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ONTOLOGY REPORT - ANNOTATIONS


Term:synapse assembly
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Accession:GO:0007416 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).
Synonyms:exact_synonym: synapse biogenesis;   synaptogenesis
 xref: Wikipedia:Synaptogenesis


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synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IMP RGD PMID:12799140 RGD:1299197 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Add2 adducin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5140673|PMID:21435558)
Ensembl
RGD
PMID:21435558 GO_REF:0000107 MGI:5140673 NCBI chr 4:117,691,294...117,887,556
Ensembl chr 4:117,743,710...117,882,464
JBrowse link
G Adgrf1 adhesion G protein-coupled receptor F1 acts_upstream_of_or_within ISO MGI:4362398 (MGI:5883674|PMID:27759003) RGD PMID:27759003 MGI:5883674 NCBI chr 9:20,343,730...20,378,686 JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5688833|PMID:22405201)
PMID:21873635
UniProt
RGD
PMID:22405201, PMID:21873635 GO_REF:0000024 MGI:5688833, RGD:13792537 NCBI chr14:28,362,176...29,226,085
Ensembl chr14:28,393,394...28,967,980
JBrowse link
G Agrn agrin IMP RGD PMID:12486121 RGD:1578367 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:116,873,721...116,965,396
Ensembl chr 8:116,873,721...116,965,396
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856211|MGI:2181384 (MGI:1337561|PMID:10336181), (MGI:3042538|PMID:14973254) RGD PMID:10336181 PMID:14973254 MGI:1337561 MGI:3042538 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Cadm1 cell adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2385986|PMID:12202822)
(MGI:4879065|PMID:21145003)
RGD PMID:12202822 PMID:21145003 MGI:2385986 MGI:4879065 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Cdh1 cadherin 1 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12123610, PMID:21873635 RGD:632466, RGD:13792537 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdh2 cadherin 2 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12125071, PMID:21873635 RGD:632477, RGD:13792537 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cdh9 cadherin 9 involved_in IMP
ISO
PMID:21867881
(MGI:5914212|PMID:21867881)
RGD PMID:21867881, PMID:21867881 MGI:5914212, RGD:13432233 NCBI chr 2:66,938,796...67,078,897
Ensembl chr 2:66,940,057...67,078,784
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO (MGI:4941854|PMID:18054859) RGD PMID:18054859 MGI:4941854 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5521290 (MGI:5516394|PMID:24094106)
Ensembl
RGD
PMID:24094106 GO_REF:0000107 MGI:5516394 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (MGI:4837546|PMID:21041412) RGD PMID:21041412 MGI:4837546 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Dbnl drebrin-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5486540|PMID:18829961)
UniProt
RGD
PMID:18829961 GO_REF:0000024 MGI:5486540 NCBI chr14:86,029,335...86,044,364
Ensembl chr14:86,029,335...86,044,364
JBrowse link
G Dnm3 dynamin 3 involved_in IDA PMID:15741233 UniProt PMID:15741233 RGD:8554738 NCBI chr13:79,906,711...80,379,967
Ensembl chr13:79,910,382...80,379,929
JBrowse link
G Drd1 dopamine receptor D1 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Dscam DS cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:4443139|PMID:20393464)
Ensembl
RGD
PMID:20393464 GO_REF:0000107 MGI:4443139 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in NAS PMID:12163476 UniProt PMID:12163476 RGD:1299401 NCBI chr16:3,258,580...4,283,592
Ensembl chr16:3,293,599...3,679,222
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP PMID:23209303 UniProt PMID:23209303 RGD:8554251 NCBI chr15:106,375,298...106,625,837
Ensembl chr15:106,434,177...106,625,837
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5688833|PMID:22405201)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22405201 GO_REF:0000024 GO_REF:0000107 MGI:5688833 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654
JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:3654563 NCBI chr 5:47,819,484...47,841,138
Ensembl chr 5:47,835,066...47,836,586
JBrowse link
G Glra2 glycine receptor, alpha 2 IEP RGD PMID:1645300 RGD:728718 NCBI chr  X:30,612,894...30,832,078
Ensembl chr  X:30,612,903...30,831,483
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:57,614,813...57,640,524
Ensembl chr19:57,614,628...57,640,726
JBrowse link
G Gphn gephyrin IEP RGD PMID:9130666 RGD:1599855 NCBI chr 6:101,327,874...101,859,169
Ensembl chr 6:101,532,518...101,859,164
JBrowse link
G Gpm6a glycoprotein m6a involved_in IDA PMID:19737934 UniProt PMID:19737934 RGD:8554345 NCBI chr16:39,367,697...39,719,292
Ensembl chr16:39,367,692...39,719,187
JBrowse link
G Igfn1 immunoglobulin-like and fibronectin type III domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,791,188...52,823,037
Ensembl chr13:52,791,606...52,834,134
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in IBA
ISO
PMID:21873635
(MGI:5705162|PMID:26575286)
RGD PMID:26575286, PMID:21873635 MGI:5705162, RGD:13792537 NCBI chr 8:35,692,525...36,254,755
Ensembl chr 8:36,125,999...36,254,753
JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:17151949 RGD:2304009 NCBI chr 2:29,675,391...29,768,750
Ensembl chr 2:29,675,391...29,768,750
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO (PMID:26704708) RGD PMID:26704708 NCBI chr10:92,289,002...92,386,517
Ensembl chr10:92,288,910...92,386,517
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137311|MGI:2183727 (MGI:3762433|PMID:17920015), (MGI:3794248|PMID:18295506)
Ensembl
RGD
PMID:17920015 PMID:18295506 GO_REF:0000107 MGI:3762433 MGI:3794248 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO MGI:1856555 (MGI:3527915|PMID:15657400) RGD PMID:15657400 MGI:3527915 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
ISS
PMID:15797875
(MGI:3694190|PMID:10892652)
GO_REF:0000024
RGD
UniProt
PMID:10892652, PMID:15797875 GO_REF:0000024 MGI:3694190, RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within
involved_in
ISO MGI:1928831 (MGI:1352924|PMID:10707974)
(MGI:4443139|PMID:20393464)
RGD PMID:10707974 PMID:20393464 MGI:1352924 MGI:4443139 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1096362|MGI:1096389 (MGI:3040168|PMID:12827191)
BHF-UCL
RGD
PMID:12827191 GO_REF:0000024 MGI:3040168 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1096389|MGI:1096391 (MGI:3040168|PMID:12827191)
BHF-UCL
RGD
PMID:12827191 GO_REF:0000024 MGI:3040168 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
G Nrxn3 neurexin 3 acts_upstream_of_or_within ISO MGI:1096362|MGI:1096391 (MGI:3040168|PMID:12827191) RGD PMID:12827191 MGI:3040168 NCBI chr 6:112,133,204...114,069,589
Ensembl chr 6:112,133,204...114,067,564
JBrowse link
G Obsl1 obscurin like cytoskeletal adaptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:82,673,871...82,699,577
Ensembl chr 9:82,680,384...82,699,551
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:16,454,904...17,058,921
Ensembl chr 4:16,454,904...17,058,921
JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Plxnd1 plexin D1 involved_in ISO (MGI:5311980|PMID:22179111) RGD PMID:22179111 MGI:5311980 NCBI chr 4:147,854,309...147,894,170
Ensembl chr 4:147,854,309...147,893,992
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) RGD PMID:16675393 MGI:3629385 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:26021297) RGD PMID:26021297 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IBA
ISO
PMID:21873635
(MGI:5693671|PMID:26287463)
RGD PMID:26287463, PMID:21873635 MGI:5693671, RGD:13792537 NCBI chr10:102,299,593...102,576,554
Ensembl chr10:102,303,028...102,576,878
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5432970|PMID:22699620)
BHF-UCL
RGD
PMID:22699620 GO_REF:0000024 MGI:5432970 NCBI chr 1:217,149,156...217,593,950
Ensembl chr 1:217,151,166...217,592,763
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4948759|PMID:21423165)
BHF-UCL
RGD
PMID:21423165 GO_REF:0000024 MGI:4948759 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6118180 (MGI:5905075|PMID:28376086) RGD PMID:28376086 MGI:5905075 NCBI chr18:24,369,104...24,397,412
Ensembl chr18:24,369,125...24,397,551
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:27273464) RGD PMID:27273464 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (MGI:5513052|PMID:23543054)
(PMID:23543054)
RGD PMID:23543054 MGI:5513052 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4127354 (MGI:4438955|PMID:20231455)
Ensembl
RGD
PMID:20231455 GO_REF:0000107 MGI:4438955 NCBI chr 1:219,964,429...220,006,811
Ensembl chr 1:219,964,429...220,005,068
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:6189342|PMID:26521016) RGD PMID:26521016 MGI:6189342 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27418511)
Ensembl
RGD
PMID:27418511 GO_REF:0000107 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3664681|PMID:16980967)
PMID:21873635
RGD PMID:16980967, PMID:21873635 MGI:3664681, RGD:13792537 NCBI chr 4:56,110,658...56,114,254
Ensembl chr 4:56,110,658...56,114,254
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5780536|PMID:22960622), (MGI:5908777|PMID:26440732) RGD PMID:22960622 PMID:26440732 MGI:5780536 MGI:5908777 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within ISO MGI:5621191 (MGI:5581388|PMID:24554721) RGD PMID:24554721 MGI:5581388 NCBI chr 8:63,379,062...63,445,694
Ensembl chr 8:63,379,087...63,445,686
JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 7:130,135,484...130,161,568
Ensembl chr 7:130,135,464...130,151,880
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5284797|PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 GO_REF:0000024 GO_REF:0000107 MGI:5284797 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5285129|PMID:21424692)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
ISO
GO_REF:0000024
(MGI:5586946|PMID:25025157)
UniProt
RGD
PMID:25025157 GO_REF:0000024 MGI:5586946 NCBI chr 3:8,656,397...8,659,102
Ensembl chr 3:8,656,412...8,659,102
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in ISO (MGI:6280523|PMID:30679375), (MGI:6383349|PMID:25534236) RGD PMID:25534236 PMID:30679375 MGI:6280523 MGI:6383349 NCBI chr 3:170,033,166...170,040,953
Ensembl chr 3:170,033,166...170,040,953
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
GO_REF:0000024
(MGI:6280523|PMID:30679375)
UniProt
RGD
PMID:30679375 GO_REF:0000024 MGI:6280523 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6208009|PMID:27129275)
(PMID:23909897), (PMID:25489750)
UniProt
RGD
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 MGI:6208009 NCBI chr10:27,310,718...27,371,802
Ensembl chr10:27,310,725...27,366,665
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr14:39,662,411...39,801,082
Ensembl chr14:39,661,968...39,798,302
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO
ISS
(PMID:23909897), (PMID:25489750)
(MGI:6208009|PMID:27129275)
GO_REF:0000024
RGD
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 MGI:6208009 NCBI chr10:27,973,694...28,193,072
Ensembl chr10:27,973,681...28,187,565
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO
IEA
ISS
(PMID:25489750)
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6208009|PMID:27129275)
GO_REF:0000024
(PMID:23909897), (PMID:25489750)
Ensembl
RGD
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 MGI:6208009 NCBI chr10:27,090,913...27,179,786
Ensembl chr10:27,092,827...27,179,900
JBrowse link
G Lgi2 leucine-rich repeat LGI family, member 2 involved_in ISO
IBA
(MGI:6280523|PMID:30679375)
PMID:21873635
RGD PMID:30679375, PMID:21873635 MGI:6280523, RGD:13792537 NCBI chr14:60,764,325...60,791,809
Ensembl chr14:60,764,409...60,796,116
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5780536|PMID:22960622)
Ensembl
RGD
PMID:22960622 GO_REF:0000107 MGI:5780536 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826741|PMID:18815592)
UniProt
RGD
PMID:18815592 GO_REF:0000024 MGI:3826741 NCBI chr 1:220,260,310...220,278,177
Ensembl chr 1:220,261,008...220,265,772
JBrowse link
G Plxnb1 plexin B1 involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr 8:117,832,826...117,858,515
Ensembl chr 8:117,836,701...117,856,689
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
GO_REF:0000024
(MGI:5707148|PMID:24467251)
UniProt
RGD
PMID:24467251 GO_REF:0000024 MGI:5707148 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:6274944|PMID:29643768) RGD PMID:29643768 MGI:6274944 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in ISO (MGI:5426777|PMID:19036963) RGD PMID:19036963 MGI:5426777 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (MGI:3056242|PMID:15378065) RGD PMID:15378065 MGI:3056242 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5307186|PMID:22198949) RGD PMID:22198949 MGI:5307186 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(MGI:4820709|PMID:18986540)
Ensembl
RGD
PMID:18986540 GO_REF:0000107 MGI:4820709 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) RGD PMID:20534458 MGI:4457945 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285129|PMID:21424692)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21424692 GO_REF:0000024 GO_REF:0000107 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5800585|PMID:27683913)
UniProt
RGD
PMID:27683913 GO_REF:0000024 MGI:5800585 NCBI chr 8:13,796,009...13,816,125
Ensembl chr 8:13,796,021...13,816,109
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) RGD PMID:21670302 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in ISO (MGI:6269924|PMID:29981480) RGD PMID:29981480 MGI:6269924 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997
JBrowse link
G Sema4d semaphorin 4D involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) RGD PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:148,168,530...148,231,587
Ensembl chr 5:148,193,710...148,231,587
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 9:31,280,623...32,022,535
Ensembl chr 9:31,281,316...32,019,205
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:24,854,981...24,875,712
Ensembl chr19:24,855,299...24,875,137
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr19:25,029,037...25,069,146
Ensembl chr19:25,029,037...25,069,142
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 2:258,792,838...258,997,145
Ensembl chr 2:258,792,839...258,997,145
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr14:28,362,176...29,226,085
Ensembl chr14:28,393,394...28,967,980
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:164,937,188...164,964,819
Ensembl chr 3:164,937,198...164,964,702
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:210,977,125...210,982,582
Ensembl chr 2:210,977,938...210,982,579
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 7:138,704,124...138,707,221
Ensembl chr 7:138,704,126...138,707,221
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:116,830,773...116,832,299 JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:3851850|PMID:19571134)
Ensembl
RGD
PMID:19571134 GO_REF:0000107 MGI:3851850 NCBI chr10:68,247,800...69,347,223
Ensembl chr10:68,248,655...68,517,564
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bhlhb9 basic helix-loop-helix family member B9 involved_in ISO (MGI:5545985|PMID:21199326) RGD PMID:21199326 MGI:5545985 NCBI chr  X:106,359,981...106,393,457
Ensembl chr  X:106,390,759...106,393,459
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within ISO MGI:1096391 (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (MGI:5002432|PMID:21356198) RGD PMID:21356198 MGI:5002432 NCBI chr18:83,775,568...83,783,841
Ensembl chr18:83,777,665...83,782,930
JBrowse link
G Clstn1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1929897|MGI:2178323 (MGI:5576449|PMID:24613359)
RGD PMID:24613359, PMID:21873635 MGI:5576449, RGD:13792537 NCBI chr 5:166,533,262...166,601,686
Ensembl chr 5:166,533,181...166,601,684
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:1929895|MGI:2178323 (MGI:5576449|PMID:24613359)
PMID:21873635
Ensembl
RGD
PMID:24613359, PMID:21873635 GO_REF:0000107 MGI:5576449, RGD:13792537 NCBI chr 8:105,322,577...106,036,821
Ensembl chr 8:105,323,837...105,462,168
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:1929895|MGI:1929897 (MGI:5576449|PMID:24613359)
GO_REF:0000107
RGD
Ensembl
PMID:24613359, PMID:21873635 GO_REF:0000107 MGI:5576449, RGD:13792537 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (MGI:4836115|PMID:20510857) RGD PMID:20510857 MGI:4836115 NCBI chr12:40,016,774...40,221,067
Ensembl chr12:40,018,937...40,219,291
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (MGI:5608921|PMID:25232112) RGD PMID:25232112 MGI:5608921 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5426777|PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 MGI:5426777 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2683349|PMID:14691139)
UniProt
RGD
PMID:14691139 GO_REF:0000024 MGI:2683349 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:2683349|PMID:14691139), (MGI:4881358|PMID:21029865) RGD PMID:14691139 PMID:21029865 MGI:2683349 MGI:4881358 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:2683349|PMID:14691139) RGD PMID:14691139 MGI:2683349 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:222,340,481...222,417,915
Ensembl chr 1:222,344,713...222,350,173
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 6:119,518,459...119,613,534
Ensembl chr 6:119,519,714...119,609,296
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO MGI:3045041 (MGI:3620293|PMID:16491079)
(PMID:16491079)
RGD PMID:16491079 MGI:3620293 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27418511)
Ensembl
RGD
PMID:27418511 GO_REF:0000107 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(MGI:5645611|PMID:25908590)
(MGI:5315316|PMID:22357843)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22357843 PMID:25908590 GO_REF:0000024 GO_REF:0000107 MGI:5315316 MGI:5645611 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5645611|PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 MGI:5645611 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 5:51,466,367...51,638,161 JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:195,617,044...195,643,502
Ensembl chr 2:195,617,044...195,643,502
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 7:117,779,733...117,786,872
Ensembl chr 7:117,779,620...117,786,872
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO
IBA
(MGI:5294265|PMID:21940441)
PMID:21873635
RGD PMID:21940441, PMID:21873635 MGI:5294265, RGD:13792537 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:139,633,310...139,679,730
Ensembl chr 4:139,670,092...139,673,143
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 6:61,374,328...61,405,195
Ensembl chr 6:61,374,328...61,405,195
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr18:28,012,877...28,017,925
Ensembl chr18:28,012,877...28,017,925
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr20:25,990,304...26,163,656
Ensembl chr20:25,990,304...26,163,656
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr16:4,993,728...5,005,110
Ensembl chr16:4,997,461...5,003,066
JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 4:151,375,568...151,397,485
Ensembl chr 4:151,375,572...151,390,263
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:17582332
(PMID:24613359)
(MGI:5002432|PMID:21356198)
PMID:15797875
RGD PMID:21356198 PMID:24613359, PMID:17582332, PMID:15797875 MGI:5002432, RGD:8553502, RGD:8554205 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(MGI:5320268|PMID:21642956)
RGD PMID:21642956, PMID:15797875 MGI:5320268, RGD:8554205 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
TAS
GO_REF:0000024
MGI:88281|MGI:88282 (MGI:5002432|PMID:21356198)
PMID:15797875
BHF-UCL
RGD
PMID:21356198, PMID:15797875 GO_REF:0000024 MGI:5002432, RGD:8554205 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5645611|PMID:25908590), (MGI:5902672|PMID:25989451) RGD PMID:25908590 PMID:25989451 MGI:5645611 MGI:5902672 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5576449|PMID:24613359)
(MGI:5902672|PMID:25989451)
RGD PMID:24613359 PMID:25989451 MGI:5576449 MGI:5902672 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 2:170,446,582...170,461,513
Ensembl chr 2:170,452,702...170,460,754
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr  X:147,582,195...147,589,529 JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:96,817,907...96,826,760
Ensembl chr15:96,821,832...96,826,653
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IDA
(PMID:24179158) RGD PMID:24179158, PMID:24179158 RGD:8553698 NCBI chr  X:104,734,035...104,760,658
Ensembl chr  X:104,734,082...104,760,547
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:2,257,910...2,497,429 JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IBA
IMP
(PMID:20152115)
PMID:21873635
(MGI:4439218|PMID:20152115)
RGD PMID:20152115, PMID:21873635, PMID:20152115 MGI:4439218, RGD:13792537, RGD:8554654 NCBI chr 3:145,031,427...145,199,273
Ensembl chr 3:145,032,200...145,199,356
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (MGI:5576449|PMID:24613359) RGD PMID:24613359 MGI:5576449 NCBI chr 8:93,491,761...93,495,132
Ensembl chr 8:93,491,761...93,495,130
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:18986540)
(MGI:1195230|PMID:9405095)
RGD PMID:9405095 PMID:18986540 MGI:1195230 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(MGI:1337916|PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 MGI:1337916 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4948759|PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 MGI:4948759 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,134,021...7,141,522
Ensembl chr 3:7,134,021...7,141,522
JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP
IDA
PMID:11136979 SynGO PMID:11136979, PMID:11136979 RGD:13702452, RGD:13702452 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977)
UniProt
RGD
PMID:22038977 GO_REF:0000024 MGI:5295488 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Nlgn1 neuroligin 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359)
GO_REF:0000024
RGD
BHF-UCL
PMID:12796785 PMID:15620359, PMID:21873635 GO_REF:0000024 MGI:2665153 MGI:5284797, RGD:13792537 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:5284797|PMID:15620359)
GO_REF:0000107
PMID:21873635
BHF-UCL
RGD
Ensembl
PMID:15620359, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5284797, RGD:13792537 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5320268|PMID:21642956)
GO_REF:0000024
RGD
BHF-UCL
PMID:21642956, PMID:21873635 GO_REF:0000024 MGI:5320268, RGD:13792537 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359 PMID:21424692 GO_REF:0000024 MGI:5284797 MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:4411943|PMID:19755106), (MGI:5284797|PMID:15620359) RGD PMID:15620359 PMID:19755106 MGI:4411943 MGI:5284797 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (MGI:2385986|PMID:12202822) RGD PMID:12202822 MGI:2385986 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Cntn5 contactin 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5635777|PMID:24411736)
Ensembl
RGD
PMID:24411736 GO_REF:0000107 MGI:5635777 NCBI chr 8:7,812,371...9,033,962
Ensembl chr 8:7,814,895...8,524,643
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (MGI:3653273|PMID:16818724) RGD PMID:16818724 MGI:3653273 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Efnb1 ephrin B1 involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143, PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr  X:68,891,227...68,904,034
Ensembl chr  X:68,891,227...68,904,038
JBrowse link
G Efnb2 ephrin B2 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143, PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr16:86,631,151...86,672,050
Ensembl chr16:86,631,064...86,675,049
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IDA
EXP
IMP
PMID:20530549 SynGO PMID:20530549, PMID:20530549, PMID:20530549 RGD:13702329, RGD:13702329, RGD:13702329 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) RGD PMID:26776509 NCBI chr20:25,990,304...26,163,656
Ensembl chr20:25,990,304...26,163,656
JBrowse link
G Nrxn1 neurexin 1 involved_in IMP
IDA
EXP
PMID:12796785 SynGO PMID:12796785, PMID:12796785, PMID:12796785 RGD:13702298, RGD:13702298, RGD:13702298 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Sdcbp syndecan binding protein involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143, PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IDA
IBA
PMID:22875941
PMID:21873635
UniProt
GO_Central
PMID:22875941, PMID:21873635 RGD:14390063, RGD:13792537 NCBI chr 8:116,873,721...116,965,396
Ensembl chr 8:116,873,721...116,965,396
JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (MGI:5514320|PMID:23684785) RGD PMID:23684785 MGI:5514320 NCBI chr15:67,555,835...67,647,990
Ensembl chr15:67,555,835...67,645,088
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IBA
IDA
PMID:21873635
PMID:22875941
GO_Central
UniProt
PMID:21873635, PMID:22875941 RGD:13792537, RGD:14390063 NCBI chr 4:16,454,904...17,058,921
Ensembl chr 4:16,454,904...17,058,921
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,134,021...7,141,522
Ensembl chr 3:7,134,021...7,141,522
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (MGI:5294265|PMID:21940441) RGD PMID:21940441 MGI:5294265 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977)
UniProt
RGD
PMID:22038977 GO_REF:0000024 MGI:5295488 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IBA
PMID:19730411
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652), (MGI:5284797|PMID:15620359)
PMID:15797875
PMID:21873635
RGD PMID:10892652 PMID:12796785 PMID:15620359, PMID:19730411, PMID:15797875, PMID:21873635 MGI:2665153 MGI:3694190 MGI:5284797, RGD:8554379, RGD:8554205, RGD:13792537 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nlgn2 neuroligin 2 involved_in IBA
ISO
IEA
IDA
PMID:21873635
(MGI:4352827|PMID:19016888), (MGI:5284797|PMID:15620359)
GO_REF:0000107
PMID:15797875
RGD
Ensembl
PMID:15620359 PMID:19016888, PMID:21873635, PMID:15797875 GO_REF:0000107 MGI:4352827 MGI:5284797, RGD:13792537, RGD:8554205 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
IBA
PMID:15797875
PMID:21873635
BHF-UCL
GO_Central
PMID:15797875, PMID:21873635 RGD:8554205, RGD:13792537 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) RGD PMID:18082964 MGI:3772418 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (MGI:5294265|PMID:21940441) RGD PMID:21940441 MGI:5294265 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6201911|PMID:29742426)
UniProt
RGD
PMID:29742426 GO_REF:0000024 MGI:6201911 NCBI chr 4:145,117,533...145,147,397
Ensembl chr 4:145,117,533...145,147,397
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510) RGD PMID:20395510 MGI:4441214 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4441214|PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 MGI:4441214 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835, PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:85,290,887...85,308,498
Ensembl chr 1:85,291,462...85,300,825
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
IMP
IDA
PMID:21873635
PMID:20410109
GO_Central
SynGO
PMID:21873635, PMID:20410109, PMID:20410109 RGD:13792537, RGD:13702463, RGD:13702463 NCBI chr 1:219,850,037...219,855,771
Ensembl chr 1:219,850,037...219,853,329
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495, PMID:21873635, PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:28,012,877...28,017,925
Ensembl chr18:28,012,877...28,017,925
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in IDA
EXP
IMP
PMID:29024665 SynGO PMID:29024665, PMID:29024665, PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:108,682,637...108,691,592
Ensembl chr10:108,682,638...108,691,367
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5294741|PMID:21410790) RGD PMID:21410790 MGI:5294741 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in EXP
IDA
PMID:21262467 SynGO PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in EXP
ISO
IDA
PMID:29024665
(MGI:5315316|PMID:22357843)
RGD PMID:22357843, PMID:29024665, PMID:29024665 MGI:5315316, RGD:13702141, RGD:13702141 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IMP
EXP
IEA
PMID:21262467
(MGI:4887276|PMID:21262467)
GO_REF:0000107
RGD
Ensembl
PMID:21262467, PMID:21262467, PMID:21262467, PMID:21262467 GO_REF:0000107 MGI:4887276, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259, PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:106,052,212...106,163,249
Ensembl chr 6:106,039,991...106,163,302
JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in ISO (MGI:3722960|PMID:17690689) RGD PMID:17690689 MGI:3722960 NCBI chr  X:64,249,576...64,428,444
Ensembl chr  X:64,248,278...64,428,592
JBrowse link
G Gap43 growth associated protein 43 involved_in IDA
IMP
PMID:25755278 SynGO PMID:25755278, PMID:25755278 RGD:13702431, RGD:13702431 NCBI chr11:58,624,198...58,717,916
Ensembl chr11:58,624,198...58,717,914
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (MGI:6189241|PMID:27986928) RGD PMID:27986928 MGI:6189241 NCBI chr 7:121,011,678...121,029,754
Ensembl chr 7:121,011,680...121,029,754
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IDA
IMP
PMID:16394100 SynGO PMID:16394100, PMID:16394100 RGD:2302413, RGD:2302413 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:19726636) RGD PMID:19726636 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654, PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (MGI:4441214|PMID:20395510), (MGI:5294741|PMID:21410790) RGD PMID:20395510 PMID:21410790 MGI:4441214 MGI:5294741 NCBI chr19:20,607,507...20,611,316
Ensembl chr19:20,607,507...20,611,316
JBrowse link
G Cbln2 cerebellin 2 precursor involved_in ISO (MGI:5294741|PMID:21410790) RGD PMID:21410790 MGI:5294741 NCBI chr18:83,775,568...83,783,841
Ensembl chr18:83,777,665...83,782,930
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5576449|PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 MGI:5576449 NCBI chr 4:157,044,736...157,078,013
Ensembl chr 4:157,043,925...157,078,130
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303, PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:106,375,298...106,625,837
Ensembl chr15:106,434,177...106,625,837
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6189468|PMID:19883499)
Ensembl
RGD
PMID:19883499 GO_REF:0000107 MGI:6189468 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
PMID:21873635
SynGO
GO_Central
PMID:23911103, PMID:21873635, PMID:23911103 RGD:13702303, RGD:13792537, RGD:13702303 NCBI chr  X:139,354,325...139,464,876
Ensembl chr  X:139,354,155...139,464,798
JBrowse link
G Gpc6 glypican 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:102,164,091...103,174,721
Ensembl chr15:102,164,751...103,170,847
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790, PMID:21410790, PMID:20395510, PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:77,456,648...77,593,208
Ensembl chr11:77,463,954...77,593,207
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:55,439,388...57,004,865
Ensembl chr  X:55,439,578...56,765,893
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:108,287,034...109,851,075
Ensembl chr  X:108,287,068...109,851,047
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238, PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:88,819,439...88,827,002
Ensembl chr 1:88,819,445...88,826,302
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109, PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 1:219,850,037...219,855,771
Ensembl chr 1:219,850,037...219,853,329
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109, PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 6:83,082,593...83,438,601
Ensembl chr 6:83,083,740...83,438,601
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495, PMID:21873635, PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:100,434,418...100,468,914
Ensembl chr 1:100,447,998...100,468,868
JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470, PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:108,300,927...108,316,373
Ensembl chr 4:108,301,129...108,316,373
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:8,515,142...8,574,632
Ensembl chr20:8,515,142...8,574,082
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (MGI:6109768|PMID:27608760) RGD PMID:27608760 MGI:6109768 NCBI chr 6:88,442,620...89,292,454
Ensembl chr 6:88,447,749...88,917,070
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652, PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5294741|PMID:21410790), (MGI:6189347|PMID:17360903) RGD PMID:17360903 PMID:21410790 MGI:5294741 MGI:6189347 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr 5:92,862,229...93,514,071
Ensembl chr 5:92,862,267...93,244,202
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in EXP
IDA
IMP
PMID:21262467 SynGO PMID:21262467, PMID:21262467, PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:93,303,382...93,307,420
Ensembl chr15:93,303,382...93,307,420
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:151,099,388...151,111,816
Ensembl chr  X:151,103,576...151,107,016
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(MGI:5776681|PMID:22286174)
RGD PMID:22286174 PMID:23345436 MGI:5776681 NCBI chr 2:170,446,582...170,461,513
Ensembl chr 2:170,452,702...170,460,754
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:96,817,907...96,826,760
Ensembl chr15:96,821,832...96,826,653
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Snca synuclein alpha involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:20530549) RGD PMID:20530549 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in IMP
IDA
PMID:23595754 SynGO PMID:23595754, PMID:23595754 RGD:13831359, RGD:13831359 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (MGI:3699474|PMID:17301182) RGD PMID:17301182 MGI:3699474 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:3693132|PMID:17122040) RGD PMID:17122040 MGI:3693132 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within ISO MGI:3040440 (MGI:3696310|PMID:17060947) RGD PMID:17060947 MGI:3696310 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2655232|MGI:2655237 (MGI:2654367|PMID:12657691) RGD PMID:12657691 MGI:2654367 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (MGI:5515243|PMID:23911103) RGD PMID:23911103 MGI:5515243 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3804504|PMID:18599438) RGD PMID:18599438 MGI:3804504 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:11827984 RGD:1599809 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G Negr1 neuronal growth regulator 1 IMP RGD PMID:18602091 RGD:40886282 NCBI chr 2:262,914,240...263,650,441
Ensembl chr 2:262,914,327...263,650,441
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872, PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:28,835,391...29,015,552
Ensembl chr18:28,835,417...29,015,552
JBrowse link
G Ntn1 netrin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5538415|PMID:24174661)
Ensembl
RGD
PMID:24174661 GO_REF:0000107 MGI:5538415 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:247,815,214...247,989,198
Ensembl chr 2:247,818,243...247,988,462
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5487509|PMID:22291024) RGD PMID:22291024 MGI:5487509 NCBI chr 9:98,118,907...98,131,883
Ensembl chr 9:98,118,908...98,131,883
JBrowse link
G Setd5 SET domain containing 5 involved_in ISO (MGI:6381850|PMID:31515109) RGD PMID:31515109 MGI:6381850 NCBI chr 4:145,017,549...145,095,247
Ensembl chr 4:145,017,608...145,095,245
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:129,697,408...129,788,417
Ensembl chr 3:129,599,353...129,788,400
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin acts_upstream_of_or_within ISO MGI:2136176 (MGI:1891559|PMID:11018052) RGD PMID:11018052 MGI:1891559 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857733 (MGI:4431306|PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 MGI:4431306 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1929066 (MGI:80613|PMID:8653786)
UniProt
RGD
PMID:8653786 GO_REF:0000024 MGI:80613 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:106034 (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
synapse assembly involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3849742 (MGI:3849342|PMID:19398581)
RGD PMID:19398581, PMID:21873635 MGI:3849342, RGD:13792537 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within ISO MGI:88047 (MGI:3577153|PMID:15689559) RGD PMID:15689559 MGI:3577153 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:3829843|PMID:18957220)
MGI:2661383|MGI:3580702 (MGI:3703100|PMID:17119023)
UniProt
RGD
PMID:17119023 PMID:18957220 GO_REF:0000024 MGI:3703100 MGI:3829843 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    multicellular organismal process 8921
      multicellular organism development 5744
        system development 5287
          nervous system development 2716
            synapse assembly 195
              excitatory synapse assembly + 27
              inhibitory synapse assembly + 15
              negative regulation of synapse assembly + 9
              positive regulation of synapse assembly + 78
              postsynapse assembly + 32
              presynapse assembly + 52
              regulation of synapse assembly + 122
              synapse assembly involved in innervation 1
              synaptic assembly at neuromuscular junction + 8
Path 2
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component organization 6479
          cellular component assembly 2986
            cell junction assembly 458
              synapse assembly 195
                excitatory synapse assembly + 27
                inhibitory synapse assembly + 15
                negative regulation of synapse assembly + 9
                positive regulation of synapse assembly + 78
                postsynapse assembly + 32
                presynapse assembly + 52
                regulation of synapse assembly + 122
                synapse assembly involved in innervation 1
                synaptic assembly at neuromuscular junction + 8
paths to the root