNW_004955477:1,288,314...1,292,496
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) UniProt PMID:18669642 MGI:3811685 NCBI chrNW_004955462:13,555,488...13,574,506
Ensembl chrNW_004955462:13,557,292...13,574,593
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chrNW_004955452:2,056,428...2,141,937
Ensembl chrNW_004955452:2,057,326...2,120,280
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:26234751) MGI PMID:26234751 MGI:71926 NCBI chrNW_004955484:3,567,896...3,948,807
Ensembl chrNW_004955484:3,567,396...3,949,261
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chrNW_004955483:6,598,804...6,601,496
Ensembl chrNW_004955483:6,600,867...6,602,564
JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO (PMID:33122427) UniProt PMID:33122427 NCBI chrNW_004955402:32,532,692...32,550,638
Ensembl chrNW_004955402:32,532,629...32,550,710
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:18930042) MGI PMID:18930042 NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983)
(PMID:22228099)
MGI PMID:19036983 PMID:22228099 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122
JBrowse link
G Igf1r insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666
JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chrNW_004955410:14,567,787...15,420,025
Ensembl chrNW_004955410:14,567,951...15,354,190
JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chrNW_004955404:2,531,484...2,555,383
Ensembl chrNW_004955404:2,531,484...2,555,689
JBrowse link
G Jhy junctional cadherin complex regulator acts_upstream_of_or_within ISO (PMID:23906841) MGI PMID:23906841 NCBI chrNW_004955412:23,721,638...23,781,935
Ensembl chrNW_004955412:23,721,815...23,781,688
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5297001|PMID:21966978) UniProt PMID:21966978 MGI:5297001 NCBI chrNW_004955413:2,703,030...2,711,612
Ensembl chrNW_004955413:2,703,030...2,711,612
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 NCBI chrNW_004955528:737,416...792,885
Ensembl chrNW_004955528:737,416...791,321
JBrowse link
G Kdm4b lysine demethylase 4B involved_in ISO (MGI:6101669|PMID:27023172) UniProt PMID:27023172 MGI:6101669 NCBI chrNW_004955495:4,019,066...4,101,577
Ensembl chrNW_004955495:4,018,770...4,114,604
JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004955406:37,139,168...37,187,543
Ensembl chrNW_004955406:37,139,168...37,187,543
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:26306834), (PMID:29360985)
(PMID:29360985)
MGI PMID:26306834 PMID:29360985 NCBI chrNW_004955405:41,891,430...42,225,066
Ensembl chrNW_004955405:41,931,058...42,139,608
JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:14566948), (PMID:15295034) MGI PMID:14566948 PMID:15295034 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
JBrowse link
G LOC102017503 core histone macro-H2A.2 involved_in ISO (PMID:19734898) UniProt PMID:19734898 NCBI chrNW_004955437:21,126,581...21,186,308
Ensembl chrNW_004955437:21,126,006...21,186,797
JBrowse link
G Maco1 macoilin 1 involved_in ISO (MGI:3052424|PMID:15255972) BHF-UCL PMID:15255972 MGI:3052424 NCBI chrNW_004955452:4,966,357...5,030,868
Ensembl chrNW_004955452:4,968,500...5,030,868
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (MGI:4887328|PMID:17586838) UniProt PMID:17586838 MGI:4887328 NCBI chrNW_004955415:23,398,409...25,239,184
Ensembl chrNW_004955415:23,398,776...25,226,450
JBrowse link
G Mast1 microtubule associated serine/threonine kinase 1 involved_in ISO (MGI:6269299|PMID:30449657)
(PMID:30449657)
UniProt PMID:30449657 MGI:6269299 NCBI chrNW_004955415:31,907,660...31,935,769
Ensembl chrNW_004955415:31,907,630...31,939,762
JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISO (MGI:7285999|PMID:35482892) UniProt PMID:35482892 MGI:7285999 NCBI chrNW_004955484:9,434,959...9,442,711
Ensembl chrNW_004955484:9,434,523...9,442,711
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chrNW_004955437:5,547,684...5,596,980
Ensembl chrNW_004955437:5,547,666...5,601,156
JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:10882104) MGI PMID:10882104 NCBI chrNW_004955451:14,204,326...14,237,809
Ensembl chrNW_004955451:14,202,744...14,237,797
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of
acts_upstream_of_or_within
ISO (MGI:6196220|PMID:30074985)
(PMID:26005865), (PMID:26005868)
ARUK-UCL PMID:26005865 PMID:26005868 PMID:30074985 MGI:6196220 NCBI chrNW_004955452:17,430,850...17,443,830
Ensembl chrNW_004955452:17,430,219...17,443,830
JBrowse link
G Mink1 misshapen like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) UniProt PMID:10708748 MGI:1354211 NCBI chrNW_004955467:10,256,722...10,312,011
Ensembl chrNW_004955467:10,256,434...10,313,834
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004955467:8,298,514...8,427,459
Ensembl chrNW_004955467:8,298,527...8,427,459
JBrowse link
G Napa NSF attachment protein alpha acts_upstream_of_or_within ISO (PMID:11706940) MGI PMID:11706940 NCBI chrNW_004955574:1,330,911...1,353,392
Ensembl chrNW_004955574:1,330,300...1,353,576
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chrNW_004955422:26,564,535...26,639,516
Ensembl chrNW_004955422:26,564,037...26,632,675
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within
ISO (PMID:14765537)
(PMID:28916769)
UniProt
MGI
PMID:14765537 PMID:28916769 NCBI chrNW_004955446:13,764,907...13,864,824
Ensembl chrNW_004955446:13,764,907...13,864,824
JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:30932003) MGI PMID:30932003 NCBI chrNW_004955423:20,011,488...20,816,686
Ensembl chrNW_004955423:20,011,615...20,813,879
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (PMID:23863479) MGI PMID:23863479 NCBI chrNW_004955455:3,862,804...3,950,669
Ensembl chrNW_004955455:3,862,347...3,951,891
JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:30388402) UniProt PMID:30388402 NCBI chrNW_004955434:17,192,188...17,603,503
Ensembl chrNW_004955434:17,198,571...17,415,084
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270)
MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO (PMID:8291537) BHF-UCL PMID:8291537 NCBI chrNW_004955426:21,666,958...21,841,515
Ensembl chrNW_004955426:21,666,857...21,841,515
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11971878)
(PMID:12930780)
(PMID:8557195)
UniProt
MGI
PMID:8557195 PMID:11971878 PMID:12930780 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004955462:7,879,754...8,073,207
Ensembl chrNW_004955462:7,880,157...8,073,186
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:12397106) MGI PMID:12397106 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within ISO (PMID:14994267) MGI PMID:14994267 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chrNW_004955413:3,207,669...3,273,371
Ensembl chrNW_004955413:3,207,123...3,273,491
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (PMID:31383820) MGI PMID:31383820 NCBI chrNW_004955495:2,318,840...2,330,966
Ensembl chrNW_004955495:2,318,471...2,330,508
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:27486780) MGI PMID:27486780 NCBI chrNW_004955451:16,098,495...16,112,985
Ensembl chrNW_004955451:16,098,586...16,112,630
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO (PMID:10409504), (PMID:12196586) MGI PMID:10409504 PMID:12196586 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pcdh18 protocadherin 18 involved_in ISO (MGI:2154581|PMID:11716507) UniProt PMID:11716507 MGI:2154581 NCBI chrNW_004955428:5,846,697...5,859,028
Ensembl chrNW_004955428:5,846,699...5,859,099
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) UniProt PMID:17554007 MGI:3712712 NCBI chrNW_004955413:33,297,617...33,314,371
Ensembl chrNW_004955413:33,298,317...33,309,961
JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO (PMID:26306834) MGI PMID:26306834 NCBI chrNW_004955464:12,076,815...12,086,961
Ensembl chrNW_004955464:12,077,406...12,086,700
JBrowse link
G Pomk protein O-mannose kinase acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004955457:13,299,176...13,318,535
Ensembl chrNW_004955457:13,309,564...13,317,825
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO (PMID:7637805) UniProt PMID:7637805 NCBI chrNW_004955452:17,518,345...17,549,112
Ensembl chrNW_004955452:17,529,115...17,549,664
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:16687486) MGI PMID:16687486 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:9153393) MGI PMID:9153393 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in ISO (PMID:11704759) BHF-UCL PMID:11704759 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO (PMID:24656866) UniProt PMID:24656866 NCBI chrNW_004955532:1,093,444...1,100,591
Ensembl chrNW_004955532:1,092,125...1,100,603
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) BHF-UCL PMID:20512159 NCBI chrNW_004955440:2,551,015...2,645,938
Ensembl chrNW_004955440:2,550,982...2,646,331
JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within ISO (PMID:15789424) MGI PMID:15789424 NCBI chrNW_004955402:43,408,933...43,414,697
Ensembl chrNW_004955402:43,410,404...43,414,306
JBrowse link
G Reln reelin acts_upstream_of_or_within ISO (PMID:12223565) MGI PMID:12223565 NCBI chrNW_004955410:8,424,439...8,863,966
Ensembl chrNW_004955410:8,424,394...8,863,969
JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) UniProt PMID:10197527 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within
ISO (PMID:25565929)
(PMID:38172607)
HGNC
MGI
PMID:25565929 PMID:38172607 NCBI chrNW_004955442:12,694,197...12,700,181
Ensembl chrNW_004955442:12,694,197...12,700,181
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904), (PMID:17558409) MGI PMID:17553904 PMID:17558409 NCBI chrNW_004955433:11,321,504...11,423,981
Ensembl chrNW_004955433:11,322,590...11,424,569
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004955435:5,880,266...5,882,823
Ensembl chrNW_004955435:5,880,288...5,881,436
JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) UniProt PMID:26203146 MGI:5694521 NCBI chrNW_004955405:35,984,667...36,043,581
Ensembl chrNW_004955405:35,984,667...36,043,628
JBrowse link
G Selenop selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chrNW_004955426:26,951,003...26,961,839 JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chrNW_004955451:4,505,318...4,530,387 JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in ISO (PMID:31197650)
(MGI:6467717|PMID:31197650)
UniProt PMID:31197650 MGI:6467717 NCBI chrNW_004955493:7,808,652...7,834,886
Ensembl chrNW_004955493:7,808,652...7,834,880
JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) UniProt PMID:16249884 NCBI chrNW_004955543:1,810,125...2,046,144 JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12569128) MGI PMID:12569128 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:28886095) MGI PMID:28886095 NCBI chrNW_004955434:8,790,685...8,879,757
Ensembl chrNW_004955434:8,790,685...8,879,757
JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in ISO (MGI:2178849|PMID:11984597) UniProt PMID:11984597 MGI:2178849 NCBI chrNW_004955418:1,176,390...1,192,270
Ensembl chrNW_004955418:1,176,000...1,186,940
JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in ISO (MGI:5634854|PMID:25704603) UniProt PMID:25704603 MGI:5634854 NCBI chrNW_004955435:13,668,690...13,717,401
Ensembl chrNW_004955435:13,668,681...13,720,431
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17035536) MGI PMID:17035536 NCBI chrNW_004955428:5,238,460...5,309,085
Ensembl chrNW_004955428:5,237,865...5,309,085
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14609955)
(PMID:22516202)
HGNC-UCL
MGI
PMID:14609955 PMID:22516202 NCBI chrNW_004955473:5,498,738...5,572,863
Ensembl chrNW_004955473:5,498,674...5,573,169
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in ISO (MGI:5775676|PMID:27018474) UniProt PMID:27018474 MGI:5775676 NCBI chrNW_004955555:1,463,031...1,481,411
Ensembl chrNW_004955555:1,459,451...1,481,411
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO (PMID:32442410) UniProt PMID:32442410 NCBI chrNW_004955414:30,965,626...31,532,473
Ensembl chrNW_004955414:30,971,920...31,335,263
JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004955506:5,902,079...5,906,639
Ensembl chrNW_004955506:5,902,345...5,904,988
JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within ISO (PMID:16314531) MGI PMID:16314531 NCBI chrNW_004955559:1,921,479...1,929,450
Ensembl chrNW_004955559:1,917,301...1,928,493
JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chrNW_004955453:14,727,779...14,753,534
Ensembl chrNW_004955453:14,728,583...14,753,534
JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO (PMID:15690082) MGI PMID:15690082 NCBI chrNW_004955435:12,215,665...12,270,769
Ensembl chrNW_004955435:12,215,665...12,274,465
JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) UniProt PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chrNW_004955537:2,333,657...2,337,012
Ensembl chrNW_004955537:2,333,657...2,337,037
JBrowse link
G Tbc1d23 TBC1 domain family member 23 involved_in ISO (PMID:28823706), (PMID:28823707) UniProt PMID:28823706 PMID:28823707 NCBI chrNW_004955427:1,811,132...1,849,348
Ensembl chrNW_004955427:1,810,096...1,852,828
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
JBrowse link
G Tmx2 thioredoxin related transmembrane protein 2 involved_in ISO (PMID:31735293) UniProt PMID:31735293 NCBI chrNW_004955511:2,632,434...2,641,531
Ensembl chrNW_004955511:2,632,507...2,638,763
JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) UniProt PMID:31630790 NCBI chrNW_004955477:10,909,213...10,932,833
Ensembl chrNW_004955477:10,907,298...10,932,649
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614), (PMID:19286674) MGI PMID:11406614 PMID:19286674 NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chrNW_004955468:12,919,031...12,922,740
Ensembl chrNW_004955468:12,919,031...12,922,740
JBrowse link
G Ufm1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chrNW_004955431:7,860,706...7,872,972
Ensembl chrNW_004955431:7,860,706...7,872,972
JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO (PMID:31820119) UniProt PMID:31820119 NCBI chrNW_004955424:20,444,974...20,490,016
Ensembl chrNW_004955424:20,444,405...20,490,379
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chrNW_004955420:28,633,011...29,031,161
Ensembl chrNW_004955420:28,633,726...29,028,025
JBrowse link
G Unc5c unc-5 netrin receptor C acts_upstream_of_or_within ISO (PMID:9126743)
(PMID:10818148)
(PMID:1401878), (PMID:9550145)
MGI PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 NCBI chrNW_004955405:5,791,286...6,049,952
Ensembl chrNW_004955405:5,797,590...5,950,544
JBrowse link
G Upf3b UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chrNW_004955534:176,553...193,033
Ensembl chrNW_004955534:176,522...193,319
JBrowse link
G Utp3 UTP3 small subunit processome component involved_in ISO (MGI:2136064|PMID:11404095) UniProt PMID:11404095 MGI:2136064 NCBI chrNW_004955447:2,290,916...2,292,419
Ensembl chrNW_004955447:2,290,981...2,292,405
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601035)
(PMID:10601036)
MGI PMID:10601035 PMID:10601036 NCBI chrNW_004955431:21,853,636...21,857,547
Ensembl chrNW_004955431:21,853,636...21,857,547
JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) MGI PMID:37573958 NCBI chrNW_004955417:14,570,399...15,228,106
Ensembl chrNW_004955417:14,570,904...15,227,877
JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chrNW_004955435:12,414,964...12,479,883
Ensembl chrNW_004955435:12,414,600...12,466,040
JBrowse link
G Zic1 Zic family member 1 involved_in ISO (MGI:78770|PMID:7931345)
(PMID:8542595)
UniProt PMID:7931345 PMID:8542595 MGI:78770 NCBI chrNW_004955474:10,029,226...10,033,104
Ensembl chrNW_004955474:10,029,174...10,033,380
JBrowse link
G Znf335 zinc finger protein 335 involved_in ISO (MGI:5468205|PMID:23178126)
(PMID:23178126)
UniProt PMID:23178126 MGI:5468205 NCBI chrNW_004955445:11,334,742...11,354,584
Ensembl chrNW_004955445:11,335,908...11,354,300
JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chrNW_004955439:14,324,910...14,428,846
Ensembl chrNW_004955439:14,326,793...14,428,850
JBrowse link
G Akt3 AKT serine/threonine kinase 3 acts_upstream_of_or_within ISO (PMID:15713641) MGI PMID:15713641 NCBI chrNW_004955406:6,907,876...7,163,672 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004955422:18,825,756...18,843,820
Ensembl chrNW_004955422:18,825,756...18,844,036
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004955433:14,266,190...14,321,780
Ensembl chrNW_004955433:14,266,190...14,296,929
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004955450:4,624,634...4,668,470
Ensembl chrNW_004955450:4,631,266...4,662,719
JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chrNW_004955402:15,829,895...16,049,874
Ensembl chrNW_004955402:15,831,110...16,049,890
JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chrNW_004955424:5,985,170...7,055,830
Ensembl chrNW_004955424:5,986,073...6,911,826
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:25100583)
(PMID:23178126)
MGI PMID:23178126 PMID:25100583 NCBI chrNW_004955424:12,666,280...12,683,023
Ensembl chrNW_004955424:12,664,104...12,683,023
JBrowse link
G Fancc FA complementation group C acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004955422:22,031,825...22,246,478
Ensembl chrNW_004955422:22,032,258...22,247,044
JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004955561:1,460,080...1,538,026
Ensembl chrNW_004955561:1,464,869...1,538,045
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO (PMID:18032602) MGI PMID:18032602 NCBI chrNW_004955415:20,292,311...20,315,850
Ensembl chrNW_004955415:20,292,663...20,300,797
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (PMID:9063735) BHF-UCL PMID:9063735 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004955407:42,735,078...42,835,851
Ensembl chrNW_004955407:42,735,188...42,835,465
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chrNW_004955413:33,660,025...33,714,649
Ensembl chrNW_004955413:33,660,022...33,712,796
JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (PMID:18165320) MGI PMID:18165320 NCBI chrNW_004955449:11,879,070...12,159,981
Ensembl chrNW_004955449:11,879,016...12,160,065
JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in ISO (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chrNW_004955426:20,587,312...20,747,034
Ensembl chrNW_004955426:20,587,152...20,752,812
JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO (PMID:30624672), (PMID:31207318) UniProt PMID:30624672 PMID:31207318 NCBI chrNW_004955422:20,091,682...20,102,371
Ensembl chrNW_004955422:20,091,682...20,102,938
JBrowse link
G Znf335 zinc finger protein 335 acts_upstream_of_or_within ISO (PMID:23178126) MGI PMID:23178126 NCBI chrNW_004955445:11,334,742...11,354,584
Ensembl chrNW_004955445:11,335,908...11,354,300
JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO (PMID:7903221) MGI PMID:7903221 NCBI chrNW_004955425:16,055,748...16,068,429
Ensembl chrNW_004955425:16,055,748...16,060,048
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO (PMID:9367425) MGI PMID:9367425 NCBI chrNW_004955410:28,794,878...28,798,231
Ensembl chrNW_004955410:28,794,878...28,798,231
JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO (PMID:7925021) MGI PMID:7925021 NCBI chrNW_004955445:16,219,675...16,222,913 JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chrNW_004955457:14,268,078...14,287,050 JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:15548218) MGI PMID:15548218 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO (PMID:11872605) UniProt PMID:11872605 NCBI chrNW_004955432:20,205,369...20,589,608
Ensembl chrNW_004955432:20,334,237...20,589,352
JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:10357893) MGI PMID:10357893 NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460
JBrowse link
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
G Phox2b paired like homeobox 2B acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chrNW_004955443:5,935,975...5,938,747
Ensembl chrNW_004955443:5,935,975...5,938,747
JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:4887555|PMID:19046377) UniProt PMID:19046377 MGI:4887555 NCBI chrNW_004955450:14,867,941...14,902,990 JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix-loop-helix 2 acts_upstream_of_or_within ISO (MGI:3723363|PMID:17573818) UniProt PMID:17573818 MGI:3723363 NCBI chrNW_004955435:19,070,715...19,073,678
Ensembl chrNW_004955435:19,068,761...19,075,257
JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272) MGI PMID:8955272 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) UniProt PMID:21122816 MGI:4881530 NCBI chrNW_004955470:4,213,006...4,220,167
Ensembl chrNW_004955470:4,213,006...4,220,169
JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) MGI PMID:25099998 NCBI chrNW_004955442:317,334...442,514
Ensembl chrNW_004955442:314,486...442,088
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (MGI:5463669|PMID:23056358) UniProt PMID:23056358 MGI:5463669 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402
JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10970885) MGI PMID:10970885 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725) MGI PMID:15677725 NCBI chrNW_004955509:5,326,145...5,338,250 JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004955492:6,946,528...7,239,328
Ensembl chrNW_004955492:6,953,389...7,239,328
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) DFLAT PMID:20624590 MGI:4821185 NCBI chrNW_004955412:13,640,693...13,713,926
Ensembl chrNW_004955412:13,642,078...13,711,850
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:10729342) MGI PMID:10729342 NCBI chrNW_004955431:22,192,446...22,199,141
Ensembl chrNW_004955431:22,192,446...22,199,279
JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chrNW_004955436:4,642,584...4,646,172
Ensembl chrNW_004955436:4,642,584...4,646,172
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:16613831) MGI PMID:16613831 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO (PMID:10325223) MGI PMID:10325223 NCBI chrNW_004955482:9,682,671...9,691,155
Ensembl chrNW_004955482:9,682,526...9,691,530
JBrowse link
G Ncor2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
JBrowse link
G Nfib nuclear factor I B involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004955434:17,192,188...17,603,503
Ensembl chrNW_004955434:17,198,571...17,415,084
JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Ngf nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chrNW_004955414:19,850,523...19,904,879
Ensembl chrNW_004955414:19,850,530...19,905,266
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) UniProt PMID:18694563 MGI:3813369 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895
JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) BHF-UCL PMID:12843296 MGI:2667422 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chrNW_004955574:1,221,942...1,229,634
Ensembl chrNW_004955574:1,221,187...1,231,655
JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chrNW_004955403:50,899,658...50,959,077
Ensembl chrNW_004955403:50,899,523...50,959,071
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (PMID:19842188) MGI PMID:19842188 NCBI chrNW_004955417:27,465,730...27,493,752
Ensembl chrNW_004955417:27,465,701...27,494,790
JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:2679774|PMID:14557550), (MGI:3045659|PMID:15121182) ParkinsonsUK-UCL PMID:14557550 PMID:15121182 MGI:2679774 MGI:3045659 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874)
(MGI:4461115|PMID:20018874)
ParkinsonsUK-UCL
CACAO
PMID:20018874 MGI:4461115 NCBI chrNW_004955432:22,988,208...23,024,530
Ensembl chrNW_004955432:22,984,170...23,027,705
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) ParkinsonsUK-UCL PMID:14557550 MGI:2679774 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO (PMID:15091337) MGI PMID:15091337 NCBI chrNW_004955464:2,325,529...2,721,497
Ensembl chrNW_004955464:2,455,346...2,724,358
JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:34211179)
(MGI:6742151|PMID:34211179)
UniProt PMID:34211179 MGI:6742151 NCBI chrNW_004955441:20,248,578...20,378,038
Ensembl chrNW_004955441:20,248,578...20,378,038
JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO (PMID:16357211) MGI PMID:16357211 NCBI chrNW_004955482:7,504,554...7,533,605
Ensembl chrNW_004955482:7,504,532...7,528,542
JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO (PMID:30985297)
(MGI:6467701|PMID:30985297)
UniProt PMID:30985297 MGI:6467701 NCBI chrNW_004955565:2,006,154...2,029,921 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:5576986|PMID:24487234) ARUK-UCL PMID:24487234 MGI:5576986 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230
JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISO (MGI:1352955|PMID:10655590) UniProt PMID:10655590 MGI:1352955 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558
JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:1931348|PMID:2202907) BHF-UCL PMID:2202907 MGI:1931348 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within
ISO PMID:12210128
(MGI:3697245|PMID:17060448)
UniProt
ARUK-UCL
PMID:12210128 PMID:17060448 MGI:3697245 RGD:631995 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chrNW_004955422:1,266,686...1,354,323
Ensembl chrNW_004955422:1,279,158...1,353,894
JBrowse link
G Cntn1 contactin 1 involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chrNW_004955500:154,704...540,546
Ensembl chrNW_004955500:245,896...540,600
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (PMID:17952069) MGI PMID:17952069 NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599
JBrowse link
G Mag myelin associated glycoprotein involved_in ISO (PMID:31641127) MGI PMID:31641127 NCBI chrNW_004955468:4,584,068...4,598,772
Ensembl chrNW_004955468:4,584,162...4,598,914
JBrowse link
G Mios meiosis regulator for oocyte development involved_in ISO (MGI:6870482|PMID:35022234) UniProt PMID:35022234 MGI:6870482 NCBI chrNW_004955432:14,658,624...14,693,116
Ensembl chrNW_004955432:14,657,973...14,693,116
JBrowse link
G Mobp myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chrNW_004955420:29,902,036...29,957,364 JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (PMID:26188006)
(MGI:5437806|PMID:22915103)
UniProt PMID:22915103 PMID:26188006 MGI:5437806 NCBI chrNW_004955414:12,649,128...13,364,523
Ensembl chrNW_004955414:12,867,974...13,364,580
JBrowse link
G Tlr2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in ISO (PMID:21543606) Alzheimers_University_of_Toronto PMID:21543606 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876
JBrowse link
G Fa2h fatty acid 2-hydroxylase acts_upstream_of_or_within ISO (PMID:21491498)
(PMID:18815260)
MGI PMID:18815260 PMID:21491498 NCBI chrNW_004955484:2,726,496...2,775,763
Ensembl chrNW_004955484:2,726,362...2,775,903
JBrowse link
G Myrf myelin regulatory factor involved_in ISO (MGI:5437779|PMID:22956843) UniProt PMID:22956843 MGI:5437779 NCBI chrNW_004955511:5,927,103...5,949,289
Ensembl chrNW_004955511:5,927,698...5,942,242
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspa aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chrNW_004955467:13,277,014...13,332,658
Ensembl chrNW_004955467:13,280,254...13,316,114
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004955445:8,471,684...8,559,672
Ensembl chrNW_004955445:8,534,220...8,559,672
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004955402:18,945,013...19,024,132
Ensembl chrNW_004955402:18,942,872...19,024,132
JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (PMID:18650339) MGI PMID:18650339 NCBI chrNW_004955406:40,831,897...40,862,445
Ensembl chrNW_004955406:40,831,850...40,858,569
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISO (PMID:28374019) UniProt PMID:28374019 NCBI chrNW_004955451:16,535,924...16,547,800
Ensembl chrNW_004955451:16,536,416...16,547,213
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chrNW_004955491:1,983,002...3,982,510
Ensembl chrNW_004955491:1,984,050...3,981,830
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:17006542) MGI PMID:17006542 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chrNW_004955483:6,598,804...6,601,496
Ensembl chrNW_004955483:6,600,867...6,602,564
JBrowse link
G Kcnj10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chrNW_004955468:11,828,525...11,860,365
Ensembl chrNW_004955468:11,828,525...11,860,365
JBrowse link
G Mag myelin associated glycoprotein involved_in ISO (MGI:1202048|PMID:9482783) UniProt PMID:9482783 MGI:1202048 NCBI chrNW_004955468:4,584,068...4,598,772
Ensembl chrNW_004955468:4,584,162...4,598,914
JBrowse link
G Mal mal, T cell differentiation protein acts_upstream_of ISO (PMID:15337780) MGI PMID:15337780 NCBI chrNW_004955470:3,372,577...3,396,868
Ensembl chrNW_004955470:3,372,577...3,398,836
JBrowse link
G Myrf myelin regulatory factor involved_in ISO (MGI:3850982|PMID:19596243), (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:19596243 PMID:24204311 PMID:27532821 MGI:3850982 MGI:5544144 MGI:5805298 NCBI chrNW_004955511:5,927,103...5,949,289
Ensembl chrNW_004955511:5,927,698...5,942,242
JBrowse link
G Ncstn nicastrin acts_upstream_of_or_within ISO (PMID:27008863) MGI PMID:27008863 NCBI chrNW_004955468:12,111,078...12,126,404
Ensembl chrNW_004955468:12,111,078...12,127,033
JBrowse link
G Nkx6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO (PMID:15601927) MGI PMID:15601927 NCBI chrNW_004955477:10,386,033...10,387,423
Ensembl chrNW_004955477:10,386,033...10,387,423
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:1694232) MGI PMID:1694232 NCBI chrNW_004955548:781,522...797,246
Ensembl chrNW_004955548:781,015...797,935
JBrowse link
G Sox10 SRY-box transcription factor 10 involved_in ISO (MGI:5544144|PMID:24204311), (MGI:5805298|PMID:27532821) UniProt PMID:24204311 PMID:27532821 MGI:5544144 MGI:5805298 NCBI chrNW_004955413:24,313,311...24,323,112
Ensembl chrNW_004955413:24,311,783...24,323,315
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chrNW_004955420:28,633,011...29,031,161
Ensembl chrNW_004955420:28,633,726...29,028,025
JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISO (MGI:1933687|PMID:11283609) UniProt PMID:11283609 MGI:1933687 NCBI chrNW_004955574:915,604...984,744
Ensembl chrNW_004955574:915,325...984,744
JBrowse link
G Arhgef28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004955425:26,690,863...26,987,900
Ensembl chrNW_004955425:26,690,681...26,989,187
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004955445:8,471,684...8,559,672
Ensembl chrNW_004955445:8,534,220...8,559,672
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chrNW_004955402:18,945,013...19,024,132
Ensembl chrNW_004955402:18,942,872...19,024,132
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (PMID:15208636) MGI PMID:15208636 NCBI chrNW_004955467:8,432,806...8,486,563
Ensembl chrNW_004955467:8,432,806...8,468,155
JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chrNW_004955478:5,686,639...6,090,356
Ensembl chrNW_004955478:5,686,640...6,083,967
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) CACAO PMID:16675393 MGI:3629385 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004955461:14,337,914...14,622,779
Ensembl chrNW_004955461:14,337,914...14,556,931
JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chrNW_004955464:8,847,401...10,195,184
Ensembl chrNW_004955464:8,880,455...10,193,907
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:15169849)
(PMID:16469766)
MGI PMID:15169849 PMID:16469766 NCBI chrNW_004955405:37,941,243...37,943,641
Ensembl chrNW_004955405:37,941,243...37,943,641
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chrNW_004955419:8,529,213...8,704,113
Ensembl chrNW_004955419:8,529,177...8,704,113
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:20020054) MGI PMID:20020054 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:8855328) MGI PMID:8855328 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:16680166) MGI PMID:16680166 NCBI chrNW_004955409:31,672,960...31,674,970 JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chrNW_004955443:1,126,223...1,514,291
Ensembl chrNW_004955443:1,132,860...1,514,376
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:10357893) MGI PMID:10357893 NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460
JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISO (PMID:23332916) UniProt PMID:23332916 NCBI chrNW_004955472:553,556...564,411
Ensembl chrNW_004955472:553,556...564,411
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (PMID:9886073) MGI PMID:9886073 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (PMID:10592285) MGI PMID:10592285 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lingo1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chrNW_004955450:2,435,768...2,493,387
Ensembl chrNW_004955450:2,435,662...2,452,213
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chrNW_004955419:1,782,566...1,857,375
Ensembl chrNW_004955419:1,782,566...1,857,375
JBrowse link
G Map2 microtubule associated protein 2 involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004955457:5,678,826...5,816,114
Ensembl chrNW_004955457:5,678,436...5,875,024
JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chrNW_004955457:14,268,078...14,287,050 JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO (MGI:5789071|PMID:27223325) UniProt PMID:27223325 MGI:5789071 NCBI chrNW_004955574:360,822...361,459 JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:20846339) DFLAT PMID:20846339 NCBI chrNW_004955410:26,348,388...26,355,232
Ensembl chrNW_004955410:26,348,504...26,355,297
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in ISO (MGI:1343962|PMID:8402890) UniProt PMID:8402890 MGI:1343962 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISO (MGI:4454735|PMID:20399730) UniProt PMID:20399730 MGI:4454735 NCBI chrNW_004955466:2,871,445...2,937,296
Ensembl chrNW_004955466:2,874,058...2,918,122
JBrowse link
G Taok1 TAO kinase 1 involved_in ISO (PMID:33565190)
(MGI:6707836|PMID:33565190)
UniProt PMID:33565190 MGI:6707836 NCBI chrNW_004955481:3,698,686...3,836,209
Ensembl chrNW_004955481:3,705,202...3,772,116
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (PMID:31537781) MGI PMID:31537781 NCBI chrNW_004955412:19,670,590...19,672,495 JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:15469980) MGI PMID:15469980 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO (PMID:15469980) MGI PMID:15469980 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Brinp2 BMP/retinoic acid inducible neural specific 2 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chrNW_004955406:16,748,824...16,840,924
Ensembl chrNW_004955406:16,748,824...16,844,093
JBrowse link
G Brinp3 BMP/retinoic acid inducible neural specific 3 involved_in ISO (MGI:5521281|PMID:20025061) UniProt PMID:20025061 MGI:5521281 NCBI chrNW_004955406:27,870,115...28,240,328
Ensembl chrNW_004955406:27,869,456...28,238,978
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chrNW_004955410:28,788,245...28,790,971
Ensembl chrNW_004955410:28,787,817...28,790,962
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:15148302)
(PMID:17670789)
MGI PMID:15148302 PMID:17670789 NCBI chrNW_004955462:11,328,583...11,484,438
Ensembl chrNW_004955462:11,329,676...11,477,770
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chrNW_004955579:51,862...74,985 JBrowse link
G Nkx6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:19592574) MGI PMID:19592574 NCBI chrNW_004955474:5,211,281...5,214,785 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within ISO (PMID:11113533) MGI PMID:11113533 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Pou4f1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272)
(PMID:8876243)
MGI PMID:8876243 PMID:8955272 NCBI chrNW_004955404:28,812,762...28,818,024 JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571630) MGI PMID:16571630 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chrNW_004955413:18,831,931...19,676,371
Ensembl chrNW_004955413:18,831,931...19,204,217
JBrowse link
G Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (MGI:1353269|PMID:10640720) UniProt PMID:10640720 MGI:1353269 NCBI chrNW_004955408:31,954,622...32,465,463
Ensembl chrNW_004955408:31,957,882...32,465,461
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO (PMID:16292311) MGI PMID:16292311 NCBI chrNW_004955464:11,304,611...11,317,420
Ensembl chrNW_004955464:11,310,628...11,315,924
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:11344259), (PMID:14687550)
(PMID:15608630)
MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Dclk1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004955431:9,975,629...10,302,605
Ensembl chrNW_004955431:9,975,262...10,297,010
JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chrNW_004955490:4,354,307...4,469,055
Ensembl chrNW_004955490:4,354,307...4,469,055
JBrowse link
G Ephb1 EPH receptor B1 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890
JBrowse link
G Ephb2 EPH receptor B2 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445
JBrowse link
G Ephb3 EPH receptor B3 acts_upstream_of_or_within ISO (PMID:12971893) MGI PMID:12971893 NCBI chrNW_004955420:22,900,588...22,919,924
Ensembl chrNW_004955420:22,901,337...22,920,712
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3759703|PMID:17901218)
(PMID:18031680)
UniProt
MGI
PMID:17901218 PMID:18031680 MGI:3759703 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within ISO (PMID:10585298) MGI PMID:10585298 NCBI chrNW_004955449:16,928,780...16,944,536
Ensembl chrNW_004955449:16,937,794...16,945,731
JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004955433:4,443,339...4,463,687
Ensembl chrNW_004955433:4,459,669...4,462,928
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within ISO (PMID:17197442) MGI PMID:17197442 NCBI chrNW_004955578:730,916...813,740
Ensembl chrNW_004955578:731,814...810,065
JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chrNW_004955404:10,731,987...10,735,599 JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892
JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:8855328) MGI PMID:8855328 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO (PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
UniProt PMID:24766809 PMID:24766810 MGI:5568133 NCBI chrNW_004955511:2,588,825...2,592,108
Ensembl chrNW_004955511:2,588,825...2,593,192
JBrowse link
G Dixdc1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chrNW_004955412:13,640,693...13,713,926
Ensembl chrNW_004955412:13,642,078...13,711,850
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:20798045) MGI PMID:20798045 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235
JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chrNW_004955419:20,933,662...20,994,793
Ensembl chrNW_004955419:20,933,662...20,994,793
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) CACAO PMID:21419114 MGI:5050602 NCBI chrNW_004955476:614,215...996,450
Ensembl chrNW_004955476:613,512...996,535
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISO (MGI:3621523|PMID:16504944) UniProt PMID:16504944 MGI:3621523 NCBI chrNW_004955451:14,368,605...14,370,544 JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chrNW_004955456:7,416,343...7,484,889
Ensembl chrNW_004955456:7,415,589...7,485,515
JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:10407039) MGI PMID:10407039 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203
JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (PMID:28556830) MGI PMID:28556830 NCBI chrNW_004955442:18,130,282...18,152,153
Ensembl chrNW_004955442:18,130,987...18,137,412
JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004955458:5,181,761...5,193,500
Ensembl chrNW_004955458:5,185,225...5,193,196
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004955459:8,892,917...9,124,672
Ensembl chrNW_004955459:8,892,869...9,118,499
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004955407:42,735,078...42,835,851
Ensembl chrNW_004955407:42,735,188...42,835,465
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Trnp1 TMF1 regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) UniProt PMID:23622239 MGI:5490679 NCBI chrNW_004955452:6,335,463...6,341,657 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004955547:467,331...501,172
Ensembl chrNW_004955547:466,777...501,490
JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) DFLAT PMID:10096022 MGI:2178952 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004955416:9,412,297...9,518,561
Ensembl chrNW_004955416:9,412,297...9,559,655
JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:20153830) MGI PMID:20153830 NCBI chrNW_004955476:11,339,586...11,341,996
Ensembl chrNW_004955476:11,339,586...11,341,996
JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 acts_upstream_of_or_within ISO (PMID:17409116) MGI PMID:17409116 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645
JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004955433:7,516,487...7,519,929
Ensembl chrNW_004955433:7,516,487...7,519,929
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004955405:3,291,793...4,411,249
Ensembl chrNW_004955405:3,344,763...4,443,836
JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) MGI PMID:17984326 NCBI chrNW_004955477:10,792,066...10,850,457
Ensembl chrNW_004955477:10,792,394...10,850,186
JBrowse link
G Mtpn myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chrNW_004955494:6,805,518...6,844,454
Ensembl chrNW_004955494:6,805,262...6,845,394
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within
involved_in
ISO (PMID:21800304)
(PMID:23042739)
MGI PMID:21800304 PMID:23042739 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4839424|PMID:20537373) BHF-UCL PMID:20537373 MGI:4839424 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) BHF-UCL PMID:20808958 MGI:4849596 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) MGI PMID:9405095 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895
JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in ISO (MGI:5689090|PMID:22095825) UniProt PMID:22095825 MGI:5689090 NCBI chrNW_004955559:1,008,208...1,013,023
Ensembl chrNW_004955559:1,008,208...1,013,023
JBrowse link
G Egf epidermal growth factor acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004955496:325,954...401,430
Ensembl chrNW_004955496:328,075...401,569
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004955428:17,840,554...17,894,779
Ensembl chrNW_004955428:17,840,628...17,894,773
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chrNW_004955453:538,066...541,415
Ensembl chrNW_004955453:538,280...540,306
JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO (PMID:20498273) MGI PMID:20498273 NCBI chrNW_004955407:37,993,657...38,002,986
Ensembl chrNW_004955407:37,993,657...38,002,985
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chrNW_004955486:4,303,573...4,695,800
Ensembl chrNW_004955486:4,443,723...4,695,800
JBrowse link
G Rora RAR related orphan receptor A involved_in ISO (MGI:2683830|PMID:14687547) UniProt PMID:14687547 MGI:2683830 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of
ISO (MGI:5689090|PMID:22095825)
(PMID:10027293)
(MGI:2683830|PMID:14687547)
UniProt
MGI
PMID:10027293 PMID:14687547 PMID:22095825 MGI:2683830 MGI:5689090 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Znf423 zinc finger protein 423 acts_upstream_of_or_within ISO (PMID:27727273) MGI PMID:27727273 NCBI chrNW_004955433:7,700,965...8,018,437
Ensembl chrNW_004955433:7,700,734...8,009,451
JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO (PMID:18327254) MGI PMID:18327254 NCBI chrNW_004955489:3,914,137...4,116,780
Ensembl chrNW_004955489:3,914,633...4,116,825
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) ARUK-UCL PMID:26323690 MGI:5700621 NCBI chrNW_004955416:9,412,297...9,518,561
Ensembl chrNW_004955416:9,412,297...9,559,655
JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf365 zinc finger protein 365 involved_in ISO (MGI:5559035|PMID:23912123) UniProt PMID:23912123 MGI:5559035 NCBI chrNW_004955425:15,652,373...15,675,255
Ensembl chrNW_004955425:15,652,373...15,675,336
JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004955481:1,705,595...1,748,363
Ensembl chrNW_004955481:1,705,520...1,734,859
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (PMID:19074029) MGI PMID:19074029 NCBI chrNW_004955442:19,358,202...19,388,552
Ensembl chrNW_004955442:19,358,081...19,388,815
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chrNW_004955580:548,442...561,580
Ensembl chrNW_004955580:549,368...561,486
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004955431:23,538,224...23,540,039
Ensembl chrNW_004955431:23,538,242...23,539,051
JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chrNW_004955468:172,331...199,230
Ensembl chrNW_004955468:172,352...199,230
JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chrNW_004955482:8,101,410...8,187,815
Ensembl chrNW_004955482:8,101,917...8,216,219
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163)
(PMID:10630211)
(PMID:7834360)
MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:20153830) MGI PMID:20153830 NCBI chrNW_004955476:11,339,586...11,341,996
Ensembl chrNW_004955476:11,339,586...11,341,996
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004955547:467,331...501,172
Ensembl chrNW_004955547:466,777...501,490
JBrowse link
G Foxp2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chrNW_004955432:20,205,369...20,589,608
Ensembl chrNW_004955432:20,334,237...20,589,352
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO (PMID:20041218) MGI PMID:20041218 NCBI chrNW_004955450:11,525,245...11,719,992
Ensembl chrNW_004955450:11,525,246...11,719,992
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004955485:8,229,517...8,242,003
Ensembl chrNW_004955485:8,229,517...8,241,142
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004955482:9,682,671...9,691,155
Ensembl chrNW_004955482:9,682,526...9,691,530
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within ISO (PMID:8996814) MGI PMID:8996814 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600)
(PMID:24491816)
MGI PMID:21937600 PMID:24491816 NCBI chrNW_004955402:32,577,189...32,618,611
Ensembl chrNW_004955402:32,582,575...32,618,436
JBrowse link
G Slc25a46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chrNW_004955418:4,316,790...4,342,748
Ensembl chrNW_004955418:4,316,790...4,341,973
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO (PMID:29615573) MGI PMID:29615573 NCBI chrNW_004955449:8,242,327...8,306,012
Ensembl chrNW_004955449:8,241,990...8,308,562
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO (PMID:30420556) MGI PMID:30420556 NCBI chrNW_004955413:28,234,964...28,250,899
Ensembl chrNW_004955413:28,234,486...28,250,688
JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO (PMID:16906134) MGI PMID:16906134 NCBI chrNW_004955484:3,090,678...3,115,224
Ensembl chrNW_004955484:3,089,235...3,115,230
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205)
(PMID:20577052)
MGI PMID:16625205 PMID:20577052 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO (PMID:19265195) MGI PMID:19265195 NCBI chrNW_004955537:3,506,836...3,516,436
Ensembl chrNW_004955537:3,505,596...3,516,436
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004955547:467,331...501,172
Ensembl chrNW_004955547:466,777...501,490
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chrNW_004955419:3,055,420...3,060,208
Ensembl chrNW_004955419:3,055,420...3,062,131
JBrowse link
G Klhl1 kelch like family member 1 acts_upstream_of_or_within ISO (PMID:17005861) MGI PMID:17005861 NCBI chrNW_004955404:36,304,862...36,696,901
Ensembl chrNW_004955404:36,304,326...36,697,236
JBrowse link
G LOC102006544 cytochrome b-c1 complex subunit 8 involved_in ISO (MGI:3662936|PMID:16901643) UniProt PMID:16901643 MGI:3662936 NCBI chrNW_004955408:4,240,072...4,241,342
Ensembl chrNW_004955408:4,240,072...4,241,342
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chrNW_004955467:8,298,514...8,427,459
Ensembl chrNW_004955467:8,298,527...8,427,459
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:17712420) MGI PMID:17712420 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062
JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chrNW_004955415:32,055,926...32,121,611
Ensembl chrNW_004955415:32,055,375...32,117,833
JBrowse link
G Sez6 seizure related 6 homolog acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chrNW_004955481:4,175,637...4,220,809
Ensembl chrNW_004955481:4,175,651...4,220,803
JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chrNW_004955455:816,129...992,776
Ensembl chrNW_004955455:927,521...989,502
JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chrNW_004955493:7,059,865...7,080,524
Ensembl chrNW_004955493:7,059,865...7,081,038
JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Whrn whirlin involved_in ISO (MGI:5516521|PMID:24011083) CACAO PMID:24011083 MGI:5516521 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266
JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 acts_upstream_of_or_within ISO (PMID:20502676) MGI PMID:20502676 NCBI chrNW_004955412:19,718,534...19,750,340
Ensembl chrNW_004955412:19,718,132...19,753,361
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO (PMID:24466353) MGI PMID:24466353 NCBI chrNW_004955486:4,303,573...4,695,800
Ensembl chrNW_004955486:4,443,723...4,695,800
JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chrNW_004955491:1,983,002...3,982,510
Ensembl chrNW_004955491:1,984,050...3,981,830
JBrowse link
G Coq8b coenzyme Q8B involved_in ISO (PMID:27499294) UniProt PMID:27499294 NCBI chrNW_004955578:615,820...635,488
Ensembl chrNW_004955578:615,381...635,488
JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 acts_upstream_of_or_within ISO (PMID:20231455) MGI PMID:20231455 NCBI chrNW_004955422:18,659,489...18,699,338
Ensembl chrNW_004955422:18,659,489...18,699,338
JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5504540|PMID:23688253) UniProt PMID:23688253 MGI:5504540 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) UniProt PMID:23308235 MGI:5485315 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chrNW_004955482:9,682,671...9,691,155
Ensembl chrNW_004955482:9,682,526...9,691,530
JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chrNW_004955442:9,422,849...9,516,054
Ensembl chrNW_004955442:9,422,849...9,516,103
JBrowse link
G Acvr1c activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chrNW_004955449:15,814,230...15,864,747
Ensembl chrNW_004955449:15,813,856...15,858,537
JBrowse link
G Aif1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chrNW_004955437:157,509...158,919
Ensembl chrNW_004955437:157,509...158,919
JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chrNW_004955434:8,998,357...9,010,468
Ensembl chrNW_004955434:9,000,158...9,011,250
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chrNW_004955500:6,134,736...6,138,075
Ensembl chrNW_004955500:6,134,736...6,138,075
JBrowse link
G Arhgap32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chrNW_004955412:29,910,395...30,113,959
Ensembl chrNW_004955412:29,910,395...30,203,340
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chrNW_004955457:704,213...729,702
Ensembl chrNW_004955457:704,213...730,134
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:16880690) MGI PMID:16880690 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Atrn attractin acts_upstream_of_or_within ISO (PMID:18064672) MGI PMID:18064672 NCBI chrNW_004955415:14,341,635...14,505,955
Ensembl chrNW_004955415:14,340,403...14,506,024
JBrowse link
G Cd3e CD3e molecule involved_in ISO (MGI:3718938|PMID:17502348) ARUK-UCL PMID:17502348 MGI:3718938 NCBI chrNW_004955412:19,464,666...19,476,425
Ensembl chrNW_004955412:19,464,613...19,478,990
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:11226314) MGI PMID:11226314 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280
JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO (PMID:11517264)
(PMID:11226314)
MGI PMID:11226314 PMID:11517264 NCBI chrNW_004955481:7,408,089...7,411,813
Ensembl chrNW_004955481:7,408,205...7,409,128
JBrowse link
G Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chrNW_004955453:14,471,625...14,474,082
Ensembl chrNW_004955453:14,472,757...14,473,896
JBrowse link
G Ckb creatine kinase B ISO RGD PMID:12093362 RGD:625711 NCBI chrNW_004955538:2,379,868...2,380,771 JBrowse link
G Cntn1 contactin 1 acts_upstream_of_or_within ISO (PMID:18354028) MGI PMID:18354028 NCBI chrNW_004955500:154,704...540,546
Ensembl chrNW_004955500:245,896...540,600
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chrNW_004955491:1,983,002...3,982,510
Ensembl chrNW_004955491:1,984,050...3,981,830
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (PMID:25877302) MGI PMID:25877302 NCBI chrNW_004955426:21,867,876...21,991,889
Ensembl chrNW_004955426:21,868,017...21,983,747
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chrNW_004955410:31,830,333...31,874,384
Ensembl chrNW_004955410:31,828,506...31,875,100
JBrowse link
G En1 engrailed homeobox 1 involved_in ISO (MGI:82938|PMID:8848044) ParkinsonsUK-UCL PMID:8848044 MGI:82938 NCBI chrNW_004955459:10,839,581...10,844,198 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:16542644 RGD:1601098 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISO (MGI:5295128|PMID:21957071) UniProt PMID:21957071 MGI:5295128 NCBI chrNW_004955547:467,331...501,172
Ensembl chrNW_004955547:466,777...501,490
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (MGI:3718938|PMID:17502348) ARUK-UCL PMID:17502348 MGI:3718938 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:15983371)
(PMID:17619227)
MGI PMID:15983371 PMID:17619227 NC