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ONTOLOGY REPORT - ANNOTATIONS

Term:central nervous system development
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Accession:GO:0007417 term browser browse the term
Definition:The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
Synonyms:exact_synonym: CNS development
 xref: Wikipedia:Neural_development


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central nervous system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:67,492,494...67,563,265
Ensembl chr15:86,733,853...86,771,420 		JBrowse link
G ADGRA2 adhesion G protein-coupled receptor A2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:37,098,486...37,144,437
Ensembl chr 8:34,276,267...34,321,836 		JBrowse link
G ALDH3A2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:31,455,386...31,482,985
Ensembl chr17:36,599,835...36,628,102 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in IEA
ISS 		Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151 		JBrowse link
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:130,091,476...130,123,533
Ensembl chr12:134,805,830...134,835,140 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:32,786,362...32,797,728
Ensembl chr19:41,534,569...41,545,906 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:124,881,191...124,944,472
Ensembl chr11:128,775,329...128,847,482 		JBrowse link
G APP amyloid beta precursor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:11318878) UniProt PMID:11318878 NCBI chr15:59,376,993...59,573,925 JBrowse link
G B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:180,283,491...180,307,583
Ensembl chr 3:188,474,226...188,475,362 		JBrowse link
G BCAN brevican involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:131,985,310...132,003,068
Ensembl chr 1:135,808,783...135,826,344 		JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) MGI PMID:30735131 NCBI chr11:58,046,842...58,064,219
Ensembl chr11:61,399,314...61,416,494 		JBrowse link
G CAPG capping actin protein, gelsolin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:85,447,296...85,466,677
Ensembl chr2A:86,997,891...87,016,263 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186 		JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:10688202) MGI PMID:10688202 NCBI chr 3:181,417,140...181,460,236
Ensembl chr 3:189,898,856...189,908,573 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (PMID:11823447) MGI PMID:11823447 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:14,618,294...14,635,193
Ensembl chr17:14,842,577...14,858,896 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in ISO (PMID:9119111) UniProt PMID:9119111 NCBI chr12:40,726,137...40,757,690 JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chr10:89,817,623...89,822,024
Ensembl chr10:93,330,460...93,334,105 		JBrowse link
G CYP26C1 cytochrome P450 family 26 subfamily C member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:89,804,830...89,813,687
Ensembl chr10:93,317,798...93,325,315 		JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935 		JBrowse link
G DCLK2 doublecortin like kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:142,412,945...142,590,129
Ensembl chr 4:154,064,018...154,239,156 		JBrowse link
G DCX doublecortin involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G DHX30 DExH-box helicase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:47,715,275...47,762,872
Ensembl chr 3:48,819,125...48,857,964 		JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:45,792,574...45,818,915
Ensembl chr 1:47,165,667...47,171,140 		JBrowse link
G DNER delta/notch like EGF repeat containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:116,604,193...116,963,026
Ensembl chr2B:235,409,108...235,642,161 		JBrowse link
G DRP2 dystrophin related protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:90,422,483...90,467,610
Ensembl chr  X:100,558,208...100,603,233 		JBrowse link
G ECRG4 ECRG4 augurin precursor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:95,762,149...95,774,834
Ensembl chr2A:107,140,895...107,152,967 		JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr14:55,554,516...55,561,201
Ensembl chr14:74,399,056...74,405,770 		JBrowse link
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:44,154,600...44,290,407
Ensembl chr 1:45,525,137...45,650,259 		JBrowse link
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta involved_in IEA UniProt GO_REF:0000117 NCBI chr2A:27,368,189...27,374,265
Ensembl chr2A:27,456,457...27,462,706 		JBrowse link
G ELP3 elongator acetyltransferase complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:27,370,360...27,470,169
Ensembl chr 8:24,570,410...24,669,941 		JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G FKRP fukutin related protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:43,738,339...43,748,250
Ensembl chr19:52,273,546...52,276,341 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 acts_upstream_of_or_within ISO (PMID:12700164) MGI PMID:12700164 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:75,163,796...75,240,049
Ensembl chr 4:85,894,401...85,960,783 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:18346921) MGI PMID:18346921 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:35,587,876...35,599,971
Ensembl chr 9:36,390,409...36,402,949 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:23,519,911...23,558,105
Ensembl chr 1:24,502,294...24,547,152 		JBrowse link
G GSN gelsolin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G HAPLN1 hyaluronan and proteoglycan link protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:31,560,282...31,643,138
Ensembl chr 5:31,879,276...31,964,562 		JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:131,962,801...131,969,331
Ensembl chr 1:135,785,754...135,792,652 		JBrowse link
G HAPLN3 hyaluronan and proteoglycan link protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:67,565,957...67,584,352
Ensembl chr15:86,773,882...86,792,120 		JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:18,694,303...18,701,553
Ensembl chr19:19,699,817...19,703,735 		JBrowse link
G HELT helt bHLH transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:177,183,619...177,186,099
Ensembl chr 4:189,405,042...189,406,886 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:9398841) MGI PMID:9398841 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G ID3 inhibitor of DNA binding 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,748,714...22,750,582
Ensembl chr 1:23,734,263...23,736,175 		JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G LOC100986707 cytochrome c oxidase subunit 7B, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:67,082,551...67,088,492
Ensembl chr  X:77,194,757...77,200,532 		JBrowse link
G MARCKSL1 MARCKS like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:31,620,171...31,622,577
Ensembl chr 1:32,627,376...32,628,463 		JBrowse link
G MSI1 musashi RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:117,915,879...117,943,772
Ensembl chr12:121,289,281...121,316,276 		JBrowse link
G MSI2 musashi RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:51,335,550...51,763,572
Ensembl chr17:56,194,360...56,613,698 		JBrowse link
G NCAN neurocan involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:18,650,522...18,690,882
Ensembl chr19:19,657,766...19,691,998 		JBrowse link
G NDN necdin, MAGE family member acts_upstream_of_or_within ISO (PMID:15649943) MGI PMID:15649943 NCBI chr15:5,977,519...5,979,185 JBrowse link
G NGFR nerve growth factor receptor acts_upstream_of_or_within ISO (PMID:11978834) MGI PMID:11978834 NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966 		JBrowse link
G NHLH1 nescient helix-loop-helix 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:135,721,367...135,727,206
Ensembl chr 1:139,645,680...139,646,081 		JBrowse link
G NHLH2 nescient helix-loop-helix 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:86,719,650...86,727,607
Ensembl chr 1:121,774,940...121,775,347 		JBrowse link
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G NOTO notochord homeobox involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:73,254,440...73,265,315
Ensembl chr2A:74,744,181...74,752,950 		JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,129,389...100,442,910
Ensembl chr 7:112,849,811...112,942,413 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11731459)
(PMID:12652306) 		MGI PMID:11731459 PMID:12652306 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:1723950) UniProt PMID:1723950 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028 		JBrowse link
G PAX6 paired box 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:3,030,885...3,062,642
Ensembl chr19:3,982,555...4,015,167 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G PROX2 prospero homeobox 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:55,405,491...55,416,807
Ensembl chr14:74,252,489...74,261,224 		JBrowse link
G PTEN phosphatase and tensin homolog acts_upstream_of_or_within ISO (PMID:12091320) MGI PMID:12091320 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:113,882,557...114,073,283
Ensembl chr 7:126,569,630...126,758,155 		JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SCIN scinderin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:13,269,361...13,351,854
Ensembl chr 7:12,613,996...12,696,244 		JBrowse link
G SEMA6B semaphorin 6B involved_in ISO (PMID:32169168) UniProt PMID:32169168 NCBI chr19:3,562,673...3,600,981 JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in IEA UniProt GO_REF:0000117 NCBI chr19:3,383,267...3,423,165
Ensembl chr19:4,329,750...4,340,121 		JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:17,386,298...17,605,722
Ensembl chr 9:18,045,198...18,097,579 		JBrowse link
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in IEA UniProt GO_REF:0000117 NCBI chr15:61,988,584...62,153,543
Ensembl chr15:81,337,529...81,501,770 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within 		IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:42,224,273...42,257,184
Ensembl chr 1:43,600,733...43,634,143 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:12435628) MGI
TreeGrafter		 PMID:12435628 GO_REF:0000118 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISO (PMID:9119111) UniProt PMID:9119111 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:54,608,711...54,816,083
Ensembl chr2A:55,822,415...55,961,925 		JBrowse link
G STK3 serine/threonine kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:95,098,185...95,465,324
Ensembl chr 8:97,355,173...97,708,437 		JBrowse link
G STK4 serine/threonine kinase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:41,297,157...41,410,487
Ensembl chr20:42,389,615...42,503,014 		JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:42,691,292...42,754,046
Ensembl chr 1:44,068,998...44,129,456 		JBrowse link
G THOC6 THO complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,965,875...1,969,595
Ensembl chr16:3,138,229...3,141,876 		JBrowse link
G TLX1 T cell leukemia homeobox 1 acts_upstream_of_or_within ISO (PMID:12023301) MGI PMID:12023301 NCBI chr10:97,731,715...97,738,978
Ensembl chr10:101,207,374...101,214,625 		JBrowse link
G TLX3 T cell leukemia homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:166,658,166...166,661,098
Ensembl chr 5:173,411,881...173,414,106 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (PMID:16702401) MGI PMID:16702401 NCBI chr 1:199,403,194...199,469,079
Ensembl chr 1:204,414,218...204,457,739 		JBrowse link
G TPP1 tripeptidyl peptidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:6,744,815...6,751,556
Ensembl chr11:6,427,522...6,434,222 		JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10601035)
(PMID:10601036) 		MGI
TreeGrafter		 PMID:10601035 PMID:10601036 GO_REF:0000118 NCBI chr10:113,710,934...113,720,671 JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:70,964,829...70,997,702
Ensembl chr2A:72,078,829...72,111,463 		JBrowse link
G VCAN versican involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:31,699,278...31,810,169
Ensembl chr 5:32,019,709...32,130,351 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,659,443...96,525,316
Ensembl chr 8:97,860,720...98,698,271 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:108,938,414...109,133,819
Ensembl chr11:112,780,380...112,977,164 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
G ZIC1 Zic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:144,437,075...144,443,516
Ensembl chr 3:152,019,013...152,024,502 		JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:11756505) MGI PMID:11756505 NCBI chr13:81,151,669...81,156,648 JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935 		JBrowse link
G GHRH growth hormone releasing hormone acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:33,573,001...33,583,699
Ensembl chr20:34,687,587...34,693,240 		JBrowse link
G GHRHR growth hormone releasing hormone receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:31,582,134...31,592,914
Ensembl chr 7:31,696,914...31,712,200 		JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:9,082,674...9,085,014
Ensembl chr13:27,427,569...27,428,876 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G POU1F1 POU class 1 homeobox 1 ISO RGD PMID:16216912 RGD:1601440 NCBI chr 3:87,390,157...87,407,611
Ensembl chr 3:89,501,298...89,521,168 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) MGI PMID:18996108 NCBI chr 5:173,086,726...173,090,461 JBrowse link
G SLC6A3 solute carrier family 6 member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 5:1,437,567...1,488,829 JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16932809) RGD
MGI		 PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUOX2 dual oxidase 2 acts_upstream_of_or_within ISO (PMID:17440044) MGI PMID:17440044 NCBI chr15:24,040,513...24,061,758
Ensembl chr15:42,395,135...42,414,281 		JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARHL2 BarH like homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:93,373,317...93,378,667
Ensembl chr 1:92,121,017...92,126,036 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chr 8:61,119,561...61,122,827 JBrowse link
G FAT3 FAT atypical cadherin 3 acts_upstream_of_or_within ISO (PMID:21903076) MGI PMID:21903076 NCBI chr11:87,242,937...87,921,955 JBrowse link
G FOXN4 forkhead box N4 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:15363391) Ensembl
UniProt		 PMID:15363391 GO_REF:0000107 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025 		JBrowse link
G GDF11 growth differentiation factor 11 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:33,154,530...33,168,427
Ensembl chr12:33,879,180...33,893,252 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:11861467) UniProt PMID:11861467 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in ISO (PMID:11861467) UniProt PMID:11861467 NCBI chr12:33,719,986...33,730,012 JBrowse link
G PTF1A pancreas associated transcription factor 1a acts_upstream_of_or_within
involved_in 		ISO (PMID:17301087)
(PMID:17075007) 		MGI
UniProt		 PMID:17075007 PMID:17301087 NCBI chr10:23,356,165...23,359,579 JBrowse link
G RORB RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of ISO (PMID:18973577) MGI PMID:18973577 NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:32,906,641...32,927,119
Ensembl chr20:34,028,415...34,046,354 		JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:52,515,534...52,600,390
Ensembl chr 1:54,114,909...54,199,452 		JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:135,469,495...135,497,303
Ensembl chr 1:139,390,549...139,418,303 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:22791648 RGD:8694158 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G MME membrane metalloendopeptidase acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605 NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:25242307) MGI PMID:25242307 NCBI chr11:72,372,577...72,524,817
Ensembl chr11:76,015,998...76,104,197 		JBrowse link
G TBR1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:24441682) MGI PMID:24441682 NCBI chr2B:48,709,687...48,719,382 JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 8:61,119,561...61,122,827 JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,453,708...10,488,391
Ensembl chr 1:11,670,651...11,700,012 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:193,913,712...193,934,123
Ensembl chr 3:203,856,374...203,876,537 		JBrowse link
G NFIB nuclear factor I B involved_in ISO (PMID:19961580) UniProt PMID:19961580 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G PLXNA4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chr 7:124,097,028...124,621,504
Ensembl chr 7:136,643,657...136,992,405 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:23206892) Ensembl
UniProt		 PMID:23206892 GO_REF:0000107 NCBI chr11:71,833,654...71,848,509
Ensembl chr11:75,492,912...75,493,973 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,347,559...111,419,866
Ensembl chr 1:110,512,347...110,584,155 		JBrowse link
astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO RGD PMID:12838511 RGD:1625689 NCBI chr22:5,233,876...5,248,622
Ensembl chr22:22,104,253...22,114,189 		JBrowse link
G AGER advanced glycosylation end-product specific receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641 		JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G BACE2 beta-secretase 2 ISO RGD PMID:21073551 RGD:13782176 NCBI chr21:27,500,453...27,612,795
Ensembl chr21:40,831,203...40,938,280 		JBrowse link
G C5AR1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:44,293,612...44,310,430
Ensembl chr19:52,950,317...52,966,146 		JBrowse link
G CNTF ciliary neurotrophic factor involved_in ISO
IEA 		spinal cord astrocytes RGD
TreeGrafter		 PMID:11771938 GO_REF:0000118 RGD:1626172 NCBI chr11:53,876,081...53,882,870
Ensembl chr11:57,336,792...57,341,121 		JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:16837601 RGD:1581900 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615 		JBrowse link
G FPR2 formyl peptide receptor 2 involved_in ISO PMID:18723082 ARUK-UCL PMID:18723082 RGD:12910993 NCBI chr19:48,663,622...48,715,535 JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829 		JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:134,958,270...134,980,560
Ensembl chr 6:139,045,821...139,068,053 		JBrowse link
G IL1B interleukin 1 beta acts_upstream_of_or_within ISO (PMID:28377412) MGI PMID:28377412 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G LOC100986475 metallothionein-2 ISO RGD PMID:19837066 RGD:6483825 NCBI chr16:36,894,853...36,895,826
Ensembl chr16:56,007,922...56,028,093 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34852714 RGD:155882542 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
astrocyte activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G GRN granulin precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609 		JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chr12:31,713,938...31,799,287
Ensembl chr12:31,966,149...32,051,979 		JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,170,806...181,180,923
Ensembl chr 3:189,652,554...189,665,528 		JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:12,407,211...12,417,072
Ensembl chr17:12,579,754...12,591,961 		JBrowse link
G LAMB2 laminin subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:49,045,419...49,057,340
Ensembl chr 3:50,125,460...50,137,074 		JBrowse link
G LAMC3 laminin subunit gamma 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:102,131,594...102,213,829
Ensembl chr 9:130,777,182...130,861,292 		JBrowse link
G PLP1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:24038504) MGI PMID:24038504 NCBI chr  X:93,015,098...93,031,193
Ensembl chr  X:103,353,184...103,412,513 		JBrowse link
G ROR1 receptor tyrosine kinase like orphan receptor 1 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 1:63,030,097...63,437,919
Ensembl chr 1:64,839,061...65,324,036 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:15095375 RGD:11537371 NCBI chr 9:62,782,183...63,005,626
Ensembl chr 9:90,851,983...90,965,084 		JBrowse link
G S100A8 S100 calcium binding protein A8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:128,741,378...128,742,520
Ensembl chr 1:132,370,435...132,371,591 		JBrowse link
G S100A9 S100 calcium binding protein A9 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:22577135) MGI
TreeGrafter		 PMID:22577135 GO_REF:0000118 NCBI chr 1:128,709,175...128,712,461
Ensembl chr 1:132,338,246...132,341,497 		JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711 		JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:87,472,017...87,511,719
Ensembl chr 1:122,520,308...122,561,850 		JBrowse link
G VIM vimentin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642 		JBrowse link
astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ISO RGD PMID:17141959 RGD:2303044
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:109,798,279...109,870,469
Ensembl chr  X:119,985,116...120,034,702 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,170,806...181,180,923
Ensembl chr 3:189,652,554...189,665,528 		JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G GAP43 growth associated protein 43 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:112,765,576...112,863,118
Ensembl chr 3:119,734,942...119,780,290 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15156153) UniProt PMID:15156153 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:12917623 RGD:2301689 NCBI chr11:113,923,004...113,931,732
Ensembl chr11:117,852,295...117,860,757 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr12:22,954,946...23,096,623 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:19109490) MGI PMID:19109490 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr22:14,077,463...14,929,250 JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:17328769 RGD:2326156 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:120,087,477...120,137,550
Ensembl chr 4:131,391,361...131,439,590 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of ISO (PMID:18640244) MGI PMID:18640244 NCBI chr2A:15,925,130...15,931,605 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within
involved_in 		ISO (PMID:21800304)
(PMID:29106906) 		MGI PMID:21800304 PMID:29106906 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:19378247 RGD:2325301 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:30186101) RGD
MGI
Ensembl		 PMID:22944581 PMID:30186101 GO_REF:0000107 RGD:8552357 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:19147496 RGD:5508832 NCBI chr21:33,063,845...33,070,073
Ensembl chr21:46,197,750...46,203,953 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SOX6 SRY-box transcription factor 6 ISO RGD PMID:15846364 RGD:1581115 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:15590934) MGI PMID:15590934 NCBI chr10:113,710,934...113,720,671 JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:63,959,930...64,087,102
Ensembl chr2A:65,086,374...65,176,634 		JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCM1 glial cells missing transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:52,681,528...52,703,367
Ensembl chr 6:54,319,744...54,341,582 		JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:46,524,484...46,540,595
Ensembl chr 1:48,042,594...48,048,622 		JBrowse link
Bergmann glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 1:154,586,423...154,711,621
Ensembl chr 1:158,280,994...158,313,915 		JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:12,407,211...12,417,072
Ensembl chr17:12,579,754...12,591,961 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:177,720,832...177,731,551
Ensembl chr 1:182,022,600...182,028,623 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G PLPP3 phospholipid phosphatase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:55,779,343...55,862,717
Ensembl chr 1:57,489,178...57,573,398 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G VIM vimentin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642 		JBrowse link
brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AATK apoptosis associated tyrosine kinase acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:22573681) MGI
TreeGrafter		 PMID:22573681 GO_REF:0000118 NCBI chr17:75,542,565...75,591,208
Ensembl chr17:81,270,707...81,319,789 		JBrowse link
G ABCB6 ATP binding cassette subfamily B member 6 (LAN blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,467,345...106,476,614
Ensembl chr2B:225,058,771...225,067,626 		JBrowse link
G ABR ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658 NCBI chr17:972,009...1,174,953
Ensembl chr17:895,013...1,069,973 		JBrowse link
G ACHE acetylcholinesterase (Yt blood group) ISO RGD PMID:20147288 RGD:405855864 NCBI chr 7:92,915,065...92,922,079
Ensembl chr 7:106,311,944...106,318,184 		JBrowse link
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:37,896,177...37,942,040
Ensembl chr16:57,036,425...57,074,221 		JBrowse link
G AFG2A AAA ATPase AFG2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:115,101,064...115,489,360
Ensembl chr 4:126,256,152...126,631,500 		JBrowse link
G AIM2 absent in melanoma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,413,232...134,540,344
Ensembl chr 1:138,210,946...138,221,753 		JBrowse link
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:21746835)
(PMID:18776131) 		MGI PMID:18776131 PMID:21746835 NCBI chr14:77,021,880...77,119,037
Ensembl chr14:96,344,240...96,440,384 		JBrowse link
G ALK ALK receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:29,196,195...29,930,062
Ensembl chr2A:29,276,041...30,006,735 		JBrowse link
G AMIGO1 adhesion molecule with Ig like domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:111,881,753...111,887,308
Ensembl chr 1:111,113,632...111,115,113 		JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:41,652,954...41,656,393
Ensembl chr12:42,525,858...42,527,426 		JBrowse link
G AMIGO3 adhesion molecule with Ig like domain 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:49,648,967...49,652,285
Ensembl chr 3:50,885,925...50,887,439 		JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:107,946,756...107,977,489
Ensembl chr12:111,338,045...111,368,466 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:96,224,515...96,311,246
Ensembl chr12:99,637,622...99,726,939 		JBrowse link
G APOD apolipoprotein D involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:192,852,887...192,868,233
Ensembl chr 3:203,152,476...203,168,060 		JBrowse link
G ARL6 ARF like GTPase 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:94,832,577...94,870,531
Ensembl chr 3:101,519,718...101,556,419 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:24022475) UniProt PMID:24022475 NCBI chr15:59,376,993...59,573,925 JBrowse link
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:172,674,890...172,737,426
Ensembl chr 1:176,988,297...177,050,810 		JBrowse link
G ATM ATM serine/threonine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832 		JBrowse link
G ATXN1 ataxin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:16,155,049...16,952,827
Ensembl chr 6:16,526,563...16,548,566 		JBrowse link
G ATXN1L ataxin 1 like involved_in ISO (PMID:28288114) UniProt PMID:28288114 NCBI chr16:53,153,416...53,165,311 JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:12,475,095...12,601,818
Ensembl chr13:30,927,270...31,035,719 		JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:43,281,011...43,292,992
Ensembl chr 1:44,652,906...44,664,401 		JBrowse link
G BAG6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,300,126...31,313,829
Ensembl chr 6:32,190,037...32,204,321 		JBrowse link
G BBS7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:114,024,949...114,072,000
Ensembl chr 4:125,161,804...125,208,350 		JBrowse link
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11684658) MGI PMID:11684658
G BGLAP bone gamma-carboxyglutamate protein involved_in
acts_upstream_of_or_within 		ISO (PMID:24074871)
(PMID:28851741) 		UniProt PMID:24074871 PMID:28851741 NCBI chr 1:131,583,789...131,586,459
Ensembl chr 1:135,413,871...135,416,432 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:22,477,755...22,487,894
Ensembl chr10:22,857,776...22,863,479 		JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,759,241...61,917,343
Ensembl chr17:66,956,594...67,109,428 		JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:90,296,199...90,499,503
Ensembl chr 9:118,646,433...118,792,727 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:69,085,434...69,244,791 JBrowse link
G CCDC141 coiled-coil domain containing 141 involved_in ISO (PMID:34298015) UniProt PMID:34298015 NCBI chr2B:66,086,654...66,307,309 JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:177,640,127...177,705,885
Ensembl chr 3:185,813,245...185,878,362 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:91,519,179...91,707,469
Ensembl chr 9:119,868,015...120,055,608 		JBrowse link
G CERS1 ceramide synthase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:18,308,265...18,334,892
Ensembl chr19:19,317,173...19,342,487 		JBrowse link
G CFAP43 cilia and flagella associated protein 43 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:100,729,982...100,831,694
Ensembl chr10:104,188,653...104,290,557 		JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within 		IEA Ensembl GO_REF:0000107 NCBI chr14:2,202,847...2,274,012
Ensembl chr14:20,281,422...20,326,361 		JBrowse link
G CHL1 cell adhesion molecule L1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:146,514...354,334
Ensembl chr 3:262,717...469,715 		JBrowse link
G CIC capicua transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:39,156,204...39,183,498
Ensembl chr19:47,751,520...47,774,699 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,537,949...61,543,545
Ensembl chr  X:71,621,785...71,625,702 		JBrowse link
G CLN5 CLN5 lysosomal BMP synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,207,542...58,220,697
Ensembl chr13:77,253,203...77,263,759 		JBrowse link
G CNTN1 contactin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:47,630,295...48,014,766
Ensembl chr12:48,492,564...48,670,126 		JBrowse link
G CNTN2 contactin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:180,645,259...180,680,081
Ensembl chr 1:184,931,497...184,966,482 		JBrowse link
G CNTN3 contactin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:74,203,074...74,555,980
Ensembl chr 3:76,126,857...76,384,431 		JBrowse link
G CNTN5 contactin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:94,012,914...95,340,930
Ensembl chr11:98,062,341...98,848,900 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:91,282,617...91,440,187
Ensembl chr13:110,407,009...110,562,529 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:3,686,903...3,711,857
Ensembl chr17:3,683,575...3,708,253 		JBrowse link
G CWH43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:73,092,093...73,168,001
Ensembl chr 4:83,820,733...83,896,296 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) MGI PMID:12183377 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:12183377) MGI
TreeGrafter		 PMID:12183377 GO_REF:0000118 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISO PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr10:68,796,712...68,798,840
Ensembl chr10:71,264,029...71,266,149 		JBrowse link
G DHX37 DEAH-box helicase 37 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:122,539,236...122,582,819
Ensembl chr12:126,823,006...126,865,933 		JBrowse link
G DIAPH1 diaphanous related formin 1 involved_in ISO (PMID:24781755) UniProt PMID:24781755 NCBI chr 5:136,876,396...136,980,097 JBrowse link
G DMBX1 diencephalon/mesencephalon homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:45,792,574...45,818,915
Ensembl chr 1:47,165,667...47,171,140 		JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr15:30,386,009...30,557,976
Ensembl chr15:48,719,150...48,890,708 		JBrowse link
G DNAAF3 dynein axonemal assembly factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:52,199,690...52,208,648
Ensembl chr19:60,894,180...60,902,686 		JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,835,722...80,836,402 JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:112,263,509...112,632,332
Ensembl chr11:116,196,677...116,302,262 		JBrowse link
G EML1 EMAP like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,362,837...80,566,996
Ensembl chr14:99,793,812...99,885,359 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12561075)
(PMID:12091317) 		MGI PMID:12091317 PMID:12561075 NCBI chr2A:72,969,693...73,030,427 JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G EOMES eomesodermin involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA
ISO 		Ensembl
RGD		 PMID:7731712 GO_REF:0000107 RGD:70732 NCBI chr 6:91,143,240...91,322,040
Ensembl chr 6:94,392,353...94,566,716 		JBrowse link
G EPOR erythropoietin receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:10,925,148...10,931,955
Ensembl chr19:11,635,248...11,642,383 		JBrowse link
G ESR2 estrogen receptor 2 acts_upstream_of_or_within ISO (PMID:12515851) MGI PMID:12515851 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO
IEA 		(PMID:14605369) MGI
Ensembl		 PMID:14605369 GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G FKRP fukutin related protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:43,738,339...43,748,250
Ensembl chr19:52,273,546...52,276,341 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:76,723,071...76,821,611
Ensembl chr 9:104,849,496...104,925,422 		JBrowse link
G FLVCR2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chr14:56,132,370...56,209,882 JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:9635428)
(PMID:4784576), (PMID:5500588) 		MGI PMID:4784576 PMID:5500588 PMID:9635428 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:70,084,920...70,089,865
Ensembl chr17:75,638,634...75,641,666 		JBrowse link
G FOXR1 forkhead box R1 involved_in ISO (PMID:34723967) UniProt PMID:34723967 NCBI chr11:113,809,875...113,819,093
Ensembl chr11:117,740,678...117,750,262 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:3,129,481...3,357,495
Ensembl chr15:23,981,359...24,058,357 		JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr16:70,777,446...70,806,437
Ensembl chr16:90,444,141...90,467,849 		JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr17:27,185,025...27,201,146
Ensembl chr17:27,706,776...27,717,857 		JBrowse link
G GIT2 GIT ArfGAP 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:107,505,791...107,572,641
Ensembl chr12:110,901,303...110,967,489 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GPR158 G protein-coupled receptor 158 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:25,352,131...25,777,652
Ensembl chr10:25,722,127...26,140,997 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:98,129,147...98,308,120
Ensembl chr 8:100,308,575...100,471,830 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:42,555,131...42,785,228
Ensembl chr15:60,848,493...61,017,244 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:17331197) UniProt PMID:17331197 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347 		JBrowse link
G HMX2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:15363417) MGI PMID:15363417 NCBI chr10:119,700,416...119,708,444 JBrowse link
G HMX3 H6 family homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:119,693,787...119,697,408
Ensembl chr10:123,968,996...123,970,486 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:138,204,544...138,226,689 JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10579729) MGI
UniProt		 PMID:10579729 GO_REF:0000117 NCBI chr 1:21,014,951...21,129,937
Ensembl chr 1:21,979,504...22,053,400 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16978870) MGI PMID:16978870 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:53,785,727...54,210,088
Ensembl chr16:70,661,924...71,063,631 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:40,543,039...40,564,372
Ensembl chr18:43,903,315...43,924,901 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:27,448,139...27,492,302
Ensembl chr2A:27,536,534...27,580,406 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:22228099)
(PMID:19036983) 		MGI PMID:19036983 PMID:22228099 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G IGF1R insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974 		JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (PMID:21824519) MGI PMID:21824519 NCBI chr 7:102,647,212...103,536,293 JBrowse link
G INTS15 integrator complex subunit 15 acts_upstream_of_or_within ISO (PMID:36851842) MGI PMID:36851842 NCBI chr 7:6,835,964...6,854,628 JBrowse link
G IRS2 insulin receptor substrate 2 acts_upstream_of_or_within ISO (PMID:12904469) MGI PMID:12904469 NCBI chr13:90,886,095...90,917,724 JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:117,716,064...117,793,476
Ensembl chr11:121,639,251...121,712,928 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,027,333...5,037,136
Ensembl chr12:4,950,938...4,952,425 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) MGI PMID:30382937 Ensembl chr20:61,325,365...61,395,266 JBrowse link
G KDM4B lysine demethylase 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,986,296...4,172,359
Ensembl chr19:4,977,413...5,116,113 		JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr 1:176,569,305...176,623,403
Ensembl chr 1:180,872,306...180,925,725 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:29360985)
(PMID:26306834), (PMID:29360985) 		MGI PMID:26306834 PMID:29360985 NCBI chr22:14,077,463...14,929,250 JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796 		JBrowse link
G LOC100974647 core histone macro-H2A.2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:66,526,013...66,585,568
Ensembl chr10:69,077,456...69,114,194 		JBrowse link
G LOC100985156 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:38,424,713...38,447,193
Ensembl chr 1:142,001,162...142,022,865 		JBrowse link
G LOC100988353 septin-4 acts_upstream_of_or_within ISO (PMID:16314519) MGI PMID:16314519 NCBI chr17:52,595,185...52,607,020
Ensembl chr17:57,448,904...57,472,690 		JBrowse link
G LOC100989577 contactin-4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:2,037,293...2,998,793
Ensembl chr 3:2,616,432...3,101,786 		JBrowse link
G LOC100990608 contactin-6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:1,021,854...1,339,952
Ensembl chr 3:1,133,190...1,442,622 		JBrowse link
G MACO1 macoilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:24,701,352...24,771,038
Ensembl chr 1:25,771,175...25,839,635 		JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:13,966,338...16,020,506
Ensembl chr20:13,950,260...15,997,806 		JBrowse link
G MAGEE2 MAGE family member E2 acts_upstream_of_or_within ISO (PMID:34464968) MGI PMID:34464968 NCBI chr  X:65,030,659...65,033,059
Ensembl chr  X:75,142,500...75,144,068 		JBrowse link
G MAP1S microtubule associated protein 1S involved_in ISO (PMID:15528209) HGNC-UCL PMID:15528209 NCBI chr19:17,201,883...17,217,116
Ensembl chr19:18,178,445...18,192,873 		JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,395,531...12,436,646
Ensembl chr19:13,138,382...13,179,569 		JBrowse link
G MATCAP1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISO (PMID:35482892) UniProt PMID:35482892 NCBI chr16:47,521,391...47,529,602
Ensembl chr16:66,909,814...66,914,863 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MED1 mediator complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:12397180) MGI PMID:12397180 NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438 		JBrowse link
G MINK1 misshapen like kinase 1 involved_in ISO (PMID:10708748) UniProt PMID:10708748 NCBI chr17:4,879,851...4,944,374
Ensembl chr17:4,868,620...4,932,789 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
G NAPA NSF attachment protein alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:44,479,871...44,507,315
Ensembl chr19:53,135,166...53,162,757 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486) MGI PMID:12556486 NCBI chr20:31,044,339...31,154,798
Ensembl chr20:32,170,583...32,247,167 		JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:28916769) Ensembl
MGI		 PMID:28916769 GO_REF:0000107 NCBI chr 5:60,344,363...60,467,008
Ensembl chr 5:61,966,124...62,088,375 		JBrowse link
G NEGR1 neuronal growth regulator 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:70,628,093...71,503,114
Ensembl chr 1:72,613,516...73,484,240 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:10,648,022...10,738,167
Ensembl chr22:28,454,119...28,544,013 		JBrowse link
G NFASC neurofascin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:180,430,523...180,624,953
Ensembl chr 1:184,759,115...184,905,467 		JBrowse link
G NFIB nuclear factor I B involved_in ISO (PMID:30388402) UniProt PMID:30388402 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23964093)
(PMID:17353270) 		MGI PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:11971878)
(PMID:8557195)
(PMID:12930780) 		UniProt
MGI		 PMID:8557195 PMID:11971878 PMID:12930780
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:144,620,719...144,850,230
Ensembl chr 1:148,343,026...148,572,499 		JBrowse link
G NNAT neuronatin involved_in IEA InterPro GO_REF:0000002 NCBI chr20:33,842,071...33,845,575
Ensembl chr20:34,955,234...34,959,493 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:66,906,866...66,916,938
Ensembl chr10:69,433,959...69,443,972 		JBrowse link
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G NOTCH2 notch receptor 2 ISO RGD PMID:1295745 RGD:69906 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840 		JBrowse link
G NOTO notochord homeobox involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:73,254,440...73,265,315
Ensembl chr2A:74,744,181...74,752,950 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:10195193) MGI PMID:10195193 NCBI chr12:5,551,734...5,615,981
Ensembl chr12:5,530,508...5,533,989 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:10,967,913...10,982,032
Ensembl chr19:11,678,306...11,693,332 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within ISO
IEA 		(PMID:27486780) MGI
Ensembl		 PMID:27486780 GO_REF:0000107 NCBI chr17:15,349,353...15,385,293
Ensembl chr17:15,570,316...15,603,787 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PCDH18 protocadherin 18 involved_in ISO (PMID:11716507) UniProt PMID:11716507 NCBI chr 4:129,869,955...129,882,777
Ensembl chr 4:141,188,849...141,203,382 		JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,503,884...30,537,082
Ensembl chr22:49,502,489...49,517,613 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:45,494,834...45,525,804
Ensembl chr 1:46,849,528...46,859,137 		JBrowse link
G POMK protein O-mannose kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:42,340,500...42,371,426
Ensembl chr 8:39,790,758...39,811,239 		JBrowse link
G POU3F4 POU class 3 homeobox 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:72,563,887...72,568,233
Ensembl chr  X:82,666,757...82,667,842 		JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:39,358,424...39,383,087
Ensembl chr 1:40,683,841...40,708,609 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762 		JBrowse link
G PYGO2 pygopus family PHD finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:130,305,547...130,310,270
Ensembl chr 1:133,912,411...133,920,308 		JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 involved_in ISO (PMID:24656866) UniProt PMID:24656866 NCBI chr 3:49,020,310...49,029,443
Ensembl chr 3:50,100,216...50,125,112 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:24,692,363...24,810,685
Ensembl chr2B:139,125,375...139,242,721 		JBrowse link
G RAX retina and anterior neural fold homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:52,664,243...52,669,177
Ensembl chr18:55,990,984...55,995,469 		JBrowse link
G RELN reelin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:76,013,780...77,764,156
Ensembl chr 3:79,030,223...79,632,309 		JBrowse link
G ROBO3 roundabout guidance receptor 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr11:119,692,232...119,708,309
Ensembl chr11:123,607,268...123,623,356 		JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr16:3,721,063...3,727,056
Ensembl chr16:4,887,051...4,892,607 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G RTN1 reticulon 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:40,198,279...40,472,255 JBrowse link
G RTN2 reticulon 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:42,434,085...42,446,862
Ensembl chr19:51,030,708...51,043,404 		JBrowse link
G RTN3 reticulon 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:59,039,313...59,117,572
Ensembl chr11:62,391,284...62,468,595 		JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:103,893,199...103,898,381
Ensembl chr 1:102,608,839...102,609,987 		JBrowse link
G SCYL2 SCY1 like pseudokinase 2 involved_in ISO (PMID:26203146) UniProt PMID:26203146 NCBI chr12:97,848,852...97,920,561
Ensembl chr12:101,255,412...101,326,808 		JBrowse link
G SELENOP selenoprotein P acts_upstream_of_or_within ISO (PMID:14704310) MGI PMID:14704310 NCBI chr 5:67,570,087...67,582,192
Ensembl chr 5:72,619,607...72,627,213 		JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,984,260...24,019,579 JBrowse link
G SHROOM4 shroom family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,673,968...42,974,947
Ensembl chr  X:50,464,824...50,687,221 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12569128) MGI PMID:12569128 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,323,124...4,420,193
Ensembl chr 9:4,511,491...4,608,337 		JBrowse link
G SLC23A1 solute carrier family 23 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:134,737,344...134,756,153
Ensembl chr 5:140,859,984...140,877,214 		JBrowse link
G SLC6A17 solute carrier family 6 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,801,302...112,852,916
Ensembl chr 1:127,488,569...127,540,695 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17035536) MGI PMID:17035536 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849 		JBrowse link
G SMARCA1 SNF2 related chromatin remodeling ATPase 1 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:14609955) HGNC-UCL
Ensembl		 PMID:14609955 GO_REF:0000107 NCBI chr  X:118,577,295...118,654,326
Ensembl chr  X:128,875,334...128,952,900 		JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:40,679,952...40,704,104
Ensembl chr19:49,285,796...49,309,980 		JBrowse link
G SOX14 SRY-box transcription factor 14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:134,792,491...134,794,370
Ensembl chr 3:142,245,082...142,245,804 		JBrowse link
G SOX15 SRY-box transcription factor 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:7,619,804...7,621,791
Ensembl chr17:7,606,086...7,608,632 		JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
G SPHK1 sphingosine kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:70,331,370...70,336,043
Ensembl chr17:75,883,329...75,886,481 		JBrowse link
G SPHK2 sphingosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:45,620,980...45,631,786
Ensembl chr19:54,213,166...54,224,767 		JBrowse link
G STK36 serine/threonine kinase 36 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:105,930,030...105,960,718
Ensembl chr2B:224,525,226...224,555,583 		JBrowse link
G STXBP3 syntaxin binding protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,120,487...111,185,669
Ensembl chr 1:110,287,374...110,351,616 		JBrowse link
G SVBP small vasohibin binding protein involved_in ISO (PMID:31363758), (PMID:35482892) UniProt PMID:31363758 PMID:35482892 NCBI chr 1:42,105,405...42,115,721
Ensembl chr 1:43,482,870...43,492,577 		JBrowse link
G TBC1D23 TBC1 domain family member 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,353,716...97,418,083
Ensembl chr 3:104,049,807...104,098,760 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856 		JBrowse link
G TMX2 thioredoxin related transmembrane protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:52,953,360...52,979,685
Ensembl chr11:56,423,772...56,449,402 		JBrowse link
G TUBGCP2 tubulin gamma complex component 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:134,187,115...134,214,693 JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:3,012,890...3,061,831
Ensembl chr12:2,944,769...2,993,278 		JBrowse link
G UFC1 ubiquitin-fold modifier conjugating enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,545,095...136,571,327
Ensembl chr 1:140,479,007...140,484,143 		JBrowse link
G UFM1 ubiquitin fold modifier 1 involved_in ISO (PMID:29868776) UniProt PMID:29868776 NCBI chr13:19,571,114...19,584,259
Ensembl chr13:38,162,598...38,175,814 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:63,906,778...63,959,346
Ensembl chr2A:65,043,871...65,084,175 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
G UNC5C unc-5 netrin receptor C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:87,527,262...87,921,351
Ensembl chr 4:98,205,554...98,587,888 		JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) MGI PMID:23821644 NCBI chr  X:108,897,140...108,916,620
Ensembl chr  X:119,292,231...119,311,632 		JBrowse link
G UTP3 UTP3 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:53,530,782...53,532,877
Ensembl chr 4:59,877,815...59,879,254 		JBrowse link
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:10601036)
(PMID:10601035) 		MGI
TreeGrafter		 PMID:10601035 PMID:10601036 GO_REF:0000118 NCBI chr10:113,710,934...113,720,671 JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:70,964,829...70,997,702
Ensembl chr2A:72,078,829...72,111,463 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:95,659,443...96,525,316
Ensembl chr 8:97,860,720...98,698,271 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,347,559...111,419,866
Ensembl chr 1:110,512,347...110,584,155 		JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:144,437,075...144,443,516
Ensembl chr 3:152,019,013...152,024,502 		JBrowse link
G ZNF335 zinc finger protein 335 involved_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr20:42,287,518...42,312,169
Ensembl chr20:43,374,591...43,397,724 		JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 6:165,778,026...165,923,685
Ensembl chr 6:170,775,904...170,882,784 		JBrowse link
G AKT3 AKT serine/threonine kinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:219,107,482...219,463,140
Ensembl chr 1:224,480,784...224,824,838 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G CDH2 cadherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:21,210,001...21,435,919
Ensembl chr18:24,812,019...25,008,325 		JBrowse link
G CTNNA2 catenin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:79,594,694...80,745,885
Ensembl chr2A:81,303,559...82,307,258 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:23178126)
(PMID:25100583) 		MGI PMID:23178126 PMID:25100583 NCBI chr2A:72,969,693...73,030,427 JBrowse link
G FANCC FA complementation group C acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198 		JBrowse link
G FANCD2 FA complementation group D2 acts_upstream_of_or_within ISO (PMID:24483844) MGI PMID:24483844 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190 		JBrowse link
G FOXO3 forkhead box O3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G MAGEE2 MAGE family member E2 acts_upstream_of_or_within ISO (PMID:34464968) MGI PMID:34464968 NCBI chr  X:65,030,659...65,033,059
Ensembl chr  X:75,142,500...75,144,068 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:8951055) DFLAT PMID:8951055 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr21:32,665,361...32,741,592
Ensembl chr21:45,914,665...46,042,990 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17614943) MGI PMID:17614943 NCBI chr 1:202,328,987...202,354,440
Ensembl chr 1:207,320,937...207,346,295 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:19208814) CACAO PMID:19208814 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21423165) BHF-UCL PMID:21423165 NCBI chr22:30,951,866...30,973,608 JBrowse link
G SLC4A10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:48,917,958...49,278,724
Ensembl chr2B:166,371,645...166,647,554 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:26,546,177...26,572,301
Ensembl chr17:27,050,900...27,092,882 		JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chr 5:74,554,017...74,751,921
Ensembl chr 5:79,834,733...80,031,599 		JBrowse link
G VPS51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,452,483...60,474,049
Ensembl chr11:63,791,519...63,812,340 		JBrowse link
G ZNF335 zinc finger protein 335 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:42,287,518...42,312,169
Ensembl chr20:43,374,591...43,397,724 		JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:9367425) MGI PMID:9367425 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693 		JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) MGI PMID:18579678 NCBI chr 4:105,002,447...105,005,704 JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr20:22,519,942...22,524,262 JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
cell differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 involved_in IEA TreeGrafter
UniProt		 GO_REF:0000117 GO_REF:0000118 NCBI chr11:20,180,704...20,185,164
Ensembl chr11:20,092,540...20,097,727 		JBrowse link
G NOTCH1 notch receptor 1 ISO RGD PMID:20195794 RGD:2325285 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:86,719,650...86,727,607
Ensembl chr 1:121,774,940...121,775,347 		JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272) MGI PMID:8955272 NCBI chr13:59,821,614...59,829,671 JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:102,443,333...102,455,176
Ensembl chr2A:97,780,242...97,787,341 		JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) MGI PMID:25099998 Ensembl chr16:15,737,850...15,892,145 JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336 		JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725) MGI PMID:15677725 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:106,813,905...106,908,898
Ensembl chr11:110,657,803...110,753,114 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G FABP7 fatty acid binding protein 7 acts_upstream_of_or_within ISO (PMID:18001149) MGI PMID:18001149 NCBI chr 6:120,539,905...120,574,778
Ensembl chr 6:124,663,054...124,697,905 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18957199) MGI PMID:18957199 NCBI chr12:22,954,946...23,096,623 JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NFIB nuclear factor I B involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NGF nerve growth factor ISO RGD PMID:29409115 RGD:402463967 NCBI chr 1:87,223,597...87,276,759 JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:12834878 RGD:5133694 NCBI chr11:3,956,528...3,999,205
Ensembl chr11:4,068,119...4,110,474 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:18694563) UniProt PMID:18694563 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (PMID:12843296) BHF-UCL PMID:12843296 Ensembl chr22:44,988,647...45,044,841 JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr19:44,293,612...44,310,430
Ensembl chr19:52,950,317...52,966,146 		JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115 		JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:109,244,772...109,291,472
Ensembl chr 7:121,936,031...121,985,862 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
central nervous system formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr2A:54,608,711...54,816,083
Ensembl chr2A:55,822,415...55,961,925 		JBrowse link
G TIGD5 tigger transposable element derived 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:140,351,189...140,353,670
Ensembl chr 8:143,366,390...143,368,240 		JBrowse link
central nervous system interneuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCTN1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:108,182,496...108,232,202
Ensembl chr12:111,577,755...111,610,754 		JBrowse link
central nervous system maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,026,525...33,052,252
Ensembl chr  X:40,730,677...40,756,209 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219 		JBrowse link
central nervous system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
central nervous system myelin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in
acts_upstream_of_or_within 		ISO PMID:12210128
(PMID:17060448) 		UniProt
ARUK-UCL		 PMID:12210128 PMID:17060448 RGD:631995 NCBI chr 9:108,067,633...108,089,742
Ensembl chr 9:137,036,696...137,057,776 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:28063167) MGI PMID:28063167 NCBI chr11:46,694,967...46,797,500
Ensembl chr11:47,252,752...47,329,274 		JBrowse link
G CNTN1 contactin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,630,295...48,014,766
Ensembl chr12:48,492,564...48,670,126 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G MAG myelin associated glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401 		JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,291,307...8,346,822
Ensembl chr 7:7,643,780...7,684,246 		JBrowse link
G MOBP myelin associated oligodendrocyte basic protein ISO RGD PMID:9306245 RGD:27226697 NCBI chr 3:39,372,102...39,450,066
Ensembl chr 3:39,688,104...39,699,486 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr11:73,712,808...75,001,831
Ensembl chr11:77,338,422...77,743,909 		JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331 		JBrowse link
central nervous system myelin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523 		JBrowse link
G FA2H fatty acid 2-hydroxylase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:55,278,769...55,340,332
Ensembl chr16:74,632,179...74,693,710 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:57,052,219...57,088,105
Ensembl chr11:60,412,780...60,448,579 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:18082964) CACAO PMID:18082964 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
central nervous system myelination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:12524181 RGD:632029 NCBI chr17:3,492,304...3,517,882
Ensembl chr17:3,522,858...3,546,279 		JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:45,977,801...46,058,429
Ensembl chr20:47,041,469...47,123,214 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:24,840,106...24,906,309
Ensembl chr18:28,438,302...28,500,946 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:177,640,127...177,705,885
Ensembl chr 3:185,813,245...185,878,362 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:180,645,259...180,680,081
Ensembl chr 1:184,931,497...184,966,482 		JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,618,294...14,635,193
Ensembl chr17:14,842,577...14,858,896 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:29300891) MGI PMID:29300891 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678) MGI PMID:21935678 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G GPM6B glycoprotein M6B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:6,377,913...6,544,826
Ensembl chr  X:13,666,192...13,711,964 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:17006542) MGI PMID:17006542 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chr 1:135,391,321...135,424,100 JBrowse link
G MAG myelin associated glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401 		JBrowse link
G MAL mal, T cell differentiation protein acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr2A:104,355,020...104,382,849
Ensembl chr2A:95,930,315...95,956,573 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,052,219...57,088,105
Ensembl chr11:60,412,780...60,448,579 		JBrowse link
G NCSTN nicastrin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:135,697,592...135,713,293
Ensembl chr 1:139,618,229...139,633,911 		JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr10:133,682,456...133,683,445 JBrowse link
G PLP1 proteolipid protein 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:1694232) MGI
TreeGrafter		 PMID:1694232 GO_REF:0000118 NCBI chr  X:93,015,098...93,031,193
Ensembl chr  X:103,353,184...103,412,513 		JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:18,885,679...18,897,927
Ensembl chr22:36,713,310...36,723,439 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:29034508) MGI PMID:29034508 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
central nervous system neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP35 Rho GTPase activating protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:43,850,692...43,994,487
Ensembl chr19:52,435,379...52,521,104 		JBrowse link
G ARHGEF28 Rho guanine nucleotide exchange factor 28 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:41,376,631...41,690,868
Ensembl chr 5:41,976,692...42,231,634 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:20577052) MGI PMID:20577052 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:45,977,801...46,058,429
Ensembl chr20:47,041,469...47,123,214 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:24,840,106...24,906,309
Ensembl chr18:28,438,302...28,500,946 		JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (PMID:15208636) MGI PMID:15208636 NCBI chr17:43,186,255...43,218,436
Ensembl chr17:47,918,827...47,950,749 		JBrowse link
G PRKCA protein kinase C alpha ISO RGD PMID:18062921 RGD:2293300 NCBI chr17:60,246,485...60,747,158
Ensembl chr17:65,454,907...65,947,903 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr 8:137,330,777...137,677,306
Ensembl chr 8:140,412,773...140,684,898 		JBrowse link
central nervous system neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G BRINP1 BMP/retinoic acid inducible neural specific 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:90,296,199...90,499,503
Ensembl chr 9:118,646,433...118,792,727 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G FGF8 fibroblast growth factor 8 ISO development of dopaminergic neurons in the midbrain and serotonergic neurons in the rostral hindbrain RGD PMID:9630220 RGD:2289424 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:17314281 RGD:2325182 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:15158077 RGD:6480239 NCBI chr 4:74,727,321...75,164,407
Ensembl chr 4:85,459,225...85,857,321 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,587,876...35,599,971
Ensembl chr 9:36,390,409...36,402,949 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197 		JBrowse link
G KIAA0319 KIAA0319 ortholog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:24,377,666...24,483,388
Ensembl chr 6:24,713,922...24,815,300 		JBrowse link
G LEP leptin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519 		JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:17726113) MGI PMID:17726113 NCBI chr15:56,424,422...56,747,075
Ensembl chr15:72,328,079...72,347,016 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17151281) MGI PMID:17151281 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420 		JBrowse link
G LOC100967527 AGBL carboxypeptidase 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:47,807,888...49,264,213
Ensembl chr 1:49,511,379...49,560,314
Ensembl chr 1:49,511,379...49,560,314 		JBrowse link
G LOC100990531 uncharacterized LOC100990531 acts_upstream_of_or_within ISO (PMID:16680166) MGI PMID:16680166 NCBI chr14:9,545,147...9,572,309 JBrowse link
G MAP2 microtubule associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:96,681,268...96,991,650
Ensembl chr2B:215,314,857...215,391,728 		JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:16410412) MGI PMID:16410412 NCBI chr 4:105,002,447...105,005,704 JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in ISO (PMID:27223325) UniProt PMID:27223325 NCBI chr19:42,951,633...42,987,992 JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657 		JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:8809809) MGI PMID:8809809 NCBI chr12:5,551,734...5,615,981
Ensembl chr12:5,530,508...5,533,989 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,814,896...47,911,206
Ensembl chr14:66,693,863...66,790,122 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,222,725...27,385,713
Ensembl chr17:27,746,797...27,840,623 		JBrowse link
G TTC36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:113,364,559...113,368,586
Ensembl chr11:117,295,191...117,298,928 		JBrowse link
central nervous system neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APBB1 amyloid beta precursor protein binding family B member 1 acts_upstream_of ISO (PMID:18278038) MGI PMID:18278038 NCBI chr11:6,526,477...6,550,509
Ensembl chr11:6,209,812...6,225,972 		JBrowse link
G APP amyloid beta precursor protein acts_upstream_of ISO (PMID:18278038) MGI PMID:18278038 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832 		JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr14:79,795,262...79,898,472 JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:83,185,040...83,353,239
Ensembl chr10:86,837,469...86,912,912 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:87,125,911...87,523,084
Ensembl chr 4:98,088,072...98,195,848 		JBrowse link
G BRINP2 BMP/retinoic acid inducible neural specific 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:152,694,667...152,806,085
Ensembl chr 1:156,450,411...156,502,742 		JBrowse link
G BRINP3 BMP/retinoic acid inducible neural specific 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:165,586,510...165,972,173
Ensembl chr 1:169,873,541...170,258,015 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659 		JBrowse link
G BRSK2 BR serine/threonine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:1,424,873...1,495,630
Ensembl chr11:1,473,129...1,521,339 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:6945603) MGI PMID:6945603 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G CDON cell adhesion associated, oncogene regulated acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:120,772,160...120,877,529
Ensembl chr11:124,685,084...124,786,091 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:180,645,259...180,680,081
Ensembl chr 1:184,931,497...184,966,482 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:98,051,788...98,425,676
Ensembl chr11:101,536,471...101,909,194 		JBrowse link
G EFNA1 ephrin A1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:130,475,128...130,482,531
Ensembl chr 1:134,083,855...134,091,228 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (PMID:15340832) MGI PMID:15340832 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within ISO (PMID:15340832) MGI PMID:15340832 NCBI chr 7:147,058,349...147,065,038 JBrowse link
G EPHA2 EPH receptor A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:15,259,915...15,292,983
Ensembl chr 1:16,253,513...16,284,787 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of ISO (PMID:20431123)
(PMID:15496443) 		MGI PMID:15496443 PMID:20431123 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of ISO (PMID:15882580) MGI PMID:15882580 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of ISO (PMID:15056720) MGI PMID:15056720 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of
acts_upstream_of_or_within 		ISO
IEA 		(PMID:15148302) MGI
Ensembl		 PMID:15148302 GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:15229182) MGI PMID:15229182 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420 		JBrowse link
G LOC100990531 uncharacterized LOC100990531 acts_upstream_of ISO (PMID:7605629)
(PMID:14704420) 		MGI PMID:7605629 PMID:14704420 NCBI chr14:9,545,147...9,572,309 JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:15145949) MGI PMID:15145949 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:18262389 RGD:2317458 NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159 		JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr18:14,944,432...15,113,313
Ensembl chr18:18,641,135...18,740,813 		JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chr 7:148,622,701...148,628,532 JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:19592574)
(PMID:10830170) 		MGI PMID:10830170 PMID:19592574 NCBI chr 4:39,683,420...39,689,651 JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of ISO (PMID:11566099) MGI PMID:11566099 NCBI chr21:19,387,860...19,391,291 JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (PMID:17141158) MGI PMID:17141158 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272)
(PMID:8876243) 		MGI PMID:8876243 PMID:8955272 NCBI chr13:59,821,614...59,829,671 JBrowse link
G PTF1A pancreas associated transcription factor 1a acts_upstream_of_or_within ISO (PMID:17301087) MGI PMID:17301087 NCBI chr10:23,356,165...23,359,579 JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of ISO (PMID:18024993) MGI PMID:18024993 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571630) MGI PMID:16571630 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:18215621) MGI PMID:18215621 NCBI chr12:62,361,631...62,780,805
Ensembl chr12:64,971,818...65,388,694 		JBrowse link
G SPOCK1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 involved_in ISO (PMID:10640720) UniProt PMID:10640720 NCBI chr 5:132,372,283...132,890,168
Ensembl chr 5:138,512,523...138,797,416 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:46,524,484...46,540,595
Ensembl chr 1:48,042,594...48,048,622 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:3,012,890...3,061,831
Ensembl chr12:2,944,769...2,993,278 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:8630490) MGI PMID:8630490 NCBI chr14:54,797,734...54,821,081 JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 8:119,473,607...119,668,790
Ensembl chr 8:122,401,567...122,404,080 		JBrowse link
central nervous system projection neuron axonogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 8:61,119,561...61,122,827 JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:15608630)
(PMID:11344259), (PMID:14687550) 		MGI PMID:11344259 PMID:14687550 PMID:15608630 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361 		JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387638) MGI PMID:16387638 NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G EPHB1 EPH receptor B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802 		JBrowse link
G EPHB2 EPH receptor B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118 		JBrowse link
G EPHB3 EPH receptor B3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:181,604,188...181,624,744
Ensembl chr 3:190,089,522...190,104,905 		JBrowse link
G KIFBP kinesin family binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:65,455,924...65,484,140
Ensembl chr10:67,989,492...68,017,898 		JBrowse link
G MYCBP2 MYC binding protein 2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:17901218) Ensembl
UniProt		 PMID:17901218 GO_REF:0000107 NCBI chr13:58,262,251...58,544,819
Ensembl chr13:77,306,509...77,586,843 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162 		JBrowse link
G PRDM8 PR/SET domain 8 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 4:43,993,635...44,014,430 JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:37,515,420...37,621,473
Ensembl chr19:46,042,387...46,127,429 		JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZIC2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr13:81,151,669...81,156,648 JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:126,691,534...126,705,788
Ensembl chr  X:136,954,024...136,967,819 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr11:52,898,181...52,902,656
Ensembl chr11:56,368,433...56,373,129 		JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr11:106,813,905...106,908,898
Ensembl chr11:110,657,803...110,753,114 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:76,723,071...76,821,611
Ensembl chr 9:104,849,496...104,925,422 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
G NAV2 neuron navigator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,370,095...20,143,255
Ensembl chr11:19,288,598...20,055,758 		JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in ISO (PMID:16504944) UniProt PMID:16504944 NCBI chr17:17,680,415...17,685,053 JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387 		JBrowse link
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr21:32,665,361...32,741,592
Ensembl chr21:45,914,665...46,042,990 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in ISO (PMID:23622239) UniProt PMID:23622239 NCBI chr 1:26,254,688...26,261,918 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910 		JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:20153830) MGI
TreeGrafter		 PMID:20153830 GO_REF:0000118 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:29,538,723...29,542,625
Ensembl chr16:48,427,645...48,430,512 		JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:84,663,030...86,170,778
Ensembl chr 4:95,339,460...96,807,748 		JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr10:134,068,936...134,132,964 JBrowse link
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr 7:127,896,148...127,947,122
Ensembl chr 7:140,392,620...140,443,591 		JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within 		ISO (PMID:23042739)
(PMID:21800304) 		MGI PMID:21800304 PMID:23042739 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:20537373) BHF-UCL PMID:20537373 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277 		JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:57,288,297...57,674,685
Ensembl chr  X:67,359,364...67,739,114 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr12:129,549,399...129,579,087 JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G EGF epidermal growth factor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G PSMG1 proteasome assembly chaperone 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:25,526,270...25,535,005
Ensembl chr21:38,876,026...38,884,027 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of
involved_in 		IEA
ISO 		(PMID:22095825)
(PMID:14687547) 		Ensembl
UniProt		 PMID:14687547 PMID:22095825 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G ZNF423 zinc finger protein 423 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:29,748,405...30,118,999
Ensembl chr16:48,639,118...48,969,727 		JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA2 plexin A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:183,600,533...183,848,418
Ensembl chr 1:188,408,048...188,603,208 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:58,894,939...58,923,176
Ensembl chr10:61,223,925...61,329,657 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:1,406,335...1,438,587
Ensembl chr17:1,306,509...1,336,569 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:3,141,147...3,177,448
Ensembl chr22:19,632,359...19,668,858 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:143,412,303...143,437,090
Ensembl chr  X:153,298,690...153,324,228 		JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr10:115,603,040...115,607,245 JBrowse link
G SAMD4B sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr19:36,440,769...36,483,953
Ensembl chr19:45,002,848...45,031,649 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G ATXN2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chr12:109,024,620...109,174,135
Ensembl chr12:112,419,337...112,566,360 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163)
(PMID:7834360)
(PMID:10630211) 		MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:20153830) MGI
TreeGrafter		 PMID:20153830 GO_REF:0000118 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:42,555,131...42,785,228
Ensembl chr15:60,848,493...61,017,244 		JBrowse link
G LDB1 LIM domain binding 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,707,470...98,722,771
Ensembl chr10:102,179,757...102,184,047 		JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chr10:68,286,359...68,321,349
Ensembl chr10:70,810,881...70,828,781 		JBrowse link
G RORA RAR related orphan receptor A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:24491816)
(PMID:21937600) 		MGI PMID:21937600 PMID:24491816 NCBI chr18:40,594,124...40,639,720 JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr 5:106,106,112...106,132,355
Ensembl chr 5:111,908,842...111,935,029 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:23,924,628...23,973,282
Ensembl chr22:42,128,224...42,174,850 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO (PMID:16906134) MGI PMID:16906134 NCBI chr16:54,727,601...54,763,458
Ensembl chr16:70,086,735...70,121,902 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205)
(PMID:20577052) 		MGI PMID:16625205 PMID:20577052 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:43,281,011...43,292,992
Ensembl chr 1:44,652,906...44,664,401 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:19816510) BHF-UCL PMID:19816510 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
G KLHL1 kelch like family member 1 acts_upstream_of_or_within ISO (PMID:17005861) MGI PMID:17005861 NCBI chr13:50,906,581...51,335,692
Ensembl chr13:69,691,537...70,118,448 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G SEZ6 seizure related 6 homolog acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr17:27,768,229...27,819,257
Ensembl chr17:28,301,359...28,327,354 		JBrowse link
G SEZ6L seizure related 6 homolog like acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:16814779) MGI
UniProt		 PMID:16814779 GO_REF:0000117 NCBI chr22:7,230,597...7,445,397
Ensembl chr22:25,077,259...25,163,881 		JBrowse link
G SEZ6L2 seizure related 6 homolog like 2 acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 Ensembl chr16:30,240,276...30,267,689 JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARCN1 archain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:113,411,166...113,441,792
Ensembl chr11:117,341,427...117,371,589 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G COQ8B coenzyme Q8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,735,725...37,761,160
Ensembl chr19:46,242,576...46,267,503 		JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:62,042,617...62,086,634
Ensembl chr11:65,365,588...65,409,207 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr2B:44,785,808...44,883,977
Ensembl chr2B:162,034,161...162,124,151 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245 		JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900 		JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chr12:41,652,954...41,656,393
Ensembl chr12:42,525,858...42,527,426 		JBrowse link
G ARHGAP32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chr11:123,780,028...124,096,494
Ensembl chr11:127,684,622...127,909,822 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:16880690) MGI PMID:16880690 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G ATRN attractin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:3,556,445...3,733,322
Ensembl chr20:3,315,278...3,486,628 		JBrowse link
G CCN3 cellular communication network factor 3 ISO RGD PMID:19286457 RGD:2306292 NCBI chr 8:116,105,935...116,114,241
Ensembl chr 8:118,855,445...118,865,039 		JBrowse link
G CCR1 C-C motif chemokine receptor 1 ISO RGD PMID:12541321 RGD:5688179 NCBI chr 3:46,107,526...46,114,229
Ensembl chr 3:47,214,688...47,215,755 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr2B:106,217,926...106,220,444 JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A ISO RGD PMID:9693786 RGD:8552681 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G CKB creatine kinase B ISO RGD PMID:12093362 RGD:625711 NCBI chr14:84,145,931...84,149,093 JBrowse link
G CNTN1 contactin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:47,630,295...48,014,766
Ensembl chr12:48,492,564...48,670,126 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:73,122,305...73,265,343
Ensembl chr 5:78,402,466...78,544,807 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chr 7:31,265,619...31,313,902
Ensembl chr 7:31,386,026...31,434,220 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:16329132 RGD:1599699 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G EN1 engrailed homeobox 1 involved_in ISO (PMID:8848044) ParkinsonsUK-UCL PMID:8848044 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:16542644 RGD:1601098 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G FCGR2B Fc gamma receptor IIb involved_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637 		JBrowse link
G FOXC1 forkhead box C1 involved_in ISO (PMID:19668217) UniProt PMID:19668217 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:3,129,481...3,357,495
Ensembl chr15:23,981,359...24,058,357 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:7057182 RGD:2301991 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G GDF10 growth differentiation factor 10 ISO RGD PMID:8605043 RGD:631791 NCBI chr10:46,498,600...46,511,933 JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO RGD PMID:7182074 RGD:10047093 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GPX4 glutathione peroxidase 4 acts_upstream_of_or_within ISO (PMID:24599700) MGI PMID:24599700 NCBI chr19:20,904...23,828 JBrowse link
G HAP1 huntingtin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,578,658...15,596,313
Ensembl chr17:15,797,949...15,810,299 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:19115409 RGD:10041070 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9764759 RGD:10059383 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21443795 PMID:23397157 RGD:10403039 RGD:12904969 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974 		JBrowse link
G INSR insulin receptor ISO RGD PMID:23397157 RGD:10403039 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chr11:17,788,010...17,936,591
Ensembl chr11:17,472,158...17,517,892 		JBrowse link
G LDB1 LIM domain binding 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,707,470...98,722,771
Ensembl chr10:102,179,757...102,184,047 		JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G LOC100978919 T-cell surface glycoprotein CD3 epsilon chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,142,200...113,153,928
Ensembl chr11:117,074,041...117,085,625 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr 9:82,013,960...82,179,227
Ensembl chr 9:110,179,600...110,279,038 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) RGD
MGI		 PMID:14751287 PMID:18571096 RGD:12743658 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MYO16 myosin XVI involved_in ISO PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr13:89,754,451...90,338,658
Ensembl chr13:108,922,993...109,473,752 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:10803578 PMID:15876152 RGD:2293531 RGD:5688232 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:10803578 RGD:2293531 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:10803578 RGD:2293531 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NCSTN nicastrin ISO RGD PMID:16298244 RGD:13801190 NCBI chr 1:135,697,592...135,713,293
Ensembl chr 1:139,618,229...139,633,911 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:10398678) RGD
UniProt		 PMID:10398678 PMID:12242038 RGD:1625048 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (PMID:20393820) UniProt PMID:20393820 NCBI chr 3:14,869,292...14,973,977
Ensembl chr 3:15,220,110...15,306,242 		JBrowse link
G NTM neurotrimin ISO RGD PMID:12373100 RGD:2314481 NCBI chr11:126,189,660...127,154,890
Ensembl chr11:130,617,876...131,037,876 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISO RGD PMID:20395366 RGD:11533946 NCBI chr11:72,372,577...72,524,817
Ensembl chr11:76,015,998...76,104,197 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11688562 RGD:8552644 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PDSS2 decaprenyl diphosphate synthase subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:104,963,942...105,272,807
Ensembl chr 6:108,833,223...109,137,055 		JBrowse link
G PFDN1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chr 5:135,611,791...135,669,895
Ensembl chr 5:141,729,128...141,786,822 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:6,824,377...6,832,971
Ensembl chr12:6,742,251...6,748,741 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15763176 RGD:7777107 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:16298244 RGD:13801190 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:9917071 RGD:10045971 NCBI chr 1:99,382,924...99,474,053
Ensembl chr 1:98,105,913...98,196,723 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISO (PMID:15543146) UniProt PMID:15543146 NCBI chr10:23,356,165...23,359,579 JBrowse link
G PTN pleiotrophin ISO RGD PMID:8653419 RGD:10043831 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chr 3:38,444,421...38,546,364
Ensembl chr 3:38,728,897...38,812,202 		JBrowse link
G SDF4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:102,443,333...102,455,176
Ensembl chr2A:97,780,242...97,787,341 		JBrowse link
G SSTR1 somatostatin receptor 1 ISO RGD PMID:9166718 RGD:2325007 NCBI chr14:18,968,969...18,973,560
Ensembl chr14:37,329,309...37,330,484 		JBrowse link
G SSTR2 somatostatin receptor 2 ISO RGD PMID:9166718 RGD:2325007 NCBI chr17:67,093,013...67,099,086
Ensembl chr17:72,553,506...72,554,615 		JBrowse link
G SSTR3 somatostatin receptor 3 ISO RGD PMID:9166718 RGD:2325007 NCBI chr22:18,116,993...18,125,170
Ensembl chr22:35,954,232...35,955,488 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 1:219,660,496...219,669,134
Ensembl chr 1:225,042,281...225,050,259 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:11344116) MGI PMID:11344116 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 1:154,586,423...154,711,621
Ensembl chr 1:158,280,994...158,313,915 		JBrowse link
G CBS cystathionine beta-synthase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:11456442) MGI PMID:11456442 NCBI chr 9:58,079,700...58,082,849
Ensembl chr 9:86,139,009...86,140,045 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:206,794,245...206,830,840
Ensembl chr 1:211,819,259...211,855,885 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17166916) MGI PMID:17166916 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr18:40,594,124...40,639,720 JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:19816510) BHF-UCL PMID:19816510 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD4 frizzled class receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:81,973,680...82,007,733
Ensembl chr11:85,611,989...85,616,065 		JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:106,813,905...106,908,898
Ensembl chr11:110,657,803...110,753,114 		JBrowse link
G EFHC1 EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,972,041...52,044,219
Ensembl chr 6:53,239,474...53,344,404 		JBrowse link
G EGFR epidermal growth factor receptor acts_upstream_of_or_within ISO (PMID:7618084) MGI PMID:7618084 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615 		JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (PMID:22726441) UniProt PMID:22726441 NCBI chr  X:127,764,648...128,353,928
Ensembl chr  X:138,023,016...138,103,217 		JBrowse link
G HTR6 5-hydroxytryptamine receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,619,683...18,635,822
Ensembl chr 1:19,662,978...19,678,680 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270) MGI PMID:16920270 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18786357) MGI PMID:18786357
G PEX13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:61,108,970...61,143,615
Ensembl chr2A:62,250,887...62,285,151 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G RHOA ras homolog family member A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:49,282,009...49,339,887 JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 6:165,778,026...165,923,685
Ensembl chr 6:170,775,904...170,882,784 		JBrowse link
G AHSG alpha 2-HS glycoprotein ISO RGD PMID:2423927 RGD:1626077 NCBI chr 3:183,644,223...183,652,620
Ensembl chr 3:192,110,770...192,119,915 		JBrowse link
G AKIRIN2 akirin 2 involved_in ISO (PMID:27871306) UniProt PMID:27871306 NCBI chr 6:85,549,728...85,577,114 JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:172,674,890...172,737,426
Ensembl chr 1:176,988,297...177,050,810 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205) MGI PMID:16625205 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832 		JBrowse link
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:23527305) RGD
MGI		 PMID:19362129 PMID:23527305 RGD:11576282 NCBI chr19:38,854,243...38,882,034
Ensembl chr19:47,358,281...47,384,716 		JBrowse link
G BAD BCL2 associated agonist of cell death ISO RGD PMID:9813151 RGD:2315711 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:9813151 GO_REF:0000107 RGD:2315711 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G BCL2 BCL2 apoptosis regulator ISO RGD PMID:9813151 RGD:2315711 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BCL2A1 BCL2 related protein A1 ISO RGD PMID:9813151 RGD:2315711 NCBI chr15:58,925,853...58,935,122
Ensembl chr15:77,882,940...77,893,628 		JBrowse link
G BCL2L1 BCL2 like 1 ISO RGD PMID:9813151 RGD:2315711 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585 		JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:16765336 RGD:11561980 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634 		JBrowse link
G BTBD3 BTB domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:11,837,299...11,873,258
Ensembl chr20:11,854,386...11,863,535 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:22473424 RGD:10411906 NCBI chr12:2,166,672...2,817,827
Ensembl chr12:2,114,140...2,744,826 		JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO RGD PMID:10749215 RGD:11576295 NCBI chr  X:33,967,329...34,374,385
Ensembl chr  X:41,659,295...42,066,570 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:177,640,127...177,705,885
Ensembl chr 3:185,813,245...185,878,362 		JBrowse link
G CCDC85C coiled-coil domain containing 85C involved_in ISO (PMID:22056358) UniProt PMID:22056358 NCBI chr14:80,134,889...80,229,717 JBrowse link
G CDH2 cadherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:21,210,001...21,435,919
Ensembl chr18:24,812,019...25,008,325 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDON cell adhesion associated, oncogene regulated acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:120,772,160...120,877,529
Ensembl chr11:124,685,084...124,786,091 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487 		JBrowse link
G CEP120 centrosomal protein 120 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:118,736,158...118,815,194
Ensembl chr 5:124,514,996...124,593,259 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:21768377) UniProt PMID:21768377 NCBI chr2B:76,285,115...76,322,703
Ensembl chr2B:194,204,613...194,242,956 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:1,406,335...1,438,587
Ensembl chr17:1,306,509...1,336,569 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:3,141,147...3,177,448
Ensembl chr22:19,632,359...19,668,858 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:12801913 RGD:634609 NCBI chr20:19,992,092...20,010,809
Ensembl chr20:19,959,356...19,979,094 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 ISO RGD PMID:7735332 RGD:11565823 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126 		JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 ISO RGD PMID:7735332 RGD:11565823 NCBI chr16:38,426,399...38,466,575
Ensembl chr16:57,557,270...57,596,218 		JBrowse link
G DAB1 DAB adaptor protein 1 ISO RGD PMID:20368265 RGD:2324624 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DCC DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chr18:45,717,924...46,913,998
Ensembl chr18:49,268,812...50,255,155 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18997113) MGI PMID:18997113 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987 		JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 ISO RGD PMID:14597197 RGD:152975667 NCBI chr17:7,219,911...7,247,509
Ensembl chr17:7,207,483...7,235,985 		JBrowse link
G DMD dystrophin ISO RGD PMID:1454857 RGD:12880362 NCBI chr  X:23,728,650...26,338,849
Ensembl chr  X:31,282,415...33,492,733 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:12764040)
(PMID:16892058)
(PMID:25100583) 		MGI PMID:12764040 PMID:16892058 PMID:25100583 NCBI chr2A:72,969,693...73,030,427 JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:30186101) MGI PMID:30186101 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407 		JBrowse link
G FILIP1 filamin A interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:73,135,086...73,334,630
Ensembl chr 6:76,429,175...76,548,549 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:76,723,071...76,821,611
Ensembl chr 9:104,849,496...104,925,422 		JBrowse link
G FLNA filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:143,799,088...143,825,282 JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:32385110 RGD:405649740 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G FOXP2 forkhead box P2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:7057182 RGD:2301991 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331 		JBrowse link
G GNG12 G protein subunit gamma 12 ISO RGD PMID:9003074 RGD:2314446 NCBI chr 1:66,941,315...67,071,442
Ensembl chr 1:68,901,264...68,903,487 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr 5:148,879,996...149,206,914
Ensembl chr 5:154,879,080...155,204,660 		JBrowse link
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:14597197 RGD:152975667 NCBI chr 4:149,566,563...149,712,135
Ensembl chr 4:161,380,933...161,524,376 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:10963597)
(PMID:12657691) 		MGI PMID:10963597 PMID:12657691 NCBI chr 9:108,198,350...108,228,887
Ensembl chr 9:137,168,722...137,197,382 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19409459 RGD:2325985 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19409459 RGD:2325985 NCBI chr12:13,543,104...13,987,437
Ensembl chr12:13,969,387...14,388,799 		JBrowse link
G GRIP1 glutamate receptor interacting protein 1 ISO RGD PMID:14597197 RGD:152975667 NCBI chr12:21,841,611...22,562,418
Ensembl chr12:22,744,177...23,069,480 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:18054780 PMID:22102872 RGD:10002783 RGD:10041004 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr12:5,027,333...5,037,136
Ensembl chr12:4,950,938...4,952,425 		JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:113,187,158...113,256,260
Ensembl chr 1:127,090,829...127,092,328 		JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:112,860,887...112,884,687
Ensembl chr 1:127,458,968...127,480,182 		JBrowse link
G KDM1A lysine demethylase 1A ISO RGD PMID:20164337 RGD:9588288 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
G KIF26A kinesin family member 26A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:84,762,903...84,807,440
Ensembl chr14:104,570,327...104,611,245 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr12:31,340,201...31,376,849
Ensembl chr12:31,599,376...31,635,327 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:26371318), (PMID:28053041) Ensembl
UniProt		 PMID:26371318 PMID:28053041 GO_REF:0000107 NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796 		JBrowse link
G LOC100971602 tubulin beta-2B chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:3,063,074...3,066,315
Ensembl chr 6:3,080,751...3,255,882 		JBrowse link
G LOC100990531 uncharacterized LOC100990531 acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chr14:9,545,147...9,572,309 JBrowse link
G LOC100994157 histone H2AX ISO RGD PMID:3622934 RGD:8693731 NCBI chr11:113,932,078...113,933,679 JBrowse link
G LOC117974235 transmembrane protein 14B involved_in ISO (PMID:29033352) UniProt PMID:29033352 NCBI chr 6:10,588,720...10,597,959
Ensembl chr 6:10,867,833...10,879,787 		JBrowse link
G LRP1 LDL receptor related protein 1 ISO RGD PMID:8930375 RGD:10046019 NCBI chr12:31,713,938...31,799,287
Ensembl chr12:31,966,149...32,051,979 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270) MGI PMID:16920270 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G LRP8 LDL receptor related protein 8 ISO RGD PMID:20368265 RGD:2324624 NCBI chr 1:52,515,534...52,600,390
Ensembl chr 1:54,114,909...54,199,452 		JBrowse link
G MCPH1 microcephalin 1 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 8:624,877...877,839
Ensembl chr 8:6,409,072...6,646,394 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MGARP mitochondria localized glutamic acid rich protein involved_in ISO (PMID:24323429) UniProt PMID:24323429 NCBI chr 4:131,629,272...131,643,996
Ensembl chr 4:142,936,873...142,952,601 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,991,047...51,011,628
Ensembl chr18:54,326,053...54,346,454 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NDE1 nudE neurodevelopment protein 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 Ensembl chr16:15,948,881...16,027,986 JBrowse link
G NEFH neurofilament heavy chain ISO RGD PMID:10439464 RGD:9743942 NCBI chr22:10,525,738...10,536,788 JBrowse link
G NEFL neurofilament light chain ISO RGD PMID:10439464 RGD:9743942 NCBI chr 8:24,218,510...24,224,627
Ensembl chr 8:21,134,533...21,140,694 		JBrowse link
G NEFM neurofilament medium chain ISO RGD PMID:10439464 RGD:9743942 NCBI chr 8:24,181,335...24,186,701
Ensembl chr 8:21,098,005...21,107,468 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394) MGI PMID:18477394 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NPY neuropeptide Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 ISO RGD PMID:21056632 RGD:124713572 NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162 		JBrowse link
G NSUN5 NOP2/Sun RNA methyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,455,353...80,461,316 JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within
involved_in 		IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,814,896...47,911,206
Ensembl chr14:66,693,863...66,790,122 		JBrowse link
G PAX5 paired box 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:36,677,369...36,876,678
Ensembl chr 9:37,474,267...37,673,684 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PHACTR1 phosphatase and actin regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,560,862...13,136,126
Ensembl chr 6:12,922,871...13,505,609 		JBrowse link
G PLCB1 phospholipase C beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:8,106,665...8,858,572
Ensembl chr20:7,887,960...8,636,019 		JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chr17:44,224,007...44,240,906
Ensembl chr17:49,098,089...49,126,932 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G RELN reelin acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:10436054 GO_REF:0000107 RGD:634730 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr2B:52,514,918...52,667,225
Ensembl chr2B:169,928,323...170,027,509 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:16581179 RGD:12879481 NCBI chr 1:42,224,273...42,257,184
Ensembl chr 1:43,600,733...43,634,143 		JBrowse link
G SLC2A3 solute carrier family 2 member 3 ISO RGD PMID:16581179 RGD:12879481 NCBI chr12:8,045,058...8,062,116
Ensembl chr12:8,408,457...8,423,466 		JBrowse link
G SLC38A2 solute carrier family 38 member 2 ISO RGD PMID:21718781 RGD:9999217 NCBI chr12:42,359,637...42,374,251
Ensembl chr12:43,230,007...43,244,343 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:17920017) MGI
TreeGrafter		 PMID:17920017 GO_REF:0000118 NCBI chr 8:38,029,394...38,154,189
Ensembl chr 8:35,219,219...35,329,134 		JBrowse link
G TACC2 transforming acidic coiled-coil containing protein 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:17920017) MGI
TreeGrafter		 PMID:17920017 GO_REF:0000118 NCBI chr10:118,564,005...118,826,292
Ensembl chr10:121,976,980...122,237,505 		JBrowse link
G TACC3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:17920017) MGI
TreeGrafter		 PMID:17920017 GO_REF:0000118 NCBI chr 4:1,858,595...1,882,727
Ensembl chr 4:1,772,836...1,796,019 		JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in ISO (PMID:30186101) RGD
MGI		 PMID:10749215 PMID:30186101 RGD:11576295 NCBI chr2B:48,709,687...48,719,382 JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:52,966,907...52,981,024
Ensembl chr20:54,255,489...54,265,432 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:21295554 RGD:5128671 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
G TRAPPC9 trafficking protein particle complex subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:136,402,736...137,180,507
Ensembl chr 8:139,644,041...140,214,782 		JBrowse link
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:104,007,708...104,060,938
Ensembl chr 9:132,638,003...132,675,759 		JBrowse link
G TUBB2A tubulin beta 2A class IIa involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:2,993,653...2,997,570
Ensembl chr 6:3,080,751...3,255,882 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) MGI PMID:34235142 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:20368265 RGD:2324624 NCBI chr 9:2,428,639...2,463,796
Ensembl chr 9:2,621,199...2,653,980 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,347,559...111,419,866
Ensembl chr 1:110,512,347...110,584,155 		JBrowse link
G WDR62 WD repeat domain 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,973,725...33,030,297
Ensembl chr19:41,721,281...41,777,038 		JBrowse link
G XAB2 XPA binding protein 2 ISO RGD PMID:12801913 RGD:634609 NCBI chr19:6,909,281...6,919,332
Ensembl chr19:7,764,264...7,774,305 		JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon acts_upstream_of_or_within ISO (PMID:12796778) MGI PMID:12796778 NCBI chr17:1,332,004...1,387,120
Ensembl chr17:1,229,080...1,285,470 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 1:219,660,496...219,669,134
Ensembl chr 1:225,042,281...225,050,259 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr 8:26,729,767...26,749,277
Ensembl chr 8:23,932,846...23,952,377 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RAC3 Rac family small GTPase 3 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chr17:76,436,264...76,439,492
Ensembl chr17:82,133,217...82,143,623 		JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18786356)
(PMID:15028753) 		MGI PMID:15028753 PMID:18786356
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:17460091) MGI PMID:17460091 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:180,645,259...180,680,081
Ensembl chr 1:184,931,497...184,966,482 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17409246) MGI PMID:17409246 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G DRD2 dopamine receptor D2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378 		JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C22H21orf91 chromosome 22 C21orf91 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:4,524,103...4,554,496
Ensembl chr21:17,888,992...17,918,985 		JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 involved_in ISO (PMID:23948251) UniProt PMID:23948251 NCBI chr 1:4,867,636...4,947,401
Ensembl chr 1:6,125,525...6,191,991 		JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:49,288,364...49,444,457
Ensembl chr 1:50,853,276...50,951,058 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:23178126) MGI PMID:23178126 NCBI chr2A:72,969,693...73,030,427 JBrowse link
G EOMES eomesodermin involved_in ISO (PMID:18940588) UniProt PMID:18940588 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO (PMID:22951639) MGI PMID:22951639 NCBI chr11:70,494,185...70,585,921
Ensembl chr11:73,796,347...73,885,996 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:57,288,297...57,674,685
Ensembl chr  X:67,359,364...67,739,114 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO RGD PMID:16144905 RGD:1601501 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:54,285,587...54,371,376
Ensembl chr15:73,881,500...73,966,506 		JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:55,246,933...55,553,839
Ensembl chr 8:56,922,773...57,219,410 		JBrowse link
G ZNF335 zinc finger protein 335 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:42,287,518...42,312,169
Ensembl chr20:43,374,591...43,397,724 		JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,896,177...37,942,040
Ensembl chr16:57,036,425...57,074,221 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G P2RY12 purinergic receptor P2Y12 involved_in ISO PMID:17299767
PMID:18183622 		ARUK-UCL PMID:17299767 PMID:18183622 RGD:13673751 RGD:13673786 NCBI chr 3:148,364,151...148,412,231 JBrowse link
G RTN4 reticulon 4 involved_in ISO (PMID:20093372) UniProt PMID:20093372 NCBI chr2A:55,129,272...55,207,031 JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,347,559...111,419,866
Ensembl chr 1:110,512,347...110,584,155 		JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (PMID:20956536) MGI PMID:20956536 NCBI chr2B:66,086,654...66,307,309 JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr11:102,895,611...102,994,447
Ensembl chr11:106,371,759...106,469,989 		JBrowse link
G DAB1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:9338784) RGD
UniProt
Ensembl		 PMID:9338784 PMID:18160654 GO_REF:0000107 RGD:2324689 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DISC1 DISC1 scaffold protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:106,813,905...106,908,898
Ensembl chr11:110,657,803...110,753,114 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:193,913,712...193,934,123
Ensembl chr 3:203,856,374...203,876,537 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in ISO (PMID:20624590) DFLAT PMID:20624590 NCBI chr17:43,186,255...43,218,436
Ensembl chr17:47,918,827...47,950,749 		JBrowse link
G POFUT3 protein O-fucosyltransferase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:32,685,110...32,788,502
Ensembl chr 8:29,872,097...29,974,524 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (PMID:12130536) MGI PMID:12130536 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G POU3F3 POU class 3 homeobox 3 acts_upstream_of_or_within ISO (PMID:12130536) MGI PMID:12130536 NCBI chr2A:96,967,943...96,972,378 JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:17409253) MGI PMID:17409253 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 3:138,772,581...138,780,763
Ensembl chr 3:146,369,779...146,377,233 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr17:18,867,241...18,921,792
Ensembl chr17:19,193,860...19,236,427 		JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:37,896,177...37,942,040
Ensembl chr16:57,036,425...57,074,221 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:23431145) MGI PMID:23431145 NCBI chr 8:61,119,561...61,122,827 JBrowse link
G DMRTA2 DMRT like family A2 acts_upstream_of_or_within ISO (PMID:22923088)
(PMID:23056351) 		MGI PMID:22923088 PMID:23056351 NCBI chr 1:49,659,379...49,665,262 JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:15147765) MGI PMID:15147765 NCBI chr2A:72,969,693...73,030,427 JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G EOMES eomesodermin involved_in
acts_upstream_of_or_within 		ISO (PMID:30186101)
(PMID:23431145) 		MGI PMID:23431145 PMID:30186101 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 acts_upstream_of_or_within ISO (PMID:17828260) MGI PMID:17828260 NCBI chr 5:21,773,283...21,785,746
Ensembl chr 5:21,910,463...21,918,776 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:30186101) Ensembl
MGI		 PMID:30186101 GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G TRA2B transformer 2 beta homolog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:182,942,623...182,963,938
Ensembl chr 3:191,414,777...191,436,103 		JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:17460091) MGI PMID:17460091 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:193,913,712...193,934,123
Ensembl chr 3:203,856,374...203,876,537 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:17376969) MGI PMID:17376969 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378 		JBrowse link
G RELN reelin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095 		JBrowse link
G SLIT2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656 		JBrowse link
G SLIT3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) UniProt PMID:11748139 NCBI chr 5:164,029,432...164,664,156
Ensembl chr 5:170,793,731...171,425,242 		JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRG1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:22376909) MGI PMID:22376909 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977 		JBrowse link
G NRG3 neuregulin 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:78,267,693...79,384,895
Ensembl chr10:81,862,036...82,973,334 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr 3:27,261,155...27,373,223
Ensembl chr 3:27,591,639...27,670,815 		JBrowse link
commissural neuron differentiation in spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:10,453,708...10,488,391
Ensembl chr 1:11,670,651...11,700,012 		JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:23144223) MGI PMID:23144223 NCBI chr14:79,795,262...79,898,472 JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G TBR1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:23144223) MGI PMID:23144223 NCBI chr2B:48,709,687...48,719,382 JBrowse link
corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:120,479,534...120,523,563
Ensembl chr2B:239,392,990...239,436,766 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:22473424 RGD:10411906 NCBI chr12:2,166,672...2,817,827
Ensembl chr12:2,114,140...2,744,826 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CORO1C coronin 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:106,220,755...106,306,098
Ensembl chr12:109,617,093...109,674,368 		JBrowse link
G DCC DCC netrin 1 receptor ISO RGD PMID:22473424 RGD:10411906 NCBI chr18:45,717,924...46,913,998
Ensembl chr18:49,268,812...50,255,155 		JBrowse link
G DMXL2 Dmx like 2 acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr15:30,386,009...30,557,976
Ensembl chr15:48,719,150...48,890,708 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118 		JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,604,188...181,624,744
Ensembl chr 3:190,089,522...190,104,905 		JBrowse link
G FILIP1 filamin A interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:73,135,086...73,334,630
Ensembl chr 6:76,429,175...76,548,549 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:42,555,131...42,785,228
Ensembl chr15:60,848,493...61,017,244 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr12:5,027,333...5,037,136
Ensembl chr12:4,950,938...4,952,425 		JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:113,187,158...113,256,260
Ensembl chr 1:127,090,829...127,092,328 		JBrowse link
G KCNA3 potassium voltage-gated channel subfamily A member 3 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:113,304,340...113,323,367 JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:22473424 RGD:10411906 NCBI chr11:17,788,010...17,936,591
Ensembl chr11:17,472,158...17,517,892 		JBrowse link
G KCNC3 potassium voltage-gated channel subfamily C member 3 ISO RGD PMID:22473424 RGD:10411906 NCBI chr19:47,275,213...47,296,809 JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:112,860,887...112,884,687
Ensembl chr 1:127,458,968...127,480,182 		JBrowse link
G KIF21B kinesin family member 21B acts_upstream_of_or_within ISO (PMID:29078390) MGI PMID:29078390 NCBI chr 1:176,569,305...176,623,403
Ensembl chr 1:180,872,306...180,925,725 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr 9:82,013,960...82,179,227
Ensembl chr 9:110,179,600...110,279,038 		JBrowse link
G NSUN5 NOP2/Sun RNA methyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,455,353...80,461,316 JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G RTN4R reticulon 4 receptor involved_in ISO (PMID:27339102) UniProt PMID:27339102 Ensembl chr22:18,673,548...18,680,017 JBrowse link
G RTN4RL1 reticulon 4 receptor like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,923,928...2,015,415
Ensembl chr17:1,813,560...1,903,402 		JBrowse link
G RTN4RL2 reticulon 4 receptor like 2 involved_in ISO (PMID:27339102) UniProt PMID:27339102 NCBI chr11:52,701,378...52,718,385
Ensembl chr11:56,174,358...56,190,410 		JBrowse link
G RYK receptor like tyrosine kinase involved_in ISO (PMID:16723543) UniProt PMID:16723543 NCBI chr 3:131,174,507...131,296,815 JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 ISO RGD PMID:22473424 RGD:10411906 NCBI chr2B:52,514,918...52,667,225
Ensembl chr2B:169,928,323...170,027,509 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:24284070) MGI PMID:24284070 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
G WDR37 WD repeat domain 37 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:1,093,957...1,172,209
Ensembl chr10:1,140,562...1,217,263 		JBrowse link
G WDR47 WD repeat domain 47 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,347,559...111,419,866
Ensembl chr 1:110,512,347...110,584,155 		JBrowse link
G WDR89 WD repeat domain 89 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:44,170,527...44,220,090
Ensembl chr14:62,428,742...62,429,905 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 8:61,119,561...61,122,827 JBrowse link
G C10H12orf57 chromosome 10 C12orf57 homolog involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) UniProt PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chr12:7,073,251...7,075,408
Ensembl chr12:6,978,576...6,990,580 		JBrowse link
G NIN ninein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:31,308,388...31,420,045
Ensembl chr14:49,609,368...49,719,971 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PRDM8 PR/SET domain 8 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 4:43,993,635...44,014,430 JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:42,691,292...42,754,046
Ensembl chr 1:44,068,998...44,129,456 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:71,833,654...71,848,509
Ensembl chr11:75,492,912...75,493,973 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:25741725) MGI PMID:25741725 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCN1B sodium voltage-gated channel beta subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:31,974,499...31,984,488
Ensembl chr19:40,711,281...40,724,052 		JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656 		JBrowse link
corticospinal tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 8:61,119,561...61,122,827 JBrowse link
G CDH11 cadherin 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:45,261,269...45,436,597
Ensembl chr16:64,367,862...64,475,028 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790 		JBrowse link
G FBXO45 F-box protein 45 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:193,913,712...193,934,123
Ensembl chr 3:203,856,374...203,876,537 		JBrowse link
G NIN ninein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:31,308,388...31,420,045
Ensembl chr14:49,609,368...49,719,971 		JBrowse link
G PRDM8 PR/SET domain 8 acts_upstream_of_or_within ISO (PMID:22284184) MGI PMID:22284184 NCBI chr 4:43,993,635...44,014,430 JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:23,519,311...23,620,532
Ensembl chr15:41,688,081...41,788,616 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:25741725) MGI PMID:25741725 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
corticotropin hormone secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:9463347) MGI PMID:9463347 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAT1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:30,368,847...30,391,595
Ensembl chr 6:31,238,778...31,261,611 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:33450391 RGD:126781687 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G FBXO41 F-box protein 41 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:73,307,478...73,337,242
Ensembl chr2A:74,800,490...74,811,075 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:177,948,040...178,012,705 JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in ISO (PMID:21658585) UniProt PMID:21658585 NCBI chr17:7,622,855...7,646,340
Ensembl chr17:7,609,736...7,631,758 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:16464983) MGI PMID:16464983 Ensembl chr20:61,325,365...61,395,266 JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:18297065) MGI PMID:18297065 NCBI chr 5:128,112,636...128,154,443
Ensembl chr 5:134,274,352...134,315,431 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:21970971) MGI PMID:21970971 NCBI chr22:14,077,463...14,929,250 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G MEF2C myocyte enhancer factor 2C ISO RGD PMID:18949272 RGD:5131610 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:10804213)
(PMID:10398678), (PMID:10639171) 		MGI
UniProt		 PMID:10398678 PMID:10639171 PMID:10804213 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NEUROD6 neuronal differentiation 6 acts_upstream_of_or_within ISO (PMID:10804213) MGI PMID:10804213 NCBI chr 7:31,949,900...31,953,353 JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:6,824,377...6,832,971
Ensembl chr12:6,742,251...6,748,741 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:45,494,834...45,525,804
Ensembl chr 1:46,849,528...46,859,137 		JBrowse link
G POMT2 protein O-mannosyltransferase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:57,827,841...57,874,100
Ensembl chr14:77,029,625...77,075,806 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:17706614) CACAO PMID:17706614 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G RELN reelin ISO RGD PMID:15459104 RGD:2317799 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 acts_upstream_of_or_within ISO (PMID:16464983) MGI PMID:16464983 NCBI chr2B:52,514,918...52,667,225
Ensembl chr2B:169,928,323...170,027,509 		JBrowse link
G SCT secretin acts_upstream_of_or_within ISO (PMID:21159798) MGI PMID:21159798 NCBI chr11:632,073...634,296 JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:18297065) MGI PMID:18297065 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G TMEM108 transmembrane protein 108 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:130,105,824...130,468,122
Ensembl chr 3:137,775,339...137,944,660 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:95,659,443...96,525,316
Ensembl chr 8:97,860,720...98,698,271 		JBrowse link
diencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEMA5A semaphorin 5A involved_in ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr 5:9,349,473...9,852,183
Ensembl chr 5:9,168,549...9,564,356 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:18094027) MGI PMID:18094027 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
diencephalon morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:63,125,700...63,133,702
Ensembl chr2A:64,255,217...64,262,221 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
dorsal spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,374,565...39,488,843
Ensembl chr 6:40,684,695...40,799,395 		JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:10,453,708...10,488,391
Ensembl chr 1:11,670,651...11,700,012 		JBrowse link
G DRGX dorsal root ganglia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:44,845,622...44,880,512 JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362 		JBrowse link
G HOXB8 homeobox B8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:8,920,986...8,924,649
Ensembl chr17:9,106,662...9,109,540 		JBrowse link
G PBX3 PBX homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:96,867,140...97,089,205
Ensembl chr 9:125,379,489...125,598,178 		JBrowse link
G UNCX UNC homeobox acts_upstream_of_or_within ISO (PMID:10804168)
(PMID:10804169) 		MGI PMID:10804168 PMID:10804169 NCBI chr 7:1,479,804...1,485,041 JBrowse link
efferent axon development in a lateral line nerve term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725) MGI PMID:15677725 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:17409253) MGI PMID:17409253 NCBI chr 7:7,039,379...7,068,866 JBrowse link
establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:22049154 RGD:8657330 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238 		JBrowse link
G ADGRG6 adhesion G protein-coupled receptor G6 involved_in ISO (PMID:39087467) UniProt PMID:39087467 NCBI chr 6:140,069,168...140,211,011
Ensembl chr 6:144,142,374...144,283,545 		JBrowse link
G BPGM bisphosphoglycerate mutase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:126,605,151...126,637,934
Ensembl chr 7:139,123,318...139,144,487 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G FZD4 frizzled class receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:81,973,680...82,007,733
Ensembl chr11:85,611,989...85,616,065 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (PMID:25083995) MGI PMID:25083995 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:25083995) MGI PMID:25083995 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G LSR lipolysis stimulated lipoprotein receptor involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:32,195,036...32,214,300
Ensembl chr19:40,932,180...40,951,448 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
NOT|involved_in 		IEA
ISO 		(PMID:27008858) Ensembl
ARUK-UCL		 PMID:27008858 GO_REF:0000107 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:36,399,868...36,424,953
Ensembl chr  X:44,224,161...44,249,067 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,924,731...80,925,393 JBrowse link
G FOXP3 forkhead box P3 ISO RGD PMID:31027862 RGD:38549575 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
establishment of glial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMD dystrophin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:23,728,650...26,338,849
Ensembl chr  X:31,282,415...33,492,733 		JBrowse link
G MXRA8 matrix remodeling associated 8 involved_in ISO (PMID:14603461) UniProt PMID:14603461 NCBI chr 1:109,071...117,378 JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,808,318...182,064,583
Ensembl chr 1:186,092,113...186,346,019 		JBrowse link
facial nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor ISO RGD PMID:15356205 RGD:1580344 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
facial nerve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADARB1 adenosine deaminase RNA specific B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:31,374,841...31,532,721
Ensembl chr21:44,715,931...44,815,748 		JBrowse link
G PLXNA4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chr 7:124,097,028...124,621,504
Ensembl chr 7:136,643,657...136,992,405 		JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494 		JBrowse link
facial nerve structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:9806922) Ensembl
MGI		 PMID:9806922 GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
G NRP1 neuropilin 1 involved_in ISO (PMID:18356247), (PMID:18804103) ParkinsonsUK-UCL PMID:18356247 PMID:18804103 NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:92,911,721...93,027,032
Ensembl chr2B:211,042,324...211,157,547 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:143,900,029...143,915,391
Ensembl chr  X:153,772,700...153,786,167 		JBrowse link
G PLXNA4 plexin A4 involved_in ISO (PMID:18804103) ParkinsonsUK-UCL PMID:18804103 NCBI chr 7:124,097,028...124,621,504
Ensembl chr 7:136,643,657...136,992,405 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:18804103) ParkinsonsUK-UCL PMID:18804103 NCBI chr 7:75,929,699...76,484,246
Ensembl chr 7:89,590,359...90,004,122 		JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,083,733...50,117,518
Ensembl chr 3:51,318,089...51,351,958 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800) MGI PMID:8102800 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (PMID:20410112) UniProt PMID:20410112 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr 9:59,114,640...59,146,438
Ensembl chr 9:87,186,151...87,216,537 		JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:2,423,563...2,461,486
Ensembl chr16:3,600,370...3,637,622 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:18094027) MGI PMID:18094027 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
forebrain astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KRAS KRAS proto-oncogene, GTPase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:61,062,689...61,108,524
Ensembl chr12:63,679,293...63,724,335 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (PMID:8543156) MGI PMID:8543156 NCBI chr 6:96,677,651...96,682,145 JBrowse link
forebrain cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXL AXL receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase acts_upstream_of_or_within ISO (PMID:18787040) MGI PMID:18787040 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288 		JBrowse link
forebrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:96,224,515...96,311,246
Ensembl chr12:99,637,622...99,726,939 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:32,786,362...32,797,728
Ensembl chr19:41,534,569...41,545,906 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15385965)
(PMID:15689559) 		MGI PMID:15385965 PMID:15689559 NCBI chr11:124,881,191...124,944,472
Ensembl chr11:128,775,329...128,847,482 		JBrowse link
G APP amyloid beta precursor protein acts_upstream_of_or_within ISO (PMID:10200318)
(PMID:8001115)
(PMID:15385965) 		MGI PMID:8001115 PMID:10200318 PMID:15385965 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:43,850,692...43,994,487
Ensembl chr19:52,435,379...52,521,104 		JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239 		JBrowse link
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:12379852) MGI PMID:12379852 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G ATRX ATRX chromatin remodeler acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:66,682,968...66,969,421
Ensembl chr  X:76,795,574...77,083,486 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CCKAR cholecystokinin A receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:20,881,340...20,890,986
Ensembl chr 4:26,157,702...26,166,773 		JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO RGD PMID:16516309 RGD:4890442 NCBI chr 3:46,273,096...46,278,471
Ensembl chr 3:47,380,321...47,381,379 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CHRD chordin involved_in
acts_upstream_of_or_within 		ISO (PMID:12397106)
(PMID:10688202) 		MGI PMID:10688202 PMID:12397106 NCBI chr 3:181,417,140...181,460,236
Ensembl chr 3:189,898,856...189,908,573 		JBrowse link
G CNP 2'',3''-cyclic nucleotide 3'' phosphodiesterase ISO RGD PMID:16876328 RGD:6483359 NCBI chr17:15,338,085...15,349,089
Ensembl chr17:15,560,056...15,568,916 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DCLK1 doublecortin like kinase 1 acts_upstream_of_or_within ISO (PMID:16387639) MGI PMID:16387639 NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:17127040) MGI PMID:17127040 NCBI chr10:48,950,704...48,953,815
Ensembl chr10:51,084,027...51,089,776 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr 8:12,282,190...12,809,770
Ensembl chr 8:9,037,742...9,460,233 		JBrowse link
G DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 ISO RGD PMID:9878698 RGD:10059325 NCBI chr19:14,078,201...14,081,884
Ensembl chr19:14,922,389...14,926,268 		JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:10,453,708...10,488,391
Ensembl chr 1:11,670,651...11,700,012 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:17175142 RGD:2311572 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:98,051,788...98,425,676
Ensembl chr11:101,536,471...101,909,194 		JBrowse link
G E2F1 E2F transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604 		JBrowse link
G EMX2 empty spiracles homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FEZF2 FEZ family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:15708559) MGI PMID:15708559 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:18561326 RGD:11561932 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G FOXP2 forkhead box P2 ISO RGD PMID:12815709 RGD:11536004 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:66,992,207...67,107,313
Ensembl chr12:69,829,435...69,878,293 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:109,469,750...109,684,086
Ensembl chr 6:113,545,944...113,604,451 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GNAO1 G protein subunit alpha o1 ISO RGD PMID:8746812 RGD:2302010 NCBI chr16:36,473,852...36,643,789
Ensembl chr16:55,606,920...55,776,619 		JBrowse link
G GSC goosecoid homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:75,390,119...75,392,050
Ensembl chr14:94,718,269...94,720,404 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within 		IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:10804184), (PMID:11291863)
(PMID:15459110) 		MGI PMID:10804184 PMID:11291863 PMID:15459110 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9878698 RGD:10059325 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G HTRA2 HtrA serine peptidase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:74,596,020...74,599,790
Ensembl chr2A:76,102,240...76,106,152 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:28291836) MGI PMID:28291836 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:15841184), (PMID:16467156) MGI PMID:15841184 PMID:16467156 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G ITGAM integrin subunit alpha M involved_in ISO (PMID:18685038) ARUK-UCL PMID:18685038 NCBI chr16:23,634,476...23,707,147
Ensembl chr16:31,630,146...31,702,406 		JBrowse link
G KCNC4 potassium voltage-gated channel subfamily C member 4 ISO RGD PMID:22473424 RGD:10411906 NCBI chr 1:112,860,887...112,884,687
Ensembl chr 1:127,458,968...127,480,182 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:28291836) MGI PMID:28291836 NCBI chr 5:128,112,636...128,154,443
Ensembl chr 5:134,274,352...134,315,431 		JBrowse link
G LOC100990531 uncharacterized LOC100990531 acts_upstream_of_or_within ISO (PMID:14704420)
(PMID:12151532), (PMID:14566948), (PMID:7605629) 		MGI PMID:7605629 PMID:12151532 PMID:14566948 PMID:14704420 NCBI chr14:9,545,147...9,572,309 JBrowse link
G LRP2 LDL receptor related protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:56,407,871...56,640,471
Ensembl chr2B:173,873,767...174,103,697 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:327,995...392,691
Ensembl chr16:1,759,171...1,821,246 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chr 3:166,099,530...166,677,739
Ensembl chr 3:174,154,814...174,731,252 		JBrowse link
G MRTFA myocardin related transcription factor A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:21,314,829...21,536,673
Ensembl chr22:39,413,002...39,467,402 		JBrowse link
G MRTFB myocardin related transcription factor B acts_upstream_of_or_within ISO (PMID:20534669) MGI PMID:20534669 NCBI chr16:12,999,165...13,195,012
Ensembl chr16:14,493,351...14,613,860 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MYO1D myosin ID ISO RGD PMID:8034741 RGD:633383 NCBI chr17:23,900,814...24,283,721
Ensembl chr17:24,284,959...24,572,183 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NDE1 nudE neurodevelopment protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr16:15,948,881...16,027,986 JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:145,910,993...145,982,933
Ensembl chr 5:151,936,357...151,986,668 		JBrowse link
G NEUROG1 neurogenin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:130,922,727...130,924,403
Ensembl chr 5:137,064,339...137,065,052 		JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:15328020) MGI PMID:15328020 NCBI chr 4:105,002,447...105,005,704 JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr10:66,039,739...66,041,804
Ensembl chr10:68,571,614...68,572,258 		JBrowse link
G NFIB nuclear factor I B acts_upstream_of_or_within ISO (PMID:15632069) MGI PMID:15632069 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO (PMID:15494458) UniProt PMID:15494458
G NOG noggin involved_in ISO
IEA 		RGD
Ensembl		 PMID:14643011 GO_REF:0000107 RGD:1358324 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NOTCH3 notch receptor 3 acts_upstream_of_or_within ISO (PMID:16120638) MGI PMID:16120638 NCBI chr19:14,692,571...14,733,758
Ensembl chr19:15,678,674...15,715,080 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 acts_upstream_of_or_within ISO (PMID:15548577) MGI PMID:15548577 NCBI chr 5:21,773,283...21,785,746
Ensembl chr 5:21,910,463...21,918,776 		JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 acts_upstream_of_or_within ISO (PMID:15548577) MGI PMID:15548577 NCBI chr15:75,008,879...75,021,981 JBrowse link
G NUMB NUMB endocytic adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,854,280...54,046,410
Ensembl chr14:72,714,555...72,798,037 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:37,710,882...37,734,873
Ensembl chr19:46,217,935...46,238,103 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:22928023 RGD:9590181 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921 		JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:63,125,700...63,133,702
Ensembl chr2A:64,255,217...64,262,221 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:15917450)
(PMID:14625556)
(PMID:15201223) 		MGI PMID:14625556 PMID:15201223 PMID:15917450 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PCDH9 protocadherin 9 ISO RGD PMID:17614211 RGD:2316761 NCBI chr13:47,512,960...48,430,521
Ensembl chr13:66,310,212...67,222,134 		JBrowse link
G POU3F1 POU class 3 homeobox 1 acts_upstream_of_or_within ISO (PMID:19527706) MGI PMID:19527706 NCBI chr 1:37,317,800...37,320,004 JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:15148382) MGI PMID:15148382 NCBI chr 1:202,328,987...202,354,440
Ensembl chr 1:207,320,937...207,346,295 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (PMID:19007770) UniProt PMID:19007770 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RELN reelin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SEMA3A semaphorin 3A involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:75,929,699...76,484,246
Ensembl chr 7:89,590,359...90,004,122 		JBrowse link
G SEMA3D semaphorin 3D involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:76,964,151...77,155,472
Ensembl chr 7:90,624,398...90,750,389 		JBrowse link
G SEMA3E semaphorin 3E involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:75,329,049...75,612,946
Ensembl chr 7:88,995,049...89,274,241 		JBrowse link
G SEMA3G semaphorin 3G involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:52,375,215...52,387,115
Ensembl chr 3:53,603,867...53,615,739 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:20133625) MGI PMID:20133625 NCBI chr 3:46,916,615...47,064,046
Ensembl chr 3:48,018,517...48,163,999 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:16330018) MGI PMID:16330018 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15882093) MGI PMID:15882093 NCBI chr13:93,023,958...93,269,467 JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
G SOX3 SRY-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:14981518) MGI PMID:14981518 NCBI chr  X:129,654,296...129,656,446 JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768 		JBrowse link
G SSTR1 somatostatin receptor 1 ISO RGD PMID:10805921 RGD:2325003 NCBI chr14:18,968,969...18,973,560
Ensembl chr14:37,329,309...37,330,484 		JBrowse link
G SSTR2 somatostatin receptor 2 ISO RGD PMID:10805921 RGD:2325003 NCBI chr17:67,093,013...67,099,086
Ensembl chr17:72,553,506...72,554,615 		JBrowse link
G SSTR3 somatostatin receptor 3 ISO RGD PMID:10805921 RGD:2325003 NCBI chr22:18,116,993...18,125,170
Ensembl chr22:35,954,232...35,955,488 		JBrowse link
G SSTR4 somatostatin receptor 4 ISO RGD PMID:10805921 RGD:2325003 NCBI chr20:22,982,009...22,986,058
Ensembl chr20:23,333,320...23,334,766 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr 1:46,551,592...46,639,668
Ensembl chr 1:48,072,728...48,137,071 		JBrowse link
G TOP2B DNA topoisomerase II beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:25,499,239...25,566,029
Ensembl chr 3:25,828,879...25,896,912 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G TTBK2 tau tubulin kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:4,883,688...4,950,963
Ensembl chr18:7,164,091...7,229,271 		JBrowse link
G TYROBP transmembrane immune signaling adaptor TYROBP involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,821,279...32,825,488
Ensembl chr19:41,570,683...41,575,226 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:70,964,829...70,997,702
Ensembl chr2A:72,078,829...72,111,463 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 ISO RGD PMID:11731009 RGD:2325879 NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550 		JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:144,437,075...144,443,516
Ensembl chr 3:152,019,013...152,024,502 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:126,691,534...126,705,788
Ensembl chr  X:136,954,024...136,967,819 		JBrowse link
G ZIC5 Zic family member 5 acts_upstream_of_or_within ISO (PMID:15736266) MGI PMID:15736266 NCBI chr13:81,132,841...81,149,539 JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:10393115), (PMID:11163262), (PMID:11830575) MGI PMID:10393115 PMID:11163262 PMID:11830575
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:18791198) UniProt PMID:18791198 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
forebrain generation of neurons term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
forebrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GAK cyclin G associated kinase acts_upstream_of_or_within ISO (PMID:18434600) MGI PMID:18434600 NCBI chr 4:952,474...1,049,612
Ensembl chr 4:883,096...967,473 		JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:20,651,617...20,664,586 JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983) MGI PMID:19036983 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) BHF-UCL PMID:16675393 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880 		JBrowse link
forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPM assembly factor for spindle microtubules acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:172,674,890...172,737,426
Ensembl chr 1:176,988,297...177,050,810 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945)
(PMID:16920270) 		MGI PMID:14715945 PMID:16920270 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (PMID:10631167) MGI PMID:10631167 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
forebrain neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 ISO induction of dopaminergic neurons in the rostral forebrain RGD PMID:9630220 RGD:2289424 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:21048141) MGI PMID:21048141 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:15217369) MGI
TreeGrafter		 PMID:15217369 GO_REF:0000118 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378 		JBrowse link
G LHX8 LIM homeobox 8 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:15217369) MGI
TreeGrafter		 PMID:15217369 GO_REF:0000118 NCBI chr 1:74,356,372...74,383,984
Ensembl chr 1:76,324,804...76,357,879 		JBrowse link
G LOC100986730 guanine nucleotide-binding protein G(q) subunit alpha acts_upstream_of_or_within ISO (PMID:15340067) MGI PMID:15340067 NCBI chr 9:46,816,409...47,129,116
Ensembl chr 9:76,575,815...76,773,849 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:151,419,402...151,680,769
Ensembl chr 4:163,316,396...163,487,495 		JBrowse link
G SECISBP2 SECIS binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:60,408,272...60,456,945
Ensembl chr 9:88,454,531...88,498,095 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15882093) MGI PMID:15882093 NCBI chr13:93,023,958...93,269,467 JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:10803593) MGI PMID:10803593 NCBI chr 6:10,237,834...10,260,843 JBrowse link
forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 ISO RGD PMID:17936272 RGD:2314144 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:16543408) MGI PMID:16543408 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G LHX8 LIM homeobox 8 acts_upstream_of_or_within ISO (PMID:15978004) MGI PMID:15978004 NCBI chr 1:74,356,372...74,383,984
Ensembl chr 1:76,324,804...76,357,879 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:11163262) MGI PMID:11163262
G OTP orthopedia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:37,667,070...37,677,802
Ensembl chr 5:38,196,327...38,206,313 		JBrowse link
G PHLDA1 pleckstrin homology like domain family A member 1 ISO RGD PMID:10428057 RGD:70034 NCBI chr12:73,530,456...73,543,951
Ensembl chr12:76,387,313...76,388,502 		JBrowse link
G POU3F4 POU class 3 homeobox 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:72,563,887...72,568,233
Ensembl chr  X:82,666,757...82,667,842 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15882093) MGI PMID:15882093 NCBI chr13:93,023,958...93,269,467 JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15240551) MGI PMID:15240551 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:17678855) MGI PMID:17678855 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G LHX6 LIM homeobox 6 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674 NCBI chr 9:93,303,447...93,353,896
Ensembl chr 9:121,670,707...121,694,378 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18339674) MGI PMID:18339674
G SMARCC2 SWI/SNF related BAF chromatin remodeling complex subunit C2 acts_upstream_of_or_within ISO (PMID:23643363) MGI PMID:23643363 NCBI chr12:32,726,150...32,753,366
Ensembl chr12:32,977,879...33,004,144 		JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:52,966,907...52,981,024
Ensembl chr20:54,255,489...54,265,432 		JBrowse link
forebrain radial glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28965759) UniProt PMID:28965759 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:27965439) MGI PMID:27965439 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G RHOA ras homolog family member A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:49,282,009...49,339,887 JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:84,076,945...84,166,385
Ensembl chr2B:201,983,321...202,064,467 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G WNT2B Wnt family member 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,119,360...115,177,942
Ensembl chr 1:125,173,906...125,230,675 		JBrowse link
G WNT7B Wnt family member 7B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:44,988,647...45,044,841 JBrowse link
forebrain ventricular zone progenitor cell division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:106,813,905...106,908,898
Ensembl chr11:110,657,803...110,753,114 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (PMID:12130536) MGI PMID:12130536 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G POU3F3 POU class 3 homeobox 3 acts_upstream_of_or_within ISO (PMID:12130536) MGI PMID:12130536 NCBI chr2A:96,967,943...96,972,378 JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ARF like GTPase 13B involved_in ISO (PMID:23817546) UniProt PMID:23817546 NCBI chr 3:91,044,332...91,121,686
Ensembl chr 3:97,725,136...97,799,932 		JBrowse link
G FLNA filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:143,799,088...143,825,282 JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of_or_within ISO (PMID:21185282) MGI PMID:21185282 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
globus pallidus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:17460091) MGI PMID:17460091 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:10482766 RGD:9685780 NCBI chr11:17,788,010...17,936,591
Ensembl chr11:17,472,158...17,517,892 		JBrowse link
G KCNC2 potassium voltage-gated channel subfamily C member 2 ISO RGD PMID:10482766 RGD:9685780 NCBI chr12:72,566,924...72,736,270 JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:11854319)
(PMID:20181579) 		UniProt
MGI		 PMID:11854319 PMID:20181579
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NDNF neuron derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:113,242,800...113,283,834
Ensembl chr 4:124,386,606...124,422,793 		JBrowse link
G NRP1 neuropilin 1 involved_in ISO (PMID:21059704) BHF-UCL PMID:21059704 NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:92,911,721...93,027,032
Ensembl chr2B:211,042,324...211,157,547 		JBrowse link
G PLXNA1 plexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:124,026,069...124,080,241
Ensembl chr 3:131,340,584...131,393,561 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,900,029...143,915,391
Ensembl chr  X:153,772,700...153,786,167 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:21059704) BHF-UCL PMID:21059704 NCBI chr 7:75,929,699...76,484,246
Ensembl chr 7:89,590,359...90,004,122 		JBrowse link
G SEMA3E semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,329,049...75,612,946
Ensembl chr 7:88,995,049...89,274,241 		JBrowse link
habenula development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:19906978) MGI PMID:19906978 NCBI chr13:59,821,614...59,829,671 JBrowse link
hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in ISO (PMID:10079236) BHF-UCL PMID:10079236 NCBI chr 6:55,302,721...55,425,248
Ensembl chr 6:56,936,850...57,059,519 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (PMID:15607945) MGI PMID:15607945 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within ISO (PMID:15607945) MGI PMID:15607945 NCBI chr 7:147,058,349...147,065,038 JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:15829521), (PMID:16651541) MGI PMID:15829521 PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:15367676) MGI PMID:15367676 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:16368089) MGI PMID:16368089 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr10:66,039,739...66,041,804
Ensembl chr10:68,571,614...68,572,258 		JBrowse link
G NFIB nuclear factor I B acts_upstream_of_or_within ISO (PMID:15632069) MGI PMID:15632069 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11880342 PMID:20082710 RGD:729590 RGD:8552345 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISO (PMID:11318877) UniProt PMID:11318877 NCBI chr10:23,356,165...23,359,579 JBrowse link
G PTN pleiotrophin ISO RGD PMID:9749725 RGD:9831452 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMAD1 SMAD family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:137,822,269...137,899,700
Ensembl chr 4:149,481,836...149,558,135 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:15899870) MGI PMID:15899870 NCBI chr13:18,055,427...18,130,571
Ensembl chr13:36,486,597...36,521,646 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:16330018) MGI PMID:16330018 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G TBR1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:16540585) MGI PMID:16540585 NCBI chr2B:48,709,687...48,719,382 JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11231055 RGD:2302116 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr 1:67,336,009...67,470,265
Ensembl chr 1:69,318,742...69,425,652 		JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr 8:12,282,190...12,809,770
Ensembl chr 8:9,037,742...9,460,233 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 1:5,008,155...5,012,868
Ensembl chr 1:6,265,738...6,266,937 		JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB1 EPH receptor B1 ISO RGD PMID:28276447 RGD:127285619 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802 		JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:28276447 RGD:127285619 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118 		JBrowse link
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
hippocampal interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LYPD6 LY6/PLAUR domain containing 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:10,392,962...10,536,125
Ensembl chr2B:153,792,413...153,828,297 		JBrowse link
hippocampal pyramidal neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:15608631) MGI PMID:15608631 Ensembl chr20:61,325,365...61,395,266 JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr2B:44,785,808...44,883,977
Ensembl chr2B:162,034,161...162,124,151 		JBrowse link
G AKAP5 A-kinase anchoring protein 5 ISO RGD PMID:19535604 RGD:2313144 NCBI chr14:45,045,476...45,050,946
Ensembl chr14:63,302,200...63,303,483 		JBrowse link
G ALK ALK receptor tyrosine kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:29,196,195...29,930,062
Ensembl chr2A:29,276,041...30,006,735 		JBrowse link
G ANXA3 annexin A3 ISO RGD PMID:18493952 RGD:2302825 NCBI chr 4:45,585,873...45,644,783
Ensembl chr 4:51,432,846...51,491,677 		JBrowse link
G ATG16L1 autophagy related 16 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:120,479,534...120,523,563
Ensembl chr2B:239,392,990...239,436,766 		JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:16200642 RGD:6906893 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G BCAN brevican acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:131,985,310...132,003,068
Ensembl chr 1:135,808,783...135,826,344 		JBrowse link
G CASP3 caspase 3 ISO RGD PMID:18459132 RGD:2293317 NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr2B:106,217,926...106,220,444 JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:27073215 RGD:11568695 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806 		JBrowse link
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit part_of ISO RGD PMID:17046198 RGD:152995358 NCBI chr 8:26,729,767...26,749,277
Ensembl chr 8:23,932,846...23,952,377 		JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit ISO RGD PMID:15558717 RGD:150530459 NCBI chr15:57,493,730...57,530,463
Ensembl chr15:76,455,165...76,486,376 		JBrowse link
G CRK CRK proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:1,406,335...1,438,587
Ensembl chr17:1,306,509...1,336,569 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:3,141,147...3,177,448
Ensembl chr22:19,632,359...19,668,858 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr10:99,431,762...99,439,619
Ensembl chr10:102,896,376...102,901,514 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:21047951 RGD:4145527 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DCLK2 doublecortin like kinase 2 acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr 4:142,412,945...142,590,129
Ensembl chr 4:154,064,018...154,239,156 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) MGI PMID:17360497 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta ISO RGD PMID:12850562 RGD:11041879 NCBI chr14:55,554,516...55,561,201
Ensembl chr14:74,399,056...74,405,770 		JBrowse link
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma ISO RGD PMID:12850562 RGD:11041879 NCBI chr 1:44,154,600...44,290,407
Ensembl chr 1:45,525,137...45,650,259 		JBrowse link
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta ISO RGD PMID:12850562 RGD:11041879 NCBI chr2A:27,368,189...27,374,265
Ensembl chr2A:27,456,457...27,462,706 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon ISO RGD PMID:12850562 RGD:11041879 NCBI chr 3:181,170,806...181,180,923
Ensembl chr 3:189,652,554...189,665,528 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G EPHA5 EPH receptor A5 involved_in ISO (PMID:12124402) UniProt PMID:12124402 NCBI chr 4:58,392,771...58,743,604 JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO RGD PMID:23932971 RGD:9587811 NCBI chr17:14,572,868...14,618,012
Ensembl chr17:14,814,054...14,842,295 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23932971 RGD:9587811 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FBXO41 F-box protein 41 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:73,307,478...73,337,242
Ensembl chr2A:74,800,490...74,811,075 		JBrowse link
G FEZ1 fasciculation and elongation protein zeta 1 ISO RGD PMID:14992819 RGD:13208825 NCBI chr11:120,272,187...120,322,600
Ensembl chr11:124,182,901...124,236,403 		JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (PMID:22726441) UniProt PMID:22726441 NCBI chr  X:127,764,648...128,353,928
Ensembl chr  X:138,023,016...138,103,217 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19535712 RGD:2325978 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19535712 RGD:2325978 NCBI chr12:13,543,104...13,987,437
Ensembl chr12:13,969,387...14,388,799 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
G HDAC1 histone deacetylase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (PMID:19380719) MGI PMID:19380719 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
G HSD17B3 hydroxysteroid 17-beta dehydrogenase 3 ISO RGD PMID:21047951 RGD:4145527 NCBI chr 9:67,327,047...67,411,754
Ensembl chr 9:95,451,031...95,522,739 		JBrowse link
G HSD3B2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 ISO RGD PMID:21047951 RGD:4145527 NCBI chr 1:83,130,065...83,156,996
Ensembl chr 1:118,128,493...118,153,124 		JBrowse link
G HTR5A 5-hydroxytryptamine receptor 5A ISO RGD PMID:16572590 RGD:2316993 NCBI chr 7:146,672,908...146,690,001
Ensembl chr 7:158,399,874...158,416,922 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:15469968) MGI PMID:15469968 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:22042446 RGD:10403040 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974 		JBrowse link
G INSR insulin receptor ISO RGD PMID:22042446 RGD:10403040 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,027,333...5,037,136
Ensembl chr12:4,950,938...4,952,425 		JBrowse link
G KCNQ2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:15608631) MGI PMID:15608631 Ensembl chr20:61,325,365...61,395,266 JBrowse link
G KDM6B lysine demethylase 6B ISO RGD PMID:23932971 RGD:9587811 NCBI chr17:7,878,783...7,889,372
Ensembl chr17:7,866,973...7,874,937 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr12:31,340,201...31,376,849
Ensembl chr12:31,599,376...31,635,327 		JBrowse link
G KIF5B kinesin family member 5B ISO RGD PMID:9349526 RGD:12792964 NCBI chr10:32,138,964...32,186,448
Ensembl chr10:32,731,150...32,778,242 		JBrowse link
G KIRREL3 kirre like nephrin family adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:121,236,962...121,821,806
Ensembl chr11:125,146,563...125,723,504 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G LOC100985156 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 ISO RGD PMID:21047951 RGD:4145527 NCBI chr10:38,424,713...38,447,193
Ensembl chr 1:142,001,162...142,022,865 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G LRP8 LDL receptor related protein 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:52,515,534...52,600,390
Ensembl chr 1:54,114,909...54,199,452 		JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1521325 RGD:2316795 NCBI chr 6:157,774,098...157,799,983
Ensembl chr 6:162,801,416...162,802,393 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:14751287 RGD:12743658 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G MME membrane metalloendopeptidase acts_upstream_of_or_within ISO (PMID:25991605) MGI PMID:25991605 NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:22085911 RGD:5688137 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NEFH neurofilament heavy chain ISO RGD PMID:14620872 RGD:9743946 NCBI chr22:10,525,738...10,536,788 JBrowse link
G NEFL neurofilament light chain ISO RGD PMID:14620872 RGD:9743946 NCBI chr 8:24,218,510...24,224,627
Ensembl chr 8:21,134,533...21,140,694 		JBrowse link
G NEFM neurofilament medium chain ISO RGD PMID:14620872 RGD:9743946 NCBI chr 8:24,181,335...24,186,701
Ensembl chr 8:21,098,005...21,107,468 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:10,648,022...10,738,167
Ensembl chr22:28,454,119...28,544,013 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394), (PMID:23042739), (PMID:23776487), (PMID:23964093) MGI PMID:18477394 PMID:23042739 PMID:23776487 PMID:23964093 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:11163262) MGI PMID:11163262
G NME1 NME/NM23 nucleoside diphosphate kinase 1 ISO RGD PMID:18493952 RGD:2302825 NCBI chr17:45,243,588...45,252,135
Ensembl chr17:50,113,622...50,131,636 		JBrowse link
G NOG noggin ISO RGD PMID:15171992 RGD:10416525 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:15456880) MGI PMID:15456880 NCBI chr 9:70,907,056...70,950,221 JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:18493952 RGD:2302825 NCBI chr12:115,716,953...115,726,412
Ensembl chr12:119,093,952...119,105,054 		JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:20819118 RGD:8693633 NCBI chr18:56,084,851...56,338,551 JBrowse link
G PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20819118 RGD:8693633 NCBI chr16:53,287,549...53,366,113
Ensembl chr16:71,481,605...71,562,793 		JBrowse link
G PLXNA3 plexin A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:143,900,029...143,915,391
Ensembl chr  X:153,772,700...153,786,167 		JBrowse link
G PPP1R9B protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:21123436 RGD:10043818 NCBI chr17:44,224,007...44,240,906
Ensembl chr17:49,098,089...49,126,932 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:10906718 RGD:9589828 NCBI chr 7:113,882,557...114,073,283
Ensembl chr 7:126,569,630...126,758,155 		JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:18493952 RGD:2302825 NCBI chr12:128,497,407...128,503,049
Ensembl chr12:132,694,498...132,699,668 		JBrowse link
G RARA retinoic acid receptor alpha ISO RGD PMID:18619947 RGD:8693612 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SCT secretin involved_in ISO (PMID:18534766) UniProt PMID:18534766 NCBI chr11:632,073...634,296 JBrowse link
G SEMA6B semaphorin 6B involved_in ISO (PMID:20484647) UniProt PMID:20484647 NCBI chr19:3,562,673...3,600,981 JBrowse link
G SLC17A6 solute carrier family 17 member 6 ISO RGD PMID:18502731 RGD:9999204 NCBI chr11:22,350,537...22,392,009
Ensembl chr11:22,258,011...22,301,944 		JBrowse link
G SLC32A1 solute carrier family 32 member 1 ISO RGD PMID:18502731 RGD:9999204 NCBI chr20:35,049,115...35,054,347
Ensembl chr20:36,157,265...36,162,426 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
G SRD5A2 steroid 5 alpha-reductase 2 ISO RGD PMID:21047951 RGD:4145527 NCBI chr2A:31,542,646...31,597,394
Ensembl chr2A:31,610,487...31,665,718 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768 		JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:24074826 RGD:9684936 NCBI chr 5:35,622,645...35,696,451
Ensembl chr 5:35,893,841...35,966,932 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:104,007,708...104,060,938
Ensembl chr 9:132,638,003...132,675,759 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:71,833,654...71,848,509
Ensembl chr11:75,492,912...75,493,973 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
G XRN2 5'-3' exoribonuclease 2 ISO RGD PMID:23933240 RGD:9684963 NCBI chr20:21,260,871...21,347,430
Ensembl chr20:21,222,138...21,308,561 		JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon acts_upstream_of_or_within ISO (PMID:12796778) MGI PMID:12796778 NCBI chr17:1,332,004...1,387,120
Ensembl chr17:1,229,080...1,285,470 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 1:219,660,496...219,669,134
Ensembl chr 1:225,042,281...225,050,259 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:17644613) MGI PMID:17644613 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:144,437,075...144,443,516
Ensembl chr 3:152,019,013...152,024,502 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:126,691,534...126,705,788
Ensembl chr  X:136,954,024...136,967,819 		JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
hypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:16678101) MGI PMID:16678101 NCBI chr 5:173,086,726...173,090,461 JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within ISO (PMID:15037319) MGI PMID:15037319 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
hypothalamus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAP1 huntingtin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,578,658...15,596,313
Ensembl chr17:15,797,949...15,810,299 		JBrowse link
G OTP orthopedia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:37,667,070...37,677,802
Ensembl chr 5:38,196,327...38,206,313 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (PMID:8543156) MGI PMID:8543156 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G PRDM13 PR/SET domain 13 involved_in ISO (PMID:34730112) UniProt PMID:34730112 NCBI chr 6:97,447,729...97,456,541
Ensembl chr 6:101,329,818...101,337,368 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:9067988) MGI PMID:9067988 NCBI chr 5:173,086,726...173,090,461 JBrowse link
hypothalamus cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:103,112,624...103,137,356 JBrowse link
hypothalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316 		JBrowse link
G CRH corticotropin releasing hormone ISO RGD PMID:20002962 RGD:5130950 NCBI chr 8:62,714,721...62,716,979
Ensembl chr 8:64,383,419...64,384,009 		JBrowse link
G CRHR1 corticotropin releasing hormone receptor 1 ISO RGD PMID:20002962 RGD:5130950 NCBI chr17:11,261,435...11,313,630
Ensembl chr17:11,650,057...11,701,208 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:20002962 RGD:5130950 NCBI chr 7:31,265,619...31,313,902
Ensembl chr 7:31,386,026...31,434,220 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:15804399 RGD:4891928 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:12960049 RGD:1582276 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:8946059 RGD:2313681 NCBI chr11:123,272,111...123,400,413
Ensembl chr11:127,174,721...127,288,673 		JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:9,082,674...9,085,014
Ensembl chr13:27,427,569...27,428,876 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:23291449 RGD:7207858 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:12551846 RGD:5688241 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO (PMID:32868762) MGI PMID:32868762
G NKX2-6 NK2 homeobox 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,949,843...22,955,391
Ensembl chr 8:19,884,480...19,888,643 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:24,692,363...24,810,685
Ensembl chr2B:139,125,375...139,242,721 		JBrowse link
G RAX retina and anterior neural fold homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:52,664,243...52,669,177
Ensembl chr18:55,990,984...55,995,469 		JBrowse link
G RELN reelin ISO RGD PMID:10436054 RGD:634730 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SOX3 SRY-box transcription factor 3 involved_in ISO (PMID:14981518) UniProt PMID:14981518 NCBI chr  X:129,654,296...129,656,446 JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 PMID:15804399 RGD:4891928 RGD:4892048 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
G SRD5A2 steroid 5 alpha-reductase 2 ISO RGD PMID:15804399 RGD:4891928 NCBI chr2A:31,542,646...31,597,394
Ensembl chr2A:31,610,487...31,665,718 		JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 acts_upstream_of_or_within_positive_effect IEA Ensembl GO_REF:0000107 NCBI chr 1:86,719,650...86,727,607
Ensembl chr 1:121,774,940...121,775,347 		JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (PMID:18299572) MGI PMID:18299572 NCBI chr17:35,286,699...35,288,429 JBrowse link
inferior colliculus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G TFAP2D transcription factor AP-2 delta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:50,274,808...50,332,788
Ensembl chr 6:51,531,757...51,590,888 		JBrowse link
interkinetic nuclear migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP120 centrosomal protein 120 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:118,736,158...118,815,194
Ensembl chr 5:124,514,996...124,593,259 		JBrowse link
G DOCK7 dedicator of cytokinesis 7 involved_in ISO (PMID:22842144) UniProt PMID:22842144 NCBI chr 1:61,713,217...61,946,371
Ensembl chr 1:63,529,227...63,740,970 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:16364283) MGI PMID:16364283 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992 		JBrowse link
G HOOK3 hook microtubule tethering protein 3 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20152126) Ensembl
MGI		 PMID:20152126 GO_REF:0000107 NCBI chr 8:42,145,427...42,278,727
Ensembl chr 8:39,595,762...39,711,043 		JBrowse link
G KIF1A kinesin family member 1A ISO RGD PMID:21037580 RGD:13204706 NCBI chr2B:127,969,494...128,078,282
Ensembl chr2B:246,778,679...246,860,326 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:17825043 RGD:8552353 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PCM1 pericentriolar material 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20152126) Ensembl
MGI		 PMID:20152126 GO_REF:0000107 NCBI chr 8:17,140,458...17,246,165
Ensembl chr 8:14,093,988...14,199,691 		JBrowse link
G TACC1 transforming acidic coiled-coil containing protein 1 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chr 8:38,029,394...38,154,189
Ensembl chr 8:35,219,219...35,329,134 		JBrowse link
G TACC2 transforming acidic coiled-coil containing protein 2 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chr10:118,564,005...118,826,292
Ensembl chr10:121,976,980...122,237,505 		JBrowse link
G TACC3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:17920017) MGI PMID:17920017 NCBI chr 4:1,858,595...1,882,727
Ensembl chr 4:1,772,836...1,796,019 		JBrowse link
interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ARF like GTPase 13B involved_in ISO (PMID:23153492) UniProt PMID:23153492 NCBI chr 3:91,044,332...91,121,686
Ensembl chr 3:97,725,136...97,799,932 		JBrowse link
lateral ganglionic eminence cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
lateral geniculate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:12097474) MGI PMID:12097474 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361 		JBrowse link
lateral ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141 		JBrowse link
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,681,831...7,688,710
Ensembl chr17:7,669,626...7,673,834 		JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein acts_upstream_of_or_within ISO (PMID:17150371) MGI PMID:17150371 NCBI chr2B:6,309,048...6,314,660
Ensembl chr2B:119,887,728...119,892,986 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:13,989,114...14,316,855
Ensembl chr 5:13,851,391...14,093,358 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,190,415...98,212,857
Ensembl chr10:101,663,384...101,684,812 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within 		ISO (PMID:25960350)
(PMID:29452604) 		MGI PMID:25960350 PMID:29452604 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,854,280...54,046,410
Ensembl chr14:72,714,555...72,798,037 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,710,882...37,734,873
Ensembl chr19:46,217,935...46,238,103 		JBrowse link
G PAX5 paired box 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:36,677,369...36,876,678
Ensembl chr 9:37,474,267...37,673,684 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:71,833,654...71,848,509
Ensembl chr11:75,492,912...75,493,973 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880 		JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,896,177...37,942,040
Ensembl chr16:57,036,425...57,074,221 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr2B:106,217,926...106,220,444 JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) MGI PMID:22235340 NCBI chr2B:76,285,115...76,322,703
Ensembl chr2B:194,204,613...194,242,956 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G LRP8 LDL receptor related protein 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:52,515,534...52,600,390
Ensembl chr 1:54,114,909...54,199,452 		JBrowse link
G MBOAT7 membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:51,107,197...51,121,968
Ensembl chr19:59,949,428...59,963,312 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20847152) Ensembl
MGI		 PMID:20847152 GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr17:18,867,241...18,921,792
Ensembl chr17:19,193,860...19,236,427 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) MGI PMID:34235142 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
limbic system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within ISO (PMID:21068058)
(PMID:9115735) 		MGI PMID:9115735 PMID:21068058 NCBI chr11:67,317,747...67,322,850 JBrowse link
mammillary axonal complex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:25741725) MGI PMID:25741725 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
mammillary body development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
mammillothalamic axonal tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
medial motor column neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G LHX4 LIM homeobox 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:155,716,853...155,765,419
Ensembl chr 1:159,390,105...159,438,802 		JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197 		JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:63,125,700...63,133,702
Ensembl chr2A:64,255,217...64,262,221 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
microglia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:33450391 RGD:126781687 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G ITGAM integrin subunit alpha M acts_upstream_of_or_within ISO (PMID:20578039) MGI PMID:20578039 NCBI chr16:23,634,476...23,707,147
Ensembl chr16:31,630,146...31,702,406 		JBrowse link
G NRROS negative regulator of reactive oxygen species involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:193,984,797...194,007,173
Ensembl chr 3:203,920,334...203,948,506 		JBrowse link
G TLR2 toll like receptor 2 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331 		JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:87,472,017...87,511,719
Ensembl chr 1:122,520,308...122,561,850 		JBrowse link
microglia differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:177,640,127...177,705,885
Ensembl chr 3:185,813,245...185,878,362 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23717624) MGI PMID:23717624 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:120,087,477...120,137,550
Ensembl chr 4:131,391,361...131,439,590 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:36,399,868...36,424,953
Ensembl chr  X:44,224,161...44,249,067 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:33378678) UniProt PMID:33378678 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711 		JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:47,424,921...47,668,150
Ensembl chr 9:76,032,286...76,269,636 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:63,959,930...64,087,102
Ensembl chr2A:65,086,374...65,176,634 		JBrowse link
midbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr2B:44,785,808...44,883,977
Ensembl chr2B:162,034,161...162,124,151 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15689559) MGI PMID:15689559 NCBI chr11:124,881,191...124,944,472
Ensembl chr11:128,775,329...128,847,482 		JBrowse link
G BARHL1 BarH like homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:103,698,024...103,709,834
Ensembl chr 9:132,331,770...132,338,661 		JBrowse link
G CMA1 chymase 1 ISO RGD PMID:21396433 RGD:5128663 NCBI chr14:5,277,269...5,280,335
Ensembl chr14:23,400,345...23,403,548 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 ISO RGD PMID:18436867 RGD:4892032 NCBI chr 4:50,357,643...50,359,822
Ensembl chr 4:56,189,961...56,192,402 		JBrowse link
G CXCR2 C-X-C motif chemokine receptor 2 ISO RGD PMID:18436867 RGD:4892032 NCBI chr2B:105,387,198...105,400,533
Ensembl chr2B:223,997,066...223,998,148 		JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:74,311,249...74,447,312
Ensembl chr10:76,972,573...77,110,115 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:15175251), (PMID:15607945)
(PMID:8848044) 		MGI
ParkinsonsUK-UCL		 PMID:8848044 PMID:15175251 PMID:15607945 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within ISO (PMID:15175251), (PMID:15607945) MGI PMID:15175251 PMID:15607945 NCBI chr 7:147,058,349...147,065,038 JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:17687036) MGI PMID:17687036 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115 		JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363 		JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:20,651,617...20,664,586 JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 1:5,008,155...5,012,868
Ensembl chr 1:6,265,738...6,266,937 		JBrowse link
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:21752929) MGI PMID:21752929 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:11029008) MGI
UniProt		 PMID:11029008 GO_REF:0000117 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:145,910,993...145,982,933
Ensembl chr 5:151,936,357...151,986,668 		JBrowse link
G OTX1 orthodenticle homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:63,125,700...63,133,702
Ensembl chr2A:64,255,217...64,262,221 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:15888661)
(PMID:15201223)
(PMID:15201224), (PMID:20816794) 		MGI PMID:15201223 PMID:15201224 PMID:15888661 PMID:20816794 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within ISO (PMID:21752929) MGI PMID:21752929 NCBI chr11:67,317,747...67,322,850 JBrowse link
G PITX3 paired like homeodomain 3 acts_upstream_of_or_within
involved_in 		ISO (PMID:14973278), (PMID:17919745)
(PMID:15950611) 		MGI
UniProt		 PMID:14973278 PMID:15950611 PMID:17919745 NCBI chr10:98,833,330...98,846,292 JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMAD1 SMAD family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:137,822,269...137,899,700
Ensembl chr 4:149,481,836...149,558,135 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:15899870) MGI PMID:15899870 NCBI chr13:18,055,427...18,130,571
Ensembl chr13:36,486,597...36,521,646 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,630,137...60,729,904
Ensembl chr  X:70,684,217...70,782,323 		JBrowse link
G TAL2 TAL bHLH transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 9:104,947,724...104,948,050 JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,471,501...168,519,366
Ensembl chr 1:172,764,606...172,811,880 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr 1:67,336,009...67,470,265
Ensembl chr 1:69,318,742...69,425,652 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:2205396) Ensembl
MGI		 PMID:2205396 GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
G WNT5A Wnt family member 5A involved_in ISO (PMID:23324743)
(PMID:14557550) 		CACAO
ParkinsonsUK-UCL		 PMID:14557550 PMID:23324743 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSNK1D casein kinase 1 delta involved_in ISO (PMID:17244647) ParkinsonsUK-UCL PMID:17244647 NCBI chr17:76,648,677...76,683,054
Ensembl chr17:82,462,467...82,494,348 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in ISO (PMID:18953410), (PMID:23109420) ParkinsonsUK-UCL PMID:18953410 PMID:23109420 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RYK receptor like tyrosine kinase involved_in ISO (PMID:23517308) ParkinsonsUK-UCL PMID:23517308 NCBI chr 3:131,174,507...131,296,815 JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G WNT2 Wnt family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:109,244,772...109,291,472
Ensembl chr 7:121,936,031...121,985,862 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,685,160...10,741,402
Ensembl chr17:10,862,310...10,918,865 		JBrowse link
G WNT5A Wnt family member 5A involved_in ISO (PMID:23324743)
(PMID:14557550), (PMID:15748172), (PMID:23517308)
(PMID:18953410) 		ParkinsonsUK-UCL PMID:14557550 PMID:15748172 PMID:18953410 PMID:23324743 PMID:23517308 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
G WNT9B Wnt family member 9B involved_in ISO (PMID:25640183) ParkinsonsUK-UCL PMID:25640183 NCBI chr17:10,616,957...10,651,954 JBrowse link
midbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD3 frizzled class receptor 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115 		JBrowse link
G FZD6 frizzled class receptor 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:39,019,046...39,162,248
Ensembl chr2A:39,773,760...39,911,961 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (PMID:15607945) MGI PMID:15607945 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008), (PMID:19795512) MGI PMID:11029008 PMID:19795512 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSBP3 single stranded DNA binding protein 3 involved_in ISO (PMID:15857913) UniProt PMID:15857913 NCBI chr 1:53,501,656...53,680,682
Ensembl chr 1:55,094,820...55,272,207 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11522634) MGI PMID:11522634 NCBI chr 1:5,008,155...5,012,868
Ensembl chr 1:6,265,738...6,266,937 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091 		JBrowse link
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:33,154,530...33,168,427
Ensembl chr12:33,879,180...33,893,252 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:138,969,157...138,972,730
Ensembl chr 4:150,626,392...150,629,961 		JBrowse link
negative regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,640,225...10,683,728
Ensembl chr19:11,357,311...11,396,791 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578 		JBrowse link
negative regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 ISO RGD PMID:15829641 RGD:2302988 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DLL3 delta like canonical Notch ligand 3 ISO RGD PMID:16144902 RGD:1599776 NCBI chr19:36,597,420...36,607,021 JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:177,720,832...177,731,551
Ensembl chr 1:182,022,600...182,028,623 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO (PMID:12666205) UniProt PMID:12666205 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:18640244) MGI PMID:18640244 NCBI chr12:22,954,946...23,096,623 JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:15882580) MGI PMID:15882580 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G KDM4A lysine demethylase 4A ISO RGD PMID:24747049 RGD:9587433 NCBI chr 1:42,949,977...43,005,684
Ensembl chr 1:44,325,624...44,380,163 		JBrowse link
G MBD1 methyl-CpG binding domain protein 1 ISO RGD PMID:16881068 RGD:9588644 NCBI chr18:43,647,395...43,662,266
Ensembl chr18:46,996,905...47,009,831 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:16881068 RGD:9588644 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:18640244) MGI PMID:18640244 NCBI chr2A:15,925,130...15,931,605 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NOG noggin involved_in ISO
IEA 		RGD
Ensembl		 PMID:14975730 GO_REF:0000107 RGD:1358325 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:12075995 RGD:2325633 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204 		JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMERB1 bMERB domain containing 1 acts_upstream_of_or_within ISO (PMID:25099998) MGI PMID:25099998 Ensembl chr16:15,737,850...15,892,145 JBrowse link
negative regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT5A Wnt family member 5A involved_in ISO (PMID:18953410) ParkinsonsUK-UCL PMID:18953410 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:20153830) MGI PMID:20153830 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18573488 RGD:4889489 NCBI chr17:26,546,177...26,572,301
Ensembl chr17:27,050,900...27,092,882 		JBrowse link
negative regulation of establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRPV1 transient receptor potential cation channel subfamily V member 1 ISO RGD PMID:16056236 RGD:2317116 NCBI chr17:3,612,781...3,658,608
Ensembl chr17:3,609,952...3,637,579 		JBrowse link
G TTPA alpha tocopherol transfer protein involved_in ISO (PMID:19923370) BHF-UCL PMID:19923370 NCBI chr 8:59,591,592...59,619,658
Ensembl chr 8:61,266,954...61,293,699 		JBrowse link
negative regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within 		ISO
IEA 		PMID:11399758 UniProt
Ensembl		 PMID:11399758 GO_REF:0000107 RGD:8554692 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISO PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:19555672 RGD:10043320 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063 		JBrowse link
negative regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:16388796 PMID:22710965 RGD:2289009 RGD:9068402 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:39,374,565...39,488,843
Ensembl chr 6:40,684,695...40,799,395 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of_or_within ISO (PMID:9651217) MGI PMID:9651217 NCBI chr 3:111,265,834...111,317,176
Ensembl chr 3:118,187,636...118,237,403 		JBrowse link
G DUSP10 dual specificity phosphatase 10 ISO RGD PMID:19139271 RGD:7775012 NCBI chr 1:197,293,039...197,333,828
Ensembl chr 1:202,367,318...202,404,720 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO
IEA 		RGD
Ensembl		 PMID:12666205 GO_REF:0000107 RGD:9685388 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within
involved_in 		ISO (PMID:17006542)
(PMID:12666205) 		MGI
UniProt		 PMID:12666205 PMID:17006542 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:11301021) MGI PMID:11301021 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:16862533) MGI PMID:16862533 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of_or_within ISO (PMID:15895088) MGI PMID:15895088 NCBI chr15:56,424,422...56,747,075
Ensembl chr15:72,328,079...72,347,016 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:15629702) MGI PMID:15629702 NCBI chr 4:39,683,420...39,689,651 JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr10:133,682,456...133,683,445 JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G SIRT2 sirtuin 2 ISO RGD PMID:17344398 RGD:8553877 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799 		JBrowse link
G TMEM98 transmembrane protein 98 involved_in ISO (PMID:30249802) UniProt PMID:30249802 NCBI chr17:23,844,747...23,858,390
Ensembl chr17:24,133,357...24,146,912 		JBrowse link
neuroblast division in subventricular zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKNA AT-hook transcription factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:85,433,337...85,496,725 JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,854,280...54,046,410
Ensembl chr14:72,714,555...72,798,037 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,710,882...37,734,873
Ensembl chr19:46,217,935...46,238,103 		JBrowse link
neurohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTP orthopedia homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:37,667,070...37,677,802
Ensembl chr 5:38,196,327...38,206,313 		JBrowse link
G POU3F2 POU class 3 homeobox 2 acts_upstream_of_or_within ISO (PMID:8543156) MGI PMID:8543156 NCBI chr 6:96,677,651...96,682,145 JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:99,905,761...99,985,233
Ensembl chr 7:112,627,488...112,706,554 		JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,681,831...7,688,710
Ensembl chr17:7,669,626...7,673,834 		JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUN1 Sad1 and UNC84 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:971,632...1,031,152
Ensembl chr 7:1,190,462...1,247,390 		JBrowse link
G SUN2 Sad1 and UNC84 domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,649,993...19,671,340
Ensembl chr22:37,466,953...37,487,779 		JBrowse link
G SYNE2 spectrin repeat containing nuclear envelope protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,438,851...44,807,710
Ensembl chr14:62,751,560...63,064,136 		JBrowse link
nucleus accumbens development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:79,603,893...79,640,866
Ensembl chr15:98,891,770...98,928,396 		JBrowse link
oculomotor nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACKR3 atypical chemokine receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:123,795,664...123,810,067
Ensembl chr2B:242,666,173...242,667,261 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 1:5,008,155...5,012,868
Ensembl chr 1:6,265,738...6,266,937 		JBrowse link
oculomotor nerve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A involved_in ISO (PMID:9374403) BHF-UCL PMID:9374403 NCBI chr11:67,317,747...67,322,850 JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:8622766) UniProt PMID:8622766 NCBI chr 6:10,237,834...10,260,843 JBrowse link
olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245 		JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900 		JBrowse link
G ARX aristaless related homeobox acts_upstream_of_or_within ISO (PMID:15677725) MGI PMID:15677725 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186 		JBrowse link
G CRTAC1 cartilage acidic protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:94,476,425...94,641,786
Ensembl chr10:97,973,565...98,138,558 		JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DPYSL2 dihydropyrimidinase like 2 ISO RGD PMID:14751288 RGD:2316247 NCBI chr 8:25,786,950...25,927,782
Ensembl chr 8:22,693,863...22,834,080 		JBrowse link
G EFNA2 ephrin A2 ISO RGD PMID:12234653 RGD:634733
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G EOMES eomesodermin acts_upstream_of_or_within ISO (PMID:19435790) MGI PMID:19435790 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FUT1 fucosyltransferase 1 (H blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:45,747,261...45,753,436
Ensembl chr19:54,340,782...54,341,882 		JBrowse link
G GSX2 GS homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19109490) MGI PMID:19109490 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:25331604) MGI PMID:25331604 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:105,965,478...105,988,213
Ensembl chr 6:109,831,223...109,851,436 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr21:32,665,361...32,741,592
Ensembl chr21:45,914,665...46,042,990 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:18024993) MGI
UniProt		 PMID:18024993 GO_REF:0000117 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G SALL3 spalt like transcription factor 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr18:72,381,249...72,403,789 JBrowse link
G SEMA3A semaphorin 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,929,699...76,484,246
Ensembl chr 7:89,590,359...90,004,122 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 1:944,428...1,029,695
Ensembl chr 1:2,091,620...2,174,080 		JBrowse link
G SLIT1 slit guidance ligand 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095 		JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:12097499) MGI
UniProt		 PMID:12097499 GO_REF:0000117 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:69,446,355...69,502,351
Ensembl chr14:88,802,812...88,857,055 		JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:144,437,075...144,443,516
Ensembl chr 3:152,019,013...152,024,502 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:126,691,534...126,705,788
Ensembl chr  X:136,954,024...136,967,819 		JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in ISO (PMID:17360927) UniProt PMID:17360927 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:17360927) UniProt PMID:17360927 NCBI chr 3:76,013,780...77,764,156
Ensembl chr 3:79,030,223...79,632,309 		JBrowse link
G SALL3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (PMID:18260139) MGI PMID:18260139 NCBI chr18:72,381,249...72,403,789 JBrowse link
G WNT5A Wnt family member 5A involved_in ISO (PMID:21539518) UniProt PMID:21539518 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:18184563) MGI PMID:18184563 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DLX5 distal-less homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in ISO (PMID:18024993) UniProt PMID:18024993 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G UNCX UNC homeobox acts_upstream_of_or_within ISO (PMID:20692344) MGI PMID:20692344 NCBI chr 7:1,479,804...1,485,041 JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:14736749 RGD:8552333 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
olfactory cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:135,469,495...135,497,303
Ensembl chr 1:139,390,549...139,418,303 		JBrowse link
olfactory lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:12926013) MGI PMID:12926013 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G SEMA7A semaphorin 7A (JohnMiltonHagen blood group) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:53,351,662...53,376,327
Ensembl chr15:72,972,475...72,996,953 		JBrowse link
oligodendrocyte cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G SOX6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
oligodendrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G CD9 CD9 molecule ISO RGD PMID:12420314 RGD:2326210 NCBI chr12:6,327,783...6,366,083
Ensembl chr12:6,245,348...6,283,385 		JBrowse link
G CERS5 ceramide synthase 5 ISO RGD PMID:21148554 RGD:156431059 NCBI chr12:38,588,014...38,626,069
Ensembl chr12:39,484,975...39,522,898 		JBrowse link
G CERS6 ceramide synthase 6 ISO RGD PMID:21148554 RGD:156431059 NCBI chr2B:55,711,661...56,036,909
Ensembl chr2B:173,180,436...173,498,553 		JBrowse link
G EIF2B1 eukaryotic translation initiation factor 2B subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:121,206,380...121,218,749
Ensembl chr12:125,433,227...125,446,665 		JBrowse link
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,554,516...55,561,201
Ensembl chr14:74,399,056...74,405,770 		JBrowse link
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,154,600...44,290,407
Ensembl chr 1:45,525,137...45,650,259 		JBrowse link
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:27,368,189...27,374,265
Ensembl chr2A:27,456,457...27,462,706 		JBrowse link
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,170,806...181,180,923
Ensembl chr 3:189,652,554...189,665,528 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:12574417) MGI PMID:12574417 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G GSN gelsolin ISO RGD PMID:7817780 RGD:1599870 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831 		JBrowse link
G GSTP1 glutathione S-transferase pi 1 ISO RGD PMID:17681700 RGD:2317862 NCBI chr11:62,942,756...62,945,701
Ensembl chr11:66,253,421...66,256,472 		JBrowse link
G HDAC10 histone deacetylase 10 ISO RGD PMID:18627006 RGD:2306445 NCBI chr22:30,473,753...30,481,369
Ensembl chr22:49,473,369...49,479,216 		JBrowse link
G HDAC11 histone deacetylase 11 ISO RGD PMID:18627006 RGD:2306445 NCBI chr 3:13,400,788...13,427,010
Ensembl chr 3:13,744,475...13,769,997 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:17006542) MGI PMID:17006542 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:11301021) MGI PMID:11301021 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 acts_upstream_of_or_within ISO (PMID:17942730) MGI PMID:17942730 NCBI chr 1:135,391,321...135,424,100 JBrowse link
G KCNQ3 potassium voltage-gated channel subfamily Q member 3 ISO RGD PMID:21750731 RGD:9686431 NCBI chr 8:128,769,930...129,134,671
Ensembl chr 8:131,755,454...131,815,237 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:11948806 RGD:10054294 NCBI chr 9:82,013,960...82,179,227
Ensembl chr 9:110,179,600...110,279,038 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:15504915 RGD:2303714 NCBI chr 8:52,318,497...52,455,741
Ensembl chr 8:49,755,708...49,825,287 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:26140854 RGD:11343660 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,386,820...60,410,730
Ensembl chr  X:70,443,667...70,466,942 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:17382307 RGD:2317494 NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,052,219...57,088,105
Ensembl chr11:60,412,780...60,448,579 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G NSUN5 NOP2/Sun RNA methyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,455,353...80,461,316 JBrowse link
G OLIG1 oligodendrocyte transcription factor 1 involved_in ISO (PMID:25762682) CACAO PMID:25762682 NCBI chr21:19,432,165...19,434,481 JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:22433866 RGD:243048458 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SOX10 SRY-box transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:18,885,679...18,897,927
Ensembl chr22:36,713,310...36,723,439 		JBrowse link
G SOX11 SRY-box transcription factor 11 ISO RGD PMID:9632656 RGD:68859 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19741146) MGI PMID:19741146 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TPPP tubulin polymerization promoting protein involved_in ISO (PMID:31522887) UniProt PMID:31522887 Ensembl chr 5:779,090...797,979 JBrowse link
G WASF3 WASP family member 3 acts_upstream_of_or_within ISO (PMID:16723544) MGI PMID:16723544 NCBI chr13:7,849,687...7,980,979
Ensembl chr13:26,250,171...26,328,553 		JBrowse link
G ZNF488 zinc finger protein 488 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:16908628) MGI
TreeGrafter		 PMID:16908628 GO_REF:0000118 NCBI chr10:46,565,330...46,584,964 JBrowse link
oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E ISO RGD PMID:21972082 RGD:6903911 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G BCL2 BCL2 apoptosis regulator ISO RGD PMID:12787069 RGD:631874 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BCL2L10 BCL2 like 10 ISO RGD PMID:12787069 RGD:631874 NCBI chr15:31,049,509...31,057,273
Ensembl chr15:49,376,576...49,380,109 		JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:12787069 RGD:631874 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634 		JBrowse link
G BOK BCL2 family apoptosis regulator BOK ISO RGD PMID:12787069 RGD:631874 NCBI chr2B:128,832,458...128,847,918
Ensembl chr2B:247,626,494...247,640,238 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDKN2C cyclin dependent kinase inhibitor 2C ISO RGD PMID:11969268 RGD:1298749 NCBI chr 1:50,214,767...50,221,465
Ensembl chr 1:51,704,528...51,718,374 		JBrowse link
G CNP 2'',3''-cyclic nucleotide 3'' phosphodiesterase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,338,085...15,349,089
Ensembl chr17:15,560,056...15,568,916 		JBrowse link
G CSK C-terminal Src kinase ISO RGD PMID:15504915 RGD:2303714 NCBI chr15:53,724,814...53,745,710
Ensembl chr15:73,342,703...73,363,476 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G DLX1 distal-less homeobox 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DRD3 dopamine receptor D3 acts_upstream_of ISO (PMID:9651217) MGI PMID:9651217 NCBI chr 3:111,265,834...111,317,176
Ensembl chr 3:118,187,636...118,237,403 		JBrowse link
G DUSP10 dual specificity phosphatase 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:197,293,039...197,333,828
Ensembl chr 1:202,367,318...202,404,720 		JBrowse link
G EED embryonic ectoderm development acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:81,295,068...81,330,321
Ensembl chr11:84,902,330...84,937,906 		JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21490970 RGD:5131646 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862 		JBrowse link
G EXOC4 exocyst complex component 4 ISO RGD PMID:16478790 RGD:2314419 NCBI chr 7:125,226,107...126,030,486
Ensembl chr 7:137,734,400...138,536,214 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GPR17 G protein-coupled receptor 17 ISO RGD PMID:24613411 RGD:13792699 NCBI chr2B:32,623,444...32,630,256
Ensembl chr2B:128,316,464...128,321,519 		JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:24613411 RGD:13792699 NCBI chr11:62,624,647...62,644,846
Ensembl chr11:65,939,164...65,959,066 		JBrowse link
G GRK5 G protein-coupled receptor kinase 5 ISO RGD PMID:24613411 RGD:13792699 NCBI chr10:115,776,236...116,026,221
Ensembl chr10:119,200,688...119,450,809 		JBrowse link
G HDAC1 histone deacetylase 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of ISO (PMID:19503085) MGI PMID:19503085 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of ISO (PMID:17006542) MGI PMID:17006542 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:14991837 RGD:9685479 NCBI chr 7:26,835,881...26,846,578
Ensembl chr 7:26,439,443...26,449,985 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of ISO (PMID:11301021) MGI PMID:11301021 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G ID4 inhibitor of DNA binding 4 acts_upstream_of ISO (PMID:16862533) MGI PMID:16862533 NCBI chr 6:19,665,197...19,668,517 JBrowse link
G LINGO1 leucine rich repeat and Ig domain containing 1 acts_upstream_of ISO (PMID:15895088) MGI PMID:15895088 NCBI chr15:56,424,422...56,747,075
Ensembl chr15:72,328,079...72,347,016 		JBrowse link
G LOC103785028 polycomb protein SUZ12 acts_upstream_of_or_within ISO (PMID:28041882) MGI PMID:28041882 NCBI chr17:24,790,921...24,853,790 JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:20697302 RGD:12789708 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,291,307...8,346,822
Ensembl chr 7:7,643,780...7,684,246 		JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G MYRF myelin regulatory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:57,052,219...57,088,105
Ensembl chr11:60,412,780...60,448,579 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:29106906)
(PMID:29437824) 		MGI PMID:29106906 PMID:29437824 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:11171336), (PMID:11493571) MGI PMID:11171336 PMID:11493571
G NKX2-2 NK2 homeobox 2 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:15629701)
(PMID:15629702) 		MGI PMID:15629701 PMID:15629702 NCBI chr 4:39,683,420...39,689,651 JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO
IEA 		(PMID:15629701) MGI
Ensembl		 PMID:15629701 GO_REF:0000107 Ensembl chr10:133,682,456...133,683,445 JBrowse link
G NLGN3 neuroligin 3 acts_upstream_of_or_within ISO (PMID:19139271) MGI PMID:19139271 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:12876431 GO_REF:0000107 RGD:1581402 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NRG1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:11756753) MGI PMID:11756753 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of
acts_upstream_of_or_within 		ISO (PMID:11566099)
(PMID:16436615) 		RGD
MGI		 PMID:11566099 PMID:16436615 PMID:22173726 RGD:40902844 NCBI chr21:19,387,860...19,391,291 JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:26166575) MGI PMID:26166575 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G PTPRA protein tyrosine phosphatase receptor type A ISO RGD PMID:19812040 RGD:2314625 NCBI chr20:2,962,701...3,125,282
Ensembl chr20:2,801,905...2,888,195 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,941,134...48,130,538
Ensembl chr11:48,613,761...48,670,494 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 involved_in ISO
IEA 		RGD
Ensembl		 PMID:8812065 GO_REF:0000107 RGD:9590122 NCBI chr 7:113,882,557...114,073,283
Ensembl chr 7:126,569,630...126,758,155 		JBrowse link
G RHEB Ras homolog, mTORC1 binding acts_upstream_of ISO (PMID:25411504) MGI PMID:25411504 NCBI chr 7:143,054,747...143,108,011 JBrowse link
G RTN4 reticulon 4 ISO RGD PMID:19236864 RGD:2314931 NCBI chr2A:55,129,272...55,207,031 JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SLC8A3 solute carrier family 8 member A3 involved_in ISO (PMID:21959935) UniProt PMID:21959935 NCBI chr14:50,634,091...50,779,712 JBrowse link
G SOX10 SRY-box transcription factor 10 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:24204311), (PMID:27532821) Ensembl
UniProt		 PMID:24204311 PMID:27532821 GO_REF:0000107 NCBI chr22:18,885,679...18,897,927
Ensembl chr22:36,713,310...36,723,439 		JBrowse link
G SOX5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr12:62,361,631...62,780,805
Ensembl chr12:64,971,818...65,388,694 		JBrowse link
G SOX6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 ISO RGD PMID:16288477 RGD:11038733 NCBI chr17:52,083,676...52,087,454
Ensembl chr17:56,937,295...56,944,425 		JBrowse link
G TPPP tubulin polymerization promoting protein involved_in ISO (PMID:31522887) UniProt PMID:31522887 Ensembl chr 5:779,090...797,979 JBrowse link
G TRPC4 transient receptor potential cation channel subfamily C member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:18,852,991...19,081,790
Ensembl chr13:37,445,015...37,592,115 		JBrowse link
G TSPAN2 tetraspanin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:87,472,017...87,511,719
Ensembl chr 1:122,520,308...122,561,850 		JBrowse link
G VTN vitronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,403,813...28,407,202
Ensembl chr17:28,906,508...28,909,583 		JBrowse link
orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARPC5 actin related protein 2/3 complex subunit 5 ISO RGD PMID:23459330 RGD:11049475 NCBI chr 1:159,156,229...159,165,898
Ensembl chr 1:163,311,111...163,323,554 		JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:22015925 RGD:7248608 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:22015925 RGD:7248608 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (PMID:20410112) UniProt PMID:20410112 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G RELN reelin ISO RGD PMID:20035841 RGD:2317761 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
pallium cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:8,479,806...8,538,336
Ensembl chr17:8,468,240...8,519,552 		JBrowse link
pallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
pituitary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCYAP1 adenylate cyclase activating polypeptide 1 ISO RGD PMID:18160680 RGD:2325274 NCBI chr18:13,414,618...13,421,668
Ensembl chr18:15,713,479...15,717,749 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:17180597 RGD:2306413 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 ISO RGD PMID:17180597 RGD:2306413 NCBI chr15:79,603,893...79,640,866
Ensembl chr15:98,891,770...98,928,396 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:83,185,040...83,353,239
Ensembl chr10:86,837,469...86,912,912 		JBrowse link
G CDH1 cadherin 1 ISO RGD PMID:17373711 RGD:2289637 NCBI chr16:49,108,745...49,206,347
Ensembl chr16:68,502,584...68,596,488 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:8946059 RGD:2313681 NCBI chr11:123,272,111...123,400,413
Ensembl chr11:127,174,721...127,288,673 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:65,979,443...66,069,314
Ensembl chr 5:71,028,187...71,111,706 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within 		ISS
IEA 		UniProt
Ensembl
TreeGrafter		 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347 		JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:504232) MGI PMID:504232 NCBI chr12:22,954,946...23,096,623 JBrowse link
G INHBB inhibin subunit beta B ISO RGD PMID:18160680 RGD:2325274 NCBI chr2B:7,278,944...7,284,632 JBrowse link
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:17392792) MGI PMID:17392792 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G MSX1 msh homeobox 1 ISO RGD PMID:16451220 RGD:5132608 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:9806931) MGI PMID:9806931
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PCSK1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:15208361 RGD:2308902 NCBI chr 5:18,917,488...18,960,102
Ensembl chr 5:19,064,004...19,106,486 		JBrowse link
G PITX1 paired like homeodomain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:130,422,920...130,429,828
Ensembl chr 5:136,565,285...136,570,350 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:103,112,624...103,137,356 JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:16556738) MGI PMID:16556738 NCBI chr 3:87,390,157...87,407,611
Ensembl chr 3:89,501,298...89,521,168 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:11731482) MGI PMID:11731482 NCBI chr 5:173,086,726...173,090,461 JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:17015435) MGI PMID:17015435 NCBI chr 4:20,719,548...20,835,439
Ensembl chr 4:25,995,263...26,107,683 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within
involved_in 		ISO (PMID:18775421) MGI
UniProt		 PMID:18775421 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
G SOX3 SRY-box transcription factor 3 involved_in ISO (PMID:14981518) UniProt PMID:14981518 NCBI chr  X:129,654,296...129,656,446 JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:17919533) MGI PMID:17919533 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:8313466) MGI PMID:8313466 NCBI chr 9:108,198,350...108,228,887
Ensembl chr 9:137,168,722...137,197,382 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:32,906,641...32,927,119
Ensembl chr20:34,028,415...34,046,354 		JBrowse link
positive regulation of astrocyte activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:33841088 RGD:151665762 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415 		JBrowse link
G TTBK1 tau tubulin kinase 1 acts_upstream_of ISO (PMID:16923168) ARUK-UCL PMID:16923168 NCBI chr 6:42,835,285...42,880,100
Ensembl chr 6:44,131,360...44,169,912 		JBrowse link
positive regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR3 actin related protein 3 ISO RGD PMID:23843614 RGD:8553949 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729 		JBrowse link
G BIN1 bridging integrator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:33,168,767...33,228,075
Ensembl chr2B:127,716,550...127,775,378 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G CLCF1 cardiotrophin like cytokine factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,722,611...62,734,279 JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (PMID:19109490) MGI PMID:19109490 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:22270046 RGD:6482669 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:58,023,704...58,081,895
Ensembl chr 5:59,669,606...59,708,817 		JBrowse link
G LIF LIF interleukin 6 family cytokine acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:11,276,576...11,282,972
Ensembl chr22:29,078,862...29,095,608 		JBrowse link
G MAG myelin associated glycoprotein ISO RGD PMID:19349915 RGD:9685287 NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 ISO RGD PMID:23769735 RGD:10045891 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G SERPINE2 serpin family E member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
positive regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PITX3 paired like homeodomain 3 ISO RGD PMID:18385323 RGD:11535083 NCBI chr10:98,833,330...98,846,292 JBrowse link
G RYK receptor like tyrosine kinase involved_in ISO PMID:23517308 ParkinsonsUK-UCL PMID:23517308 RGD:11054651 NCBI chr 3:131,174,507...131,296,815 JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:177,720,832...177,731,551
Ensembl chr 1:182,022,600...182,028,623 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
positive regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:18579678) MGI PMID:18579678 NCBI chr 4:105,002,447...105,005,704 JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
positive regulation of microglia differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:21347250) ParkinsonsUK-UCL PMID:21347250 NCBI chr10:48,950,704...48,953,815
Ensembl chr10:51,084,027...51,089,776 		JBrowse link
positive regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase ISO RGD PMID:16634055 RGD:1599295 NCBI chr17:3,492,304...3,517,882
Ensembl chr17:3,522,858...3,546,279 		JBrowse link
G CLCN2 chloride voltage-gated channel 2 ISO RGD PMID:29344669 RGD:213230158 NCBI chr 3:181,383,608...181,399,200
Ensembl chr 3:189,862,489...189,881,049 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in ISO (PMID:20534485) BHF-UCL PMID:20534485 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G DAG1 dystroglycan 1 ISO RGD PMID:17395644 RGD:11541054 NCBI chr 3:49,396,180...49,464,689
Ensembl chr 3:50,640,615...50,703,852 		JBrowse link
G ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:22139091 RGD:9685417 NCBI chr 8:116,248,587...116,364,966
Ensembl chr 8:118,998,530...119,114,273 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G HDAC1 histone deacetylase 1 acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:22573687 GO_REF:0000107 RGD:9590148 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (PMID:19503085) RGD
MGI		 PMID:19503085 PMID:22573687 RGD:9590148 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004 		JBrowse link
G IL33 interleukin 33 ISO RGD PMID:31165473 RGD:40400907 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624 		JBrowse link
G IL34 interleukin 34 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:70,480,917...70,494,693 JBrowse link
G MDK midkine involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:19439614 GO_REF:0000107 RGD:10040963 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G MYRF myelin regulatory factor ISO RGD PMID:27370227 RGD:213230157 NCBI chr11:57,052,219...57,088,105
Ensembl chr11:60,412,780...60,448,579 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:15629702) MGI PMID:15629702 NCBI chr 4:39,683,420...39,689,651 JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr10:133,682,456...133,683,445 JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:11566099) MGI PMID:11566099 NCBI chr21:19,387,860...19,391,291 JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:18543250 RGD:2301878 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 ISO RGD PMID:22041901 RGD:9491827 NCBI chr14:3,737,741...3,746,646
Ensembl chr14:21,836,984...21,846,018 		JBrowse link
G PTN pleiotrophin involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G PTPRA protein tyrosine phosphatase receptor type A ISO RGD PMID:19812040 RGD:2314625 NCBI chr20:2,962,701...3,125,282
Ensembl chr20:2,801,905...2,888,195 		JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 involved_in ISO PMID:30667096 UniProt PMID:30667096 RGD:14397553 NCBI chr 7:113,882,557...114,073,283
Ensembl chr 7:126,569,630...126,758,155 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:20956316), (PMID:21253564), (PMID:28188285) RGD
UniProt		 PMID:17575274 PMID:20956316 PMID:21253564 PMID:28188285 RGD:10045992 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RHEB Ras homolog, mTORC1 binding acts_upstream_of_or_within ISO (PMID:25411504) MGI PMID:25411504 NCBI chr 7:143,054,747...143,108,011 JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:73,712,808...75,001,831
Ensembl chr11:77,338,422...77,743,909 		JBrowse link
G TLR2 toll like receptor 2 ISO RGD PMID:21971760 RGD:7241097 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646 		JBrowse link
G TP73 tumor protein p73 ISO RGD PMID:14960496 RGD:2291843 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:58,894,939...58,923,176
Ensembl chr10:61,223,925...61,329,657 		JBrowse link
G ZNF488 zinc finger protein 488 acts_upstream_of_or_within
involved_in 		ISO (PMID:16908628)
(PMID:22355521) 		MGI
UniProt		 PMID:16908628 PMID:22355521 NCBI chr10:46,565,330...46,584,964 JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
principal sensory nucleus of trigeminal nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIRREL3 kirre like nephrin family adhesion molecule 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:121,236,962...121,821,806
Ensembl chr11:125,146,563...125,723,504 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16819976)
(PMID:16956587) 		MGI PMID:16819976 PMID:16956587 NCBI chr22:14,077,463...14,929,250 JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G NFIB nuclear factor I B involved_in ISO (PMID:19107796) UniProt PMID:19107796 NCBI chr 9:13,923,516...14,376,264 JBrowse link
prolactin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
putamen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP2 forkhead box P2 involved_in ISS
IEA 		UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
pyramidal neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205) MGI PMID:16625205 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G DCLK2 doublecortin like kinase 2 acts_upstream_of_or_within ISO (PMID:19342486) MGI PMID:19342486 NCBI chr 4:142,412,945...142,590,129
Ensembl chr 4:154,064,018...154,239,156 		JBrowse link
G DCX doublecortin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (PMID:20410112) UniProt PMID:20410112 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G PLXNA3 plexin A3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:143,900,029...143,915,391
Ensembl chr  X:153,772,700...153,786,167 		JBrowse link
G SCYL2 SCY1 like pseudokinase 2 involved_in ISO (PMID:26203146) UniProt PMID:26203146 NCBI chr12:97,848,852...97,920,561
Ensembl chr12:101,255,412...101,326,808 		JBrowse link
G SLC4A10 solute carrier family 4 member 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:48,917,958...49,278,724
Ensembl chr2B:166,371,645...166,647,554 		JBrowse link
pyramidal neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G LYPD6 LY6/PLAUR domain containing 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:10,392,962...10,536,125
Ensembl chr2B:153,792,413...153,828,297 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:35522199) MGI PMID:35522199 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
G UNC5D unc-5 netrin receptor D acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chr 8:34,544,056...35,101,535
Ensembl chr 8:31,724,796...32,276,697 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DISC1 DISC1 scaffold protein ISO RGD PMID:16299498 RGD:5509783 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079 		JBrowse link
G LOC100990531 uncharacterized LOC100990531 acts_upstream_of_or_within ISO (PMID:22726835) MGI PMID:22726835 NCBI chr14:9,545,147...9,572,309 JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:75,581,794...75,829,748
Ensembl chr10:78,294,867...78,492,475 		JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:20153830) MGI
TreeGrafter		 PMID:20153830 GO_REF:0000118 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr12:129,549,399...129,579,087 JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA2 catenin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:79,594,694...80,745,885
Ensembl chr2A:81,303,559...82,307,258 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr11:102,895,611...102,994,447
Ensembl chr11:106,371,759...106,469,989 		JBrowse link
G DAB1 DAB adaptor protein 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:9338784) Ensembl
UniProt		 PMID:9338784 GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:16,740,707...17,031,415
Ensembl chr22:34,586,044...34,870,257 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 3:138,772,581...138,780,763
Ensembl chr 3:146,369,779...146,377,233 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr17:18,867,241...18,921,792
Ensembl chr17:19,193,860...19,236,427 		JBrowse link
regulation of astrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTN2 contactin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:180,645,259...180,680,081
Ensembl chr 1:184,931,497...184,966,482 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:33750804) UniProt PMID:33750804 NCBI chr 6:161,361,413...161,523,414 JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G LHX5 LIM homeobox 5 acts_upstream_of_or_within ISO (PMID:17664423) MGI PMID:17664423 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10375501) MGI PMID:10375501 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr18:40,594,124...40,639,720 JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G ZNF423 zinc finger protein 423 acts_upstream_of_or_within ISO (PMID:27727273) MGI PMID:27727273 NCBI chr16:29,748,405...30,118,999
Ensembl chr16:48,639,118...48,969,727 		JBrowse link
regulation of establishment of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRA2 adhesion G protein-coupled receptor A2 acts_upstream_of_or_within
involved_in 		IEA
ISO 		(PMID:28288111) Ensembl
UniProt		 PMID:28288111 GO_REF:0000107 NCBI chr 8:37,098,486...37,144,437
Ensembl chr 8:34,276,267...34,321,836 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,886,741...35,974,133
Ensembl chr 9:36,699,631...36,774,116 		JBrowse link
regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 involved_in ISO (PMID:22290867) ParkinsonsUK-UCL PMID:22290867 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258 		JBrowse link
regulation of oligodendrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20223197) MGI PMID:20223197 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DUSP15 dual specificity phosphatase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:28,141,174...28,164,287
Ensembl chr20:29,284,838...29,293,367 		JBrowse link
G OPALIN oligodendrocytic myelin paranodal and inner loop protein involved_in ISO (PMID:30837646) UniProt PMID:30837646 NCBI chr10:92,956,966...92,973,093 JBrowse link
G SLC45A3 solute carrier family 45 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,266,533...181,289,536
Ensembl chr 1:185,552,015...185,566,359 		JBrowse link
G SOX1 SRY-box transcription factor 1 involved_in ISO (PMID:19723505) UniProt PMID:19723505 NCBI chr13:93,023,958...93,269,467 JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19503085) MGI PMID:19503085 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
G TNFRSF21 TNF receptor superfamily member 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:46,815,762...46,894,286
Ensembl chr 6:48,079,749...48,158,356 		JBrowse link
G WDR1 WD repeat domain 1 acts_upstream_of_or_within ISO PMID:20631256 MGI PMID:20631256 RGD:8693352 NCBI chr 4:4,487,054...4,516,732
Ensembl chr 4:9,805,164...9,848,032 		JBrowse link
regulation of timing of subpallium neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:7508007) MGI PMID:7508007 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:7508007) MGI PMID:7508007 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:10230789) MGI PMID:10230789 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:8102800), (PMID:9806922) 		MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB2 homeobox B2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:8102800), (PMID:9806922) 		MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693 		JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXB1 homeobox B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB3 homeobox B3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:8,946,441...8,987,876
Ensembl chr17:9,147,784...9,171,021 		JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 ISO RGD PMID:21501682 RGD:8552349 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472 		JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472 		JBrowse link
somatic motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:5,587,875...5,606,883
Ensembl chr 8:1,658,694...1,700,754 		JBrowse link
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within ISO (PMID:16319924) MGI PMID:16319924 NCBI chr11:67,317,747...67,322,850 JBrowse link
G TCTN1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:108,182,496...108,232,202
Ensembl chr12:111,577,755...111,610,754 		JBrowse link
somatic motor neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:9230312) MGI PMID:9230312 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
somatotropin secreting cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRHR growth hormone releasing hormone receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:31,582,134...31,592,914
Ensembl chr 7:31,696,914...31,712,200 		JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:17015435) MGI PMID:17015435 NCBI chr 3:87,390,157...87,407,611
Ensembl chr 3:89,501,298...89,521,168 		JBrowse link
somatotropin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:1334535), (PMID:6194978) MGI PMID:1334535 PMID:6194978 NCBI chr 3:87,390,157...87,407,611
Ensembl chr 3:89,501,298...89,521,168 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:6194978) MGI PMID:6194978 NCBI chr 5:173,086,726...173,090,461 JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801 		JBrowse link
spinal cord anterior/posterior patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:33,154,530...33,168,427
Ensembl chr12:33,879,180...33,893,252 		JBrowse link
spinal cord association neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:20,651,617...20,664,586 JBrowse link
G GSX1 GS homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:9,082,674...9,085,014
Ensembl chr13:27,427,569...27,428,876 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G LHX5 LIM homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:119,848,323...119,867,007
Ensembl chr 1:88,698,962...88,718,760 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr 6:37,197,192...37,264,426
Ensembl chr 6:38,394,341...38,453,604 		JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (PMID:9858722) MGI PMID:9858722 NCBI chr2B:109,441,938...109,541,449
Ensembl chr2B:228,022,453...228,121,874 		JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:17,589,513...17,707,442
Ensembl chr 1:18,639,641...18,756,952 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:46,524,484...46,540,595
Ensembl chr 1:48,042,594...48,048,622 		JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
spinal cord association neuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LBX1 ladybird homeobox 1 acts_upstream_of_or_within ISO (PMID:12062038) MGI PMID:12062038 NCBI chr10:97,830,026...97,832,751 JBrowse link
spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chr15:67,492,494...67,563,265
Ensembl chr15:86,733,853...86,771,420 		JBrowse link
G ACTL6A actin like 6A ISO RGD PMID:23677776 RGD:9587760 NCBI chr 3:176,595,149...176,620,556
Ensembl chr 3:184,765,523...184,790,983 		JBrowse link
G ACTL6B actin like 6B ISO RGD PMID:23677776 RGD:9587760 NCBI chr 7:92,670,166...92,683,571
Ensembl chr 7:106,070,839...106,083,646 		JBrowse link
G AHI1 Abelson helper integration site 1 ISO RGD PMID:19819228 RGD:11537397 NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232 		JBrowse link
G AKAP5 A-kinase anchoring protein 5 ISO RGD PMID:19535604 RGD:2313144 NCBI chr14:45,045,476...45,050,946
Ensembl chr14:63,302,200...63,303,483 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:23681769 RGD:10040966 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G BAG3 BAG cochaperone 3 ISO RGD PMID:19415333 RGD:2325845 NCBI chr10:116,221,747...116,248,692
Ensembl chr10:119,643,963...119,665,964 		JBrowse link
G DCX doublecortin ISO RGD PMID:25487013 RGD:12904756 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
G DPYSL2 dihydropyrimidinase like 2 ISO RGD PMID:8946055 RGD:2316253 NCBI chr 8:25,786,950...25,927,782
Ensembl chr 8:22,693,863...22,834,080 		JBrowse link
G EED embryonic ectoderm development ISO RGD PMID:20515739 RGD:9491842 NCBI chr11:81,295,068...81,330,321
Ensembl chr11:84,902,330...84,937,906 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:21935678), (PMID:23717624), (PMID:31666661) MGI PMID:21935678 PMID:23717624 PMID:31666661 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:19877275) MGI PMID:19877275 NCBI chr19:46,819,833...46,826,235
Ensembl chr19:55,736,325...55,742,589 		JBrowse link
G GLRA2 glycine receptor alpha 2 ISO RGD PMID:12124753 RGD:708602 NCBI chr  X:7,145,794...7,349,911
Ensembl chr  X:14,430,441...14,634,973 		JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:19446017 RGD:2325980 NCBI chr 5:148,879,996...149,206,914
Ensembl chr 5:154,879,080...155,204,660 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19446017 RGD:2325980 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167 		JBrowse link
G IFT80 intraflagellar transport 80 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905 		JBrowse link
G KCNH2 potassium voltage-gated channel subfamily H member 2 ISO RGD PMID:15365256 RGD:7243961 NCBI chr 7:142,528,979...142,562,074 JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LOC103785028 polycomb protein SUZ12 ISO RGD PMID:20515739 RGD:9491842 NCBI chr17:24,790,921...24,853,790 JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:74,598,870...74,622,502
Ensembl chr2A:76,105,957...76,128,495 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO cervical spinal cord RGD PMID:12605461 RGD:12790706 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:60,386,820...60,410,730
Ensembl chr  X:70,443,667...70,466,942 		JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO RGD PMID:9078435 RGD:9686095 NCBI chr22:17,933,995...17,944,196
Ensembl chr22:35,770,209...35,780,250 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:23681769 RGD:10040966 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G NEFH neurofilament heavy chain ISO RGD PMID:2108255 RGD:9698442 NCBI chr22:10,525,738...10,536,788 JBrowse link
G NEFL neurofilament light chain ISO RGD PMID:2108255 RGD:9698442 NCBI chr 8:24,218,510...24,224,627
Ensembl chr 8:21,134,533...21,140,694 		JBrowse link
G NEFM neurofilament medium chain ISO RGD PMID:2108255 RGD:9698442 NCBI chr 8:24,181,335...24,186,701
Ensembl chr 8:21,098,005...21,107,468 		JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr10:66,039,739...66,041,804
Ensembl chr10:68,571,614...68,572,258 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:17353270) MGI PMID:17353270 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NOG noggin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G NOVA1 NOVA alternative splicing regulator 1 ISO RGD PMID:12124753 RGD:708602 NCBI chr14:7,193,308...7,345,535
Ensembl chr14:25,314,077...25,466,861 		JBrowse link
G NPFF neuropeptide FF-amide peptide precursor ISO RGD PMID:12619141 RGD:1299340 NCBI chr12:35,245,172...35,246,710
Ensembl chr12:36,030,805...36,031,591 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:20195794 RGD:2325285 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PHGDH phosphoglycerate dehydrogenase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:82,803,155...82,835,465
Ensembl chr 1:117,800,843...117,833,462 		JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr16:604,366...605,560 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775 		JBrowse link
G PLXDC1 plexin domain containing 1 ISO RGD PMID:20411127 RGD:2325872 NCBI chr17:18,117,840...18,208,788
Ensembl chr17:18,395,119...18,484,094 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:12124753 RGD:708602 NCBI chr 1:99,382,924...99,474,053
Ensembl chr 1:98,105,913...98,196,723 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8453763 RGD:9831456 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G RAPGEF3 Rap guanine nucleotide exchange factor 3 ISO RGD PMID:18583150 RGD:9835386 NCBI chr12:40,974,756...40,999,471
Ensembl chr12:41,848,785...41,873,252 		JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:18583150 RGD:9835386 NCBI chr2B:60,022,738...60,339,981
Ensembl chr2B:177,655,733...177,793,644 		JBrowse link
G RNF2 ring finger protein 2 ISO RGD PMID:20515739 RGD:9491842 NCBI chr 1:160,568,438...160,626,783
Ensembl chr 1:164,721,458...164,779,420 		JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:10102268 RGD:68763 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308 		JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO RGD PMID:10102268 RGD:68763 NCBI chr 3:76,013,780...77,764,156
Ensembl chr 3:79,030,223...79,632,309 		JBrowse link
G SLIT1 slit guidance ligand 1 ISO RGD PMID:10102268 RGD:68763 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095 		JBrowse link
G SLIT2 slit guidance ligand 2 ISO RGD PMID:10102268 RGD:68763 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656 		JBrowse link
G SLIT3 slit guidance ligand 3 ISO RGD PMID:10102268 RGD:68763 NCBI chr 5:164,029,432...164,664,156
Ensembl chr 5:170,793,731...171,425,242 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISO (PMID:20646169) UniProt PMID:20646169 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G SOX12 SRY-box transcription factor 12 involved_in ISO (PMID:18505825) UniProt PMID:18505825 NCBI chr20:533,901...537,106 JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in ISO (PMID:20646169) UniProt PMID:20646169 NCBI chr 6:21,422,846...21,427,779 JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
G VIT vitrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:36,726,717...36,841,491
Ensembl chr2A:37,490,294...37,604,177 		JBrowse link
G ZIC1 Zic family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:144,437,075...144,443,516
Ensembl chr 3:152,019,013...152,024,502 		JBrowse link
G ZPR1 ZPR1 zinc finger involved_in ISO (PMID:22422766) UniProt PMID:22422766 NCBI chr11:111,613,940...111,623,539
Ensembl chr11:115,547,973...115,557,883 		JBrowse link
spinal cord dorsal/ventral patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRD chordin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,417,140...181,460,236
Ensembl chr 3:189,898,856...189,908,573 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:21761479) MGI PMID:21761479 NCBI chr19:46,819,833...46,826,235
Ensembl chr19:55,736,325...55,742,589 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (PMID:21209331) BHF-UCL PMID:21209331 NCBI chr 3:126,498,018...126,578,211
Ensembl chr 3:133,851,433...133,930,117 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:21761479) MGI PMID:21761479 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G INTU inturned planar cell polarity protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:119,793,245...119,890,949
Ensembl chr 4:131,109,733...131,186,590 		JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:15755804), (PMID:16364285)
(PMID:16364285)
(PMID:14603322) 		MGI PMID:14603322 PMID:15755804 PMID:16364285 NCBI chr 6:56,744,948...56,780,187
Ensembl chr 6:58,375,559...58,411,107 		JBrowse link
G RFX4 regulatory factor X4 acts_upstream_of_or_within ISO (PMID:19887680) MGI PMID:19887680 NCBI chr12:104,152,816...104,330,383
Ensembl chr12:107,550,254...107,724,623 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within 		ISO (PMID:21209331)
(PMID:19286674) 		BHF-UCL
MGI		 PMID:19286674 PMID:21209331 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr12:3,012,890...3,061,831
Ensembl chr12:2,944,769...2,993,278 		JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G HOXC10 homeobox C10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:34,764,956...34,770,088
Ensembl chr12:35,553,262...35,558,393 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:63,395,636...63,399,704
Ensembl chr2B:181,104,876...181,110,963 		JBrowse link
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G ISL2 ISL LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:55,250,837...55,257,775
Ensembl chr15:74,843,797...74,848,635 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G LMO4 LIM domain only 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,848,323...119,867,007
Ensembl chr 1:88,698,962...88,718,760 		JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:10482234)
(PMID:18539116) 		MGI
UniProt		 PMID:10482234 PMID:18539116 NCBI chr 7:148,622,701...148,628,532 JBrowse link
G NKX6-1 NK6 homeobox 1 acts_upstream_of_or_within ISO (PMID:11567614) MGI PMID:11567614 NCBI chr 4:39,683,420...39,689,651 JBrowse link
G NKX6-2 NK6 homeobox 2 acts_upstream_of_or_within ISO (PMID:11567614) MGI PMID:11567614 Ensembl chr10:133,682,456...133,683,445 JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:135,245,422...135,248,355
Ensembl chr 6:139,333,938...139,334,756 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:9230312) MGI PMID:9230312 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:19684112) MGI PMID:19684112 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472 		JBrowse link
spinal cord motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABT1 activator of basal transcription 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:26,428,906...26,432,706
Ensembl chr 6:27,086,465...27,088,668 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:17156092) MGI PMID:17156092 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:5,587,875...5,606,883
Ensembl chr 8:1,658,694...1,700,754 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:98,051,788...98,425,676
Ensembl chr11:101,536,471...101,909,194 		JBrowse link
G GBX1 gastrulation brain homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,733,463...142,754,447
Ensembl chr 7:154,888,479...154,907,060 		JBrowse link
G GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO (PMID:21943603) MGI PMID:21943603 NCBI chr11:70,494,185...70,585,921
Ensembl chr11:73,796,347...73,885,996 		JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:119,929,004...120,090,367
Ensembl chr2B:238,847,674...239,007,549 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:27,448,139...27,492,302
Ensembl chr2A:27,536,534...27,580,406 		JBrowse link
G IGHMBP2 immunoglobulin mu DNA binding protein 2 acts_upstream_of_or_within ISO (PMID:19299493) MGI PMID:19299493 NCBI chr11:63,991,285...64,028,430
Ensembl chr11:67,294,195...67,331,659 		JBrowse link
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G LBX1 ladybird homeobox 1 acts_upstream_of_or_within ISO (PMID:15769945) MGI PMID:15769945 NCBI chr10:97,830,026...97,832,751 JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:119,848,323...119,867,007
Ensembl chr 1:88,698,962...88,718,760 		JBrowse link
G LONRF2 LON peptidase N-terminal domain and ring finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr14:27,434,904...28,274,969
Ensembl chr14:45,752,214...46,583,991 		JBrowse link
G NFE2L1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:9,476,482...9,489,661
Ensembl chr17:9,657,847...9,671,040 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:21338882) MGI PMID:21338882 NCBI chr21:19,387,860...19,391,291 JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:135,245,422...135,248,355
Ensembl chr 6:139,333,938...139,334,756 		JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453 		JBrowse link
G SCYL1 SCY1 like pseudokinase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:60,884,136...60,897,790
Ensembl chr11:64,218,464...64,233,413 		JBrowse link
G SCYL3 SCY1 like pseudokinase 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:145,299,266...145,383,511
Ensembl chr 1:149,057,194...149,095,445 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
spinal cord oligodendrocyte cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:18287202) MGI PMID:18287202 NCBI chr21:19,387,860...19,391,291 JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in ISO (PMID:26525805) UniProt PMID:26525805 NCBI chr 1:179,675,017...179,730,628
Ensembl chr 1:184,003,907...184,016,504 		JBrowse link
G SOX6 SRY-box transcription factor 6 involved_in ISO (PMID:26525805) UniProt PMID:26525805 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
spinal cord oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:18287202) MGI PMID:18287202 NCBI chr21:19,387,860...19,391,291 JBrowse link
spinal cord patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RELN reelin acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:14648677 GO_REF:0000107 RGD:2317803 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
spinal cord ventral commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADARB1 adenosine deaminase RNA specific B1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:31,374,841...31,532,721
Ensembl chr21:44,715,931...44,815,748 		JBrowse link
G DCC DCC netrin 1 receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:45,717,924...46,913,998
Ensembl chr18:49,268,812...50,255,155 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B acts_upstream_of_or_within ISO (PMID:18199763) MGI PMID:18199763 NCBI chr14:79,795,262...79,898,472 JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,538,591...42,556,578
Ensembl chr 7:42,580,730...42,595,097 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21423165) BHF-UCL PMID:21423165 NCBI chr22:30,951,866...30,973,608 JBrowse link
G ZSWIM6 zinc finger SWIM-type containing 6 involved_in ISO (PMID:28433741) UniProt PMID:28433741 NCBI chr 5:52,453,762...52,664,847
Ensembl chr 5:54,096,958...54,305,965 		JBrowse link
striatum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G DRD1 dopamine receptor D1 acts_upstream_of_or_within ISO (PMID:17360497) RGD
MGI		 PMID:17360497 PMID:22015925 RGD:7248608 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257 		JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:22015925 RGD:7248608 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:12815709 RGD:11536004 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:17715336)
(PMID:11030759) 		MGI PMID:11030759 PMID:17715336 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18272292 RGD:13462055 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G RARB retinoic acid receptor beta acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:24,729,220...25,499,187
Ensembl chr 3:25,660,922...25,833,297 		JBrowse link
G SECISBP2 SECIS binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:60,408,272...60,456,945
Ensembl chr 9:88,454,531...88,498,095 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17035536) MGI PMID:17035536 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849 		JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 acts_upstream_of_or_within ISO (PMID:20418887) MGI PMID:20418887 NCBI chr13:68,810,639...68,831,189
Ensembl chr13:87,980,905...87,983,781 		JBrowse link
subpallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
substantia nigra development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in ISO (PMID:22926577) UniProt PMID:22926577
G ATP5PB ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:114,110,749...114,122,715
Ensembl chr 1:126,224,725...126,235,897 		JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr21:12,169,567...12,180,717
Ensembl chr21:25,519,441...25,537,363 		JBrowse link
G BASP1 brain abundant membrane attached signal protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:17,521,054...17,580,999 JBrowse link
G CALM1 calmodulin 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:71,015,099...71,026,322
Ensembl chr19:52,121,687...52,131,135
Ensembl chr2A:52,121,687...52,131,135 		JBrowse link
G CALM2 calmodulin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr2A:47,274,722...47,290,861
Ensembl chr2A:48,204,518...48,220,697 		JBrowse link
G CALM3 calmodulin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr19:43,593,069...43,602,550
Ensembl chr19:52,121,687...52,131,135 		JBrowse link
G CASP5 caspase 5 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:99,931,066...99,963,652 JBrowse link
G CCDC14 coiled-coil domain containing 14 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:121,018,879...121,066,563
Ensembl chr 3:127,918,294...127,965,906 		JBrowse link
G CDC42 cell division cycle 42 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G CKB creatine kinase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:84,145,931...84,149,093 JBrowse link
G CNP 2'',3''-cyclic nucleotide 3'' phosphodiesterase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:15,338,085...15,349,089
Ensembl chr17:15,560,056...15,568,916 		JBrowse link
G DYNLL1 dynein light chain LC8-type 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:118,078,401...118,080,822
Ensembl chr12:121,452,118...121,454,550 		JBrowse link
G ENO3 enolase 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:4,997,052...5,005,221
Ensembl chr17:4,986,116...4,992,876 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:17234579) MGI PMID:17234579 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G FGF9 fibroblast growth factor 9 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr13:2,967,713...3,000,554
Ensembl chr13:21,273,333...21,307,198 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:17234579) MGI PMID:17234579 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692 		JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:143,972,798...143,988,960
Ensembl chr  X:153,843,092...153,860,674 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GNB4 G protein subunit beta 4 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:176,428,475...176,483,905
Ensembl chr 3:184,601,229...184,630,913 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
G INA internexin neuronal intermediate filament protein alpha involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:99,877,665...99,890,947
Ensembl chr10:103,340,438...103,353,888 		JBrowse link
G LDHA lactate dehydrogenase A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:18,432,347...18,445,694
Ensembl chr11:18,115,250...18,128,400 		JBrowse link
G LOC100972703 cytochrome c oxidase subunit 6B1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr19:32,578,126...32,588,684
Ensembl chr19:41,314,020...41,324,489 		JBrowse link
G LOC100978345 putative beta-actin-like protein 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr2B:28,292,280...28,334,471 JBrowse link
G MAG myelin associated glycoprotein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401 		JBrowse link
G MAOB monoamine oxidase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:36,217,710...36,333,516
Ensembl chr  X:44,042,000...44,157,941 		JBrowse link
G MAPKAP1 MAPK associated protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:96,561,157...96,825,478
Ensembl chr 9:125,072,137...125,336,658 		JBrowse link
G MBP myelin basic protein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr18:70,369,882...70,526,693
Ensembl chr18:73,629,522...73,755,351 		JBrowse link
G NDRG2 NDRG family member 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:1,831,764...1,840,819
Ensembl chr14:19,913,674...19,967,470 		JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:47,528,680...47,534,206
Ensembl chr11:48,078,332...48,083,863 		JBrowse link
G PADI2 peptidyl arginine deiminase 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:16,011,708...16,064,344
Ensembl chr 1:17,067,729...17,120,513 		JBrowse link
G PLP1 proteolipid protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:93,015,098...93,031,193
Ensembl chr  X:103,353,184...103,412,513 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:75,452,153...75,465,022
Ensembl chr 5:80,732,954...80,744,448 		JBrowse link
G RHOA ras homolog family member A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G S100A1 S100 calcium binding protein A1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:128,984,296...128,987,979 JBrowse link
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:107,516,556...107,560,930
Ensembl chr 9:136,493,957...136,533,655 		JBrowse link
G SIRT2 sirtuin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799 		JBrowse link
G SUDS3 SIN3A corepressor complex component SDS3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:115,957,736...115,999,217
Ensembl chr12:119,336,258...119,377,030 		JBrowse link
G SYNGR3 synaptogyrin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr16:710,090...714,421
Ensembl chr16:2,078,645...2,083,100 		JBrowse link
G SYPL2 synaptophysin like 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:111,843,315...111,859,475
Ensembl chr 1:111,072,937...111,085,621 		JBrowse link
G TTBK1 tau tubulin kinase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:42,835,285...42,880,100
Ensembl chr 6:44,131,360...44,169,912 		JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 4:35,580,755...35,592,314
Ensembl chr 4:41,428,759...41,440,129 		JBrowse link
G YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr17:1,332,004...1,387,120
Ensembl chr17:1,229,080...1,285,470 		JBrowse link
G YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr22:12,966,653...12,979,695
Ensembl chr22:30,819,821...30,831,804 		JBrowse link
G YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr2A:9,573,413...9,620,495 JBrowse link
G ZNF148 zinc finger protein 148 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:122,357,670...122,507,142
Ensembl chr 3:129,229,690...129,320,554 		JBrowse link
subthalamic nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:103,112,624...103,137,356 JBrowse link
subthalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr2B:106,217,926...106,220,444 JBrowse link
superior temporal gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:20083104 RGD:2325172 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462 		JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G SLIT1 slit guidance ligand 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095 		JBrowse link
G SRF serum response factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768 		JBrowse link
telencephalon cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL12 C-X-C motif chemokine ligand 12 ISO RGD PMID:16971524 RGD:2306584 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:16971524 RGD:2306584 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18786357), (PMID:20181579) MGI PMID:18786357 PMID:20181579
G SLIT1 slit guidance ligand 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095 		JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:14960623) MGI
UniProt		 PMID:14960623 GO_REF:0000117 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656 		JBrowse link
G TNR tenascin R acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:150,826,892...151,257,301
Ensembl chr 1:154,532,582...154,615,538 		JBrowse link
telencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 6:165,778,026...165,923,685
Ensembl chr 6:170,775,904...170,882,784 		JBrowse link
G AVPR1A arginine vasopressin receptor 1A ISO RGD PMID:11021977 RGD:2304223 NCBI chr12:25,793,633...25,803,026
Ensembl chr12:26,065,882...26,075,972 		JBrowse link
G AVPR2 arginine vasopressin receptor 2 ISO RGD PMID:11021977 RGD:2304223 NCBI chr  X:143,458,693...143,461,945
Ensembl chr  X:153,346,466...153,348,840 		JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in 		IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G CDH2 cadherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:21,210,001...21,435,919
Ensembl chr18:24,812,019...25,008,325 		JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G EMX1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr2A:72,969,693...73,030,427 JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:12571115 RGD:2290000 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006 		JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10024361 RGD:8662883 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612 		JBrowse link
G FEZF1 FEZ family zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:20431123) Ensembl
MGI		 PMID:20431123 GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GMPPA GDP-mannose pyrophosphorylase A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:106,756,115...106,764,280
Ensembl chr2B:225,346,029...225,354,116 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:18579678)
(PMID:20431123) 		MGI PMID:18579678 PMID:20431123 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983) MGI PMID:19036983 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:17928865) MGI PMID:17928865 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NKX2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:18786356) MGI PMID:18786356
G NRGN neurogranin ISO RGD PMID:8783271 RGD:9835396 NCBI chr11:119,566,934...119,574,248 JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:11021977 RGD:2304223 NCBI chr 3:8,701,344...8,721,706 JBrowse link
G PFDN1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chr 5:135,611,791...135,669,895
Ensembl chr 5:141,729,128...141,786,822 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:143,900,029...143,915,391
Ensembl chr  X:153,772,700...153,786,167 		JBrowse link
G RFX4 regulatory factor X4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:104,152,816...104,330,383
Ensembl chr12:107,550,254...107,724,623 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chr 3:38,444,421...38,546,364
Ensembl chr 3:38,728,897...38,812,202 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within
involved_in 		ISO (PMID:18094027)
(PMID:18694563) 		MGI
UniProt		 PMID:18094027 PMID:18694563 NCBI chr2A:45,038,634...45,072,867 JBrowse link
G SLC1A2 solute carrier family 1 member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:35,223,811...35,392,799
Ensembl chr11:35,107,920...35,265,878 		JBrowse link
G SLC8A1 solute carrier family 8 member A1 ISO RGD PMID:12502534 RGD:2316981 NCBI chr2A:40,169,339...40,586,546
Ensembl chr2A:40,939,900...41,363,038 		JBrowse link
G SLC8A2 solute carrier family 8 member A2 ISO RGD PMID:12502534 RGD:2316981 NCBI chr19:44,420,146...44,464,242
Ensembl chr19:53,077,857...53,113,830 		JBrowse link
G SLC8A3 solute carrier family 8 member A3 ISO RGD PMID:11036162 RGD:2316983 NCBI chr14:50,634,091...50,779,712 JBrowse link
G TCTN1 tectonic family member 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:108,182,496...108,232,202
Ensembl chr12:111,577,755...111,610,754 		JBrowse link
telencephalon regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752 		JBrowse link
G GSX2 GS homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G LHX2 LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:26166575) MGI PMID:26166575 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA 		RGD
Ensembl		 PMID:9811591 GO_REF:0000107 RGD:2306311 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:18694563) UniProt PMID:18694563 NCBI chr2A:45,038,634...45,072,867 JBrowse link
thalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (PMID:23527305) MGI PMID:23527305 NCBI chr19:38,854,243...38,882,034
Ensembl chr19:47,358,281...47,384,716 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:19279136) MGI PMID:19279136 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G KIAA0319 KIAA0319 ortholog acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:24,377,666...24,483,388
Ensembl chr 6:24,713,922...24,815,300 		JBrowse link
G KIF5A kinesin family member 5A ISO RGD PMID:9349526 RGD:12792964 NCBI chr12:31,340,201...31,376,849
Ensembl chr12:31,599,376...31,635,327 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15342729) MGI PMID:15342729 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:12605461 RGD:12790706 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G NCAM1 neural cell adhesion molecule 1 ISO RGD PMID:17292800 RGD:2326015 NCBI chr11:107,845,507...108,160,441
Ensembl chr11:111,925,677...112,000,401 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 acts_upstream_of_or_within ISO (PMID:11030619) MGI PMID:11030619 NCBI chr17:34,934,452...35,121,195 JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G OLIG2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:19357274) MGI PMID:19357274 NCBI chr21:19,387,860...19,391,291 JBrowse link
G PTCHD1 patched domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:15,929,619...15,991,194
Ensembl chr  X:23,305,555...23,366,273 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:10051750 RGD:10043838 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:19357274) MGI PMID:19357274 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:8770891 RGD:4892048 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
G TAL2 TAL bHLH transcription factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 9:104,947,724...104,948,050 JBrowse link
third ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:7,681,831...7,688,710
Ensembl chr17:7,669,626...7,673,834 		JBrowse link
G C10H12orf57 chromosome 10 C12orf57 homolog involved_in ISO (PMID:23453666) UniProt PMID:23453666 NCBI chr12:7,073,251...7,075,408
Ensembl chr12:6,978,576...6,990,580 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,190,415...98,212,857
Ensembl chr10:101,663,384...101,684,812 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
thyroid-stimulating hormone-secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:9463347) MGI PMID:9463347 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801 		JBrowse link
vagus nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAV2 neuron navigator 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:19,370,095...20,143,255
Ensembl chr11:19,288,598...20,055,758 		JBrowse link
vagus nerve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA4 plexin A4 acts_upstream_of_or_within ISO (PMID:15814794) MGI PMID:15814794 NCBI chr 7:124,097,028...124,621,504
Ensembl chr 7:136,643,657...136,992,405 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:20939858) MGI PMID:20939858 NCBI chr22:2,521,080...2,541,267 JBrowse link
ventral midline determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
ventral midline development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
ventral spinal cord development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G DCTN1 dynactin subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:74,428,060...74,458,574
Ensembl chr2A:75,934,752...75,953,296 		JBrowse link
G FOXP1 forkhead box P1 involved_in ISO (PMID:20711475) UniProt PMID:20711475 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:52,515,534...52,600,390
Ensembl chr 1:54,114,909...54,199,452 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:95,464,285...95,984,813
Ensembl chr 7:108,208,344...108,728,037 		JBrowse link
G VLDLR very low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:2,428,639...2,463,796
Ensembl chr 9:2,621,199...2,653,980 		JBrowse link
G VSTM5 V-set and transmembrane domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:88,840,020...88,873,107
Ensembl chr11:92,327,030...92,359,082 		JBrowse link
ventral spinal cord interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXN4 forkhead box N4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025 		JBrowse link
G GATA2 GATA binding protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G LMO4 LIM domain only 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:119,848,323...119,867,007
Ensembl chr 1:88,698,962...88,718,760 		JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471 		JBrowse link
G FOXN4 forkhead box N4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025 		JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBX1 developing brain homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:20,180,704...20,185,164
Ensembl chr11:20,092,540...20,097,727 		JBrowse link
G DMRT3 doublesex and mab-3 related transcription factor 3 acts_upstream_of_or_within ISO (PMID:22932389) MGI PMID:22932389 NCBI chr 9:786,402...801,114 JBrowse link
G EVX1 even-skipped homeobox 1 acts_upstream_of_or_within ISO (PMID:11239430) MGI PMID:11239430 NCBI chr 7:27,887,145...27,892,267
Ensembl chr 7:27,486,329...27,491,245 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15215207) MGI PMID:15215207 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G LHX3 LIM homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within ISO (PMID:9230312) MGI PMID:9230312 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:20844123) MGI PMID:20844123 NCBI chr13:93,023,958...93,269,467 JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:19684112) MGI PMID:19684112 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472 		JBrowse link
ventricular system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK8 adenylate kinase 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:103,842,850...103,995,331
Ensembl chr 9:132,473,495...132,625,313 		JBrowse link
G ANP32B acidic nuclear phosphoprotein 32 family member B acts_upstream_of_or_within ISO (PMID:21636789) MGI PMID:21636789 NCBI chr 9:69,075,972...69,108,178
Ensembl chr 9:97,207,823...97,228,542 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G CCDC134 coiled-coil domain containing 134 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:22,692,503...22,724,871
Ensembl chr22:40,778,254...40,804,191 		JBrowse link
G CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,627,551...111,653,775
Ensembl chr 1:110,791,682...110,815,421 		JBrowse link
G CENPF centromere protein F involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:190,170,414...190,231,478
Ensembl chr 1:195,024,877...195,086,518 		JBrowse link
G CORO1C coronin 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:106,220,755...106,306,098
Ensembl chr12:109,617,093...109,674,368 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:98,190,415...98,212,857
Ensembl chr10:101,663,384...101,684,812 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:53,785,727...54,210,088
Ensembl chr16:70,661,924...71,063,631 		JBrowse link
G LOC100967959 kinesin-like protein KIF27 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr 9:39,036,564...39,098,005 JBrowse link
G LOC100973318 outer dynein arm-docking complex subunit 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:27,959,535...28,133,143
Ensembl chr10:28,320,425...28,502,925 		JBrowse link
G MBOAT7 membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:51,107,197...51,121,968
Ensembl chr19:59,949,428...59,963,312 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) MGI PMID:18571096 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:41,342,530...41,576,690
Ensembl chr14:59,603,209...59,835,408 		JBrowse link
G NME5 NME/NM23 family member 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:133,493,930...133,517,906
Ensembl chr 5:139,628,678...139,651,372 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:151,419,402...151,680,769
Ensembl chr 4:163,316,396...163,487,495 		JBrowse link
G SEMA6D semaphorin 6D acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:26,135,344...26,725,571
Ensembl chr15:44,994,073...45,050,169 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:17035536) MGI PMID:17035536 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G TTN titin acts_upstream_of_or_within ISO (PMID:17360664) MGI PMID:17360664 NCBI chr2B:65,783,512...66,064,618 JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:21746835) MGI PMID:21746835 NCBI chr 3:41,152,261...41,864,865
Ensembl chr 3:41,568,907...42,121,959 		JBrowse link
G WDR89 WD repeat domain 89 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:44,170,527...44,220,090
Ensembl chr14:62,428,742...62,429,905 		JBrowse link
ventricular zone neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCT dopachrome tautomerase involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:75,590,366...75,730,956
Ensembl chr13:94,773,794...94,816,083 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in ISO (PMID:20410112) UniProt PMID:20410112 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815 		JBrowse link
vertebrate eye-specific patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699 		JBrowse link
G ITGAM integrin subunit alpha M involved_in ISO (PMID:22632727) ARUK-UCL PMID:22632727 NCBI chr16:23,634,476...23,707,147
Ensembl chr16:31,630,146...31,702,406 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:8719615) MGI PMID:8719615 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:20,818,395...20,884,053
Ensembl chr21:34,190,043...34,190,441 		JBrowse link
visceral motor neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISL1 ISL LIM homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G ISL2 ISL LIM homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:55,250,837...55,257,775
Ensembl chr15:74,843,797...74,848,635 		JBrowse link
G TBX20 T-box transcription factor 20 involved_in ISO (PMID:15843409) BHF-UCL PMID:15843409 NCBI chr 7:35,855,969...35,878,533 JBrowse link
Wnt signaling pathway involved in forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:16920270)
(PMID:14715945) 		MGI PMID:14715945 PMID:16920270 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    developmental process 6776
      anatomical structure development 6337
        system development 4412
          central nervous system development 1204
            astrocyte differentiation + 101
            brain development + 891
            central nervous system maturation + 9
            central nervous system morphogenesis + 4
            central nervous system neuron differentiation + 285
            central nervous system segmentation + 5
            establishment of blood-brain barrier + 20
            larval central nervous system remodeling 0
            microglia differentiation + 19
            oligodendrocyte differentiation + 145
            preganglionic parasympathetic fiber development + 20
            spinal cord development + 142
            ventral cord development 0
            ventral midline development + 5
            vertebrate eye-specific patterning 2
Path 2
Term Annotations click to browse term
  biological_process 19439
    developmental process 6776
      anatomical structure development 6337
        multicellular organism development 5074
          system development 4412
            nervous system development 2771
              central nervous system development 1204
                astrocyte differentiation + 101
                brain development + 891
                central nervous system maturation + 9
                central nervous system morphogenesis + 4
                central nervous system neuron differentiation + 285
                central nervous system segmentation + 5
                establishment of blood-brain barrier + 20
                larval central nervous system remodeling 0
                microglia differentiation + 19
                oligodendrocyte differentiation + 145
                preganglionic parasympathetic fiber development + 20
                spinal cord development + 142
                ventral cord development 0
                ventral midline development + 5
                vertebrate eye-specific patterning 2
paths to the root