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ONTOLOGY REPORT - ANNOTATIONS

Term:pattern specification process
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Accession:GO:0007389 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
Synonyms:related_synonym: pattern biosynthesis;   pattern formation


show annotations for term's descendants           Sort by:
pattern specification process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:17849440) Ensembl
GO_Central
MGI		 PMID:17849440 GO_REF:0000033 GO_REF:0000107 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ALX3 ALX homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr 4:110,047,254...110,058,205
Ensembl chr 4:110,047,116...110,057,872 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:16740478) MGI PMID:16740478 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930101) Ensembl
MGI		 PMID:15930101 GO_REF:0000107 NCBI chr 5:81,357,431...81,360,335
Ensembl chr 5:81,358,969...81,359,673 		JBrowse link
G ASPH aspartate beta-hydroxylase acts_upstream_of_or_within ISO (PMID:11773073) MGI PMID:11773073 NCBI chr 4:71,902,891...72,107,047
Ensembl chr 4:71,903,318...72,107,044 		JBrowse link
G BMP5 bone morphogenetic protein 5 acts_upstream_of_or_within ISO (PMID:1339316) MGI PMID:1339316 NCBI chr 7:25,344,924...25,468,430
Ensembl chr 7:25,344,822...25,470,470 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7590254) Ensembl
MGI		 PMID:7590254 GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716346) Ensembl
MGI		 PMID:15716346 GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19004860) Ensembl
MGI		 PMID:19004860 GO_REF:0000107 NCBI chr 9:8,393,610...8,512,843
Ensembl chr 9:8,393,612...8,512,848 		JBrowse link
G CDX1 caudal type homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11959827) Ensembl
MGI		 PMID:11959827 GO_REF:0000107 NCBI chr 2:151,202,842...151,217,132
Ensembl chr 2:151,202,777...151,216,988 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11959827) Ensembl
MGI		 PMID:11959827 GO_REF:0000107 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057 		JBrowse link
G CHRD chordin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12397106) UniProt
MGI		 PMID:12397106 GO_REF:0000117 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645 		JBrowse link
G CRAMP1 cramped chromatin regulator homolog 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:40,257,677...40,308,034
Ensembl chr 3:40,257,685...40,308,089 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16399080) Ensembl
MGI		 PMID:16399080 GO_REF:0000107 NCBI chr14:50,528,950...50,558,664
Ensembl chr14:50,528,955...50,558,662 		JBrowse link
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26258302) Ensembl
MGI		 PMID:26258302 GO_REF:0000107 NCBI chr 9:3,099,525...3,134,825
Ensembl chr 9:3,113,451...3,134,821 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16530750)
(PMID:16916509)		 Ensembl
MGI		 PMID:16530750 PMID:16916509 GO_REF:0000107 NCBI chr 4:63,970,939...64,328,107
Ensembl chr 4:63,970,807...64,328,105 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:10498685) MGI PMID:10498685 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G FST follistatin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15525533) Ensembl
MGI		 PMID:15525533 GO_REF:0000107 NCBI chr16:32,806,341...32,811,382
Ensembl chr16:32,805,932...32,811,421 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14602680)
(PMID:8575294)		 Ensembl
MGI		 PMID:8575294 PMID:14602680 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14602680) Ensembl
MGI		 PMID:14602680 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14608380) Ensembl
MGI		 PMID:14608380 GO_REF:0000107 NCBI chr 6:82,014,022...82,050,240
Ensembl chr 6:82,013,969...82,050,236 		JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11731457), (PMID:12724834), (PMID:15930101)
(PMID:12930780)		 Ensembl
MGI		 PMID:11731457 PMID:12724834 PMID:12930780 PMID:15930101 GO_REF:0000107 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,552...40,883,995 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18302773) Ensembl
MGI		 PMID:18302773 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18302773) Ensembl
MGI		 PMID:18302773 GO_REF:0000107 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7903601)
(PMID:7903600)		 Ensembl
MGI		 PMID:7903600 PMID:7903601 GO_REF:0000107 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11900462) Ensembl
MGI		 PMID:11900462 GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:8900279) MGI PMID:8900279 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HOXD12 homeobox D12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8900279) Ensembl
MGI		 PMID:8900279 GO_REF:0000107 NCBI chr15:81,900,962...81,902,327
Ensembl chr15:81,900,833...81,902,995 		JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8900279)
(PMID:11850178)
(PMID:8106170)		 MGI
Ensembl		 PMID:8106170 PMID:8900279 PMID:11850178 GO_REF:0000107 NCBI chr15:81,893,997...81,897,965
Ensembl chr15:81,893,972...81,896,944 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9671585) Ensembl
MGI		 PMID:9671585 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:1,721,044...1,819,426
Ensembl chr 3:1,810,892...1,820,048 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930111)
(PMID:10498685)		 Ensembl
MGI		 PMID:10498685 PMID:15930111 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 acts_upstream_of_or_within ISO (PMID:1633717) MGI PMID:1633717 NCBI chr 1:176,770,045...177,595,012
Ensembl chr 1:176,770,071...177,593,876 		JBrowse link
G MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:10,319,821...10,334,500
Ensembl chr 5:10,319,816...10,344,832 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12930780) Ensembl
MGI		 PMID:12930780 GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12397106) Ensembl
MGI		 PMID:12397106 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G NRG3 neuregulin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10723730) Ensembl
MGI		 PMID:10723730 GO_REF:0000107 NCBI chr14:83,316,962...84,405,347
Ensembl chr14:83,317,019...84,402,943 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G PAX1 paired box 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11900462) Ensembl
MGI		 PMID:11900462 GO_REF:0000107 NCBI chr17:29,421,117...29,436,481
Ensembl chr17:29,422,129...29,431,990 		JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9262482) Ensembl
MGI		 PMID:9262482 GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:13970082) Ensembl
MGI		 PMID:13970082 GO_REF:0000107 NCBI chr 1:161,679,154...161,683,486
Ensembl chr 1:161,678,955...161,683,060 		JBrowse link
G RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:957,129...961,757
Ensembl chr12:957,127...960,822 		JBrowse link
G RNF111 ring finger protein 111 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11298452) Ensembl
MGI		 PMID:11298452 GO_REF:0000107 NCBI chr 1:112,961,466...113,059,606
Ensembl chr 1:112,961,468...113,059,600 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14602680)
(PMID:12231626)		 Ensembl
MGI
UniProt		 PMID:12231626 PMID:14602680 GO_REF:0000107 GO_REF:0000117 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SHROOM3 shroom family member 3 acts_upstream_of_or_within ISO (PMID:10589677) MGI PMID:10589677 NCBI chr 8:72,097,561...72,443,869 JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:16530750)
(PMID:16916509)		 UniProt
MGI
Ensembl		 PMID:16530750 PMID:16916509 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,855...189,624,651 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17849440) Ensembl
MGI		 PMID:17849440 GO_REF:0000107 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15107405) Ensembl
MGI
GO_Central		 PMID:15107405 GO_REF:0000033 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G SOSTDC1 sclerostin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16179481) Ensembl
MGI		 PMID:16179481 GO_REF:0000107 NCBI chr 9:85,743,332...85,747,893
Ensembl chr 9:85,743,341...85,747,591 		JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16452659) Ensembl
MGI		 PMID:16452659 GO_REF:0000107 NCBI chr 7:29,723,745...29,752,351
Ensembl chr 7:29,723,588...29,753,933 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15385444), (PMID:15652707)
(PMID:16399080)		 MGI PMID:15385444 PMID:15652707 PMID:16399080 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G TBX5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15289437) Ensembl
MGI		 PMID:15289437 GO_REF:0000107 NCBI chr14:37,772,205...37,826,015
Ensembl chr14:37,774,171...37,825,401 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10227294) Ensembl
MGI		 PMID:10227294 GO_REF:0000107 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068 		JBrowse link
G UNCX UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10804169)
(PMID:10804168)		 Ensembl
MGI		 PMID:10804168 PMID:10804169 GO_REF:0000107 NCBI chr 3:804,188...808,574
Ensembl chr 3:804,113...808,187 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9389660) Ensembl
MGI		 PMID:9389660 GO_REF:0000107 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205 		JBrowse link
G ZIC1 Zic family member 1 involved_in ISO (PMID:9070329) UniProt PMID:9070329 NCBI chr13:87,740,769...87,750,258
Ensembl chr13:87,745,552...87,750,192 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11959836) Ensembl
MGI		 PMID:11959836 GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKA aurora kinase A acts_upstream_of_or_within ISO (PMID:22939930) MGI PMID:22939930 NCBI chr17:56,954,838...56,972,435 JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964473) Ensembl
MGI		 PMID:10964473 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057 		JBrowse link
G CDX4 caudal type homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:59,089,131...59,100,958
Ensembl chr  X:59,091,946...59,100,431 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18241853)
(PMID:15004567)		 Ensembl
MGI		 PMID:15004567 PMID:18241853 GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G CRIPTO cripto, EGF-CFC family member acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18241853) MGI
Ensembl		 PMID:18241853 GO_REF:0000107 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10662781) Ensembl
MGI		 PMID:10662781 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,785,441...22,789,867
Ensembl chr 5:22,785,445...22,789,829 		JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964473) Ensembl
MGI		 PMID:10964473 GO_REF:0000107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,504...109,973,607 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (PMID:15680351) MGI PMID:15680351 NCBI chr 4:56,859,640...56,863,807
Ensembl chr 4:56,859,663...56,863,788 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15680351) Ensembl
MGI		 PMID:15680351 GO_REF:0000107 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490556) Ensembl
MGI		 PMID:12490556 GO_REF:0000107 NCBI chr14:113,114,302...113,126,455
Ensembl chr14:113,113,179...113,126,816 		JBrowse link
G LEFTY2 left-right determination factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:13,849,052...13,853,438
Ensembl chr10:13,848,174...13,853,438 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LOC100524517 left-right determination factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:15004567) GO_Central
MGI		 PMID:15004567 GO_REF:0000033 NCBI chr10:13,815,157...13,819,249 JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr15:100,733,552...100,820,603
Ensembl chr15:100,733,560...100,820,585 		JBrowse link
G RNF2 ring finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12183370) Ensembl
MGI		 PMID:12183370 GO_REF:0000107 NCBI chr 9:126,172,637...126,284,567
Ensembl chr 9:126,172,301...126,287,603 		JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,945...95,463,251 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:15155583) MGI PMID:15155583 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:19841259) UniProt PMID:19841259 NCBI chr 6:144,242,639...144,529,659
Ensembl chr 6:144,399,926...144,555,880 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,627,291...17,681,197
Ensembl chr12:17,628,726...17,681,026 		JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRIPTO cripto, EGF-CFC family member acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9790191) MGI
Ensembl		 PMID:9790191 GO_REF:0000107 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15870281) Ensembl
MGI		 PMID:15870281 GO_REF:0000107 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,913,990...110,921,388
Ensembl chr15:110,914,009...110,921,353 		JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,491,048...38,557,256
Ensembl chr13:38,492,472...38,557,193 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:14668413) MGI PMID:14668413 NCBI chr 3:59,438,152...59,458,988 JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2A activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10452853), (PMID:16991118) Ensembl
MGI		 PMID:10452853 PMID:16991118 GO_REF:0000107 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542835)
(PMID:10452853), (PMID:16991118)
(PMID:16845371)
(PMID:16845371), (PMID:16991118), (PMID:9242489)		 Ensembl
MGI		 PMID:9242489 PMID:10452853 PMID:15542835 PMID:16845371 PMID:16991118 GO_REF:0000107 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368932)
(PMID:15652703), (PMID:15872003)
(PMID:17067568)		 Ensembl
MGI		 PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 GO_REF:0000107 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:9847249) MGI PMID:9847249 NCBI chr 5:96,761,683...96,785,125
Ensembl chr 5:96,763,685...96,785,165 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9847249)
(PMID:9374397), (PMID:9847249)		 Ensembl
MGI		 PMID:9374397 PMID:9847249 GO_REF:0000107 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:12645927) MGI PMID:12645927 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10727859) Ensembl
MGI		 PMID:10727859 GO_REF:0000107 NCBI chr 4:1,517,986...1,521,403
Ensembl chr 4:1,518,180...1,519,370 		JBrowse link
G BARX1 BARX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17855428) Ensembl
MGI		 PMID:17855428 GO_REF:0000107 NCBI chr 3:43,284,609...43,288,269
Ensembl chr 3:43,284,464...43,288,281 		JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:47,687,662...47,692,761
Ensembl chr 5:47,686,404...47,692,762 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15136140) Ensembl
MGI		 PMID:15136140 GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542835)
(PMID:10772805)		 Ensembl
MGI		 PMID:10772805 PMID:15542835 GO_REF:0000107 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18974875)
(PMID:18794365)		 Ensembl
MGI		 PMID:18794365 PMID:18974875 GO_REF:0000107 NCBI chr12:14,112,943...14,254,810
Ensembl chr12:14,112,718...14,254,790 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542835) Ensembl
MGI		 PMID:15542835 GO_REF:0000107 NCBI chr 9:64,033,853...64,037,795
Ensembl chr 9:64,031,832...64,035,837 		JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr 9:53,079,543...53,178,881
Ensembl chr 9:53,079,550...53,178,881 		JBrowse link
G CDX1 caudal type homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11784046)
(PMID:11784046), (PMID:7585967)		 Ensembl
MGI		 PMID:7585967 PMID:11784046 GO_REF:0000107 NCBI chr 2:151,202,842...151,217,132
Ensembl chr 2:151,202,777...151,216,988 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19853565) Ensembl
MGI		 PMID:19853565 GO_REF:0000107 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057 		JBrowse link
G CDX4 caudal type homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19853565) Ensembl
MGI		 PMID:19853565 GO_REF:0000107 NCBI chr  X:59,089,131...59,100,958
Ensembl chr  X:59,091,946...59,100,431 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9501024) Ensembl
MGI		 PMID:9501024 GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G CFC1B cryptic, EGF-CFC family member 1B involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:11412024) GO_Central
MGI		 PMID:11412024 GO_REF:0000033 NCBI chr15:56,943,183...56,951,929 JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16399080) Ensembl
MGI		 PMID:16399080 GO_REF:0000107 NCBI chr14:50,528,950...50,558,664
Ensembl chr14:50,528,955...50,558,662 		JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15148409) Ensembl
MGI		 PMID:15148409 GO_REF:0000107 NCBI chr 6:70,184,935...70,241,560
Ensembl chr 6:70,184,936...70,241,477 		JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within ISO (PMID:17067568) MGI PMID:17067568 NCBI chr14:104,561,394...104,567,099
Ensembl chr14:104,563,195...104,567,095 		JBrowse link
G CYP26C1 cytochrome P450 family 26 subfamily C member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17067568) Ensembl
MGI		 PMID:17067568 GO_REF:0000107 NCBI chr14:104,550,901...104,558,977
Ensembl chr14:104,551,134...104,559,978 		JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12196586)
(PMID:15917450)		 Ensembl
MGI		 PMID:12196586 PMID:15917450 GO_REF:0000107 NCBI chr14:127,649,675...127,656,972
Ensembl chr14:127,650,688...127,655,706 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:10498685) MGI PMID:10498685 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G FOXH1 forkhead box H1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11358868) Ensembl
MGI		 PMID:11358868 GO_REF:0000107 NCBI chr 4:320,610...324,570
Ensembl chr 4:322,838...324,481 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:19877275) MGI PMID:19877275 NCBI chr 6:54,823,680...54,830,425
Ensembl chr 6:54,823,668...54,829,506 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10391213)
(PMID:23918385)		 Ensembl
MGI		 PMID:10391213 PMID:23918385 GO_REF:0000107 NCBI chr 5:21,191,322...21,199,024
Ensembl chr 5:21,191,251...21,201,804 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22841643) Ensembl
MGI		 PMID:22841643 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22841643)
(PMID:15315762)		 Ensembl
MGI		 PMID:15315762 PMID:22841643 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GRSF1 G-rich RNA sequence binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15857914) Ensembl
MGI		 PMID:15857914 GO_REF:0000107 NCBI chr 8:67,586,935...67,607,422
Ensembl chr 8:67,586,738...67,607,689 		JBrowse link
G HELT helt bHLH transcription factor involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:46,087,988...46,089,986
Ensembl chr15:46,087,696...46,090,084 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G HES2 hes family bHLH transcription factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:67,276,774...67,279,617
Ensembl chr 6:67,276,777...67,279,603 		JBrowse link
G HES3 hes family bHLH transcription factor 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:67,134,259...67,138,639
Ensembl chr 6:67,133,482...67,135,292 		JBrowse link
G HES4 hes family bHLH transcription factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:63,351,593...63,356,690
Ensembl chr 6:63,351,602...63,356,466 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881 		JBrowse link
G HES6 hes family bHLH transcription factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:137,785,808...137,787,689
Ensembl chr15:137,785,810...137,787,694 		JBrowse link
G HES7 hes family bHLH transcription factor 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:53,334,350...53,339,336
Ensembl chr12:53,333,907...53,337,575 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:56,859,640...56,863,807
Ensembl chr 4:56,859,663...56,863,788 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:95,442,655...95,459,597
Ensembl chr 6:95,442,661...95,459,575 		JBrowse link
G HHEX hematopoietically expressed homeobox involved_in ISO (PMID:16936074) UniProt PMID:16936074 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,219 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537918) Ensembl
MGI		 PMID:16537918 GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537918) Ensembl
MGI		 PMID:16537918 GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15872003) Ensembl
MGI		 PMID:15872003 GO_REF:0000107 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,201,631 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:15367676)		 MGI PMID:10529420 PMID:15367676 NCBI chr18:45,477,561...45,480,306
Ensembl chr18:45,477,461...45,480,152 		JBrowse link
G HOXA10 homeobox A10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr18:45,393,525...45,403,259
Ensembl chr18:45,393,885...45,403,257 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9367425) Ensembl
MGI		 PMID:9367425 GO_REF:0000107 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9441667)
(PMID:7913519)		 Ensembl
MGI
GO_Central		 PMID:7913519 PMID:9441667 GO_REF:0000033 GO_REF:0000107 NCBI chr18:45,421,542...45,467,803
Ensembl chr18:45,454,213...45,466,537 		JBrowse link
G HOXA4 homeobox A4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:7628700)
(PMID:7918106)		 GO_Central
MGI		 PMID:7628700 PMID:7918106 GO_REF:0000033 NCBI chr18:45,443,268...45,445,662 JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:7901120), (PMID:9603431)
(PMID:17417799)
(PMID:17626057)		 Ensembl
MGI
GO_Central		 PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057 GO_REF:0000033 GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885 		JBrowse link
G HOXA6 homeobox A6 acts_upstream_of_or_within ISO (PMID:17626057)
(PMID:7918106)		 MGI PMID:7918106 PMID:17626057 NCBI chr18:45,423,530...45,429,947 JBrowse link
G HOXA7 homeobox A7 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9784603) Ensembl
MGI
GO_Central		 PMID:9784603 GO_REF:0000033 GO_REF:0000107 NCBI chr18:45,417,137...45,419,113
Ensembl chr18:45,417,203...45,419,101 		JBrowse link
G HOXA9 homeobox A9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8625797)
(PMID:17626057)
(PMID:9013929)		 Ensembl
MGI
GO_Central		 PMID:8625797 PMID:9013929 PMID:17626057 GO_REF:0000033 GO_REF:0000107 NCBI chr18:45,404,594...45,411,512
Ensembl chr18:45,408,375...45,411,509 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747)
(PMID:10529420)		 Ensembl
MGI		 PMID:10529420 PMID:10885747 GO_REF:0000107 NCBI chr12:24,784,953...24,786,377
Ensembl chr12:24,784,594...24,786,576 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9012503)
(PMID:10885747)		 Ensembl
MGI		 PMID:9012503 PMID:10885747 GO_REF:0000107 NCBI chr12:24,796,786...24,800,499
Ensembl chr12:24,797,225...24,799,303 		JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10885747)
(PMID:9441667)		 Ensembl
MGI
GO_Central		 PMID:9441667 PMID:10885747 GO_REF:0000033 GO_REF:0000107 NCBI chr12:24,803,119...24,827,557
Ensembl chr12:24,804,647...24,809,937 		JBrowse link
G HOXB4 homeobox B4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G HOXB5 homeobox B5 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:7828847)
(PMID:17626057)
(PMID:10885747)		 Ensembl
MGI
GO_Central		 PMID:7828847 PMID:10885747 PMID:17626057 GO_REF:0000033 GO_REF:0000107 NCBI chr12:24,845,224...24,849,639
Ensembl chr12:24,845,225...24,847,918 		JBrowse link
G HOXB6 homeobox B6 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17626057)
(PMID:7828847)
(PMID:10885747)		 Ensembl
MGI
GO_Central		 PMID:7828847 PMID:10885747 PMID:17626057 GO_REF:0000033 GO_REF:0000107 NCBI chr12:24,849,741...24,853,494
Ensembl chr12:24,849,742...24,852,286 		JBrowse link
G HOXB7 homeobox B7 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9784603)
(PMID:10885747)		 Ensembl
MGI
GO_Central		 PMID:9784603 PMID:10885747 GO_REF:0000033 GO_REF:0000107 NCBI chr12:24,861,165...24,864,675
Ensembl chr12:24,861,174...24,864,620 		JBrowse link
G HOXB8 homeobox B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747)
(PMID:10559485), (PMID:11311170)
(PMID:14623233)
(PMID:11311170)		 Ensembl
MGI		 PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 GO_REF:0000107 NCBI chr12:24,865,985...24,879,706
Ensembl chr12:24,865,984...24,868,930 		JBrowse link
G HOXB9 homeobox B9 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 Ensembl chr12:24,875,723...24,880,333 JBrowse link
G HOXC10 homeobox C10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr 5:19,197,810...19,202,975
Ensembl chr 5:19,197,807...19,202,970 		JBrowse link
G HOXC11 homeobox C11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr 5:19,181,580...19,189,031
Ensembl chr 5:19,178,619...19,189,013 		JBrowse link
G HOXC13 homeobox C13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9420327) Ensembl
MGI		 PMID:9420327 GO_REF:0000107 NCBI chr 5:19,151,096...19,159,008
Ensembl chr 5:19,151,084...19,158,646 		JBrowse link
G HOXC4 homeobox C4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8626021)
(PMID:8660891)		 Ensembl
MGI
GO_Central		 PMID:8626021 PMID:8660891 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:19,250,411...19,268,267
Ensembl chr 5:19,265,081...19,268,257 		JBrowse link
G HOXC5 homeobox C5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI		 PMID:17626057 GO_REF:0000107 NCBI chr 5:19,245,857...19,248,183
Ensembl chr 5:19,245,851...19,248,172 		JBrowse link
G HOXC6 homeobox C6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI		 PMID:17626057 GO_REF:0000107 NCBI chr 5:19,230,227...19,243,522
Ensembl chr 5:19,229,594...19,243,652 		JBrowse link
G HOXC8 homeobox C8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311170) Ensembl
MGI		 PMID:11311170 GO_REF:0000107 NCBI chr 5:19,222,124...19,225,734
Ensembl chr 5:19,222,057...19,225,835 		JBrowse link
G HOXC9 homeobox C9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17626057)
(PMID:7547473)		 Ensembl
MGI
GO_Central		 PMID:7547473 PMID:17626057 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:19,212,490...19,215,859
Ensembl chr 5:19,212,905...19,215,984 		JBrowse link
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795)
(PMID:12869760)		 Ensembl
MGI		 PMID:10642795 PMID:12869760 GO_REF:0000107 NCBI chr15:81,911,372...81,921,164
Ensembl chr15:81,917,637...81,921,461 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:12869760) MGI PMID:12869760 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8106170) MGI
Ensembl		 PMID:8106170 GO_REF:0000107 NCBI chr15:81,893,997...81,897,965
Ensembl chr15:81,893,972...81,896,944 		JBrowse link
G HOXD3 homeobox D3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9441667)
(PMID:7910549), (PMID:7913519)
(PMID:7913519)		 Ensembl
MGI
GO_Central		 PMID:7910549 PMID:7913519 PMID:9441667 GO_REF:0000033 GO_REF:0000107 NCBI chr15:81,969,482...81,974,893
Ensembl chr15:81,958,701...81,973,673 		JBrowse link
G HOXD4 homeobox D4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 Ensembl chr15:81,952,660...81,955,172 JBrowse link
G HOXD8 homeobox D8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311170) Ensembl
MGI		 PMID:11311170 GO_REF:0000107 NCBI chr15:81,930,923...81,935,528
Ensembl chr15:81,931,010...81,935,529 		JBrowse link
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8625797)
(PMID:10642795)
(PMID:17626057)		 Ensembl
MGI
GO_Central		 PMID:8625797 PMID:10642795 PMID:17626057 GO_REF:0000033 GO_REF:0000107 NCBI chr15:81,910,415...81,926,276
Ensembl chr15:81,924,142...81,926,274 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16109169) MGI PMID:16109169 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:15930098)
(PMID:12701101)		 MGI PMID:12701101 PMID:15930098 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10220415) MGI PMID:10220415 NCBI chr 2:134,932,339...135,069,408
Ensembl chr 2:134,932,615...135,069,377 		JBrowse link
G KMT2A lysine methyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16618927)
(PMID:15741318)		 Ensembl
MGI		 PMID:15741318 PMID:16618927 GO_REF:0000107 NCBI chr 9:45,743,566...45,828,559
Ensembl chr 9:45,743,397...45,824,884 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10498685) Ensembl
MGI		 PMID:10498685 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19357712)
(PMID:18849982)		 Ensembl
MGI		 PMID:18849982 PMID:19357712 GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,351...3,203,381 		JBrowse link
G LOC102161418 interferon-induced transmembrane protein 1-like acts_upstream_of_or_within ISO (PMID:15857914) MGI PMID:15857914 NCBI chr 2:156,364...157,650 JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15142971) Ensembl
MGI		 PMID:15142971 GO_REF:0000107 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15142971)
(PMID:19795512)
(PMID:16126904)		 MGI PMID:15142971 PMID:16126904 PMID:19795512 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MLLT3 MLLT3 super elongation complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12242306) Ensembl
MGI		 PMID:12242306 GO_REF:0000107 NCBI chr 1:202,317,458...202,604,308
Ensembl chr 1:202,318,929...202,607,058 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368089) Ensembl
MGI		 PMID:16368089 GO_REF:0000107 NCBI chr15:87,175,629...87,179,953
Ensembl chr15:87,175,765...87,179,959 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163)
(PMID:15302604)
(PMID:11418863), (PMID:15004567)
(PMID:16496285)		 Ensembl
MGI		 PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 acts_upstream_of_or_within ISO (PMID:15829524) MGI PMID:15829524 NCBI chr 7:83,076,119...83,090,250
Ensembl chr 7:83,076,124...83,090,535 		JBrowse link
G OTX1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15105370) Ensembl
MGI		 PMID:15105370 GO_REF:0000107 NCBI chr 3:78,895,142...78,903,045
Ensembl chr 3:78,896,675...78,903,122 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11412024)
(PMID:12652306)
(PMID:9501024)		 MGI PMID:9501024 PMID:11412024 PMID:12652306 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,579...186,038,229 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12196586)
(PMID:15917450)		 Ensembl
MGI		 PMID:12196586 PMID:15917450 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within ISO (PMID:11566859) MGI PMID:11566859 NCBI chr 4:85,824,590...86,170,328
Ensembl chr 4:85,824,666...86,170,191 		JBrowse link
G PCGF2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15741318)
(PMID:8625838)		 Ensembl
MGI		 PMID:8625838 PMID:15741318 GO_REF:0000107 NCBI chr12:23,362,631...23,375,779
Ensembl chr12:23,362,654...23,375,775 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:228,854,587...229,308,054
Ensembl chr 1:228,854,595...229,308,906 		JBrowse link
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr 8:30,988,366...31,134,331
Ensembl chr 8:30,988,370...31,134,331 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11784046)
(PMID:11784046), (PMID:8388780)		 Ensembl
MGI		 PMID:8388780 PMID:11784046 GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G RING1 ring finger protein 1 acts_upstream_of_or_within ISO (PMID:11060235), (PMID:16624538)
(PMID:16624538)		 MGI PMID:11060235 PMID:16624538 NCBI chr 7:25,251,507...25,255,526
Ensembl chr 7:25,251,486...25,255,522 		JBrowse link
G SCMH1 Scm polycomb group protein homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215307) Ensembl
MGI		 PMID:17215307 GO_REF:0000107 NCBI chr 6:169,999,763...170,189,357
Ensembl chr 6:169,999,792...170,189,353 		JBrowse link
G SF3B1 splicing factor 3b subunit 1 acts_upstream_of_or_within ISO (PMID:15741318) MGI PMID:15741318 NCBI chr15:101,274,968...101,338,018
Ensembl chr15:101,276,851...101,299,105 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467359) Ensembl
MGI		 PMID:16467359 GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467359) Ensembl
MGI		 PMID:16467359 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118883) Ensembl
MGI		 PMID:11118883 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11418863), (PMID:9529255)
(PMID:12842913)		 Ensembl
MGI		 PMID:9529255 PMID:11418863 PMID:12842913 GO_REF:0000107 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15215210) Ensembl
MGI		 PMID:15215210 GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22987639) Ensembl
MGI		 PMID:22987639 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15084464)
(PMID:16399080)		 MGI PMID:15084464 PMID:16399080 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171) Ensembl
MGI		 PMID:15384171 GO_REF:0000107 NCBI chr 1:2,717,165...2,725,561
Ensembl chr 1:2,717,165...2,725,601 		JBrowse link
G TCF15 transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8955271) Ensembl
MGI		 PMID:8955271 GO_REF:0000107 NCBI chr17:34,626,682...34,632,881
Ensembl chr17:34,626,670...34,633,263 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16845371) Ensembl
MGI		 PMID:16845371 GO_REF:0000107 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G TSHZ1 teashirt zinc finger homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17586487) Ensembl
MGI		 PMID:17586487 GO_REF:0000107 NCBI chr 1:148,905,179...148,984,984
Ensembl chr 1:148,906,075...148,984,832 		JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19334287) Ensembl
MGI		 PMID:19334287 GO_REF:0000107 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18849982) MGI PMID:18849982 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635 		JBrowse link
G WIF1 WNT inhibitory factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:29,450,442...29,543,913
Ensembl chr 5:29,450,442...29,543,913 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,627,291...17,681,197
Ensembl chr12:17,628,726...17,681,026 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15148409) Ensembl
MGI		 PMID:15148409 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15073149), (PMID:19795512) Ensembl
MGI		 PMID:15073149 PMID:19795512 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16624538) Ensembl
MGI		 PMID:16624538 GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10835630) Ensembl
MGI		 PMID:10835630 GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16496285) Ensembl
MGI		 PMID:16496285 GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MED12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20630950) Ensembl
MGI		 PMID:20630950 GO_REF:0000107 NCBI chr  X:57,150,884...57,174,367
Ensembl chr  X:57,150,919...57,175,333 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11029008) Ensembl
MGI		 PMID:11029008 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:12645927) MGI PMID:12645927 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17531978) Ensembl
MGI		 PMID:17531978 GO_REF:0000107 NCBI chr 1:82,427,956...82,432,844
Ensembl chr 1:82,428,047...82,432,638 		JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11948913) Ensembl
MGI		 PMID:11948913 GO_REF:0000107 NCBI chr15:120,901,471...120,917,359
Ensembl chr15:120,901,376...120,917,486 		JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7903221) Ensembl
MGI		 PMID:7903221 GO_REF:0000107 NCBI chr14:66,280,665...66,291,308
Ensembl chr14:66,284,581...66,291,299 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9367425) Ensembl
MGI		 PMID:9367425 GO_REF:0000107 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7925021) Ensembl
MGI		 PMID:7925021 GO_REF:0000107 NCBI chr17:43,408,390...43,411,782
Ensembl chr17:43,404,925...43,411,739 		JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZIC2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chr11:68,840,802...68,845,441
Ensembl chr11:68,840,631...68,845,378 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRG1 adhesion G protein-coupled receptor G1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24531968) Ensembl
MGI		 PMID:24531968 GO_REF:0000107 NCBI chr 6:19,523,618...19,570,891
Ensembl chr 6:19,527,648...19,570,893 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:23431145) MGI PMID:23431145 NCBI chr 4:69,801,619...69,803,375
Ensembl chr 4:69,802,200...69,803,309 		JBrowse link
G DMRTA2 DMRT like family A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22923088)
(PMID:23056351)		 Ensembl
MGI		 PMID:22923088 PMID:23056351 GO_REF:0000107 NCBI chr 6:161,616,646...161,622,591
Ensembl chr 6:161,616,646...161,621,904 		JBrowse link
G EMX1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15147765) Ensembl
MGI		 PMID:15147765 GO_REF:0000107 NCBI chr 3:69,842,061...69,863,940
Ensembl chr 3:69,839,890...69,859,731 		JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12764040)
(PMID:15147765)		 Ensembl
MGI		 PMID:12764040 PMID:15147765 GO_REF:0000107 NCBI chr14:127,649,675...127,656,972
Ensembl chr14:127,650,688...127,655,706 		JBrowse link
G EOMES eomesodermin acts_upstream_of_or_within
involved_in		 ISO (PMID:23431145)
(PMID:30186101)		 MGI PMID:23431145 PMID:30186101 NCBI chr13:14,209,590...14,216,184
Ensembl chr13:14,209,736...14,215,797 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 acts_upstream_of_or_within ISO (PMID:17828260) MGI PMID:17828260 NCBI chr 2:100,447,661...100,457,510
Ensembl chr 2:100,447,705...100,457,506 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12764040)
(PMID:23431145)		 Ensembl
MGI		 PMID:12764040 PMID:23431145 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24586484) Ensembl
MGI		 PMID:24586484 GO_REF:0000107 NCBI chr13:123,760,008...123,780,919
Ensembl chr13:123,754,864...123,780,920 		JBrowse link
compartment pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12001066) Ensembl
MGI		 PMID:12001066 GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G DLL3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12001066) Ensembl
MGI		 PMID:12001066 GO_REF:0000107 NCBI chr 6:48,135,738...48,155,373
Ensembl chr 6:48,147,635...48,155,292 		JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12001066) Ensembl
MGI		 PMID:12001066 GO_REF:0000107 NCBI chr 3:1,721,044...1,819,426
Ensembl chr 3:1,810,892...1,820,048 		JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12001066) Ensembl
MGI		 PMID:12001066 GO_REF:0000107
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31887266) Ensembl
MGI		 PMID:31887266 GO_REF:0000107 NCBI chr12:53,394,500...53,397,064
Ensembl chr12:53,393,332...53,397,064 		JBrowse link
determination of bilateral symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15731404) Ensembl
MGI		 PMID:15731404 GO_REF:0000107 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chr12:18,469,705...18,474,316 JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:18043505) MGI PMID:18043505 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G GREM2 gremlin 2, DAN family BMP antagonist involved_in ISO (PMID:23063586) UniProt PMID:23063586 NCBI chr10:11,884,198...11,904,249
Ensembl chr10:11,885,280...11,885,780 		JBrowse link
G NBL1 NBL1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:78,046,084...78,071,609
Ensembl chr 6:78,059,392...78,071,604 		JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15750185) Ensembl
MGI		 PMID:15750185 GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in ISO (PMID:15466485) BHF-UCL PMID:15466485 NCBI chr 2:66,068,722...66,073,537 JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11076684) Ensembl
MGI		 PMID:11076684 GO_REF:0000107 NCBI chr16:68,679,977...68,683,346
Ensembl chr16:68,677,963...68,683,342 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9576835) Ensembl
MGI		 PMID:9576835 GO_REF:0000107 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,459,971...16,462,207 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within		 ISO (PMID:23063620)
(PMID:18043505)		 UniProt
MGI		 PMID:18043505 PMID:23063620 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:70,088,119...70,097,027
Ensembl chr 2:70,087,887...70,096,924 		JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10349618) Ensembl
MGI		 PMID:10349618 GO_REF:0000107 NCBI chr 1:2,717,165...2,725,561
Ensembl chr 1:2,717,165...2,725,601 		JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in ISO (PMID:15466485) BHF-UCL PMID:15466485 NCBI chr 2:66,068,722...66,073,537 JBrowse link
G NODAL nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAH11 dynein axonemal heavy chain 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18414654) Ensembl
MGI		 PMID:18414654 GO_REF:0000107 NCBI chr 9:90,420,044...90,768,327
Ensembl chr 9:90,423,092...90,768,353 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531373) Ensembl
MGI		 PMID:15531373 GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ACVR1C activin A receptor type 1C NOT|acts_upstream_of_or_within ISO (PMID:15485907) MGI PMID:15485907 NCBI chr15:64,452,632...64,529,329
Ensembl chr15:64,455,989...64,529,107 		JBrowse link
G ACVR2A activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16991118) Ensembl
MGI		 PMID:16991118 GO_REF:0000107 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16991118)
(PMID:9242489)		 Ensembl
MGI		 PMID:9242489 PMID:16991118 GO_REF:0000107 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ALG5 ALG5 dolichyl-phosphate beta-glucosyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr11:12,777,549...12,815,969
Ensembl chr11:12,777,552...12,816,008 		JBrowse link
G ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 1:240,522,835...240,584,354
Ensembl chr 1:240,522,837...240,584,496 		JBrowse link
G AP1B1 adaptor related protein complex 1 subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr14:46,469,462...46,520,175
Ensembl chr14:46,469,430...46,520,153 		JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr13:165,829,772...165,910,959
Ensembl chr13:165,828,059...165,910,961 		JBrowse link
G BICC1 BicC family RNA binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr14:61,793,362...62,128,424
Ensembl chr14:61,793,332...62,127,094 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO (PMID:25807483)
(PMID:24947469)		 MGI PMID:24947469 PMID:25807483 NCBI chr 8:10,779,206...10,898,189
Ensembl chr 8:10,779,334...10,898,196 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483)
(PMID:28289722)		 Ensembl
MGI		 PMID:25807483 PMID:28289722 GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:28182636) MGI PMID:28182636 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr 5:94,384,397...94,474,337
Ensembl chr 5:94,384,415...94,474,335 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,848,184...99,900,001
Ensembl chr 1:99,850,562...99,900,136 		JBrowse link
G CFC1B cryptic, EGF-CFC family member 1B involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:10521397)
(PMID:25807483)		 GO_Central
MGI		 PMID:10521397 PMID:25807483 GO_REF:0000033 NCBI chr15:56,943,183...56,951,929 JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24091014) Ensembl
MGI		 PMID:24091014 GO_REF:0000107 NCBI chr 7:35,127,245...35,285,933
Ensembl chr 7:35,159,574...35,285,929 		JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (PMID:15466485) MGI PMID:15466485 NCBI chr 2:66,068,722...66,073,537 JBrowse link
G DAW1 dynein assembly factor with WD repeats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483)
(PMID:28289722)		 Ensembl
MGI		 PMID:25807483 PMID:28289722 GO_REF:0000107 NCBI chr15:129,220,060...129,271,449
Ensembl chr15:129,220,190...129,271,241 		JBrowse link
G DISP1 dispatched RND transporter family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804)
(PMID:12421714)		 Ensembl
MGI		 PMID:12421714 PMID:15755804 GO_REF:0000107 NCBI chr10:11,526,353...11,709,888
Ensembl chr10:11,526,619...11,709,888 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12730124) Ensembl
MGI		 PMID:12730124 GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25807483) Ensembl
MGI
GO_Central		 PMID:25807483 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:116,331,217...116,431,673
Ensembl chr 1:116,332,630...116,430,984 		JBrowse link
G DNAH11 dynein axonemal heavy chain 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483)
(PMID:9353118)
(PMID:10556073)
(PMID:27340223)
(PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950)		 Ensembl
MGI
SYSCILIA_CCNET		 PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 More... GO_REF:0000107 MGI:48750 NCBI chr 9:90,420,044...90,768,327
Ensembl chr 9:90,423,092...90,768,353 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28289722)
(PMID:25807483)
(PMID:11912187)
(PMID:11788826), (PMID:17515466), (PMID:22499950)		 Ensembl
MGI
SYSCILIA_CCNET		 PMID:11788826 PMID:11912187 PMID:17515466 PMID:22499950 PMID:25807483 More... GO_REF:0000107 NCBI chr16:3,114,267...3,366,189
Ensembl chr16:3,114,273...3,430,341 		JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483)
(PMID:11231901), (PMID:17515466), (PMID:22499950)		 Ensembl
MGI
SYSCILIA_CCNET		 PMID:11231901 PMID:17515466 PMID:22499950 PMID:25807483 GO_REF:0000107 NCBI chr10:32,275,173...32,355,444
Ensembl chr10:32,275,175...32,355,399 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18950741) Ensembl
SYSCILIA_CCNET		 PMID:18950741 GO_REF:0000107 NCBI chr12:6,808,966...6,832,767
Ensembl chr12:6,809,335...6,832,766 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21746835) Ensembl
MGI		 PMID:21746835 GO_REF:0000107 NCBI chr14:112,617,338...112,637,397
Ensembl chr14:112,617,398...112,637,913 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 3:112,581,765...112,621,664
Ensembl chr 3:112,581,779...112,621,623 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804), (PMID:16061793)
(PMID:16229832), (PMID:25807483)		 Ensembl
MGI		 PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 GO_REF:0000107 NCBI chr 9:33,720,920...34,039,954
Ensembl chr 9:33,720,877...34,040,188 		JBrowse link
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15371312) Ensembl
MGI		 PMID:15371312 GO_REF:0000107 NCBI chr 3:96,656,099...96,703,282
Ensembl chr 3:96,654,415...96,703,237 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15329346) Ensembl
MGI		 PMID:15329346 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10411502) Ensembl
MGI		 PMID:10411502 GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11493558) Ensembl
MGI		 PMID:11493558 GO_REF:0000107 NCBI chr 6:2,579,348...2,598,122
Ensembl chr 6:2,592,993...2,597,659 		JBrowse link
G FOXH1 forkhead box H1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12642485) Ensembl
MGI		 PMID:12642485 GO_REF:0000107 NCBI chr 4:320,610...324,570
Ensembl chr 4:322,838...324,481 		JBrowse link
G FOXJ1 forkhead box J1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,374...5,312,106 		JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (PMID:27472056) MGI PMID:27472056 NCBI chr 6:86,817...105,987
Ensembl chr 6:64,714...105,993 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 3:40,309,298...40,372,139
Ensembl chr 3:40,309,635...40,372,135 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr17:46,209,956...46,246,696
Ensembl chr17:46,210,150...46,246,674 		JBrowse link
G IFT74 intraflagellar transport 74 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 1:196,084,498...196,173,880
Ensembl chr 1:196,086,072...196,173,880 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:10804177)		 MGI PMID:10804177 PMID:15755804 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10220415)
(PMID:15755804)		 MGI PMID:10220415 PMID:15755804 NCBI chr 2:134,932,339...135,069,408
Ensembl chr 2:134,932,615...135,069,377 		JBrowse link
G LOC100524517 left-right determination factor 2 involved_in ISO (PMID:9708732) BHF-UCL PMID:9708732 NCBI chr10:13,815,157...13,819,249 JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19776033)
(PMID:21045211)		 Ensembl
MGI		 PMID:19776033 PMID:21045211 GO_REF:0000107 NCBI chr12:34,499,139...34,512,191
Ensembl chr12:34,499,142...34,512,187 		JBrowse link
G NEK8 NIMA related kinase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr12:44,963,095...44,975,092
Ensembl chr12:44,965,116...44,975,083 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15329346) Ensembl
MGI		 PMID:15329346 GO_REF:0000107 NCBI chr 8:9,179,061...9,183,340
Ensembl chr 8:9,179,232...9,182,892 		JBrowse link
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21746835) MGI
Ensembl		 PMID:21746835 GO_REF:0000107 NCBI chr 4:81,639,907...81,912,276
Ensembl chr 4:81,639,909...81,911,743 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16496285)
(PMID:11311163)
(PMID:15466485)
(PMID:28182636)
(PMID:12642485), (PMID:12654299)
(PMID:12231623)		 Ensembl
MGI		 PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 More... GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7789282)
(PMID:12730124)		 Ensembl
MGI		 PMID:7789282 PMID:12730124 GO_REF:0000107
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12730124) Ensembl
MGI		 PMID:12730124 GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
G ODAD2 outer dynein arm docking complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23849778)
(PMID:25807483)		 Ensembl
MGI
SYSCILIA_CCNET		 PMID:23849778 PMID:25807483 GO_REF:0000107 NCBI chr10:39,276,423...39,463,096
Ensembl chr10:39,274,932...39,462,846 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25192045) Ensembl
SYSCILIA_CCNET		 PMID:25192045 GO_REF:0000107 NCBI chr 2:70,088,119...70,097,027
Ensembl chr 2:70,087,887...70,096,924 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 1:228,854,587...229,308,054
Ensembl chr 1:228,854,595...229,308,906 		JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10809672) Ensembl
MGI		 PMID:10809672 GO_REF:0000107 NCBI chr 1:145,508,658...145,697,017
Ensembl chr 1:145,508,534...145,695,666 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:27305836)
(PMID:34715025)		 MGI
UniProt		 PMID:27305836 PMID:34715025
G PIERCE2 piercer of microtubule wall 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:116,435,725...116,448,887
Ensembl chr 1:116,435,820...116,448,972 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:12397115)
(PMID:9708732)
(PMID:10498698)
(PMID:11493526), (PMID:24091014)
(PMID:10572050)
(PMID:10499586)		 MGI
BHF-UCL		 PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 More... NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12062060) Ensembl
MGI		 PMID:12062060 GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932 		JBrowse link
G PSKH1 protein serine kinase H1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 6:28,508,785...28,544,063
Ensembl chr 6:28,508,823...28,544,062 		JBrowse link
G RFX3 regulatory factor X3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15121860) Ensembl
MGI		 PMID:15121860 GO_REF:0000107 NCBI chr 1:218,340,427...218,647,389
Ensembl chr 1:218,360,718...218,640,923 		JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17531978) Ensembl
MGI		 PMID:17531978 GO_REF:0000107 NCBI chr 1:82,427,956...82,432,844
Ensembl chr 1:82,428,047...82,432,638 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904) Ensembl
MGI		 PMID:17553904 GO_REF:0000107 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190 		JBrowse link
G RTTN rotatin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11900971) Ensembl
MGI		 PMID:11900971 GO_REF:0000107 NCBI chr 1:152,688,305...152,833,969
Ensembl chr 1:152,689,504...152,833,946 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10385121), (PMID:10411502), (PMID:10500184) Ensembl
MGI		 PMID:10385121 PMID:10411502 PMID:10500184 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12421714)
(PMID:15755804)		 Ensembl
MGI		 PMID:12421714 PMID:15755804 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G SMYD5 SMYD family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20350929)
(PMID:17884984), (PMID:22357932)		 Ensembl
MGI		 PMID:17884984 PMID:20350929 PMID:22357932 GO_REF:0000107 NCBI chr 3:69,566,112...69,571,165
Ensembl chr 3:69,567,449...69,571,100 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr 6:164,197,511...164,266,615
Ensembl chr 6:164,197,600...164,265,818 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16155214) Ensembl
MGI		 PMID:16155214 GO_REF:0000107 NCBI chr14:113,500,001...113,628,064
Ensembl chr14:113,500,842...113,626,003 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25807483) Ensembl
MGI		 PMID:25807483 GO_REF:0000107 NCBI chr 1:41,057,782...41,265,416
Ensembl chr 1:41,057,838...41,265,375 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16556915) MGI PMID:16556915 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:16705179) MGI PMID:16705179 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,402...103,234,610 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31887266) Ensembl
MGI		 PMID:31887266 GO_REF:0000107 NCBI chr12:53,394,500...53,397,064
Ensembl chr12:53,393,332...53,397,064 		JBrowse link
G TMEM67 transmembrane protein 67 acts_upstream_of_or_within ISO (PMID:25807483) MGI PMID:25807483 NCBI chr 4:42,878,249...42,931,106
Ensembl chr 4:42,879,140...42,931,121 		JBrowse link
G TNNI3 troponin I3, cardiac type involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:59,366,828...59,377,490
Ensembl chr 6:59,371,080...59,377,734
Ensembl chr 6:59,371,080...59,377,734 		JBrowse link
G WIF1 WNT inhibitory factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:29,450,442...29,543,913
Ensembl chr 5:29,450,442...29,543,913 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16291790) Ensembl
MGI		 PMID:16291790 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24091014) Ensembl
MGI		 PMID:24091014 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16496285)
(PMID:15384171)		 Ensembl
MGI		 PMID:15384171 PMID:16496285 GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
determination of ventral identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIDA axin interactor, dorsalization associated involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:11,430,758...11,466,849
Ensembl chr10:11,428,399...11,466,643 		JBrowse link
dorsal/ventral axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10330403) Ensembl
MGI		 PMID:10330403 GO_REF:0000107 NCBI chr 3:41,344,908...41,393,999
Ensembl chr 3:41,337,071...41,393,997 		JBrowse link
G AXIN2 axin 2 ISO RGD PMID:9566905 RGD:68736 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12923052) Ensembl
MGI		 PMID:12923052 GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12923052) Ensembl
MGI		 PMID:12923052 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738) MGI PMID:18985738 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MDFI MyoD family inhibitor involved_in ISO (PMID:11238923) UniProt PMID:11238923 NCBI chr 7:36,829,060...36,846,995
Ensembl chr 7:36,830,394...36,846,993 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10588713) Ensembl
MGI		 PMID:10588713 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G SENP2 SUMO specific peptidase 2 ISO RGD PMID:10944533 RGD:1299408 NCBI chr13:123,429,915...123,469,913
Ensembl chr13:123,429,995...123,471,926 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11830578)
(PMID:11830579)		 Ensembl
MGI		 PMID:11830578 PMID:11830579 GO_REF:0000107 NCBI chr 3:71,593,807...71,622,487
Ensembl chr 3:71,593,812...71,622,444 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,627,291...17,681,197
Ensembl chr12:17,628,726...17,681,026 		JBrowse link
dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15218525) Ensembl
MGI		 PMID:15218525 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716)
(PMID:18003640)		 Ensembl
MGI		 PMID:18003640 PMID:18590716 GO_REF:0000107 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,253,342...59,267,165 		JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23383217) Ensembl
MGI		 PMID:23383217 GO_REF:0000107 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,249...62,479,220 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:23383217)
(PMID:18590716)
(PMID:9226455)		 MGI PMID:9226455 PMID:18590716 PMID:23383217 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504941)
(PMID:17504940), (PMID:17504941)		 MGI PMID:17504940 PMID:17504941 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9247260)
(PMID:18590716), (PMID:19286674)		 Ensembl
MGI		 PMID:9247260 PMID:18590716 PMID:19286674 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GSC goosecoid homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9226455) Ensembl
MGI		 PMID:9226455 GO_REF:0000107 NCBI chr 7:116,099,053...116,101,153
Ensembl chr 7:116,098,327...116,101,338 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within
involved_in		 ISO (PMID:18590716), (PMID:19286674)
(PMID:21209331)		 MGI
BHF-UCL		 PMID:18590716 PMID:19286674 PMID:21209331 NCBI chr 2:134,932,339...135,069,408
Ensembl chr 2:134,932,615...135,069,377 		JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:18590716) MGI PMID:18590716 NCBI chr18:1,724,930...1,730,724
Ensembl chr18:1,725,244...1,730,878 		JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (PMID:18590716) MGI PMID:18590716 NCBI chr 6:77,160,827...77,268,626
Ensembl chr 6:77,161,097...77,267,415 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557208) Ensembl
MGI		 PMID:10557208 GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:10557208) MGI PMID:10557208 NCBI chr10:14,532,556...14,561,862
Ensembl chr10:14,532,767...14,577,251 		JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9262482) Ensembl
MGI		 PMID:9262482 GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G RAB23 RAB23, member RAS oncogene family involved_in ISO (PMID:7720556) UniProt PMID:7720556 NCBI chr 7:28,632,065...28,658,958
Ensembl chr 7:28,632,082...28,658,952 		JBrowse link
G RNF220 ring finger protein 220 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30177510) Ensembl
MGI		 PMID:30177510 GO_REF:0000107 NCBI chr 6:166,666,140...166,910,728
Ensembl chr 6:166,666,138...166,910,646 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17442700), (PMID:18590716)
(PMID:17504941)		 Ensembl
MGI		 PMID:17442700 PMID:17504941 PMID:18590716 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716) Ensembl
MGI		 PMID:18590716 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G TCTN1 tectonic family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16357211) Ensembl
MGI		 PMID:16357211 GO_REF:0000107 NCBI chr14:31,953,996...32,010,202
Ensembl chr14:31,954,000...32,010,185 		JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8299937) Ensembl
MGI		 PMID:8299937 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:12645927) MGI PMID:12645927 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr13:165,829,772...165,910,959
Ensembl chr13:165,828,059...165,910,961 		JBrowse link
G AXIN1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18316368) Ensembl
MGI		 PMID:18316368 GO_REF:0000107 NCBI chr 3:41,344,908...41,393,999
Ensembl chr 3:41,337,071...41,393,997 		JBrowse link
G BMP1 bone morphogenetic protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:6,443,773...6,489,066
Ensembl chr14:6,443,912...6,489,063 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15673568) Ensembl
MGI
GO_Central		 PMID:15673568 GO_REF:0000033 GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15673568) Ensembl
MGI
GO_Central		 PMID:15673568 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G CHRD chordin involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:12810603) GO_Central
MGI		 PMID:12810603 GO_REF:0000033 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15708565) Ensembl
MGI		 PMID:15708565 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DISP1 dispatched RND transporter family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr10:11,526,353...11,709,888
Ensembl chr10:11,526,619...11,709,888 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21552265)
(PMID:16229832)
(PMID:15755804), (PMID:16061793)		 Ensembl
MGI		 PMID:15755804 PMID:16061793 PMID:16229832 PMID:21552265 GO_REF:0000107 NCBI chr 9:33,720,920...34,039,954
Ensembl chr 9:33,720,877...34,040,188 		JBrowse link
G EDN1 endothelin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15110048) Ensembl
MGI		 PMID:15110048 GO_REF:0000107 NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348 		JBrowse link
G EN1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8684466), (PMID:9362463) Ensembl
MGI		 PMID:8684466 PMID:9362463 GO_REF:0000107 NCBI chr15:24,402,605...24,408,377
Ensembl chr15:24,402,370...24,407,692 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15105374) Ensembl
MGI		 PMID:15105374 GO_REF:0000107 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,253,342...59,267,165 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:10498685) MGI PMID:10498685 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G FOXG1 forkhead box G1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15893304)
(PMID:14566948)		 Ensembl
MGI		 PMID:14566948 PMID:15893304 GO_REF:0000107 NCBI chr 7:70,656,603...70,660,236
Ensembl chr 7:70,658,685...70,660,145 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504940) MGI PMID:17504940 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16342201) Ensembl
MGI		 PMID:16342201 GO_REF:0000107 NCBI chr 5:22,736,325...22,747,421
Ensembl chr 5:22,739,900...22,747,421 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16342201) Ensembl
MGI		 PMID:16342201 GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12435629), (PMID:16571630)
(PMID:14723851)		 Ensembl
MGI		 PMID:12435629 PMID:14723851 PMID:16571630 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G HHIP hedgehog interacting protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576403) Ensembl
MGI		 PMID:15576403 GO_REF:0000107 NCBI chr 8:83,583,735...83,678,368
Ensembl chr 8:83,583,739...83,679,136 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11493536) Ensembl
MGI		 PMID:11493536 GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr18:45,470,079...45,473,345
Ensembl chr18:45,470,862...45,473,876 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr12:24,796,786...24,800,499
Ensembl chr12:24,797,225...24,799,303 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:11493536) MGI PMID:11493536 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:15755804)
(PMID:21552265)		 MGI PMID:15755804 PMID:21552265 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061793)
(PMID:14603322), (PMID:15755804), (PMID:21552265)		 Ensembl
MGI		 PMID:14603322 PMID:15755804 PMID:16061793 PMID:21552265 GO_REF:0000107 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr17:46,209,956...46,246,696
Ensembl chr17:46,210,150...46,246,674 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:15755804), (PMID:15930098) MGI PMID:15755804 PMID:15930098 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chr 2:134,932,339...135,069,408
Ensembl chr 2:134,932,615...135,069,377 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10498685) Ensembl
MGI		 PMID:10498685 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11165475), (PMID:14566948) Ensembl
MGI		 PMID:11165475 PMID:14566948 GO_REF:0000107 NCBI chr 1:264,900,931...264,920,888
Ensembl chr 1:264,900,591...264,920,890 		JBrowse link
G LHX3 LIM homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18037398) Ensembl
MGI		 PMID:18037398 GO_REF:0000107
G LMX1B LIM homeobox transcription factor 1 beta involved_in ISO (PMID:10767331) UniProt PMID:10767331 NCBI chr 1:267,207,273...267,290,862
Ensembl chr 1:267,207,419...267,287,729 		JBrowse link
G LRP4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17119023)
(PMID:16207730)		 Ensembl
MGI		 PMID:16207730 PMID:17119023 GO_REF:0000107 NCBI chr 2:15,616,137...15,672,876
Ensembl chr 2:15,616,131...15,672,874 		JBrowse link
G NOG noggin involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:12652306) MGI PMID:12652306 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,579...186,038,229 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16423343) Ensembl
MGI		 PMID:16423343 GO_REF:0000107 NCBI chr17:26,417,793...26,451,707
Ensembl chr17:26,417,795...26,451,928 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15548580)
(PMID:15878992)		 Ensembl
MGI		 PMID:15548580 PMID:15878992 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PROP1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:12183375)
(PMID:15459176)		 MGI PMID:12183375 PMID:15459176 NCBI chr 2:79,627,466...79,631,270
Ensembl chr 2:79,627,603...79,631,270 		JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576403) Ensembl
MGI		 PMID:15576403 GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21552265) Ensembl
MGI		 PMID:21552265 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804)
(PMID:16571630)		 Ensembl
MGI		 PMID:15755804 PMID:16571630 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G SMYD5 SMYD family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8155581) Ensembl
MGI		 PMID:8155581 GO_REF:0000107 NCBI chr 3:69,566,112...69,571,165
Ensembl chr 3:69,567,449...69,571,100 		JBrowse link
G SP8 Sp8 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14597661) Ensembl
MGI		 PMID:14597661 GO_REF:0000107 NCBI chr 9:89,764,671...89,767,428
Ensembl chr 9:89,762,727...89,767,341 		JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15901664) Ensembl
MGI		 PMID:15901664 GO_REF:0000107 NCBI chr18:38,635,603...38,681,690
Ensembl chr18:38,635,617...38,678,133 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:17082251) MGI PMID:17082251 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,402...103,234,610 		JBrowse link
G TLL1 tolloid like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:42,855,883...43,094,215
Ensembl chr 8:42,856,469...43,092,692 		JBrowse link
G TLL2 tolloid like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:107,812,938...107,961,192
Ensembl chr14:107,812,945...107,961,155 		JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7885472), (PMID:9362463) Ensembl
MGI		 PMID:7885472 PMID:9362463 GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
embryonic axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRD chordin involved_in ISO (PMID:11118896) MGI PMID:11118896 NCBI chr13:122,266,632...122,277,513
Ensembl chr13:122,266,626...122,277,645 		JBrowse link
G CHRDL1 chordin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:90,703,422...90,827,216
Ensembl chr  X:90,703,428...90,827,210 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:58,179,084...58,184,778
Ensembl chr  X:58,179,087...58,184,499 		JBrowse link
G COBL cordon-bleu WH2 repeat protein involved_in ISO (PMID:7586755) BHF-UCL PMID:7586755 NCBI chr 9:136,850,521...137,055,249 JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9230313) Ensembl
MGI		 PMID:9230313 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G FRAT1 FRAT regulator of WNT signaling pathway 1 acts_upstream_of_or_within ISO (PMID:10534617) MGI PMID:10534617 NCBI chr14:108,739,239...108,741,953
Ensembl chr14:108,739,541...108,740,380 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,913,990...110,921,388
Ensembl chr15:110,914,009...110,921,353 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr 6:164,197,511...164,266,615
Ensembl chr 6:164,197,600...164,265,818 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,786...15,014,998 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314491) Ensembl
MGI		 PMID:16314491 GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G FOXH1 forkhead box H1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15363409) Ensembl
MGI		 PMID:15363409 GO_REF:0000107 NCBI chr 4:320,610...324,570
Ensembl chr 4:322,838...324,481 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9136932) MGI PMID:9136932 NCBI chr14:14,858,470...14,938,156
Ensembl chr14:14,884,662...14,939,941 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIMAP3 ciliary microtubule associated protein 3 acts_upstream_of_or_within ISO (PMID:20643351) MGI PMID:20643351 NCBI chr 4:109,021,109...109,033,715 JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (PMID:21209331) CACAO PMID:21209331 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G INVS inversin acts_upstream_of_or_within ISO (PMID:9192865) MGI PMID:9192865 NCBI chr 1:241,897,685...242,058,293
Ensembl chr 1:241,897,764...242,059,050 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (PMID:24052814) UniProt PMID:24052814 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (PMID:9192865) MGI PMID:9192865 NCBI chr16:51,086,014...51,089,165
Ensembl chr16:51,086,011...51,089,162 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISO (PMID:17234970) BHF-UCL PMID:17234970 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
embryonic pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049573) Ensembl
MGI		 PMID:10049573 GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057 		JBrowse link
G CDX4 caudal type homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:59,089,131...59,100,958
Ensembl chr  X:59,091,946...59,100,431 		JBrowse link
G DISP1 dispatched RND transporter family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12372301) Ensembl
MGI		 PMID:12372301 GO_REF:0000107 NCBI chr10:11,526,353...11,709,888
Ensembl chr10:11,526,619...11,709,888 		JBrowse link
G DOP1B DOP1 leucine zipper like protein B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:199,848,022...199,982,484
Ensembl chr13:199,848,044...199,982,512 		JBrowse link
G EFNB1 ephrin B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037550) Ensembl
MGI		 PMID:15037550 GO_REF:0000107 NCBI chr  X:54,947,339...54,961,403
Ensembl chr  X:54,948,342...54,973,629 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16618415)
(PMID:17522155)		 Ensembl
MGI		 PMID:16618415 PMID:17522155 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:16618415) UniProt
MGI		 PMID:16618415 GO_REF:0000024 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321) MGI PMID:19653321 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MEIS1 Meis homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:75,485,024...75,625,855
Ensembl chr 3:75,485,022...75,625,040 		JBrowse link
G MEIS3 Meis homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:53,175,920...53,188,455
Ensembl chr 6:53,175,928...53,188,406 		JBrowse link
G NANOG Nanog homeobox involved_in ISS HGNC GO_REF:0000024 NCBI chr 1:169,064,134...169,065,292 JBrowse link
G NANOG Nanog homeobox involved_in IEA
ISS		 Ensembl
HGNC		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G OOEP oocyte expressed protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:18191828) GO_Central
MGI		 PMID:18191828 GO_REF:0000033 NCBI chr 1:53,006,898...53,007,877
Ensembl chr 1:53,006,761...53,007,877 		JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr15:100,733,552...100,820,603
Ensembl chr15:100,733,560...100,820,585 		JBrowse link
G RIPPLY1 ripply transcriptional repressor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:87,315,355...87,319,580
Ensembl chr  X:87,315,358...87,319,113 		JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:82,427,956...82,432,844
Ensembl chr 1:82,428,047...82,432,638 		JBrowse link
G SATB2 SATB homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16751105) Ensembl
MGI		 PMID:16751105 GO_REF:0000107 NCBI chr15:102,962,635...103,172,224
Ensembl chr15:102,964,417...103,158,232 		JBrowse link
G SIM2 SIM bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12024028) Ensembl
MGI		 PMID:12024028 GO_REF:0000107 NCBI chr13:200,354,963...200,408,890
Ensembl chr13:200,355,407...200,403,247 		JBrowse link
G SMAD1 SMAD family member 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:82,907,557...82,987,909
Ensembl chr 8:82,908,527...82,968,994 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,357 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SMYD5 SMYD family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15550757) Ensembl
MGI		 PMID:15550757 GO_REF:0000107 NCBI chr 3:69,566,112...69,571,165
Ensembl chr 3:69,567,449...69,571,100 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:17984226) MGI PMID:17984226 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10835630) Ensembl
MGI		 PMID:10835630 GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G CFAP45 cilia and flagella associated protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33139725) Ensembl
MGI		 PMID:33139725 GO_REF:0000107 NCBI chr 4:90,593,864...90,626,660
Ensembl chr 4:90,593,858...90,627,800 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 acts_upstream_of_or_within ISO (PMID:33347437) MGI PMID:33347437 NCBI chr 1:99,848,184...99,900,001
Ensembl chr 1:99,850,562...99,900,136 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27353389) Ensembl
MGI		 PMID:27353389 GO_REF:0000107 NCBI chr 4:8,531,612...8,605,904
Ensembl chr 4:8,532,739...8,608,582 		JBrowse link
G DNAH11 dynein axonemal heavy chain 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549278), (PMID:22102620) Ensembl
MGI		 PMID:10549278 PMID:22102620 GO_REF:0000107 NCBI chr 9:90,420,044...90,768,327
Ensembl chr 9:90,423,092...90,768,353 		JBrowse link
G INVS inversin acts_upstream_of_or_within ISO (PMID:10549278) MGI PMID:10549278 NCBI chr 1:241,897,685...242,058,293
Ensembl chr 1:241,897,764...242,059,050 		JBrowse link
G MEGF8 multiple EGF like domains 8 NOT|acts_upstream_of_or_within ISO (PMID:18043505) MGI PMID:18043505 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:70,088,119...70,097,027
Ensembl chr 2:70,087,887...70,096,924 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27486780) Ensembl
MGI		 PMID:27486780 GO_REF:0000107 NCBI chr12:20,766,088...20,791,527
Ensembl chr12:20,766,884...20,791,476 		JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in ISO (PMID:16311594) UniProt PMID:16311594 NCBI chr  X:10,361,403...10,415,502 JBrowse link
G RFX3 regulatory factor X3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:218,340,427...218,647,389
Ensembl chr 1:218,360,718...218,640,923 		JBrowse link
establishment of anatomical structure orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TTC8 tetratricopeptide repeat domain 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:110,731,729...110,783,999
Ensembl chr 7:110,731,731...110,784,853 		JBrowse link
establishment of animal organ orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX4 iroquois homeobox 4 ISO RGD PMID:10882515 RGD:1582291 NCBI chr16:78,940,033...78,944,855
Ensembl chr16:78,937,566...78,945,269 		JBrowse link
G WNT8A Wnt family member 8A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16256739) Ensembl
MGI		 PMID:16256739 GO_REF:0000107 NCBI chr 2:140,103,322...140,113,682
Ensembl chr 2:140,103,830...140,109,862 		JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29317443) Ensembl
MGI		 PMID:29317443 GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CFAP45 cilia and flagella associated protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:90,593,864...90,626,660
Ensembl chr 4:90,593,858...90,627,800 		JBrowse link
G CFAP52 cilia and flagella associated protein 52 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:54,544,699...54,581,778
Ensembl chr12:54,544,730...54,581,742 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31107948)
(PMID:23525783)		 Ensembl
MGI		 PMID:23525783 PMID:31107948 GO_REF:0000107 NCBI chr 1:179,482,189...179,491,136
Ensembl chr 1:179,482,208...179,491,142 		JBrowse link
G ENKUR enkurin, TRPC channel interacting protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:29257953) MGI
Ensembl		 PMID:29257953 GO_REF:0000107 NCBI chr10:50,310,497...50,364,311
Ensembl chr10:50,310,984...50,341,238 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 involved_in ISO (PMID:27305836) UniProt PMID:27305836
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16720875) Ensembl
MGI		 PMID:16720875 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:16720875) UniProt
MGI		 PMID:16720875 GO_REF:0000024 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FEZF1 FEZ family zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16971467) Ensembl
MGI		 PMID:16971467 GO_REF:0000107 NCBI chr18:24,881,850...24,884,790
Ensembl chr18:24,879,031...24,884,917 		JBrowse link
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16971467) Ensembl
MGI		 PMID:16971467 GO_REF:0000107 NCBI chr13:43,953,914...43,958,419
Ensembl chr13:43,953,910...43,957,473 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:18094027) MGI PMID:18094027 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18094027) Ensembl
MGI		 PMID:18094027 GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,786...15,014,998 		JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16613831) Ensembl
MGI		 PMID:16613831 GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10625551) Ensembl
MGI		 PMID:10625551 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11060228), (PMID:11124115), (PMID:18701439) Ensembl
MGI		 PMID:11060228 PMID:11124115 PMID:18701439 GO_REF:0000107 NCBI chr 8:40,880,093...40,883,928
Ensembl chr 8:40,881,552...40,883,995 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10393115), (PMID:11163262), (PMID:11830575) Ensembl
MGI		 PMID:10393115 PMID:11163262 PMID:11830575 GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11050125), (PMID:18701439), (PMID:24528677)
(PMID:11124115)		 Ensembl
MGI		 PMID:11050125 PMID:11124115 PMID:18701439 PMID:24528677 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G SIX3 SIX homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19732765) Ensembl
MGI		 PMID:19732765 GO_REF:0000107 NCBI chr15:72,430,250...72,512,503
Ensembl chr15:72,430,726...72,512,491 		JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr15:100,733,552...100,820,603
Ensembl chr15:100,733,560...100,820,585 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24528677) Ensembl
MGI		 PMID:24528677 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G WNT2B Wnt family member 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,906,141...107,923,343
Ensembl chr 4:107,903,502...107,921,118 		JBrowse link
G WNT7B Wnt family member 7B involved_in ISO (PMID:15164427) UniProt PMID:15164427 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,288...3,572,314 		JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9169845) Ensembl
MGI		 PMID:9169845 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
growth plate cartilage axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STC1 stanniocalcin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,952,175...7,961,365
Ensembl chr14:7,950,434...7,961,566 		JBrowse link
heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26295701) Ensembl
MGI		 PMID:26295701 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:18297060) BHF-UCL PMID:18297060 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,288 		JBrowse link
G GATA5 GATA binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,824,891...61,834,742
Ensembl chr17:61,824,899...61,834,267 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,274...55,323,539 		JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in ISO (PMID:25691540) BHF-UCL PMID:25691540 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,348,410...176,479,481 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:25691540) BHF-UCL PMID:25691540 NCBI chr13:177,365,712...179,040,027
Ensembl chr13:177,365,772...179,013,542 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:28,566,279...28,760,471
Ensembl chr 1:28,566,397...28,760,467 		JBrowse link
G APLNR apelin receptor involved_in IEA Ensembl GO_REF:0000107
G ARL13B ADP ribosylation factor like GTPase 13B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22554696) Ensembl
MGI		 PMID:22554696 GO_REF:0000107 NCBI chr13:165,829,772...165,910,959
Ensembl chr13:165,828,059...165,910,961 		JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:115,210,885...115,258,863
Ensembl chr 7:115,210,891...115,258,960 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19004860) Ensembl
MGI		 PMID:19004860 GO_REF:0000107 NCBI chr 9:8,393,610...8,512,843
Ensembl chr 9:8,393,612...8,512,848 		JBrowse link
G CCDC103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chr12:18,469,705...18,474,316 JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G CFC1B cryptic, EGF-CFC family member 1B acts_upstream_of_or_within ISO (PMID:10521397) MGI PMID:10521397 NCBI chr15:56,943,183...56,951,929 JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15750185) Ensembl
MGI		 PMID:15750185 GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CLUAP1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23742838) Ensembl
MGI		 PMID:23742838 GO_REF:0000107 NCBI chr 3:38,716,562...38,753,743
Ensembl chr 3:38,716,431...38,753,748 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,617,787...63,628,965
Ensembl chr 6:63,617,789...63,628,913 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,581,687...52,590,266
Ensembl chr12:52,581,688...52,590,285 		JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10411502) Ensembl
MGI		 PMID:10411502 GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G FOLR1 folate receptor alpha involved_in ISO (PMID:17286298) BHF-UCL PMID:17286298 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402 		JBrowse link
G FOLR1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,746,014...6,750,431
Ensembl chr 9:6,746,752...6,750,799 		JBrowse link
G FOXH1 forkhead box H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:320,610...324,570
Ensembl chr 4:322,838...324,481 		JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO (PMID:15310850) BHF-UCL PMID:15310850 NCBI chr14:14,858,470...14,938,156
Ensembl chr14:14,884,662...14,939,941 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9486664) Ensembl
MGI		 PMID:9486664 GO_REF:0000107 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9500551) Ensembl
MGI		 PMID:9500551 GO_REF:0000107 NCBI chr16:68,679,977...68,683,346
Ensembl chr16:68,677,963...68,683,342 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9171826) Ensembl
MGI		 PMID:9171826 GO_REF:0000107 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,459,971...16,462,207 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14659802) Ensembl
MGI		 PMID:14659802 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18930042) Ensembl
MGI		 PMID:18930042 GO_REF:0000107 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr17:46,209,956...46,246,696
Ensembl chr17:46,210,150...46,246,674 		JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17027958) Ensembl
MGI		 PMID:17027958 GO_REF:0000107 NCBI chr13:151,298,552...151,356,715
Ensembl chr13:151,298,554...151,357,155 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,312...5,357,829 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10330409) MGI PMID:10330409 NCBI chr 2:134,932,339...135,069,408
Ensembl chr 2:134,932,615...135,069,377 		JBrowse link
G LBX1 ladybird homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12522123) Ensembl
MGI		 PMID:12522123 GO_REF:0000107 NCBI chr14:112,283,479...112,287,631
Ensembl chr14:112,284,261...112,286,216 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,274...55,323,539 		JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chr 6:106,917,995...107,043,144
Ensembl chr 6:106,917,718...107,040,079 		JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (PMID:7628699), (PMID:9192865)
(PMID:16510504)		 MGI PMID:7628699 PMID:9192865 PMID:16510504 NCBI chr16:51,086,014...51,089,165
Ensembl chr16:51,086,011...51,089,162 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16496285) Ensembl
MGI		 PMID:16496285 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17573777) Ensembl
MGI		 PMID:17573777 GO_REF:0000107 NCBI chr17:26,417,793...26,451,707
Ensembl chr17:26,417,795...26,451,928 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557208) Ensembl
MGI		 PMID:10557208 GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10411502), (PMID:10500184) Ensembl
MGI		 PMID:10411502 PMID:10500184 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G SMYD5 SMYD family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17884984) Ensembl
MGI		 PMID:17884984 GO_REF:0000107 NCBI chr 3:69,566,112...69,571,165
Ensembl chr 3:69,567,449...69,571,100 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17610846) Ensembl
MGI		 PMID:17610846 GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,854,150...76,857,148 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15929941) Ensembl
MGI		 PMID:15929941 GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr 6:164,197,511...164,266,615
Ensembl chr 6:164,197,600...164,265,818 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16155214) Ensembl
MGI		 PMID:16155214 GO_REF:0000107 NCBI chr14:113,500,001...113,628,064
Ensembl chr14:113,500,842...113,626,003 		JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15843407)
(PMID:15901664)		 Ensembl
MGI
GO_Central		 PMID:15843407 PMID:15901664 GO_REF:0000033 GO_REF:0000107 NCBI chr18:38,635,603...38,681,690
Ensembl chr18:38,635,617...38,678,133 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17460765)
(PMID:18723448)		 Ensembl
MGI		 PMID:17460765 PMID:18723448 GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TBX6 T-box transcription factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:18,271,983...18,277,864
Ensembl chr 3:18,271,983...18,277,580 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:20178780) MGI PMID:20178780 NCBI chr14:29,390,903...29,400,454
Ensembl chr14:29,390,335...29,400,440 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:11440971) UniProt PMID:11440971 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16291790) Ensembl
MGI		 PMID:16291790 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171)
(PMID:16496285)		 Ensembl
MGI		 PMID:15384171 PMID:16496285 GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
left/right axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ADP ribosylation factor like GTPase 13B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22554696) Ensembl
MGI		 PMID:22554696 GO_REF:0000107 NCBI chr13:165,829,772...165,910,959
Ensembl chr13:165,828,059...165,910,961 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20678497) Ensembl
MGI		 PMID:20678497 GO_REF:0000107 NCBI chr15:31,159,214...31,295,891
Ensembl chr15:31,159,223...31,295,893 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18930042)
(PMID:22554696)		 Ensembl
MGI		 PMID:18930042 PMID:22554696 GO_REF:0000107 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970 		JBrowse link
G IFT25 intraflagellar transport 25 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22595669) Ensembl
MGI		 PMID:22595669 GO_REF:0000107 NCBI chr 6:158,338,584...158,397,121
Ensembl chr 6:158,338,645...158,366,185 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22396656) Ensembl
MGI		 PMID:22396656 GO_REF:0000107 NCBI chr 1:115,471,904...115,526,344
Ensembl chr 1:115,471,922...115,553,524 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISO (PMID:15475956) BHF-UCL PMID:15475956 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9636176) Ensembl
MGI		 PMID:9636176 GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CLUAP1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23742838) Ensembl
MGI		 PMID:23742838 GO_REF:0000107 NCBI chr 3:38,716,562...38,753,743
Ensembl chr 3:38,716,431...38,753,748 		JBrowse link
G DMRT2 doublesex and mab-3 related transcription factor 2 NOT|acts_upstream_of_or_within ISO (PMID:21203428) MGI PMID:21203428 NCBI chr 1:220,745,493...220,799,779
Ensembl chr 1:220,745,502...220,757,324 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog (mouse) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20080492) Ensembl
MGI		 PMID:20080492 GO_REF:0000107 NCBI chr14:112,617,338...112,637,397
Ensembl chr14:112,617,398...112,637,913 		JBrowse link
G FOXJ1 forkhead box J1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10873152) Ensembl
MGI		 PMID:10873152 GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,374...5,312,106 		JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17027958) Ensembl
MGI		 PMID:17027958 GO_REF:0000107 NCBI chr13:151,298,552...151,356,715
Ensembl chr13:151,298,554...151,357,155 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within		 ISO (PMID:23063620)
(PMID:24052814)
(PMID:32203821), (PMID:32966817)		 UniProt
MGI		 PMID:23063620 PMID:24052814 PMID:32203821 PMID:32966817 NCBI chr 6:49,572,905...49,619,120
Ensembl chr&n