Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:spermatid development
go back to main search page
Accession:GO:0007286 term browser browse the term
Definition:The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.
Synonyms:exact_synonym: spermatid cell development;   spermiogenesis
 xref: Wikipedia:Spermiogenesis


show annotations for term's descendants           Sort by:
spermatid development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,768,971...6,778,613
Ensembl chr12:6,685,963...6,695,344 		JBrowse link
G ADAD1 adenosine deaminase domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15649457) Ensembl
MGI		 PMID:15649457 GO_REF:0000107 NCBI chr 4:114,574,953...114,625,948
Ensembl chr 4:125,710,502...125,760,980 		JBrowse link
G ADAD2 adenosine deaminase domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:64,856,014...64,862,493
Ensembl chr16:84,198,190...84,204,243 		JBrowse link
G ADCY10 adenylate cyclase 10 ISO RGD PMID:14697363 RGD:329412473 NCBI chr 1:143,239,576...143,404,038
Ensembl chr 1:147,023,671...147,129,705 		JBrowse link
G ADGB androglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:144,398,888...144,620,220
Ensembl chr 6:149,112,994...149,333,954 		JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr20:58,667,601...58,673,566
Ensembl chr20:59,985,358...59,991,668 		JBrowse link
G AFF4 ALF transcription elongation factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16024815) Ensembl
MGI		 PMID:16024815 GO_REF:0000107 NCBI chr 5:128,292,700...128,374,511
Ensembl chr 5:134,457,398...134,532,625 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:16513793)
(PMID:17206865)		 MGI PMID:16513793 PMID:17206865 NCBI chr2A:73,438,657...73,671,313
Ensembl chr2A:74,926,650...75,152,139 		JBrowse link
G ARMC3 armadillo repeat containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,085,591...23,196,943
Ensembl chr10:23,460,348...23,570,908 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15173597) Ensembl
MGI		 PMID:15173597 GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26490168) Ensembl
MGI		 PMID:26490168 GO_REF:0000107 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462 		JBrowse link
G CAPZA3 capping actin protein of muscle Z-line subunit alpha 3 ISO RGD PMID:9406198 RGD:69796 NCBI chr12:18,733,149...18,734,224
Ensembl chr12:19,119,771...19,120,670 		JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:38038747) Ensembl
MGI		 PMID:38038747 GO_REF:0000107 NCBI chr 7:68,965,404...69,215,833
Ensembl chr 7:82,900,402...83,027,578 		JBrowse link
G CCDC42 coiled-coil domain containing 42 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:42,908,881...42,924,815
Ensembl chr17:47,642,537...47,660,983 		JBrowse link
G CCDC62 coiled-coil domain containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:120,378,805...120,431,822
Ensembl chr12:124,615,139...124,664,052 		JBrowse link
G CCDC63 coiled-coil domain containing 63 involved_in ISO (MGI:5770027|PMID:26501274) UniProt PMID:26501274 MGI:5770027 NCBI chr12:108,417,758...108,477,163
Ensembl chr12:111,816,429...111,870,006 		JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 acts_upstream_of_or_within ISO (PMID:17784788) MGI PMID:17784788 NCBI chr14:1,182,025...1,205,471
Ensembl chr14:19,235,987...19,258,663 		JBrowse link
G CDYL chromodomain Y like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,607,088...4,790,742
Ensembl chr 6:4,737,306...4,976,777 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17130239) Ensembl
MGI		 PMID:17130239 GO_REF:0000107 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487 		JBrowse link
G CEP131 centrosomal protein 131 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24415959)
(PMID:8529672)		 Ensembl
MGI		 PMID:8529672 PMID:24415959 GO_REF:0000107 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891 		JBrowse link
G CEP57 centrosomal protein 57 involved_in ISO (MGI:3041737|PMID:12954732) HGNC-UCL PMID:12954732 MGI:3041737 NCBI chr11:90,795,277...90,838,166 JBrowse link
G CFAP73 cilia and flagella associated protein 73 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:110,753,961...110,764,103
Ensembl chr12:114,137,330...114,145,162 		JBrowse link
G CIB1 calcium and integrin binding 1 involved_in ISO (MGI:3689659|PMID:16982698) UniProt PMID:16982698 MGI:3689659 NCBI chr15:68,919,377...68,923,213 JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) MGI PMID:17515607 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075 		JBrowse link
G DDX25 DEAD-box helicase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:120,718,758...120,738,527
Ensembl chr11:124,632,841...124,667,585 		JBrowse link
G DHH desert hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17495005) Ensembl
MGI
RGD		 PMID:17495005 PMID:21893610 GO_REF:0000107 RGD:150573809 NCBI chr12:39,656,046...39,661,439
Ensembl chr12:40,535,740...40,541,123 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17696610) Ensembl
MGI		 PMID:17696610 GO_REF:0000107 NCBI chr22:19,433,989...19,485,804
Ensembl chr22:37,253,609...37,305,769 		JBrowse link
G DPY19L2 dpy-19 like 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:21397063), (PMID:21397064)
(PMID:22764053)
(MGI:6865809|PMID:34471926)		 UniProt
MGI		 PMID:21397063 PMID:21397064 PMID:22764053 PMID:34471926 MGI:6865809 NCBI chr12:25,275,612...25,379,087 JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:8006076 RGD:13207350 NCBI chr14:82,584,876...82,670,750
Ensembl chr14:102,406,993...102,489,475 		JBrowse link
G DYNLL1 dynein light chain LC8-type 1 ISO RGD PMID:15983119 RGD:13208521 NCBI chr12:118,078,401...118,080,822
Ensembl chr12:121,452,118...121,454,550 		JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17599069) Ensembl
MGI		 PMID:17599069 GO_REF:0000107 NCBI chr 6:31,542,946...31,560,894
Ensembl chr 6:32,429,271...32,451,844 		JBrowse link
G EIF4G3 eukaryotic translation initiation factor 4 gamma 3 involved_in ISO (PMID:35951695) UniProt PMID:35951695 NCBI chr 1:19,755,217...20,123,490
Ensembl chr 1:20,800,597...21,165,755 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,398,557...32,509,146
Ensembl chr10:32,985,456...33,095,070 		JBrowse link
G FAM209B family with sequence similarity 209 member B involved_in ISO (MGI:6865809|PMID:34471926) UniProt PMID:34471926 MGI:6865809 NCBI chr20:52,865,695...52,878,805
Ensembl chr20:54,161,366...54,163,910 		JBrowse link
G FAM9A family with sequence similarity 9 member A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:1,309,417...1,318,806
Ensembl chr  X:8,685,789...8,693,707 		JBrowse link
G FAM9B family with sequence similarity 9 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:1,620,668...1,629,061
Ensembl chr  X:8,910,872...8,920,840 		JBrowse link
G FAM9C family with sequence similarity 9 member C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:5,647,848...5,657,551
Ensembl chr  X:12,936,617...12,945,919 		JBrowse link
G FANCG FA complementation group G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11823446) Ensembl
MGI		 PMID:11823446 GO_REF:0000107 NCBI chr 9:34,924,399...34,931,077
Ensembl chr 9:35,730,176...35,736,648 		JBrowse link
G FNDC3A fibronectin type III domain containing 3A acts_upstream_of_or_within ISO (PMID:16904100)
(PMID:1759682), (PMID:2164218)		 MGI PMID:1759682 PMID:2164218 PMID:16904100 NCBI chr13:30,119,740...30,347,544
Ensembl chr13:48,820,018...49,049,274 		JBrowse link
G FSHR follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11466221), (PMID:15973687) Ensembl
MGI		 PMID:11466221 PMID:15973687 GO_REF:0000107 NCBI chr2A:49,088,450...49,287,688
Ensembl chr2A:50,008,328...50,207,258 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:177,948,040...178,012,705 JBrowse link
G GALNTL5 polypeptide N-acetylgalactosaminyltransferase like 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:143,546,728...143,599,258
Ensembl chr 7:155,700,379...155,746,025 		JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO RGD PMID:17375205 RGD:2301985 NCBI chr19:32,479,559...32,491,959
Ensembl chr19:41,216,758...41,228,750 		JBrowse link
G GLI1 GLI family zinc finger 1 ISO RGD PMID:21893610 RGD:150573809 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G HOOK1 hook microtubule tethering protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12075009) Ensembl
MGI		 PMID:12075009 GO_REF:0000107 NCBI chr 1:59,072,565...59,134,191
Ensembl chr 1:60,777,769...60,839,384 		JBrowse link
G HSPA2 heat shock protein family A (Hsp70) member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8622925) Ensembl
MGI		 PMID:8622925 GO_REF:0000107 NCBI chr14:45,124,326...45,127,105
Ensembl chr14:63,373,840...63,375,762 		JBrowse link
G ICA1L islet cell autoantigen 1 like acts_upstream_of_or_within ISO (PMID:26306493) MGI PMID:26306493 NCBI chr2B:90,034,205...90,105,600
Ensembl chr2B:208,184,023...208,251,254 		JBrowse link
G IFT56 intraflagellar transport 56 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7317942) Ensembl
MGI		 PMID:7317942 GO_REF:0000107 NCBI chr 7:131,092,241...131,150,109
Ensembl chr 7:143,579,500...143,636,362 		JBrowse link
G ING2 inhibitor of growth family member 2 involved_in ISO (MGI:4867787|PMID:21124965) BHF-UCL PMID:21124965 MGI:4867787 NCBI chr 4:175,683,040...175,689,646
Ensembl chr 4:187,909,495...187,915,674 		JBrowse link
G INSL6 insulin like 6 acts_upstream_of_or_within ISO (PMID:19520787) MGI PMID:19520787 NCBI chr 9:5,007,158...5,029,056
Ensembl chr 9:5,192,023...5,213,827 		JBrowse link
G IQCG IQ motif containing G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24362311) Ensembl
MGI		 PMID:24362311 GO_REF:0000107 NCBI chr 3:195,316,220...195,396,328
Ensembl chr 3:205,185,927...205,268,692 		JBrowse link
G IQCN IQ motif containing N involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:17,732,673...17,750,226
Ensembl chr19:18,708,155...18,719,021 		JBrowse link
G JAM2 junctional adhesion molecule 2 involved_in ISO (MGI:3054279|PMID:15372036) UniProt PMID:15372036 MGI:3054279 NCBI chr21:12,084,083...12,162,615
Ensembl chr21:25,441,765...25,519,304 		JBrowse link
G JAM3 junctional adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15372036) Ensembl
MGI		 PMID:15372036 GO_REF:0000107 NCBI chr11:128,916,024...129,006,497
Ensembl chr11:132,783,580...132,864,657 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18308723) Ensembl
MGI		 PMID:18308723 GO_REF:0000107 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473 		JBrowse link
G KLC3 kinesin light chain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,293,515...42,300,592
Ensembl chr19:50,887,900...50,898,689 		JBrowse link
G KLHL10 kelch like family member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15136734) Ensembl
MGI		 PMID:15136734 GO_REF:0000107 NCBI chr17:15,465,507...15,478,190
Ensembl chr17:15,684,157...15,696,563 		JBrowse link
G LOC100988353 septin-4 acts_upstream_of_or_within ISO (PMID:15737931) MGI PMID:15737931 NCBI chr17:52,595,185...52,607,020
Ensembl chr17:57,448,904...57,472,690 		JBrowse link
G LOC100988671 histone H3.3A acts_upstream_of_or_within ISO (PMID:25675407) MGI PMID:25675407 NCBI chr17:69,728,165...69,730,519
Ensembl chr17:75,277,614...75,281,106 		JBrowse link
G LOC129394329 pachytene checkpoint protein 2 homolog acts_upstream_of_or_within ISO (PMID:17696610) MGI PMID:17696610
G MEI1 meiotic double-stranded break formation protein 1 acts_upstream_of_or_within ISO (PMID:17696610) MGI PMID:17696610 NCBI chr22:22,592,508...22,692,370
Ensembl chr22:40,678,001...40,777,076 		JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,725,114...12,744,974
Ensembl chr17:12,901,882...12,920,285 		JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27107036) Ensembl
MGI		 PMID:27107036 GO_REF:0000107 NCBI chr 1:102,696,558...102,741,630 JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15772095) Ensembl
MGI		 PMID:15772095 GO_REF:0000107 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10733589) Ensembl
MGI		 PMID:10733589 GO_REF:0000107 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024 		JBrowse link
G NME5 NME/NM23 family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21746835)
(PMID:19303412)		 Ensembl
MGI		 PMID:19303412 PMID:21746835 GO_REF:0000107 NCBI chr 5:133,493,930...133,517,906
Ensembl chr 5:139,628,678...139,651,372 		JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:6,921,073...6,953,622
Ensembl chr 5:6,596,414...6,629,121 		JBrowse link
G NUP210L nucleoporin 210 like acts_upstream_of_or_within ISO (PMID:20034429) MGI PMID:20034429 NCBI chr 1:129,349,468...129,510,688
Ensembl chr 1:132,977,876...133,125,344 		JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7317942) Ensembl
MGI		 PMID:7317942 GO_REF:0000107 NCBI chr15:1,811,728...2,192,018
Ensembl chr15:25,181,386...25,523,774 		JBrowse link
G ODF2 outer dense fiber of sperm tails 2 ISO RGD PMID:9698445 RGD:69913 NCBI chr 9:99,577,891...99,623,581
Ensembl chr 9:128,245,049...128,291,202 		JBrowse link
G OSBP2 oxysterol binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24245814) Ensembl
MGI		 PMID:24245814 GO_REF:0000107 NCBI chr22:11,719,017...11,933,841
Ensembl chr22:29,520,479...29,733,061 		JBrowse link
G PACRG parkin coregulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15148410) Ensembl
MGI		 PMID:15148410 GO_REF:0000107 NCBI chr 6:160,677,517...161,261,350
Ensembl chr 6:165,679,339...166,258,025 		JBrowse link
G PANK2 pantothenate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15525657) Ensembl
MGI		 PMID:15525657 GO_REF:0000107 NCBI chr20:3,924,054...3,959,393
Ensembl chr20:3,723,211...3,757,748 		JBrowse link
G PDILT protein disulfide isomerase like, testis expressed acts_upstream_of_or_within ISO (PMID:22357757) MGI PMID:22357757 NCBI chr16:17,908,332...17,953,992
Ensembl chr16:20,455,557...20,495,734 		JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 ISO RGD PMID:9508097 RGD:1357207 NCBI chr12:115,716,953...115,726,412
Ensembl chr12:119,093,952...119,105,054 		JBrowse link
G PITHD1 PITH domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31915251) Ensembl
MGI		 PMID:31915251 GO_REF:0000107 NCBI chr 1:22,970,081...22,979,841
Ensembl chr 1:23,954,980...23,964,085 		JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:127,951,178...127,986,173
Ensembl chr12:132,169,820...132,199,374 		JBrowse link
G PLD6 phospholipase D family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,084,634...34,091,470
Ensembl chr17:39,016,859...39,023,398 		JBrowse link
G PPP2R2B protein phosphatase 2 regulatory subunit Bbeta ISO RGD PMID:8389301 RGD:633587 NCBI chr 5:142,037,831...142,521,655
Ensembl chr 5:148,050,581...148,533,329 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15713832 RGD:1599621 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G PRM1 protamine 1 acts_upstream_of_or_within ISO (PMID:11326282) MGI PMID:11326282 NCBI chr16:10,222,779...10,223,289 JBrowse link
G PRM2 protamine 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11326282) InterPro
MGI
TreeGrafter		 PMID:11326282 GO_REF:0000002 GO_REF:0000118 NCBI chr16:10,217,586...10,218,446
Ensembl chr16:11,439,417...11,440,265 		JBrowse link
G PTCH1 patched 1 ISO RGD PMID:21893610 RGD:150573809 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453 		JBrowse link
G PYGO1 pygopus family PHD finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637336) Ensembl
MGI		 PMID:23637336 GO_REF:0000107 NCBI chr15:34,509,787...34,556,686
Ensembl chr15:52,838,651...52,879,630 		JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637336) Ensembl
MGI		 PMID:23637336 GO_REF:0000107 NCBI chr 1:130,305,547...130,310,270
Ensembl chr 1:133,912,411...133,920,308 		JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (PMID:15148410) MGI PMID:15148410 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RAN RAN, member RAS oncogene family ISO RGD PMID:12211070 RGD:727421 NCBI chr12:128,497,407...128,503,049
Ensembl chr12:132,694,498...132,699,668 		JBrowse link
G REC8 REC8 meiotic recombination protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17696610) Ensembl
MGI		 PMID:17696610 GO_REF:0000107 NCBI chr14:4,948,100...4,956,492
Ensembl chr14:23,071,724...23,079,948 		JBrowse link
G RFX2 regulatory factor X2 involved_in ISO (MGI:5699785|PMID:26248850), (MGI:5708804|PMID:26162102), (MGI:5763317|PMID:26853561) UniProt PMID:26162102 PMID:26248850 PMID:26853561 MGI:5699785 MGI:5708804 MGI:5763317 NCBI chr19:5,013,823...5,132,451
Ensembl chr19:5,942,100...5,996,094 		JBrowse link
G RIMBP3C RIMS binding protein 3C involved_in ISO (MGI:3830438|PMID:19091768) ParkinsonsUK-UCL PMID:19091768 MGI:3830438 NCBI chr22:3,668,133...3,673,619 JBrowse link
G RNF17 ring finger protein 17 acts_upstream_of_or_within ISO (PMID:16093322) MGI PMID:16093322 NCBI chr13:6,056,496...6,172,231
Ensembl chr13:24,346,898...24,460,945 		JBrowse link
G RSPH1 radial spoke head component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18453535) Ensembl
MGI
TreeGrafter		 PMID:18453535 GO_REF:0000107 GO_REF:0000118 NCBI chr21:28,779,994...28,804,130
Ensembl chr21:42,098,212...42,121,610 		JBrowse link
G SBF1 SET binding factor 1 ISO RGD PMID:27335132 RGD:38549340 NCBI chr22:30,691,976...30,723,128
Ensembl chr22:49,676,467...49,704,633 		JBrowse link
G SEC23IP SEC23 interacting protein acts_upstream_of_or_within ISO (PMID:21640725) MGI PMID:21640725 NCBI chr10:116,460,187...116,510,830
Ensembl chr10:119,876,408...119,928,064 		JBrowse link
G SEPTIN14 septin 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:56,395,962...56,467,826
Ensembl chr 7:56,830,212...56,890,798 		JBrowse link
G SIX5 SIX homeobox 5 acts_upstream_of_or_within ISO (PMID:15163633) MGI PMID:15163633 NCBI chr19:42,774,240...42,779,026 JBrowse link
G SLC35A3 solute carrier family 35 member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,625,605...102,701,687 JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within ISO (PMID:23976951) MGI PMID:23976951 NCBI chr14:58,262,126...58,271,829
Ensembl chr14:77,462,875...77,516,882 		JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:22215678 RGD:9586361 NCBI chr 9:1,818,004...1,997,652
Ensembl chr 9:2,013,237...2,189,409 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:22215678 RGD:9586361 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO RGD PMID:22215678 RGD:9586361 NCBI chr17:16,633,982...16,660,502
Ensembl chr17:16,860,400...16,884,946 		JBrowse link
G SOX30 SRY-box transcription factor 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:153,022,109...153,067,734
Ensembl chr 5:159,640,126...159,737,776 		JBrowse link
G SPACDR sperm acrosome developmental regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,485,588...92,493,539
Ensembl chr 7:105,887,295...105,894,117 		JBrowse link
G SPATA16 spermatogenesis associated 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:169,898,861...170,156,969
Ensembl chr 3:178,079,118...178,335,617 		JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21705336) InterPro
MGI		 PMID:21705336 GO_REF:0000002 NCBI chr 4:67,101,686...67,113,671 JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17696610) Ensembl
MGI		 PMID:17696610 GO_REF:0000107 NCBI chr20:53,669,128...53,684,328
Ensembl chr20:54,948,661...54,963,384 		JBrowse link
G STK11 serine/threonine kinase 11 involved_in ISO (MGI:3829517|PMID:18774945) UniProt PMID:18774945 MGI:3829517 Ensembl chr19:1,188,537...1,210,677 JBrowse link
G STRBP spermatid perinuclear RNA binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11336498) Ensembl
MGI		 PMID:11336498 GO_REF:0000107 NCBI chr 9:94,249,017...94,395,796
Ensembl chr 9:122,586,575...122,640,167 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling ISO RGD PMID:21893610 RGD:150573809 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472 		JBrowse link
G SUN5 Sad1 and UNC84 domain containing 5 involved_in ISO (MGI:5916674|PMID:28945193) UniProt PMID:28945193 MGI:5916674 NCBI chr20:29,269,845...29,290,474
Ensembl chr20:30,388,096...30,408,883 		JBrowse link
G SYCP3 synaptonemal complex protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:99,311,260...99,322,007
Ensembl chr12:102,711,837...102,720,728 		JBrowse link
G TAF7L TATA-box binding protein associated factor 7 like acts_upstream_of_or_within ISO (PMID:17242199) MGI PMID:17242199 NCBI chr  X:90,471,354...90,496,618
Ensembl chr  X:100,607,488...100,631,301 		JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex acts_upstream_of_or_within ISO (PMID:10369260) MGI PMID:10369260 NCBI chr12:35,246,937...35,253,378
Ensembl chr12:36,031,818...36,038,008 		JBrowse link
G TDRD5 tudor domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:155,080,083...155,171,734
Ensembl chr 1:158,761,013...158,852,660 		JBrowse link
G TMF1 TATA element modulatory factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23000399)
(PMID:20691678)		 Ensembl
MGI		 PMID:20691678 PMID:23000399 GO_REF:0000107 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460 		JBrowse link
G TNK2 tyrosine kinase non receptor 2 involved_in ISO (MGI:6246359|PMID:23562806) UniProt PMID:23562806 MGI:6246359 NCBI chr 3:193,254,017...193,302,863 JBrowse link
G TNP1 transition protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212 		JBrowse link
G TSSK1B testis specific serine kinase 1B involved_in ISO (MGI:3801547|PMID:18533145) UniProt PMID:18533145 MGI:3801547 NCBI chr 5:108,790,115...108,794,426 JBrowse link
G TSSK2 testis specific serine kinase 2 involved_in ISO (MGI:3801547|PMID:18533145) UniProt PMID:18533145 MGI:3801547 NCBI chr22:1,885,099...1,887,139
Ensembl chr22:17,563,492...17,564,568 		JBrowse link
G TSSK4 testis specific serine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,980,178...4,984,291
Ensembl chr14:23,104,197...23,108,037 		JBrowse link
G TTC21A tetratricopeptide repeat domain 21A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,003,730...39,035,183
Ensembl chr 3:39,284,480...39,315,375 		JBrowse link
G TUBA8 tubulin alpha 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:1,541,154...1,561,852
Ensembl chr22:16,936,405...16,989,730 		JBrowse link
G UBE2J1 ubiquitin conjugating enzyme E2 J1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25320092) Ensembl
MGI		 PMID:25320092 GO_REF:0000107 NCBI chr 6:87,196,938...87,223,414
Ensembl chr 6:90,471,136...90,497,334 		JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (PMID:15824319), (PMID:17035640) MGI PMID:15824319 PMID:17035640 NCBI chr17:7,319,186...7,325,594
Ensembl chr17:7,306,548...7,312,632 		JBrowse link
G YTHDC2 YTH N6-methyladenosine RNA binding protein C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:108,870,417...108,951,848
Ensembl chr 5:114,672,839...114,754,153 		JBrowse link
G ZFP42 ZFP42 zinc finger protein acts_upstream_of_or_within ISO (PMID:21641340) MGI PMID:21641340 NCBI chr 4:180,152,673...180,162,899
Ensembl chr 4:192,349,144...192,350,076 		JBrowse link
G ZMYND15 zinc finger MYND-type containing 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20675388) Ensembl
MGI		 PMID:20675388 GO_REF:0000107 NCBI chr17:4,795,541...4,801,947
Ensembl chr17:4,786,214...4,791,760 		JBrowse link
acrosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACRBP acrosin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,768,971...6,778,613
Ensembl chr12:6,685,963...6,695,344 		JBrowse link
G ACTL7A actin like 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:80,014,898...80,016,379
Ensembl chr 9:108,188,166...108,189,473 		JBrowse link
G ACTL9 actin like 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,992,891...7,994,357
Ensembl chr19:8,837,899...8,839,149 		JBrowse link
G AGFG1 ArfGAP with FG repeats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11711676), (PMID:14724135) TreeGrafter
MGI		 PMID:11711676 PMID:14724135 GO_REF:0000118 NCBI chr2B:114,711,697...114,800,680
Ensembl chr2B:233,542,185...233,604,897 		JBrowse link
G AGFG2 ArfGAP with FG repeats 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:92,566,281...92,595,374
Ensembl chr 7:105,967,731...105,997,467 		JBrowse link
G CCDC136 coiled-coil domain containing 136 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:120,743,177...120,774,401
Ensembl chr 7:133,267,217...133,298,936 		JBrowse link
G CCDC38 coiled-coil domain containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:93,459,847...93,534,527
Ensembl chr12:96,849,800...96,903,044 		JBrowse link
G CCDC42 coiled-coil domain containing 42 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26945718) Ensembl
MGI		 PMID:26945718 GO_REF:0000107 NCBI chr17:42,908,881...42,924,815
Ensembl chr17:47,642,537...47,660,983 		JBrowse link
G FABP9 fatty acid binding protein 9 ISO RGD PMID:7958448 RGD:634410 NCBI chr 8:77,981,007...77,984,333
Ensembl chr 8:79,604,583...79,607,728 		JBrowse link
G FAM209B family with sequence similarity 209 member B involved_in ISO (MGI:6865809|PMID:34471926) UniProt PMID:34471926 MGI:6865809 NCBI chr20:52,865,695...52,878,805
Ensembl chr20:54,161,366...54,163,910 		JBrowse link
G GARIN1A golgi associated RAB2 interactor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:120,623,601...120,640,187
Ensembl chr 7:133,148,605...133,159,626 		JBrowse link
G GARIN1B golgi associated RAB2 interactor 1B involved_in ISO (MGI:6814641|PMID:34714330) UniProt PMID:34714330 MGI:6814641 NCBI chr 7:120,649,308...120,684,035 JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (PMID:29991750) MGI PMID:29991750 NCBI chr 1:34,701,571...34,825,628
Ensembl chr 1:35,879,029...36,002,516 		JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27107036) Ensembl
MGI		 PMID:27107036 GO_REF:0000107 NCBI chr 1:102,696,558...102,741,630 JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10733589) Ensembl
MGI
TreeGrafter		 PMID:10733589 GO_REF:0000107 GO_REF:0000118 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:13129914) Ensembl
MGI		 PMID:13129914 GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PDCL2 phosducin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:36278277) Ensembl
MGI		 PMID:36278277 GO_REF:0000107 NCBI chr 4:68,343,615...68,381,364
Ensembl chr 4:74,907,904...74,944,895 		JBrowse link
G PFN4 profilin family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:24,110,565...24,120,024
Ensembl chr2A:24,209,163...24,217,262 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20424323) Ensembl
MGI		 PMID:20424323 GO_REF:0000107 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160 		JBrowse link
G PLN phospholamban involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:116,357,335...116,370,382
Ensembl chr 6:120,509,510...120,509,668 		JBrowse link
G POC1B POC1 centriolar protein B acts_upstream_of_or_within ISO (PMID:30298696) MGI PMID:30298696 NCBI chr12:86,946,987...87,053,789
Ensembl chr12:90,267,217...90,373,682 		JBrowse link
G PVR PVR cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:41,592,042...41,614,397
Ensembl chr19:50,196,980...50,217,006 		JBrowse link
G RFX2 regulatory factor X2 involved_in ISO (MGI:5708804|PMID:26162102) UniProt PMID:26162102 MGI:5708804 NCBI chr19:5,013,823...5,132,451
Ensembl chr19:5,942,100...5,996,094 		JBrowse link
G SEC23IP SEC23 interacting protein acts_upstream_of_or_within ISO (PMID:21640725) MGI PMID:21640725 NCBI chr10:116,460,187...116,510,830
Ensembl chr10:119,876,408...119,928,064 		JBrowse link
G SLC35A3 solute carrier family 35 member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,625,605...102,701,687 JBrowse link
G SLC9A8 solute carrier family 9 member A8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,155,299...46,234,418
Ensembl chr20:47,217,765...47,296,603 		JBrowse link
G SLMAP sarcolemma associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:57,688,669...57,864,355
Ensembl chr 3:59,108,247...59,280,713 		JBrowse link
G SPACA1 sperm acrosome associated 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949614) Ensembl
MGI
TreeGrafter		 PMID:22949614 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:85,925,861...85,944,492
Ensembl chr 6:89,198,031...89,216,671 		JBrowse link
G SPINK2 serine peptidase inhibitor Kazal type 2 involved_in ISO (MGI:6114299|PMID:28554943) UniProt PMID:28554943 MGI:6114299 NCBI chr 4:67,101,686...67,113,671 JBrowse link
G SPPL2C signal peptide peptidase like 2C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,323,494...11,325,924
Ensembl chr17:11,637,880...11,639,934 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032 		JBrowse link
G TBPL1 TATA-box binding protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11861477) Ensembl
MGI		 PMID:11861477 GO_REF:0000107 NCBI chr 6:131,719,606...131,754,960
Ensembl chr 6:135,817,613...135,852,876 		JBrowse link
G TMF1 TATA element modulatory factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20691678) Ensembl
MGI		 PMID:20691678 GO_REF:0000107 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460 		JBrowse link
G TMPRSS12 transmembrane serine protease 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:37,865,660...37,908,657
Ensembl chr12:38,768,072...38,810,372 		JBrowse link
G TXNDC8 thioredoxin domain containing 8 ISO RGD PMID:15181017 RGD:1303999 NCBI chr 9:81,458,398...81,492,855
Ensembl chr 9:109,624,698...109,658,849 		JBrowse link
G VPS13B vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:95,659,443...96,525,316
Ensembl chr 8:97,860,720...98,698,271 		JBrowse link
G ZPBP zona pellucida binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664285) TreeGrafter
MGI		 PMID:17664285 GO_REF:0000118 NCBI chr 7:50,576,485...50,735,411
Ensembl chr 7:50,826,058...50,981,644 		JBrowse link
G ZPBP2 zona pellucida binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664285) Ensembl
MGI
TreeGrafter		 PMID:17664285 GO_REF:0000107 GO_REF:0000118 NCBI chr17:17,410,278...17,420,458
Ensembl chr17:17,630,126...17,639,771 		JBrowse link
intramanchette transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP131 centrosomal protein 131 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24415959) Ensembl
MGI		 PMID:24415959 GO_REF:0000107 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891 		JBrowse link
G SPAG17 sperm associated antigen 17 involved_in ISO (MGI:6192801|PMID:29690537) UniProt PMID:29690537 MGI:6192801 NCBI chr 1:84,339,906...84,571,723 JBrowse link
manchette assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXDND1 axonemal dynein light chain domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:154,847,978...155,043,339
Ensembl chr 1:158,536,967...158,724,251 		JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:38038747) Ensembl
MGI		 PMID:38038747 GO_REF:0000107 NCBI chr 7:68,965,404...69,215,833
Ensembl chr 7:82,900,402...83,027,578 		JBrowse link
G CEP131 centrosomal protein 131 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24415959) Ensembl
MGI		 PMID:24415959 GO_REF:0000107 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 involved_in ISO (MGI:6721190|PMID:34124066) UniProt PMID:34124066 MGI:6721190 NCBI chr18:43,597,731...43,647,238
Ensembl chr18:46,955,364...46,994,771 		JBrowse link
G HOOK1 hook microtubule tethering protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16540102), (PMID:9674995) Ensembl
MGI		 PMID:9674995 PMID:16540102 GO_REF:0000107 NCBI chr 1:59,072,565...59,134,191
Ensembl chr 1:60,777,769...60,839,384 		JBrowse link
G IFT56 intraflagellar transport 56 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9674995) Ensembl
MGI		 PMID:9674995 GO_REF:0000107 NCBI chr 7:131,092,241...131,150,109
Ensembl chr 7:143,579,500...143,636,362 		JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 acts_upstream_of_or_within ISO (PMID:23258628) MGI PMID:23258628 NCBI chr10:14,957,096...14,975,737 JBrowse link
G PFN4 profilin family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:24,110,565...24,120,024
Ensembl chr2A:24,209,163...24,217,262 		JBrowse link
G SPAG17 sperm associated antigen 17 involved_in ISO (MGI:6192801|PMID:29690537) UniProt PMID:29690537 MGI:6192801 NCBI chr 1:84,339,906...84,571,723 JBrowse link
manchette disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH6A radial spoke head 6 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,805,151...42,824,725
Ensembl chr19:51,342,729...51,361,239 		JBrowse link
negative regulation of sperm capacitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAEP progestagen associated endometrial protein involved_in ISO (PMID:15883155) UniProt PMID:15883155 NCBI chr 9:106,669,550...106,681,918 JBrowse link
positive regulation of flagellated sperm motility involved in capacitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR6 C-C motif chemokine receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:165,094,563...165,109,774
Ensembl chr 6:170,069,689...170,084,779 		JBrowse link
G DEFB1 defensin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:403,268...410,712
Ensembl chr 8:6,874,235...6,881,631 		JBrowse link
G IQCF1 IQ motif containing F1 involved_in ISO (MGI:5708001|PMID:25380116) UniProt PMID:25380116 MGI:5708001 NCBI chr 3:51,836,683...51,847,503
Ensembl chr 3:53,068,302...53,076,490 		JBrowse link
G RNASE9 ribonuclease A family member 9 (inactive) acts_upstream_of_or_within ISO (PMID:24719258) MGI PMID:24719258 NCBI chr14:1,421,047...1,425,872
Ensembl chr14:19,478,278...19,480,838 		JBrowse link
positive regulation of sperm capacitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM7 ADAM metallopeptidase domain 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:23,710,208...23,778,026
Ensembl chr 8:20,627,325...20,713,165 		JBrowse link
G TMPRSS12 transmembrane serine protease 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:37,865,660...37,908,657
Ensembl chr12:38,768,072...38,810,372 		JBrowse link
proacrosomal vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (PMID:29991750) MGI PMID:29991750 NCBI chr 1:34,701,571...34,825,628
Ensembl chr 1:35,879,029...36,002,516 		JBrowse link
G SOX30 SRY-box transcription factor 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:153,022,109...153,067,734
Ensembl chr 5:159,640,126...159,737,776 		JBrowse link
regulation of sperm capacitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCP11 t-complex 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:34,680,570...34,703,230
Ensembl chr 6:35,776,684...35,799,480 		JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:107,296,088...107,495,623
Ensembl chr 6:111,344,834...111,539,932 		JBrowse link
G ARMC2 armadillo repeat containing 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:106,650,907...106,777,544
Ensembl chr 6:110,701,552...110,826,937 		JBrowse link
G BBOF1 basal body orientation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:54,578,549...54,637,331
Ensembl chr14:73,434,030...73,478,079 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15539463) Ensembl
MGI		 PMID:15539463 GO_REF:0000107 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053 		JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:68,965,404...69,215,833
Ensembl chr 7:82,900,402...83,027,578 		JBrowse link
G CEP131 centrosomal protein 131 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24415959) Ensembl
MGI		 PMID:24415959 GO_REF:0000107 NCBI chr17:75,614,593...75,648,730
Ensembl chr17:81,343,396...81,376,891 		JBrowse link
G CFAP157 cilia and flagella associated protein 157 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:98,825,719...98,834,780
Ensembl chr 9:127,497,791...127,506,177 		JBrowse link
G CFAP206 cilia and flagella associated protein 206 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:85,252,905...85,341,418
Ensembl chr 6:88,561,373...88,615,960 		JBrowse link
G CFAP43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29522859)
(PMID:31884020)		 Ensembl
MGI
TreeGrafter		 PMID:29522859 PMID:31884020 GO_REF:0000107 GO_REF:0000118 NCBI chr10:100,729,982...100,831,694
Ensembl chr10:104,188,653...104,290,557 		JBrowse link
G CFAP44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29522859) Ensembl
MGI		 PMID:29522859 GO_REF:0000107 NCBI chr 3:110,432,619...110,587,517
Ensembl chr 3:117,355,403...117,510,045 		JBrowse link
G CFAP47 cilia and flagella associated protein 47 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:28,567,102...29,031,601
Ensembl chr  X:36,200,790...36,662,304 		JBrowse link
G CFAP58 cilia and flagella associated protein 58 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32791035) Ensembl
MGI		 PMID:32791035 GO_REF:0000107 NCBI chr10:100,905,434...101,056,560
Ensembl chr10:104,412,171...104,514,920 		JBrowse link
G CFAP65 cilia and flagella associated protein 65 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:106,260,872...106,299,594
Ensembl chr2B:224,854,262...224,892,490 		JBrowse link
G CFAP69 cilia and flagella associated protein 69 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30415212) MGI
Ensembl		 PMID:30415212 GO_REF:0000107 NCBI chr 7:82,254,266...82,353,873
Ensembl chr 7:95,856,393...95,922,012 		JBrowse link
G CFAP97D1 CFAP97 domain containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:13,612,308...13,618,791
Ensembl chr17:13,779,785...13,783,284 		JBrowse link
G DNAH1 dynein axonemal heavy chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,233,271...52,342,627
Ensembl chr 3:53,491,822...53,572,393 		JBrowse link
G DRC7 dynein regulatory complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,970,908...38,008,156
Ensembl chr16:57,103,720...57,139,220 		JBrowse link
G FSIP2 fibrous sheath interacting protein 2 acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (PMID:30137358), (PMID:30745215) UniProt
Ensembl		 PMID:30137358 PMID:30745215 GO_REF:0000107 NCBI chr2B:73,019,091...73,112,974
Ensembl chr2B:190,864,813...190,915,369 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:21337470) MGI PMID:21337470 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G IQCG IQ motif containing G involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:195,316,220...195,396,328
Ensembl chr 3:205,185,927...205,268,692 		JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:23258628) MGI PMID:23258628 NCBI chr10:14,957,096...14,975,737 JBrowse link
G MNS1 meiosis specific nuclear structural 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:35,377,490...35,433,871
Ensembl chr15:53,714,110...53,750,050 		JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585928) Ensembl
MGI		 PMID:11585928 GO_REF:0000107 NCBI chr10:100,093,614...100,192,485 JBrowse link
G PDCL2 phosducin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:36278277) Ensembl
MGI		 PMID:36278277 GO_REF:0000107 NCBI chr 4:68,343,615...68,381,364
Ensembl chr 4:74,907,904...74,944,895 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20424323) Ensembl
MGI		 PMID:20424323 GO_REF:0000107 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160 		JBrowse link
G SPAG16 sperm associated antigen 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15328412) Ensembl
MGI		 PMID:15328412 GO_REF:0000107 NCBI chr2B:100,539,441...101,666,204
Ensembl chr2B:219,014,837...220,139,314 		JBrowse link
G SPAG6 sperm associated antigen 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:22,502,032...22,574,184
Ensembl chr10:22,877,396...22,949,504 		JBrowse link
G SPEF2 sperm flagellar 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21715716) TreeGrafter
MGI		 PMID:21715716 GO_REF:0000118 NCBI chr 5:74,554,017...74,751,921
Ensembl chr 5:79,834,733...80,031,599 		JBrowse link
G TBC1D21 TBC1 domain family member 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:52,783,013...52,798,656
Ensembl chr15:71,538,363...71,553,960 		JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within ISO (PMID:12242242) MGI PMID:12242242 NCBI chr19:614,279...625,715 JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:108,194,610...108,253,161
Ensembl chr11:112,037,620...112,106,537 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20498047)
(PMID:20442420)		 Ensembl
MGI		 PMID:20442420 PMID:20498047 GO_REF:0000107 NCBI chr22:23,924,628...23,973,282
Ensembl chr22:42,128,224...42,174,850 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (PMID:23558686) MGI PMID:23558686 NCBI chr14:56,216,214...56,513,718
Ensembl chr14:75,058,897...75,356,494 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,606,271...108,617,000
Ensembl chr  X:119,034,235...119,049,655 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12672659) Ensembl
MGI		 PMID:12672659 GO_REF:0000107 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609 		JBrowse link
G ZMYND12 zinc finger MYND-type containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,725,736...41,756,324
Ensembl chr 1:43,110,890...43,136,487 		JBrowse link
sperm capacitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:67,780,453...67,891,454
Ensembl chr15:86,987,070...87,095,818 		JBrowse link
G BSPH1 binder of sperm protein homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22539676) Ensembl
MGI
TreeGrafter		 PMID:22539676 GO_REF:0000107 GO_REF:0000118 NCBI chr19:44,907,826...44,933,116
Ensembl chr19:53,559,937...53,583,726 		JBrowse link
G C2CD6 C2 calcium dependent domain containing 6 involved_in ISO (MGI:6874530|PMID:34998468) UniProt PMID:34998468 MGI:6874530 NCBI chr2B:88,742,121...88,873,268 JBrowse link
G CABYR calcium binding tyrosine phosphorylation regulated involved_in IEA InterPro GO_REF:0000002 NCBI chr18:17,391,217...17,414,683
Ensembl chr18:21,014,584...21,037,082 		JBrowse link
G CATSPER2 cation channel sperm associated 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14657366) TreeGrafter
MGI		 PMID:14657366 GO_REF:0000118 Ensembl chr15:40,769,539...40,795,723 JBrowse link
G CATSPER3 cation channel sperm associated 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17227845) Ensembl
MGI
TreeGrafter		 PMID:17227845 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:130,362,139...130,406,888
Ensembl chr 5:136,503,846...136,548,162 		JBrowse link
G CATSPER4 cation channel sperm associated 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17227845) Ensembl
MGI
TreeGrafter		 PMID:17227845 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:25,451,655...25,464,069
Ensembl chr 1:26,518,287...26,531,263 		JBrowse link
G CATSPERD cation channel sperm associated auxiliary subunit delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:4,736,106...4,792,440
Ensembl chr19:5,671,403...5,722,095 		JBrowse link
G CATSPERE catsper channel auxiliary subunit epsilon involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:220,072,548...220,233,904
Ensembl chr 1:225,454,034...225,613,797 		JBrowse link
G CATSPERZ catsper channel auxiliary subunit zeta involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr11:59,657,237...59,661,838
Ensembl chr11:63,001,836...63,006,546 		JBrowse link
G CFTR CF transmembrane conductance regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:109,449,847...109,633,023
Ensembl chr 7:122,129,798...122,327,864 		JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15888450) Ensembl
MGI		 PMID:15888450 GO_REF:0000107 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629 		JBrowse link
G EFCAB9 EF-hand calcium binding domain 9 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:167,545,205...167,554,563
Ensembl chr 5:174,461,056...174,470,489 		JBrowse link
G ELSPBP1 epididymal sperm binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:44,950,665...44,964,314
Ensembl chr19:53,601,043...53,614,713 		JBrowse link
G LOC100988353 septin-4 acts_upstream_of_or_within ISO (PMID:15737931) MGI PMID:15737931 NCBI chr17:52,595,185...52,607,020
Ensembl chr17:57,448,904...57,472,690 		JBrowse link
G LOC100994888 solute carrier family 22 member 13 acts_upstream_of_or_within ISO (PMID:27811987) MGI PMID:27811987 NCBI chr 3:38,179,107...38,216,934
Ensembl chr 3:38,486,595...38,498,833 		JBrowse link
G PCSK4 proprotein convertase subtilisin/kexin type 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16371590) Ensembl
MGI		 PMID:16371590 GO_REF:0000107 Ensembl chr19:1,452,924...1,466,438 JBrowse link
G PEBP1 phosphatidylethanolamine binding protein 1 acts_upstream_of_or_within ISO (PMID:16183867) MGI PMID:16183867 NCBI chr12:115,716,953...115,726,412
Ensembl chr12:119,093,952...119,105,054 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:13,657,344...13,683,864
Ensembl chr19:14,385,191...14,406,205 		JBrowse link
G ROPN1 rhophilin associated tail protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23303679) TreeGrafter
MGI		 PMID:23303679 GO_REF:0000118 NCBI chr 3:121,074,182...121,097,320
Ensembl chr 3:127,973,536...127,996,694 		JBrowse link
G ROPN1L rhophilin associated tail protein 1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23303679) Ensembl
MGI		 PMID:23303679 GO_REF:0000107 NCBI chr 5:10,757,032...10,795,787
Ensembl chr 5:10,614,565...10,635,705 		JBrowse link
G SEMG1 semenogelin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:41,537,773...41,539,964
Ensembl chr20:42,628,856...42,631,405 		JBrowse link
G SEMG2 semenogelin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17123940) TreeGrafter
MGI		 PMID:17123940 GO_REF:0000118 NCBI chr20:41,552,614...41,554,605
Ensembl chr20:42,642,620...42,644,611 		JBrowse link
G SLC26A3 solute carrier family 26 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:99,747,405...99,776,763
Ensembl chr 7:112,470,041...112,507,671 		JBrowse link
G SLC26A6 solute carrier family 26 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:48,547,277...48,557,099
Ensembl chr 3:49,629,237...49,639,039 		JBrowse link
G SPINK1 serine peptidase inhibitor Kazal type 1 acts_upstream_of_or_within ISO (PMID:22228629) MGI PMID:22228629 NCBI chr 5:143,273,137...143,287,745 JBrowse link
G STRC stereocilin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:22,562,313...22,633,064
Ensembl chr15:40,769,539...40,795,723
Ensembl chr15:40,769,539...40,795,723 		JBrowse link
sperm DNA condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRDT bromodomain testis associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:94,603,937...94,668,852
Ensembl chr 1:93,348,994...93,413,343 		JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 involved_in ISO (MGI:5559810|PMID:24252660) UniProt PMID:24252660 MGI:5559810 NCBI chr 1:4,867,636...4,947,401
Ensembl chr 1:6,125,525...6,191,991 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,398,557...32,509,146
Ensembl chr10:32,985,456...33,095,070 		JBrowse link
G FSHR follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10775161), (PMID:14680821) Ensembl
MGI		 PMID:10775161 PMID:14680821 GO_REF:0000107 NCBI chr2A:49,088,450...49,287,688
Ensembl chr2A:50,008,328...50,207,258 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G LOC100979289 histone H2B type 1-A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:25,561,518...25,562,817
Ensembl chr 6:25,887,397...25,887,780 		JBrowse link
G LOC117975443 testis-specific H1 histone involved_in ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr12:40,244,979...40,262,470
Ensembl chr12:41,281,177...41,281,944
Ensembl chr12:41,281,177...41,281,944 		JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:127,951,178...127,986,173
Ensembl chr12:132,169,820...132,199,374 		JBrowse link
G PRM1 protamine 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:10,222,779...10,223,289 JBrowse link
G PSME4 proteasome activator subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:54,007,224...54,113,557
Ensembl chr2A:54,919,094...55,024,551 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949 		JBrowse link
G SELENOF selenoprotein F ISO RGD PMID:11344099 RGD:728803 NCBI chr 1:119,382,707...119,432,277
Ensembl chr 1:88,234,383...88,282,944 		JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22164254) Ensembl
MGI		 PMID:22164254 GO_REF:0000107 NCBI chr 1:87,565,888...87,701,530
Ensembl chr 1:122,614,520...122,754,137 		JBrowse link
G SYCP3 synaptonemal complex protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22164254) Ensembl
MGI		 PMID:22164254 GO_REF:0000107 NCBI chr12:99,311,260...99,322,007
Ensembl chr12:102,711,837...102,720,728 		JBrowse link
G TNP1 transition protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212 		JBrowse link
G TNP2 transition protein 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:10,209,801...10,211,466
Ensembl chr16:11,431,822...11,433,087 		JBrowse link
G TSSK6 testis specific serine kinase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,952,643...18,954,101
Ensembl chr19:19,950,614...19,951,435 		JBrowse link
sperm flagellum assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP4 A-kinase anchoring protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385410) Ensembl
MGI		 PMID:15385410 GO_REF:0000107 NCBI chr  X:42,396,399...42,406,725
Ensembl chr  X:50,109,367...50,119,658 		JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:38038747) Ensembl
MGI		 PMID:38038747 GO_REF:0000107 NCBI chr 7:68,965,404...69,215,833
Ensembl chr 7:82,900,402...83,027,578 		JBrowse link
G CCDC38 coiled-coil domain containing 38 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:35587122) Ensembl
MGI		 PMID:35587122 GO_REF:0000107 NCBI chr12:93,459,847...93,534,527
Ensembl chr12:96,849,800...96,903,044 		JBrowse link
G CEP128 centrosomal protein 128 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:35296684) Ensembl
MGI		 PMID:35296684 GO_REF:0000107 NCBI chr14:61,057,348...61,505,022
Ensembl chr14:80,257,872...80,679,447 		JBrowse link
G CFAP221 cilia and flagella associated protein 221 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18039845)
(PMID:32704025)		 Ensembl
MGI		 PMID:18039845 PMID:32704025 GO_REF:0000107 NCBI chr2B:6,478,324...6,594,636
Ensembl chr2B:120,056,182...120,168,050 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 involved_in ISO (MGI:6721190|PMID:34124066) UniProt PMID:34124066 MGI:6721190 NCBI chr18:43,597,731...43,647,238
Ensembl chr18:46,955,364...46,994,771 		JBrowse link
G CFAP54 cilia and flagella associated protein 54 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32704025) Ensembl
MGI		 PMID:32704025 GO_REF:0000107 NCBI chr12:94,069,654...94,466,858
Ensembl chr12:97,488,849...97,868,869 		JBrowse link
G CFAP57 cilia and flagella associated protein 57 acts_upstream_of_or_within ISO (PMID:36752199) MGI PMID:36752199 NCBI chr 1:42,470,987...42,556,101
Ensembl chr 1:43,848,369...43,933,279 		JBrowse link
G CFAP58 cilia and flagella associated protein 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:100,905,434...101,056,560
Ensembl chr10:104,412,171...104,514,920 		JBrowse link
G CFAP61 cilia and flagella associated protein 61 involved_in
acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:35174165)
(PMID:34792097)
(PMID:36659204)
(PMID:35387802)		 UniProt
MGI		 PMID:34792097 PMID:35174165 PMID:35387802 PMID:36659204 NCBI chr20:20,010,524...20,309,835 JBrowse link
G CFAP70 cilia and flagella associated protein 70 acts_upstream_of_or_within ISO (PMID:37352829) MGI PMID:37352829 NCBI chr10:69,801,407...69,906,688
Ensembl chr10:72,260,229...72,360,714 		JBrowse link
G DNALI1 dynein axonemal light intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,829,963...36,839,898
Ensembl chr 1:38,179,381...38,189,378 		JBrowse link
G DNHD1 dynein heavy chain domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,628,568...6,703,994
Ensembl chr11:6,312,254...6,386,993 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:34169321) MGI PMID:34169321 NCBI chr2A:26,399,275...26,453,518
Ensembl chr2A:26,491,900...26,545,640 		JBrowse link
G DZIP1 DAZ interacting zinc finger protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:76,757,062...76,820,627
Ensembl chr13:95,913,144...95,972,799 		JBrowse link
G IFT81 intraflagellar transport 81 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:107,659,663...107,794,066
Ensembl chr12:111,096,722...111,186,217 		JBrowse link
G PDCL2 phosducin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:36278277) Ensembl
MGI		 PMID:36278277 GO_REF:0000107 NCBI chr 4:68,343,615...68,381,364
Ensembl chr 4:74,907,904...74,944,895 		JBrowse link
G PFN4 profilin family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:24,110,565...24,120,024
Ensembl chr2A:24,209,163...24,217,262 		JBrowse link
G POC1B POC1 centriolar protein B acts_upstream_of_or_within ISO (PMID:30298696) MGI PMID:30298696 NCBI chr12:86,946,987...87,053,789
Ensembl chr12:90,267,217...90,373,682 		JBrowse link
G RSPH6A radial spoke head 6 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,805,151...42,824,725
Ensembl chr19:51,342,729...51,361,239 		JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:32704025) MGI PMID:32704025 NCBI chr 5:74,554,017...74,751,921
Ensembl chr 5:79,834,733...80,031,599 		JBrowse link
G YIF1B Yip1 interacting factor homolog B, membrane trafficking protein involved_in ISO (MGI:6718237|PMID:33103737) UniProt PMID:33103737 MGI:6718237 NCBI chr19:35,396,685...35,407,665
Ensembl chr19:43,970,703...43,981,310 		JBrowse link
sperm individualization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPEM1 spermatid maturation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17426145) Ensembl
MGI
TreeGrafter		 PMID:17426145 GO_REF:0000107 GO_REF:0000118 NCBI chr17:7,454,453...7,455,791
Ensembl chr17:7,441,032...7,442,342 		JBrowse link
G SPEM3 SPEM family member 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:7,462,304...7,466,931
Ensembl chr17:7,449,092...7,453,041 		JBrowse link
sperm mitochondrial sheath assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC12 armadillo repeat containing 12 involved_in ISO (MGI:6507113|PMID:33536340) UniProt PMID:33536340 MGI:6507113 NCBI chr 6:35,299,170...35,311,231
Ensembl chr 6:36,500,828...36,512,824 		JBrowse link
G CFAP58 cilia and flagella associated protein 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:100,905,434...101,056,560
Ensembl chr10:104,412,171...104,514,920 		JBrowse link
G GK2 glycerol kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:44,780,488...44,784,433
Ensembl chr 4:50,628,938...50,630,599 		JBrowse link
G KLC3 kinesin light chain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,293,515...42,300,592
Ensembl chr19:50,887,900...50,898,689 		JBrowse link
G LOC112441159 uncharacterized LOC112441159 involved_in ISO (MGI:7255948|PMID:35228556) UniProt PMID:35228556 MGI:7255948 NCBI chr11:18,626,514...18,634,370 JBrowse link
G TBC1D21 TBC1 domain family member 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:52,783,013...52,798,656
Ensembl chr15:71,538,363...71,553,960 		JBrowse link
G VDAC3 voltage dependent anion channel 3 involved_in ISO (MGI:7255948|PMID:35228556) UniProt PMID:35228556 MGI:7255948 NCBI chr 8:41,638,522...41,652,637
Ensembl chr 8:39,082,698...39,097,437 		JBrowse link
spermatid nucleus differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGFG1 ArfGAP with FG repeats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16765935) TreeGrafter
MGI		 PMID:16765935 GO_REF:0000118 NCBI chr2B:114,711,697...114,800,680
Ensembl chr2B:233,542,185...233,604,897 		JBrowse link
G AGFG2 ArfGAP with FG repeats 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:92,566,281...92,595,374
Ensembl chr 7:105,967,731...105,997,467 		JBrowse link
G GOPC golgi associated PDZ and coiled-coil motif containing acts_upstream_of_or_within ISO (PMID:16765935) MGI PMID:16765935 NCBI chr 6:115,368,682...115,411,140
Ensembl chr 6:119,509,936...119,552,010 		JBrowse link
G HMGB2 high mobility group box 2 acts_upstream_of_or_within ISO (PMID:16765935) MGI PMID:16765935 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952 		JBrowse link
G MFSD14A major facilitator superfamily domain containing 14A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27107036) Ensembl
MGI		 PMID:27107036 GO_REF:0000107 NCBI chr 1:102,696,558...102,741,630 JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10733589) Ensembl
MGI		 PMID:10733589 GO_REF:0000107 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024 		JBrowse link
G PYGO1 pygopus family PHD finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637336) Ensembl
MGI
TreeGrafter		 PMID:23637336 GO_REF:0000107 GO_REF:0000118 NCBI chr15:34,509,787...34,556,686
Ensembl chr15:52,838,651...52,879,630 		JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637336) Ensembl
MGI
TreeGrafter		 PMID:23637336 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:130,305,547...130,310,270
Ensembl chr 1:133,912,411...133,920,308 		JBrowse link
G SLC35A3 solute carrier family 35 member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,625,605...102,701,687 JBrowse link
G TBPL1 TATA-box binding protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16765935) Ensembl
MGI		 PMID:16765935 GO_REF:0000107 NCBI chr 6:131,719,606...131,754,960
Ensembl chr 6:135,817,613...135,852,876 		JBrowse link
G TMF1 TATA element modulatory factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20691678) Ensembl
MGI		 PMID:20691678 GO_REF:0000107 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460 		JBrowse link
spermatid nucleus elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP61 cilia and flagella associated protein 61 acts_upstream_of_or_within ISO (PMID:36659204) MGI PMID:36659204 NCBI chr20:20,010,524...20,309,835 JBrowse link
G DMRTC2 DMRT like family C2 acts_upstream_of_or_within ISO (PMID:17098235) MGI PMID:17098235 NCBI chr19:38,735,791...38,741,017 JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:21337470) MGI PMID:21337470 NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204 		JBrowse link
G KDM3A lysine demethylase 3A acts_upstream_of_or_within ISO (PMID:17943087) MGI PMID:17943087 NCBI chr2A:86,497,531...86,548,772 JBrowse link
G LOC117975443 testis-specific H1 histone involved_in ISO (MGI:3531623|PMID:15710904) UniProt PMID:15710904 MGI:3531623 NCBI chr12:40,244,979...40,262,470
Ensembl chr12:41,281,177...41,281,944
Ensembl chr12:41,281,177...41,281,944 		JBrowse link
G TNP1 transition protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    reproductive process 1690
      developmental process involved in reproduction 1126
        spermatid differentiation 266
          spermatid development 256
            Nebenkern assembly 0
            acrosome assembly + 39
            intramanchette transport 2
            manchette assembly 9
            manchette disassembly 1
            sperm capacitation + 35
            sperm flagellum assembly + 59
            sperm individualization 2
            spermatid nucleus differentiation + 32
Path 2
Term Annotations click to browse term
  biological_process 16313
    reproductive process 1690
      multicellular organismal reproductive process 1076
        gamete generation 836
          male gamete generation 653
            spermatogenesis 630
              spermatid differentiation 266
                spermatid development 256
                  Nebenkern assembly 0
                  acrosome assembly + 39
                  intramanchette transport 2
                  manchette assembly 9
                  manchette disassembly 1
                  sperm capacitation + 35
                  sperm flagellum assembly + 59
                  sperm individualization 2
                  spermatid nucleus differentiation + 32
paths to the root