Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:transmembrane receptor protein serine/threonine kinase signaling pathway
go back to main search page
Accession:GO:0007178 term browser browse the term
Definition:The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses serine/threonine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: transmembrane receptor protein serine/threonine kinase signalling pathway


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
transmembrane receptor protein serine/threonine kinase signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Acvr1b activin A receptor type 1B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:9,407,578...9,449,611
Ensembl chrNW_004936512:9,407,581...9,449,632
JBrowse link
G Acvr1c activin A receptor type 1C involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936469:20,892,715...20,964,674
Ensembl chrNW_004936469:20,892,466...20,960,098
JBrowse link
G Acvr2a activin A receptor type 2A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Acvr2b activin A receptor type 2B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:27,816,366...27,822,555
Ensembl chrNW_004936473:27,815,399...27,822,476
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Akap3 A-kinase anchoring protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335900|PMID:10319321) MGI
Ensembl
PMID:10319321 GO_REF:0000107 MGI:1335900 NCBI chrNW_004936606:4,771,158...4,794,666
Ensembl chrNW_004936606:4,771,180...4,794,902
JBrowse link
G Akap4 A-kinase anchoring protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1328474|PMID:9852104) MGI
Ensembl
PMID:9852104 GO_REF:0000107 MGI:1328474 NCBI chrNW_004936721:1,692,623...1,700,256
Ensembl chrNW_004936721:1,692,623...1,702,348
JBrowse link
G Amhr2 anti-Mullerian hormone receptor type 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:10,706,043...10,712,797
Ensembl chrNW_004936512:10,705,350...10,713,517
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3819026|PMID:18363966) Ensembl
MGI
InterPro
PMID:18363966 GO_REF:0000002 GO_REF:0000107 MGI:3819026 NCBI chrNW_004936687:2,346,601...2,595,283
Ensembl chrNW_004936687:2,503,777...2,597,522
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Ecsit ECSIT signaling integrator acts_upstream_of_or_within ISO (MGI:1344119|PMID:10465784) MGI PMID:10465784 MGI:1344119 NCBI chrNW_004936659:1,550,192...1,563,534
Ensembl chrNW_004936659:1,549,581...1,563,574
JBrowse link
G Gdf5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3819026|PMID:18363966) Ensembl
MGI
PMID:18363966 GO_REF:0000107 MGI:3819026 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G LOC101977693 lymphocyte antigen 6G6e-like involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936727:1,819,792...1,821,533 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3819026|PMID:18363966) Ensembl
MGI
PMID:18363966 GO_REF:0000107 MGI:3819026 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Palm2akap2 PALM2 and AKAP2 fusion acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1201304|PMID:9497389) MGI
Ensembl
PMID:9497389 GO_REF:0000107 MGI:1201304 NCBI chrNW_004936559:2,860,595...3,194,846
Ensembl chrNW_004936559:2,860,147...2,997,627
JBrowse link
G Ppm1l protein phosphatase, Mg2+/Mn2+ dependent 1L acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2670330|PMID:12823230) MGI
Ensembl
PMID:12823230 GO_REF:0000107 MGI:2670330 NCBI chrNW_004936708:724,878...1,006,405
Ensembl chrNW_004936708:727,610...996,607
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Trps1 transcriptional repressor GATA binding 1 acts_upstream_of_or_within ISO (MGI:3819026|PMID:18363966) MGI PMID:18363966 MGI:3819026 NCBI chrNW_004936470:30,475,779...30,666,546
Ensembl chrNW_004936470:30,432,625...30,665,091
JBrowse link
activin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Acvr1b activin A receptor type 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3619747|PMID:16115198) MGI
Ensembl
PMID:16115198 GO_REF:0000107 MGI:3619747 NCBI chrNW_004936512:9,407,578...9,449,611
Ensembl chrNW_004936512:9,407,581...9,449,632
JBrowse link
G Acvr2a activin A receptor type 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Acvr2b activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,816,366...27,822,555
Ensembl chrNW_004936473:27,815,399...27,822,476
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of
involved_in
ISO
IEA
(MGI:5444317|PMID:23034635) MGI
Ensembl
PMID:23034635 GO_REF:0000107 MGI:5444317 NCBI chrNW_004936720:282,291...316,629
Ensembl chrNW_004936720:279,521...316,674
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gdf6 growth differentiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:46,361,528...46,379,576
Ensembl chrNW_004936470:46,361,451...46,377,594
JBrowse link
G Gdf7 growth differentiation factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761
JBrowse link
G Hjv hemojuvelin BMP co-receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936867:742,539...747,035
Ensembl chrNW_004936867:742,501...746,930
JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:9884026) BHF-UCL PMID:9884026 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Inhbb inhibin subunit beta B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:50,186,036...50,191,455
Ensembl chrNW_004936469:50,186,036...50,191,461
JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of
involved_in
ISO
IEA
(MGI:5449665|PMID:22729085) MGI
Ensembl
PMID:22729085 GO_REF:0000107 MGI:5449665 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Acvr2a activin A receptor type 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718174|PMID:17472960)
(PMID:17472960)
MGI
Ensembl
PMID:17472960 GO_REF:0000107 MGI:3718174 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Acvr2b activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,816,366...27,822,555
Ensembl chrNW_004936473:27,815,399...27,822,476
JBrowse link
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432418|PMID:22783020) MGI
Ensembl
PMID:22783020 GO_REF:0000107 MGI:5432418 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
G Bmp10 bone morphogenetic protein 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16049014) MGI
Ensembl
PMID:16049014 GO_REF:0000107 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:17472960)
(MGI:2681048|PMID:14623234), (MGI:3837587|PMID:19208758), (MGI:4397715|PMID:19852960), (MGI:4455113|PMID:20065295), (MGI:5613417|PMID:25100727)
(MGI:3590430|PMID:15975920)
RGD
Ensembl
MGI
PMID:12398941 PMID:14623234 PMID:15975920 PMID:17472960 PMID:19208758 More... GO_REF:0000107 MGI:2681048 MGI:3590430 MGI:3837587 MGI:4397715 MGI:4455113 MGI:5613417 RGD:631753 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681048|PMID:14623234), (MGI:3718174|PMID:17472960)
(PMID:17472960)
(MGI:3590430|PMID:15975920)
MGI
Ensembl
PMID:14623234 PMID:15975920 PMID:17472960 GO_REF:0000107 MGI:2681048 MGI:3590430 MGI:3718174 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp6 bone morphogenetic protein 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681048|PMID:14623234), (MGI:4397715|PMID:19852960) MGI
Ensembl
PMID:14623234 PMID:19852960 GO_REF:0000107 MGI:2681048 MGI:4397715 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681048|PMID:14623234) MGI
Ensembl
PMID:14623234 GO_REF:0000107 MGI:2681048 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bmper BMP binding endothelial regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:9,705,634...9,941,382
Ensembl chrNW_004936478:9,705,604...9,941,340
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3702797|PMID:16943278)
(MGI:1096027|PMID:9268344)
(MGI:3722226|PMID:17699604)
(MGI:3625588|PMID:16604073)
(MGI:3604030|PMID:16049014)
MGI
Ensembl
PMID:9268344 PMID:16049014 PMID:16604073 PMID:16943278 PMID:17699604 GO_REF:0000107 MGI:1096027 MGI:3604030 MGI:3625588 MGI:3702797 MGI:3722226 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1935017|PMID:11376112)
(MGI:3625588|PMID:16604073)
(MGI:3604030|PMID:16049014)
MGI
Ensembl
PMID:11376112 PMID:16049014 PMID:16604073 GO_REF:0000107 MGI:1935017 MGI:3604030 MGI:3625588 NCBI chrNW_004936687:2,346,601...2,595,283
Ensembl chrNW_004936687:2,503,777...2,597,522
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718174|PMID:17472960) MGI
Ensembl
PMID:17472960 GO_REF:0000107 MGI:3718174 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Chrd chordin involved_in ISO (MGI:3717982|PMID:17634368)
(MGI:2389288|PMID:12397106)
MGI PMID:12397106 PMID:17634368 MGI:2389288 MGI:3717982 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
G Chrdl1 chordin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936499:4,474,899...4,587,563
Ensembl chrNW_004936499:4,474,884...4,587,501
JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5318950|PMID:21350216) MGI
Ensembl
PMID:21350216 GO_REF:0000107 MGI:5318950 NCBI chrNW_004936596:2,544,389...2,551,155
Ensembl chrNW_004936596:2,544,389...2,551,164
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:5,005,211...5,013,439
Ensembl chrNW_004936541:5,004,692...5,013,350
JBrowse link
G Dlx3 distal-less homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,625,862...11,630,035
Ensembl chrNW_004936490:11,625,862...11,631,131
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:3,462,063...3,466,641
Ensembl chrNW_004936585:3,461,944...3,466,641
JBrowse link
G Dsg4 desmoglein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3820455|PMID:18692037) MGI
Ensembl
PMID:18692037 GO_REF:0000107 MGI:3820455 NCBI chrNW_004936682:1,803,862...1,829,352
Ensembl chrNW_004936682:1,803,862...1,841,396
JBrowse link
G Ecsit ECSIT signaling integrator acts_upstream_of_or_within ISO (MGI:2682456|PMID:14633973) MGI PMID:14633973 MGI:2682456 NCBI chrNW_004936659:1,550,192...1,563,534
Ensembl chrNW_004936659:1,549,581...1,563,574
JBrowse link
G Egr1 early growth response 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:80924|PMID:8769660) MGI
Ensembl
PMID:8769660 GO_REF:0000107 MGI:80924 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6406761|PMID:22556407)
(MGI:5487694|PMID:23458899), (MGI:5907385|PMID:28445472), (MGI:6406761|PMID:22556407), (MGI:6406770|PMID:21148566)
MGI
Ensembl
PMID:21148566 PMID:22556407 PMID:23458899 PMID:28445472 GO_REF:0000107 MGI:5487694 MGI:5907385 MGI:6406761 MGI:6406770 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
G Fam83g family with sequence similarity 83 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936881:623,048...651,065
Ensembl chrNW_004936881:622,966...653,421
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716) MGI
Ensembl
PMID:18590716 GO_REF:0000107 MGI:3806189 NCBI chrNW_004936596:2,728,089...2,735,718
Ensembl chrNW_004936596:2,728,114...2,735,317
JBrowse link
G Fst follistatin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513220|PMID:15525533) MGI
Ensembl
PMID:15525533 GO_REF:0000107 MGI:3513220 NCBI chrNW_004936480:13,990,967...13,997,248
Ensembl chrNW_004936480:13,990,929...13,997,248
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gdf6 growth differentiation factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3604030|PMID:16049014) MGI
Ensembl
PMID:16049014 GO_REF:0000107 MGI:3604030 NCBI chrNW_004936470:46,361,528...46,379,576
Ensembl chrNW_004936470:46,361,451...46,377,594
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3604030|PMID:16049014) MGI
Ensembl
PMID:16049014 GO_REF:0000107 MGI:3604030 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:3807421|PMID:18579678) MGI
Ensembl
PMID:18579678 GO_REF:0000107 MGI:3807421 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of
involved_in
ISO
IEA
(MGI:3807421|PMID:18579678) MGI
Ensembl
PMID:18579678 GO_REF:0000107 MGI:3807421 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950
JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580
JBrowse link
G Hivep1 HIVEP zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:1,002,801...1,133,522
Ensembl chrNW_004936534:1,002,719...1,133,544
JBrowse link
G Hjv hemojuvelin BMP co-receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3625588|PMID:16604073), (MGI:5578296|PMID:24409331)
(MGI:5314735|PMID:19751239)
MGI
Ensembl
PMID:16604073 PMID:19751239 PMID:24409331 GO_REF:0000107 MGI:3625588 MGI:5314735 MGI:5578296 NCBI chrNW_004936867:742,539...747,035
Ensembl chrNW_004936867:742,501...746,930
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (MGI:3575204|PMID:15820682) MGI PMID:15820682 MGI:3575204 NCBI chrNW_004936485:18,610,721...18,611,889
Ensembl chrNW_004936485:18,610,665...18,612,059
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1306711|PMID:9769173) MGI
Ensembl
PMID:9769173 GO_REF:0000107 MGI:1306711 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G LOC101965998 notch receptor 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:5492288|PMID:23676271) MGI
Ensembl
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Megf8 multiple EGF like domains 8 involved_in IEA
ISS
Ensembl
CAFA
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936706:157,167...198,071
Ensembl chrNW_004936706:157,019...197,500
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716)
(MGI:3810851|PMID:18667074)
(MGI:3720542|PMID:17601530)
MGI
Ensembl
PMID:17601530 PMID:18590716 PMID:18667074 GO_REF:0000107 MGI:3720542 MGI:3806189 MGI:3810851 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716)
(MGI:3810851|PMID:18667074)
(MGI:3720542|PMID:17601530)
MGI
Ensembl
PMID:17601530 PMID:18590716 PMID:18667074 GO_REF:0000107 MGI:3720542 MGI:3806189 MGI:3810851 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Nanog Nanog homeobox acts_upstream_of
involved_in
ISO
IEA
(MGI:3654744|PMID:16801560) MGI
Ensembl
PMID:16801560 GO_REF:0000107 MGI:3654744 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Nfia nuclear factor I A involved_in ISO (MGI:6110918|PMID:29247144) MGI PMID:29247144 MGI:6110918 NCBI chrNW_004936522:612,357...1,171,079
Ensembl chrNW_004936522:615,012...957,282
JBrowse link
G Nog noggin involved_in
acts_upstream_of
IEA
ISO
(MGI:4415813|PMID:18462699) Ensembl
MGI
PMID:18462699 GO_REF:0000107 MGI:4415813 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Pdcd4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,684,167...1,705,387
Ensembl chrNW_004936486:1,684,135...1,705,715
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:18382765) BHF-UCL PMID:18382765 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3590430|PMID:15975920) MGI
Ensembl
PMID:15975920 GO_REF:0000107 MGI:3590430 NCBI chrNW_004936483:9,753,112...9,792,817
Ensembl chrNW_004936483:9,766,275...9,793,001
JBrowse link
G Rgmb repulsive guidance molecule BMP co-receptor b acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3579753|PMID:15671031) MGI
Ensembl
PMID:15671031 GO_REF:0000107 MGI:3579753 NCBI chrNW_004936523:5,050,765...5,078,777
Ensembl chrNW_004936523:5,050,377...5,078,866
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chrNW_004936796:630,307...675,157
Ensembl chrNW_004936796:630,756...674,279
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4418577|PMID:20059955) UniProt PMID:20059955 MGI:4418577 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Slc33a1 solute carrier family 33 member 1 involved_in ISO (PMID:25402622) UniProt PMID:25402622 NCBI chrNW_004936519:3,038,895...3,061,215
Ensembl chrNW_004936519:3,036,106...3,061,271
JBrowse link
G Slc39a5 solute carrier family 39 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:638,956...649,501
Ensembl chrNW_004936646:640,253...645,617
JBrowse link
G Smad1 SMAD family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3625588|PMID:16604073)
(MGI:3840027|PMID:19224984)
(MGI:3044557|PMID:15198985)
(MGI:5613417|PMID:25100727)
RGD
MGI
Ensembl
PMID:15198985 PMID:16020542 PMID:16604073 PMID:19224984 PMID:25100727 GO_REF:0000107 MGI:3044557 MGI:3625588 MGI:3840027 MGI:5613417 RGD:1643232 NCBI chrNW_004936535:3,582,512...3,626,312
Ensembl chrNW_004936535:3,582,489...3,657,063
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716)
(MGI:3840027|PMID:19224984)
MGI
Ensembl
PMID:18590716 PMID:19224984 GO_REF:0000107 MGI:3806189 MGI:3840027 NCBI chrNW_004936597:3,225,374...3,264,604
Ensembl chrNW_004936597:3,225,374...3,264,604
JBrowse link
G Smad6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571
JBrowse link
G Smad9 SMAD family member 9 involved_in
acts_upstream_of_or_within
ISO (MGI:4352622|PMID:19252488)
(MGI:3840027|PMID:19224984)
(MGI:3806189|PMID:18590716)
BHF-UCL
MGI
PMID:18590716 PMID:19224984 PMID:19252488 MGI:3806189 MGI:3840027 MGI:4352622 NCBI chrNW_004936472:30,980,850...31,050,138
Ensembl chrNW_004936472:30,980,928...31,049,618
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5582670|PMID:24505141) MGI
Ensembl
PMID:24505141 GO_REF:0000107 MGI:5582670 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323
JBrowse link
G Sost sclerostin acts_upstream_of
involved_in
ISO
IEA
(MGI:3766170|PMID:17002572) MGI
Ensembl
PMID:17002572 GO_REF:0000107 MGI:3766170 NCBI chrNW_004936541:313,308...318,109
Ensembl chrNW_004936541:313,287...318,176
JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:3603904|PMID:16179481) MGI
Ensembl
PMID:16179481 GO_REF:0000107 MGI:3603904 NCBI chrNW_004936546:2,976,045...2,980,487
Ensembl chrNW_004936546:2,975,606...2,980,514
JBrowse link
G Spart spartin acts_upstream_of
involved_in
ISO
IEA
(MGI:5430704|PMID:22619377) MGI
Ensembl
PMID:22619377 GO_REF:0000107 MGI:5430704 NCBI chrNW_004936472:30,467,975...30,525,880
Ensembl chrNW_004936472:30,467,964...30,504,624
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of ISO (MGI:3763872|PMID:17919533) MGI PMID:17919533 MGI:3763872 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in
acts_upstream_of
IEA
ISO
(MGI:5617089|PMID:25382630) Ensembl
MGI
PMID:25382630 GO_REF:0000107 MGI:5617089 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Tmem100 transmembrane protein 100 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,958,064...6,963,888
Ensembl chrNW_004936490:6,958,096...6,964,536
JBrowse link
G Tmprss6 transmembrane serine protease 6 acts_upstream_of
involved_in
ISO
IEA
(MGI:5314735|PMID:19751239) MGI
Ensembl
PMID:19751239 GO_REF:0000107 MGI:5314735 NCBI chrNW_004936492:3,819,347...3,848,372
Ensembl chrNW_004936492:3,819,309...3,848,075
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3043486|PMID:14681194) MGI
Ensembl
PMID:14681194 GO_REF:0000107 MGI:3043486 NCBI chrNW_004936626:1,901,686...1,946,554
Ensembl chrNW_004936626:1,901,680...1,946,460
JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:978,318...1,094,729
Ensembl chrNW_004936545:978,280...1,095,659
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,649,808...7,732,731
Ensembl chrNW_004936502:7,649,842...7,735,382
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of
involved_in
ISO
IEA
(MGI:3777488|PMID:18351662) MGI
Ensembl
PMID:18351662 GO_REF:0000107 MGI:3777488 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Zcchc12 zinc finger CCHC-type containing 12 acts_upstream_of_or_within ISO (MGI:4357758|PMID:19416967) MGI PMID:19416967 MGI:4357758 NCBI chrNW_004936479:11,021,502...11,024,612 JBrowse link
G Znf8 zinc finger protein 8 acts_upstream_of_or_within ISO (MGI:2388376|PMID:12370310) MGI PMID:12370310 MGI:2388376 NCBI chrNW_004937350:30,531...48,347 JBrowse link
BMP signaling pathway involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Chrd chordin involved_in ISO (MGI:3721005|PMID:17685487) MGI PMID:17685487 MGI:3721005 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3810851|PMID:18667074) MGI
Ensembl
PMID:18667074 GO_REF:0000107 MGI:3810851 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3810851|PMID:18667074) MGI
Ensembl
PMID:18667074 GO_REF:0000107 MGI:3810851 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
BMP signaling pathway involved in heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chrNW_004936837:827,568...838,933 JBrowse link
BMP signaling pathway involved in mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (MGI:4415813|PMID:18462699) MGI PMID:18462699 MGI:4415813 NCBI chrNW_004936570:671,152...673,768 JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
BMP signaling pathway involved in renal system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
BMP signaling pathway involved in spinal cord dorsal/ventral patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
BMP signaling pathway involved in ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
common-partner SMAD protein phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmper BMP binding endothelial regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:9,705,634...9,941,382
Ensembl chrNW_004936478:9,705,604...9,941,340
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054278|PMID:15356634) MGI
Ensembl
PMID:15356634 GO_REF:0000107 MGI:3054278 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16806156) MGI
Ensembl
PMID:16806156 GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2449899|PMID:12543979) MGI
Ensembl
PMID:12543979 GO_REF:0000107 MGI:2449899 NCBI chrNW_004936491:920,830...1,108,374
Ensembl chrNW_004936491:956,986...1,108,640
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:14729511 RGD:1579921 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
negative regulation of activin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:9660951)
(MGI:1858315|PMID:10748465)
BHF-UCL PMID:9660951 PMID:10748465 MGI:1858315 NCBI chrNW_004936539:8,321,432...8,323,909 JBrowse link
G Fst follistatin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:13,990,967...13,997,248
Ensembl chrNW_004936480:13,990,929...13,997,248
JBrowse link
G Fstl3 follistatin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:250,359...255,922
Ensembl chrNW_004936588:250,249...256,902
JBrowse link
G Igsf1 immunoglobulin superfamily member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:402,957...418,400
Ensembl chrNW_004936479:402,957...418,400
JBrowse link
G Lemd3 LEM domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,385,821...3,453,861
Ensembl chrNW_004936545:3,385,062...3,454,243
JBrowse link
G LOC101967553 synaptojanin-2-binding protein involved_in ISO (MGI:3623710|PMID:16648306) UniProt PMID:16648306 MGI:3623710 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:1353670|PMID:10681527) UniProt PMID:10681527 MGI:1353670 NCBI chrNW_004936479:21,373,917...22,062,498
Ensembl chrNW_004936479:21,373,746...21,920,214
JBrowse link
G Ski SKI proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631
JBrowse link
negative regulation of BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5449665|PMID:22729085) MGI
Ensembl
PMID:22729085 GO_REF:0000107 MGI:5449665 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Bambi BMP and activin membrane bound inhibitor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21743293) ARUK-UCL
Ensembl
PMID:21743293 GO_REF:0000107 NCBI chrNW_004936613:3,098,549...3,103,868
Ensembl chrNW_004936613:3,098,159...3,103,868
JBrowse link
G Bmper BMP binding endothelial regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2670247|PMID:12897139) MGI
Ensembl
PMID:12897139 GO_REF:0000107 MGI:2670247 NCBI chrNW_004936478:9,705,634...9,941,382
Ensembl chrNW_004936478:9,705,604...9,941,340
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:15657086) BHF-UCL PMID:15657086 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:1101446|PMID:9431803), (MGI:1197794|PMID:9501024) MGI PMID:9431803 PMID:9501024 MGI:1101446 MGI:1197794 NCBI chrNW_004936539:8,321,432...8,323,909 JBrowse link
G Chrd chordin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577114|PMID:15780974), (MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:15780974 PMID:19850029 GO_REF:0000107 MGI:3577114 MGI:4429763 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198
JBrowse link
G Chrdl1 chordin like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5492288|PMID:23676271) MGI
Ensembl
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chrNW_004936499:4,474,899...4,587,563
Ensembl chrNW_004936499:4,474,884...4,587,501
JBrowse link
G Chrdl2 chordin like 2 acts_upstream_of_or_within ISO (MGI:2683044|PMID:14660436) MGI PMID:14660436 MGI:2683044 NCBI chrNW_004936498:3,637,476...3,667,922
Ensembl chrNW_004936498:3,637,439...3,667,599
JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21743293) ARUK-UCL
Ensembl
PMID:21743293 GO_REF:0000107 NCBI chrNW_004936663:1,623,655...1,803,442
Ensembl chrNW_004936663:1,623,355...1,803,448
JBrowse link
G Ctdspl2 CTD small phosphatase like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5613417|PMID:25100727) MGI
Ensembl
PMID:25100727 GO_REF:0000107 MGI:5613417 NCBI chrNW_004936471:7,425,543...7,502,299
Ensembl chrNW_004936471:7,425,590...7,503,980
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,022,657...2,025,353
Ensembl chrNW_004936659:2,022,657...2,025,353
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,248,181...2,250,991
Ensembl chrNW_004936509:2,248,181...2,250,991
JBrowse link
G Fstl3 follistatin like 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1929020|PMID:11010968) MGI
Ensembl
PMID:11010968 GO_REF:0000107 MGI:1929020 NCBI chrNW_004936588:250,359...255,922
Ensembl chrNW_004936588:250,249...256,902
JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3033512|PMID:14627707) MGI
Ensembl
PMID:14627707 GO_REF:0000107 MGI:3033512 NCBI chrNW_004936621:2,899,183...2,903,427
Ensembl chrNW_004936621:2,900,995...2,902,947
JBrowse link
G Gdf3 growth differentiation factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937847:8,179...16,783
Ensembl chrNW_004937847:7,456...16,783
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714585|PMID:17522159) MGI
Ensembl
PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Grem2 gremlin 2, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,820,276...9,821,907
Ensembl chrNW_004936526:9,720,335...9,823,370
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Hjv hemojuvelin BMP co-receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4455113|PMID:20065295) MGI
Ensembl
PMID:20065295 GO_REF:0000107 MGI:4455113 NCBI chrNW_004936867:742,539...747,035
Ensembl chrNW_004936867:742,501...746,930
JBrowse link
G Htra1 HtrA serine peptidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3034116|PMID:14973287) MGI
Ensembl
PMID:14973287 GO_REF:0000107 MGI:3034116 NCBI chrNW_004936486:11,271,130...11,317,271
Ensembl chrNW_004936486:11,271,130...11,316,739
JBrowse link
G Htra3 HtrA serine peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:19,625,479...19,662,532
Ensembl chrNW_004936477:19,646,047...19,661,632
JBrowse link
G Lemd3 LEM domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,385,821...3,453,861
Ensembl chrNW_004936545:3,385,062...3,454,243
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935
JBrowse link
G Nanog Nanog homeobox acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3654744|PMID:16801560) MGI
Ensembl
PMID:16801560 GO_REF:0000107 MGI:3654744 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5492288|PMID:23676271) MGI
Ensembl
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chrNW_004936474:5,820,798...5,843,291
Ensembl chrNW_004936474:5,840,240...5,859,749
JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640733|PMID:16712836)
(MGI:3044331|PMID:15110716), (MGI:3590430|PMID:15975920), (MGI:4415813|PMID:18462699), (MGI:4429763|PMID:19850029)
(MGI:4397715|PMID:19852960)
MGI
Ensembl
InterPro
UniProt
PMID:15110716 PMID:15975920 PMID:16712836 PMID:18462699 PMID:19850029 More... GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 MGI:3044331 MGI:3590430 MGI:3640733 MGI:4397715 MGI:4415813 MGI:4429763 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma acts_upstream_of_or_within ISO (PMID:21743293) ARUK-UCL PMID:21743293 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5613417|PMID:25100727) MGI
Ensembl
PMID:25100727 GO_REF:0000107 MGI:5613417 NCBI chrNW_004936495:4,542,576...4,560,603
Ensembl chrNW_004936495:4,542,464...4,553,944
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300220|PMID:21937600) MGI
Ensembl
PMID:21937600 GO_REF:0000107 MGI:5300220 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631
JBrowse link
G Skor1 SKI family transcriptional corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,745,912...27,754,058
Ensembl chrNW_004936471:27,745,912...27,754,058
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300220|PMID:21937600) MGI
Ensembl
PMID:21937600 GO_REF:0000107 MGI:5300220 NCBI chrNW_004936983:156,466...197,281
Ensembl chrNW_004936983:161,836...197,276
JBrowse link
G Smad6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571
JBrowse link
G Smad7 SMAD family member 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:6,192,407...6,352,835
Ensembl chrNW_004936542:6,192,407...6,352,424
JBrowse link
G Sost sclerostin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3766170|PMID:17002572)
(PMID:14633986)
MGI
Ensembl
PMID:14633986 PMID:17002572 GO_REF:0000107 MGI:3766170 NCBI chrNW_004936541:313,308...318,109
Ensembl chrNW_004936541:313,287...318,176
JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681048|PMID:14623234), (MGI:3603904|PMID:16179481)
(MGI:3603904|PMID:16179481)
MGI
Ensembl
PMID:14623234 PMID:16179481 GO_REF:0000107 MGI:2681048 MGI:3603904 NCBI chrNW_004936546:2,976,045...2,980,487
Ensembl chrNW_004936546:2,975,606...2,980,514
JBrowse link
G Spart spartin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430704|PMID:22619377) MGI
Ensembl
PMID:22619377 GO_REF:0000107 MGI:5430704 NCBI chrNW_004936472:30,467,975...30,525,880
Ensembl chrNW_004936472:30,467,964...30,504,624
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:3763872|PMID:17919533) MGI PMID:17919533 MGI:3763872 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576
JBrowse link
G Tmem53 transmembrane protein 53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:25,897,032...25,914,873
Ensembl chrNW_004936474:25,896,980...25,914,963
JBrowse link
G Tmprss6 transmembrane serine protease 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5314735|PMID:19751239) Ensembl
MGI
PMID:19751239 GO_REF:0000107 MGI:5314735 NCBI chrNW_004936492:3,819,347...3,848,372
Ensembl chrNW_004936492:3,819,309...3,848,075
JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,129,339...26,145,464
Ensembl chrNW_004936469:26,129,331...26,145,422
JBrowse link
G Tob1 transducer of ERBB2, 1 acts_upstream_of_or_within ISO (MGI:1928565|PMID:11163184) MGI PMID:11163184 MGI:1928565 NCBI chrNW_004936490:10,876,113...10,880,267
Ensembl chrNW_004936490:10,876,113...10,880,256
JBrowse link
G Trim33 tripartite motif containing 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:2,709,059...2,898,399
Ensembl chrNW_004936690:2,709,061...2,830,450
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577114|PMID:15780974)
(MGI:2654977|PMID:12665593)
MGI
Ensembl
PMID:12665593 PMID:15780974 GO_REF:0000107 MGI:2654977 MGI:3577114 NCBI chrNW_004936626:1,901,686...1,946,554
Ensembl chrNW_004936626:1,901,680...1,946,460
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936686:1,844,435...2,016,953
Ensembl chrNW_004936686:1,861,537...2,015,255
JBrowse link
G Vwc2l von Willebrand factor C domain containing 2 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4397715|PMID:19852960) MGI
Ensembl
PMID:19852960 GO_REF:0000107 MGI:4397715 NCBI chrNW_004936586:2,387,526...2,538,871
Ensembl chrNW_004936586:2,387,138...2,538,669
JBrowse link
G Wnt1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3777488|PMID:18351662) MGI
Ensembl
PMID:18351662 GO_REF:0000107 MGI:3777488 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
negative regulation of nodal signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact2 dishevelled binding antagonist of beta catenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:17,370,190...17,379,327
Ensembl chrNW_004936489:17,370,341...17,379,327
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,022,657...2,025,353
Ensembl chrNW_004936659:2,022,657...2,025,353
JBrowse link
negative regulation of pathway-restricted SMAD protein phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223
JBrowse link
G Eng endoglin involved_in ISO (PMID:18974388) BHF-UCL PMID:18974388 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Ldlrad4 low density lipoprotein receptor class A domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:2,730,689...3,088,527
Ensembl chrNW_004936626:2,865,352...3,081,703
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:429,059...439,847
Ensembl chrNW_004936530:429,045...439,866
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28467929), (PMID:31023188) BHF-UCL PMID:28467929 PMID:31023188 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Smad6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
G Snx25 sorting nexin 25 involved_in ISO (PMID:21266196) UniProt PMID:21266196 NCBI chrNW_004936554:3,982,755...4,093,143
Ensembl chrNW_004936554:3,979,441...4,087,162
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:26315405) BHF-UCL PMID:26315405 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
negative regulation of SMAD protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlrad4 low density lipoprotein receptor class A domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:2,730,689...3,088,527
Ensembl chrNW_004936626:2,865,352...3,081,703
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:429,059...439,847
Ensembl chrNW_004936530:429,045...439,866
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,542,576...4,560,603
Ensembl chrNW_004936495:4,542,464...4,553,944
JBrowse link
G Smad6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943647|PMID:19661464) MGI
Ensembl
PMID:19661464 GO_REF:0000107 MGI:4943647 NCBI chrNW_004936478:10,887,900...10,939,510
Ensembl chrNW_004936478:10,888,045...10,939,564
JBrowse link
negative regulation of SMAD protein signal transduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn3 cellular communication network factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:27,178,439...27,185,554
Ensembl chrNW_004936470:27,178,621...27,185,564
JBrowse link
G Cilp cartilage intermediate layer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:25,501,538...25,517,033
Ensembl chrNW_004936471:25,501,179...25,517,144
JBrowse link
G LOC101955357 uncharacterized LOC101955357 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936862:405,205...413,920
Ensembl chrNW_004936862:404,476...413,561
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
JBrowse link
G Pbld phenazine biosynthesis like protein domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,943,061...9,998,421
Ensembl chrNW_004936521:9,984,783...9,998,858
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28467929), (PMID:31023188) BHF-UCL PMID:28467929 PMID:31023188 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16550171) ARUK-UCL
Ensembl
PMID:16550171 GO_REF:0000107 NCBI chrNW_004936514:6,490,728...6,504,152
Ensembl chrNW_004936514:6,493,512...6,497,063
JBrowse link
G Veph1 ventricular zone expressed PH domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:4,143,036...4,359,329
Ensembl chrNW_004936519:4,143,399...4,353,702
JBrowse link
negative regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
JBrowse link
G Adamtsl2 ADAMTS like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5638958|PMID:25762570) MGI
Ensembl
PMID:25762570 GO_REF:0000107 MGI:5638958 NCBI chrNW_004936669:3,363,991...3,397,099
Ensembl chrNW_004936669:3,363,867...3,397,402
JBrowse link
G Aspn asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:2,080,014...2,104,534
Ensembl chrNW_004936487:2,079,973...2,104,499
JBrowse link
G Bambi BMP and activin membrane bound inhibitor involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936613:3,098,549...3,103,868
Ensembl chrNW_004936613:3,098,159...3,103,868
JBrowse link
G Bcl9l BCL9 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,873,530...3,902,871
Ensembl chrNW_004936542:3,875,801...3,886,824
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28467929) ARUK-UCL
Ensembl
PMID:28467929 GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Brms1 BRMS1 transcriptional repressor and anoikis regulator involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936599:3,259,868...3,267,172
Ensembl chrNW_004936599:3,259,835...3,267,676
JBrowse link
G Brms1l BRMS1 like transcriptional repressor involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936494:9,885,446...9,926,978
Ensembl chrNW_004936494:9,885,067...9,929,130
JBrowse link
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5298182|PMID:21832243) MGI
Ensembl
PMID:21832243 GO_REF:0000107 MGI:5298182 NCBI chrNW_004936589:2,553,932...2,561,186
Ensembl chrNW_004936589:2,552,477...2,561,569
JBrowse link
G Cd109 CD109 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936859:467,958...595,337
Ensembl chrNW_004936859:484,923...595,316
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3767479|PMID:16079159) MGI
Ensembl
PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221
JBrowse link
G Cidea cell death inducing DFFA like effector a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:230,372...246,893
Ensembl chrNW_004936626:230,329...246,893
JBrowse link
G Cilp cartilage intermediate layer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:25,501,538...25,517,033
Ensembl chrNW_004936471:25,501,179...25,517,144
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055566|PMID:14721776) MGI
Ensembl
PMID:14721776 GO_REF:0000107 MGI:3055566 NCBI chrNW_004936659:2,022,657...2,025,353
Ensembl chrNW_004936659:2,022,657...2,025,353
JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:25100282 RGD:9685289 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188
JBrowse link
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,364,179...2,366,739
Ensembl chrNW_004936661:2,365,861...2,366,586
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,455,369...5,463,205
Ensembl chrNW_004936493:5,455,197...5,463,223
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:11583628) FlyBase PMID:11583628 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Glg1 golgi glycoprotein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4829577|PMID:20530870) MGI
Ensembl
PMID:20530870 GO_REF:0000107 MGI:4829577 NCBI chrNW_004936475:23,411,194...23,534,692
Ensembl chrNW_004936475:23,411,188...23,534,724
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3771280|PMID:17991893) MGI
Ensembl
PMID:17991893 GO_REF:0000107 MGI:3771280 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717
JBrowse link
G Htra1 HtrA serine peptidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3034116|PMID:14973287) MGI
Ensembl
PMID:14973287 GO_REF:0000107 MGI:3034116 NCBI chrNW_004936486:11,271,130...11,317,271
Ensembl chrNW_004936486:11,271,130...11,316,739
JBrowse link
G Htra3 HtrA serine peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:19,625,479...19,662,532
Ensembl chrNW_004936477:19,646,047...19,661,632
JBrowse link
G Il17rd interleukin 17 receptor D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,447,292...7,507,819
Ensembl chrNW_004936473:7,447,292...7,507,830
JBrowse link
G Ldlrad4 low density lipoprotein receptor class A domain containing 4 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936626:2,730,689...3,088,527
Ensembl chrNW_004936626:2,865,352...3,081,703
JBrowse link
G Lemd3 LEM domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,385,821...3,453,861
Ensembl chrNW_004936545:3,385,062...3,454,243
JBrowse link
G LOC101955831 heat shock 70 kDa protein 1 involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chrNW_004936727:1,718,952...1,721,691 JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G LOC101960907 uncharacterized LOC101960907 acts_upstream_of_or_within ISO (MGI:3588024|PMID:16103213) MGI PMID:16103213 MGI:3588024 NCBI chrNW_004936471:14,532,888...14,581,258
Ensembl chrNW_004936471:14,532,892...14,566,904
JBrowse link
G LOC101976665 nephrocan-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:664,616...679,163 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456
JBrowse link
G Mecom MDS1 and EVI1 complex locus NOT|involved_in ISO (PMID:15897867) UniProt PMID:15897867 NCBI chrNW_004936593:2,742,236...3,282,596
Ensembl chrNW_004936593:3,106,202...3,282,596
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:10,517,488...10,520,567
Ensembl chrNW_004936494:10,517,488...10,520,566
JBrowse link
G Onecut1 one cut homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588024|PMID:16103213) MGI
Ensembl
PMID:16103213 GO_REF:0000107 MGI:3588024 NCBI chrNW_004936497:6,853,739...6,896,408
Ensembl chrNW_004936497:6,854,238...6,895,660
JBrowse link
G Pbld phenazine biosynthesis like protein domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,943,061...9,998,421
Ensembl chrNW_004936521:9,984,783...9,998,858
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265
JBrowse link
G Peg10 paternally expressed 10 involved_in ISO (PMID:15611116) HGNC-UCL PMID:15611116 NCBI chrNW_004936585:5,437,807...5,451,185
Ensembl chrNW_004936585:5,441,493...5,443,868
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:309,530...321,294
Ensembl chrNW_004936659:309,506...321,334
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936530:429,059...439,847
Ensembl chrNW_004936530:429,045...439,866
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:31611175) ARUK-UCL
Ensembl
PMID:31611175 GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in
acts_upstream_of_or_within
ISO (PMID:31023188)
(PMID:28467929)
BHF-UCL
ARUK-UCL
PMID:28467929 PMID:31023188 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,542,576...4,560,603
Ensembl chrNW_004936495:4,542,464...4,553,944
JBrowse link
G Prdm16 PR/SET domain 16 NOT|involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:14656887)
(MGI:4430027|PMID:20007998)
UniProt
Ensembl
MGI
PMID:14656887 PMID:20007998 GO_REF:0000107 MGI:4430027 NCBI chrNW_004936737:400,819...446,768
Ensembl chrNW_004936737:404,846...446,985
JBrowse link
G Rasl11b RAS like family 11 member B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3505646|PMID:15239668) MGI
Ensembl
PMID:15239668 GO_REF:0000107 MGI:3505646 NCBI chrNW_004936482:15,731,822...15,736,195
Ensembl chrNW_004936482:15,731,771...15,736,206
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300220|PMID:21937600)
(PMID:15312649)
MGI
Ensembl
PMID:15312649 PMID:21937600 GO_REF:0000107 MGI:5300220 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631
JBrowse link
G Skil SKI like proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530729|PMID:15677329) MGI
Ensembl
PMID:15677329 GO_REF:0000107 MGI:3530729 NCBI chrNW_004936593:2,109,414...2,132,871
Ensembl chrNW_004936593:2,109,223...2,132,882
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 NOT|acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300220|PMID:21937600) MGI
Ensembl
PMID:21937600 GO_REF:0000107 MGI:5300220 NCBI chrNW_004936983:156,466...197,281
Ensembl chrNW_004936983:161,836...197,276
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16550171), (PMID:26376865) ARUK-UCL
Ensembl
PMID:16550171 PMID:26376865 GO_REF:0000107 NCBI chrNW_004936514:6,490,728...6,504,152
Ensembl chrNW_004936514:6,493,512...6,497,063
JBrowse link
G Smad6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323
JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:5,046,147...5,147,416
Ensembl chrNW_004936541:5,046,148...5,106,008
JBrowse link
G Snx1 sorting nexin 1 acts_upstream_of_or_within ISO (MGI:3505646|PMID:15239668) MGI PMID:15239668 MGI:3505646 NCBI chrNW_004936471:24,569,677...24,617,016
Ensembl chrNW_004936471:24,569,609...24,619,826
JBrowse link
G Snx25 sorting nexin 25 involved_in ISO (MGI:5545984|PMID:21266196)
(PMID:21266196)
UniProt PMID:21266196 MGI:5545984 NCBI chrNW_004936554:3,982,755...4,093,143
Ensembl chrNW_004936554:3,979,441...4,087,162
JBrowse link
G Snx6 sorting nexin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:8,819,695...8,880,298
Ensembl chrNW_004936494:8,821,147...8,879,446
JBrowse link
G Spred1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:1,952,532...2,039,561
Ensembl chrNW_004936471:1,952,532...2,037,501
JBrowse link
G Spred2 sprouty related EVH1 domain containing 2 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004936491:10,053,546...10,170,950
Ensembl chrNW_004936491:10,053,545...10,170,976
JBrowse link
G Spred3 sprouty related EVH1 domain containing 3 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004936801:1,150,897...1,160,016
Ensembl chrNW_004936801:1,150,782...1,160,178
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:2,241,928...2,245,616
Ensembl chrNW_004936662:2,243,326...2,244,291
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004936511:1,452,421...1,458,031 JBrowse link
G Strap serine/threonine kinase receptor associated protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1321347|PMID:9856985) MGI
Ensembl
PMID:9856985 GO_REF:0000107 MGI:1321347 NCBI chrNW_004936587:1,679,570...1,700,610
Ensembl chrNW_004936587:1,678,439...1,701,216
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936668:2,078,783...2,113,154
Ensembl chrNW_004936668:2,077,729...2,113,361
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO (MGI:3771280|PMID:17991893) MGI PMID:17991893 MGI:3771280 NCBI chrNW_004936596:451,483...453,892 JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:8,347,343...8,352,909
Ensembl chrNW_004936543:8,347,329...8,353,051
JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO RGD PMID:12071374 RGD:730235 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO RGD PMID:10746731 RGD:1579946 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3528807|PMID:15657445) MGI
Ensembl
PMID:15657445 GO_REF:0000107 MGI:3528807 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Vasn vasorin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:128,398...138,954
Ensembl chrNW_004936694:128,273...138,954
JBrowse link
G Veph1 ventricular zone expressed PH domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:4,143,036...4,359,329
Ensembl chrNW_004936519:4,143,399...4,353,702
JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:371,328...375,271
Ensembl chrNW_004936501:371,384...373,859
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:10,897,390...10,903,605
Ensembl chrNW_004936490:10,897,292...10,903,765
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628833|PMID:16601693) MGI
Ensembl
PMID:16601693 GO_REF:0000107 MGI:3628833 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:26315405) BHF-UCL PMID:26315405 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,310,975...2,321,790
Ensembl chrNW_004936588:2,311,727...2,321,372
JBrowse link
G Znf451 zinc finger protein 451 involved_in ISO (PMID:24324267) UniProt PMID:24324267 NCBI chrNW_004936476:4,133,803...4,268,834 JBrowse link
negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fstl3 follistatin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:250,359...255,922
Ensembl chrNW_004936588:250,249...256,902
JBrowse link
nodal signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,407,578...9,449,611
Ensembl chrNW_004936512:9,407,581...9,449,632
JBrowse link
G Acvr1c activin A receptor type 1C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,892,715...20,964,674
Ensembl chrNW_004936469:20,892,466...20,960,098
JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in ISO (MGI:5447629|PMID:11389842)
(MGI:5318034|PMID:12052855)
UniProt PMID:11389842 PMID:12052855 MGI:5318034 MGI:5447629 NCBI chrNW_004936596:451,483...453,892 JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004936672:1,128,104...1,135,844
Ensembl chrNW_004936672:1,128,108...1,136,292
JBrowse link
G Tgif2 TGFB induced factor homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430444|PMID:20040491) MGI
Ensembl
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chrNW_004936561:4,450,093...4,465,358
Ensembl chrNW_004936561:4,450,026...4,465,341
JBrowse link
nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
pathway-restricted SMAD protein phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Amh anti-Mullerian hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,342,791...1,345,746
Ensembl chrNW_004936588:1,343,085...1,345,654
JBrowse link
G Amhr2 anti-Mullerian hormone receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:10,706,043...10,712,797
Ensembl chrNW_004936512:10,705,350...10,713,517
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gdf6 growth differentiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:46,361,528...46,379,576
Ensembl chrNW_004936470:46,361,451...46,377,594
JBrowse link
G Gdf7 growth differentiation factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:978,318...1,094,729
Ensembl chrNW_004936545:978,280...1,095,659
JBrowse link
positive regulation of activin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,407,578...9,449,611
Ensembl chrNW_004936512:9,407,581...9,449,632
JBrowse link
G Acvr2a activin A receptor type 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Acvr2b activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,816,366...27,822,555
Ensembl chrNW_004936473:27,815,399...27,822,476
JBrowse link
G Csnk2b casein kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,857,596...1,862,551
Ensembl chrNW_004936727:1,857,596...1,862,002
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5444317|PMID:23034635) MGI
Ensembl
PMID:23034635 GO_REF:0000107 MGI:5444317 NCBI chrNW_004936720:282,291...316,629
Ensembl chrNW_004936720:279,521...316,674
JBrowse link
G LOC101967553 synaptojanin-2-binding protein involved_in ISO (MGI:3623710|PMID:16648306) UniProt PMID:16648306 MGI:3623710 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914
JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Zc3h3 zinc finger CCCH-type containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3619747|PMID:16115198) MGI
Ensembl
PMID:16115198 GO_REF:0000107 MGI:3619747 NCBI chrNW_004936470:8,591,564...8,675,505
Ensembl chrNW_004936470:8,591,540...8,675,519
JBrowse link
positive regulation of BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Ccn1 cellular communication network factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358
JBrowse link
G Cdh5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:16,738,772...16,775,000
Ensembl chrNW_004936475:16,738,748...16,775,123
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934
JBrowse link
G Elapor2 endosome-lysosome associated apoptosis and autophagy regulator family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:560,378...621,497
Ensembl chrNW_004936653:560,858...718,063
JBrowse link
G Eng endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Fbxl15 F-box and leucine rich repeat protein 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,445,840...3,450,369
Ensembl chrNW_004936600:3,442,778...3,448,467
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716) MGI
Ensembl
PMID:18590716 GO_REF:0000107 MGI:3806189 NCBI chrNW_004936596:2,728,089...2,735,718
Ensembl chrNW_004936596:2,728,114...2,735,317
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO PMID:12606287 BHF-UCL PMID:12606287 RGD:8554170 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Gata6 GATA binding protein 6 involved_in ISO PMID:12606287 BHF-UCL PMID:12606287 RGD:8554170 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gdf5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583399|PMID:15925496) MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chrNW_004936691:1,060,013...1,459,736
Ensembl chrNW_004936691:1,059,994...1,459,740
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807421|PMID:18579678) MGI
Ensembl
PMID:18579678 GO_REF:0000107 MGI:3807421 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622
JBrowse link
G Hes5 hes family bHLH transcription factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807421|PMID:18579678) MGI
Ensembl
PMID:18579678 GO_REF:0000107 MGI:3807421 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950
JBrowse link
G Ilk integrin linked kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:661,961...667,993
Ensembl chrNW_004936842:661,996...667,993
JBrowse link
G Kcp kielin cysteine rich BMP regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3575605|PMID:15793581) MGI
Ensembl
PMID:15793581 GO_REF:0000107 MGI:3575605 NCBI chrNW_004936479:15,801,196...15,826,461
Ensembl chrNW_004936479:15,801,380...15,826,461
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G LOC101965998 notch receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5492288|PMID:23676271) MGI
Ensembl
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3810851|PMID:18667074) MGI
Ensembl
PMID:18667074 GO_REF:0000107 MGI:3810851 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3810851|PMID:18667074) MGI
Ensembl
PMID:18667074 GO_REF:0000107 MGI:3810851 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO (MGI:4455113|PMID:20065295) MGI PMID:20065295 MGI:4455113 NCBI chrNW_004936471:32,345,578...32,517,245
Ensembl chrNW_004936471:32,292,745...32,516,624
JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,358,598...1,438,041
Ensembl chrNW_004936498:1,359,285...1,438,382
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5705244|PMID:24835669) MGI
Ensembl
PMID:24835669 GO_REF:0000107 MGI:5705244 NCBI chrNW_004936480:14,578,718...14,580,690
Ensembl chrNW_004936480:14,577,381...14,582,144
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797
JBrowse link
G Rnf165 ring finger protein 165 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5499270|PMID:23610558) MGI
Ensembl
PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chrNW_004936517:428,689...531,360
Ensembl chrNW_004936517:429,292...531,361
JBrowse link
G Scube3 signal peptide, CUB domain and EGF like domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,962,956...23,987,629
Ensembl chrNW_004936476:23,966,847...23,998,663
JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chrNW_004937107:203,120...207,185 JBrowse link
G Sulf1 sulfatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:4,755,806...4,931,964
Ensembl chrNW_004936496:4,755,754...4,893,027
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of
involved_in
ISO
IEA
(MGI:5299248|PMID:21983003) BHF-UCL
Ensembl
PMID:21983003 GO_REF:0000107 MGI:5299248 NCBI chrNW_004936478:10,887,900...10,939,510
Ensembl chrNW_004936478:10,888,045...10,939,564
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (MGI:5617089|PMID:25382630) MGI PMID:25382630 MGI:5617089 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2654977|PMID:12665593) MGI
Ensembl
PMID:12665593 GO_REF:0000107 MGI:2654977 NCBI chrNW_004936626:1,901,686...1,946,554
Ensembl chrNW_004936626:1,901,680...1,946,460
JBrowse link
G Ube2o ubiquitin conjugating enzyme E2 O involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,490,257...1,554,610
Ensembl chrNW_004936594:1,490,198...1,542,943
JBrowse link
G Znf423 zinc finger protein 423 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:2,699,722...2,956,734
Ensembl chrNW_004936475:2,699,702...3,010,912
JBrowse link
positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (MGI:5584215|PMID:24585447) MGI PMID:24585447 MGI:5584215 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191
JBrowse link
positive regulation of pathway-restricted SMAD protein phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Acvr1b activin A receptor type 1B ISO RGD PMID:17040568 RGD:2315948 NCBI chrNW_004936512:9,407,578...9,449,611
Ensembl chrNW_004936512:9,407,581...9,449,632
JBrowse link
G Acvr2a activin A receptor type 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,180,086...13,186,004
Ensembl chrNW_004936491:13,180,086...13,186,004
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354
JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Csnk2b casein kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,857,596...1,862,551
Ensembl chrNW_004936727:1,857,596...1,862,002
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875
JBrowse link
G Eng endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Gdf10 growth differentiation factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,292,805...7,307,001
Ensembl chrNW_004936554:7,292,767...7,307,009
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Gdf6 growth differentiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:46,361,528...46,379,576
Ensembl chrNW_004936470:46,361,451...46,377,594
JBrowse link
G Gdf7 growth differentiation factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761
JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580
JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:19736306) BHF-UCL PMID:19736306 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Lgals9 galectin 9 involved_in ISO (MGI:5688819|PMID:25065622) UniProt PMID:25065622 MGI:5688819 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:31023188)
(MGI:6434720|PMID:31023188)
BHF-UCL PMID:31023188 MGI:6434720 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Rbpms RNA binding protein, mRNA processing factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936792:236,509...404,510
Ensembl chrNW_004936792:236,503...404,510
JBrowse link
G Sdcbp syndecan binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,331,971...14,347,123
Ensembl chrNW_004936496:14,331,662...14,347,197
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:18358889) ComplexPortal PMID:18358889 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (MGI:2683382|PMID:14691138) BHF-UCL PMID:14691138 MGI:2683382 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:1,901,686...1,946,554
Ensembl chrNW_004936626:1,901,680...1,946,460
JBrowse link
positive regulation of SMAD protein signal transduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of
involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3795340|PMID:18382765)
(PMID:18382765)
BHF-UCL
Ensembl
PMID:18382765 GO_REF:0000107 MGI:3795340 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18382765) BHF-UCL
Ensembl
PMID:18382765 GO_REF:0000107 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875
JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28334068) MGI
Ensembl
PMID:28334068 GO_REF:0000107 NCBI chrNW_004936503:111,722...243,627
Ensembl chrNW_004936503:110,963...241,867
JBrowse link
G Kiaa0319 KIAA0319 ortholog acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28334068) MGI
Ensembl
PMID:28334068 GO_REF:0000107 NCBI chrNW_004936671:870,107...912,727
Ensembl chrNW_004936671:870,695...912,727
JBrowse link
G Nodal nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nup93 nucleoporin 93 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,930,320...9,027,840
Ensembl chrNW_004936475:8,930,314...9,032,287
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:31023188)
(MGI:6434720|PMID:31023188)
BHF-UCL PMID:31023188 MGI:6434720 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
G Rbpms RNA binding protein, mRNA processing factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936792:236,509...404,510
Ensembl chrNW_004936792:236,503...404,510
JBrowse link
G Sh2b1 SH2B adaptor protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28334068) MGI
Ensembl
PMID:28334068 GO_REF:0000107 NCBI chrNW_004936501:11,840,227...11,849,742
Ensembl chrNW_004936501:11,840,190...11,848,780
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (MGI:2683382|PMID:14691138) BHF-UCL PMID:14691138 MGI:2683382 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097
JBrowse link
positive regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (MGI:3829110|PMID:18625725) BHF-UCL PMID:18625725 MGI:3829110 NCBI chrNW_004936532:5,864,851...5,904,005
Ensembl chrNW_004936532:5,864,867...5,904,003
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628833|PMID:16601693) MGI
Ensembl
PMID:16601693 GO_REF:0000107 MGI:3628833 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C involved_in ISO (PMID:16943770) BHF-UCL PMID:16943770 NCBI chrNW_004936794:1,023,891...1,025,470 JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Crebbp CREB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617
JBrowse link
G CUNH20orf27 adipose secreted signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,930,525...14,942,951
Ensembl chrNW_004936485:14,930,517...14,942,951
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875
JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,985,552...13,016,997
Ensembl chrNW_004936485:12,985,552...13,016,906
JBrowse link
G Flcn folliculin acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:5050037|PMID:21258407) MGI
Ensembl
UniProt
PMID:21258407 GO_REF:0000024 GO_REF:0000107 MGI:5050037 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468
JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme ISO RGD PMID:15194465 RGD:1582619 NCBI chrNW_004936483:16,136,099...16,147,945
Ensembl chrNW_004936483:16,136,099...16,144,635
JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:3,019,829...3,030,280
Ensembl chrNW_004936659:3,012,012...3,026,883
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:26880260 RGD:13504840 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:15,830,459...15,836,994
Ensembl chrNW_004936476:15,830,459...15,835,535
JBrowse link
G Ing2 inhibitor of growth family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:5,585,953...5,593,536
Ensembl chrNW_004936554:5,587,548...5,593,635
JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chrNW_004936574:5,985,181...6,155,067
Ensembl chrNW_004936574:5,984,939...6,155,164
JBrowse link
G Lrg1 leucine rich alpha-2-glycoprotein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543310|PMID:23868260) MGI
Ensembl
PMID:23868260 GO_REF:0000107 MGI:5543310 NCBI chrNW_004936588:2,638,597...2,640,856
Ensembl chrNW_004936588:2,638,601...2,640,868
JBrowse link
G Men1 menin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,504,489...4,510,085
Ensembl chrNW_004936599:4,504,397...4,510,555
JBrowse link
G Myocd myocardin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:5,256,615...5,356,563
Ensembl chrNW_004936595:5,256,785...5,351,723
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chrNW_004936814:1,096,604...1,165,755
Ensembl chrNW_004936814:1,095,974...1,165,866
JBrowse link
G Rnf111 ring finger protein 111 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628833|PMID:16601693) MGI
Ensembl
PMID:16601693 GO_REF:0000107 MGI:3628833 NCBI chrNW_004936471:20,139,798...20,210,291
Ensembl chrNW_004936471:20,139,413...20,211,130
JBrowse link
G Sdcbp syndecan binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,331,971...14,347,123
Ensembl chrNW_004936496:14,331,662...14,347,197
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26376865) ARUK-UCL
Ensembl
PMID:26376865 GO_REF:0000107 NCBI chrNW_004936514:6,490,728...6,504,152
Ensembl chrNW_004936514:6,493,512...6,497,063
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Snw1 SNW domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,494,556...6,531,297
Ensembl chrNW_004936488:6,494,562...6,531,600
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:8,347,343...8,352,909
Ensembl chrNW_004936543:8,347,329...8,353,051
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (MGI:5617089|PMID:25382630) RGD
MGI
PMID:8106553 PMID:25382630 MGI:5617089 RGD:1579949 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267
JBrowse link
positive regulation of Wnt signaling pathway by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3850932|PMID:19213727) MGI
Ensembl
PMID:19213727 GO_REF:0000107 MGI:3850932 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
regulation of activin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588480|PMID:15958512) MGI
Ensembl
PMID:15958512 GO_REF:0000107 MGI:3588480 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:16720724) BHF-UCL PMID:16720724 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Men1 menin 1 ISO RGD PMID:15031321 RGD:2290185 NCBI chrNW_004936599:4,504,489...4,510,085
Ensembl chrNW_004936599:4,504,397...4,510,555
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
regulation of BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716) MGI
Ensembl
PMID:18590716 GO_REF:0000107 MGI:3806189 NCBI chrNW_004936596:2,728,089...2,735,718
Ensembl chrNW_004936596:2,728,114...2,735,317
JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662001|PMID:12783783) MGI
Ensembl
PMID:12783783 GO_REF:0000107 MGI:2662001 NCBI chrNW_004936478:3,824,715...3,827,277
Ensembl chrNW_004936478:3,824,715...3,827,277
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,553,904...11,583,387
Ensembl chrNW_004936490:11,553,861...11,583,380
JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709795|PMID:17359964) MGI
Ensembl
PMID:17359964 GO_REF:0000107 MGI:3709795 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718174|PMID:17472960) MGI
Ensembl
PMID:17472960 GO_REF:0000107 MGI:3718174 NCBI chrNW_004936483:9,753,112...9,792,817
Ensembl chrNW_004936483:9,766,275...9,793,001
JBrowse link
G Sfrp4 secreted frizzled related protein 4 involved_in ISO (MGI:5790095|PMID:27355534) UniProt PMID:27355534 MGI:5790095 NCBI chrNW_004936478:13,257,183...13,266,972
Ensembl chrNW_004936478:13,257,801...13,266,701
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:9,855,992...9,884,788
Ensembl chrNW_004936476:9,857,773...9,884,784
JBrowse link
regulation of nodal signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact1 dishevelled binding antagonist of beta catenin 1 NOT|involved_in ISO (PMID:17197390)
(MGI:5437437|PMID:17197390)
UniProt PMID:17197390 MGI:5437437 NCBI chrNW_004936495:3,017,029...3,026,759
Ensembl chrNW_004936495:3,017,150...3,025,684
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5487845|PMID:23473982) MGI
Ensembl
PMID:23473982 GO_REF:0000107 MGI:5487845 NCBI chrNW_004936503:3,944,941...4,049,132
Ensembl chrNW_004936503:3,944,933...4,049,132
JBrowse link
regulation of pathway-restricted SMAD protein phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Bmper BMP binding endothelial regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:9,705,634...9,941,382
Ensembl chrNW_004936478:9,705,604...9,941,340
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:309,530...321,294
Ensembl chrNW_004936659:309,506...321,334
JBrowse link
regulation of SMAD protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:22073128 RGD:8554355 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
regulation of SMAD protein signal transduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G Ovol2 ovo like zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540
JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2449899|PMID:12543979) MGI
Ensembl
PMID:12543979 GO_REF:0000107 MGI:2449899 NCBI chrNW_004936491:920,830...1,108,374
Ensembl chrNW_004936491:956,986...1,108,640
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:25893292) UniProt PMID:25893292 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tob1 transducer of ERBB2, 1 acts_upstream_of_or_within ISO (MGI:1928565|PMID:11163184) MGI PMID:11163184 MGI:1928565 NCBI chrNW_004936490:10,876,113...10,880,267
Ensembl chrNW_004936490:10,876,113...10,880,256
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936758:101,629...225,496
Ensembl chrNW_004936758:101,620...225,525
JBrowse link
regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9 transcription coactivator NOT|involved_in ISO (PMID:19328798) BHF-UCL PMID:19328798 NCBI chrNW_004936867:136,798...158,936
Ensembl chrNW_004936867:139,418...158,763
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4946902|PMID:21182936) MGI
Ensembl
PMID:21182936 GO_REF:0000107 MGI:4946902 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335654|PMID:10208746) MGI
Ensembl
PMID:10208746 GO_REF:0000107 MGI:1335654 NCBI chrNW_004936659:2,022,657...2,025,353
Ensembl chrNW_004936659:2,022,657...2,025,353
JBrowse link
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,364,179...2,366,739
Ensembl chrNW_004936661:2,365,861...2,366,586
JBrowse link
G Eng endoglin involved_in ISO
IEA
RGD
Ensembl
PMID:17376778 GO_REF:0000107 RGD:2313627 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Folr1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226
JBrowse link
G Gdf2 growth differentiation factor 2 NOT|involved_in ISO (MGI:4830635|PMID:20406889) DFLAT PMID:20406889 MGI:4830635 NCBI chrNW_004936554:7,307,461...7,322,048
Ensembl chrNW_004936554:7,316,435...7,322,060
JBrowse link
G Il17f interleukin 17F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,579,282...8,580,916
Ensembl chrNW_004936476:8,574,387...8,580,916
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,553,904...11,583,387
Ensembl chrNW_004936490:11,553,861...11,583,380
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879
JBrowse link
G Lats2 large tumor suppressor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:735,326...795,596
Ensembl chrNW_004936720:735,524...793,696
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5634219|PMID:25715398) MGI
Ensembl
PMID:25715398 GO_REF:0000107 MGI:5634219 NCBI chrNW_004936575:2,526,067...2,533,996
Ensembl chrNW_004936575:2,524,342...2,533,559
JBrowse link
G Nrep neuronal regeneration related protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3034115|PMID:14985127) MGI
Ensembl
PMID:14985127 GO_REF:0000107 MGI:3034115 NCBI chrNW_004936531:6,077,691...6,105,517
Ensembl chrNW_004936531:6,077,716...6,104,479
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:10,636,762...10,729,060
Ensembl chrNW_004936495:10,636,670...10,725,647
JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153314|PMID:11711431) MGI
Ensembl
PMID:11711431 GO_REF:0000107 MGI:2153314 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Smad7 SMAD family member 7 ISO RGD PMID:11959632 RGD:625758 NCBI chrNW_004936497:13,894,586...13,921,978
Ensembl chrNW_004936497:13,894,580...13,922,065
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (PMID:20624318) UniProt PMID:20624318 NCBI chrNW_004937107:203,120...207,185 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Trim33 tripartite motif containing 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:2,709,059...2,898,399
Ensembl chrNW_004936690:2,709,061...2,830,450
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3641341|PMID:16824956) MGI
Ensembl
PMID:16824956 GO_REF:0000107 MGI:3641341 NCBI chrNW_004936574:17,643...175,762
Ensembl chrNW_004936574:17,684...178,293
JBrowse link
G Znf703 zinc finger protein 703 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,155,007...1,158,972
Ensembl chrNW_004936710:1,155,006...1,158,974
JBrowse link
sequestering of BMP from receptor via BMP binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem2 gremlin 2, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,820,276...9,821,907
Ensembl chrNW_004936526:9,720,335...9,823,370
JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:5,820,798...5,843,291
Ensembl chrNW_004936474:5,840,240...5,859,749
JBrowse link
sequestering of BMP in extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:9660951)
(MGI:1858315|PMID:10748465)
BHF-UCL PMID:9660951 PMID:10748465 MGI:1858315 NCBI chrNW_004936539:8,321,432...8,323,909 JBrowse link
G Fbn1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:10,747,030...10,969,223
Ensembl chrNW_004936471:10,746,996...10,969,231
JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:5,820,798...5,843,291
Ensembl chrNW_004936474:5,840,240...5,859,749
JBrowse link
sequestering of nodal from receptor via nodal binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dand5 DAN domain BMP antagonist family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,022,657...2,025,353
Ensembl chrNW_004936659:2,022,657...2,025,353
JBrowse link
sequestering of TGFbeta in extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbn1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:10,747,030...10,969,223
Ensembl chrNW_004936471:10,746,996...10,969,231
JBrowse link
G Fbn2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:1,535,629...1,757,386
Ensembl chrNW_004936504:1,535,624...1,757,435
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:253,390...640,140
Ensembl chrNW_004936493:253,216...640,140
JBrowse link
G Nrros negative regulator of reactive oxygen species involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,222,381...1,250,501
Ensembl chrNW_004936784:1,222,042...1,250,565
JBrowse link
SMAD protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,364,179...2,366,739
Ensembl chrNW_004936661:2,365,861...2,366,586
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:16720724) BHF-UCL PMID:16720724 NCBI chrNW_004936485:17,305,376...17,311,797 JBrowse link
G Smad1 SMAD family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:3,582,512...3,626,312
Ensembl chrNW_004936535:3,582,489...3,657,063
JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO
IEA
RGD
Ensembl
PMID:16959941 GO_REF:0000107 RGD:1599906 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
SMAD protein signal transduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abtb3 ankyrin repeat and BTB domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936492:7,480,372...7,514,301
Ensembl chrNW_004936492:7,482,250...7,736,269
JBrowse link
G Afp alpha fetoprotein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936598:2,058,474...2,077,711
Ensembl chrNW_004936598:2,058,117...2,077,728
JBrowse link
G Apela apelin receptor early endogenous ligand acts_upstream_of_or_within ISO (MGI:5486383|PMID:23390484) MGI PMID:23390484 MGI:5486383 NCBI chrNW_004936555:969,902...978,736 JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,529,508...1,552,148
Ensembl chrNW_004936712:1,529,420...1,552,185
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (MGI:1195384|PMID:9420335) MGI PMID:9420335 MGI:1195384 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Gdf11 growth differentiation factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:215,101...227,296
Ensembl chrNW_004936646:216,946...224,321
JBrowse link
G Gdf15 growth differentiation factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,854,620...2,857,018
Ensembl chrNW_004936596:2,854,841...2,857,111
JBrowse link
G Gdf5 growth differentiation factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G Gdf6 growth differentiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:46,361,528...46,379,576
Ensembl chrNW_004936470:46,361,451...46,377,594
JBrowse link
G Hexa hexosaminidase subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6454091|PMID:30467097) MGI
Ensembl
PMID:30467097 GO_REF:0000107 MGI:6454091 NCBI chrNW_004936469:18,581,855...18,650,109
Ensembl chrNW_004936469:18,581,840...18,650,123
JBrowse link
G Jade2 jade family PHD finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936647:740,689...795,252
Ensembl chrNW_004936647:740,651...782,810
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Lnpep leucyl and cystinyl aminopeptidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936523:6,443,571...6,533,122
Ensembl chrNW_004936523:6,445,939...6,532,566
JBrowse link
G LOC101970551 inhibitor of carbonic anhydrase acts_upstream_of_or_within ISO (MGI:1195384|PMID:9420335) MGI PMID:9420335 MGI:1195384 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
G LOC101970831 serotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394
JBrowse link
G LOC110596870 RNA-binding protein 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936599:2,968,178...2,984,033
Ensembl chrNW_004936599:2,975,350...2,984,060
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:1353670|PMID:10681527) UniProt PMID:10681527 MGI:1353670 NCBI chrNW_004936479:21,373,917...22,062,498
Ensembl chrNW_004936479:21,373,746...21,920,214
JBrowse link
G Nceh1 neutral cholesterol ester hydrolase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936593:66,098...128,056
Ensembl chrNW_004936593:66,509...127,625
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705
JBrowse link
G Nup93 nucleoporin 93 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,930,320...9,027,840
Ensembl chrNW_004936475:8,930,314...9,032,287
JBrowse link
G Pias2 protein inhibitor of activated STAT 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chrNW_004936517:72,676...152,926
Ensembl chrNW_004936517:82,332...144,586
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chrNW_004936796:630,307...675,157
Ensembl chrNW_004936796:630,756...674,279
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157
JBrowse link
G Ski SKI proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631
JBrowse link
G Slc33a1 solute carrier family 33 member 1 involved_in ISO (PMID:25402622) UniProt PMID:25402622 NCBI chrNW_004936519:3,038,895...3,061,215
Ensembl chrNW_004936519:3,036,106...3,061,271
JBrowse link
G Smad1 SMAD family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:3,582,512...3,626,312
Ensembl chrNW_004936535:3,582,489...3,657,063
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Smad5 SMAD family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:3,225,374...3,264,604
Ensembl chrNW_004936597:3,225,374...3,264,604
JBrowse link
G Smad9 SMAD family member 9 involved_in ISO (MGI:4352622|PMID:19252488) BHF-UCL PMID:19252488 MGI:4352622 NCBI chrNW_004936472:30,980,850...31,050,138
Ensembl chrNW_004936472:30,980,928...31,049,618
JBrowse link
G Stoml1 stomatin like 1 acts_upstream_of_or_within ISO (MGI:5486383|PMID:23390484) MGI PMID:23390484 MGI:5486383 NCBI chrNW_004936471:33,123,662...33,133,017
Ensembl chrNW_004936471:33,124,345...33,132,931
JBrowse link
G Sub1 SUB1 regulator of transcription acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936518:8,236,026...8,249,007
Ensembl chrNW_004936518:8,233,338...8,249,549
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195384|PMID:9420335) MGI
Ensembl
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Vim vimentin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486383|PMID:23390484) MGI
Ensembl
PMID:23390484 GO_REF:0000107 MGI:5486383 NCBI chrNW_004936520:10,051,692...10,059,324
Ensembl chrNW_004936520:10,052,012...10,059,182
JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:444,599...664,533
Ensembl chrNW_004936521:444,598...581,800
JBrowse link
G Zmiz2 zinc finger MIZ-type containing 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chrNW_004936478:19,616,850...19,637,958
Ensembl chrNW_004936478:19,616,849...19,638,125
JBrowse link
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
transforming growth factor beta receptor complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C ISO TbetaR-II, ActR-II (Chlorocebus aethiops), ligand-dependent RGD PMID:8940033 RGD:631880 NCBI chrNW_004936469:20,892,715...20,964,674
Ensembl chrNW_004936469:20,892,466...20,960,098
JBrowse link
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,364,179...2,366,739
Ensembl chrNW_004936661:2,365,861...2,366,586
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO RGD PMID:8106553 RGD:1579949 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895
JBrowse link
transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1935017|PMID:11376112) MGI
Ensembl
PMID:11376112 GO_REF:0000107 MGI:1935017 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569
JBrowse link
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679137|PMID:14580334) MGI
Ensembl
PMID:14580334 GO_REF:0000107 MGI:2679137 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:2,301,470...2,388,533
Ensembl chrNW_004936710:2,301,730...2,387,695
JBrowse link
G Amhr2 anti-Mullerian hormone receptor type 2 acts_upstream_of_or_within ISO PMID:11376112 MGI PMID:11376112 RGD:8554753 NCBI chrNW_004936512:10,706,043...10,712,797
Ensembl chrNW_004936512:10,705,350...10,713,517
JBrowse link
G Apoa1 apolipoprotein A1 NOT|involved_in ISO (PMID:23726972) UniProt PMID:23726972 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854
JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923
JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692
JBrowse link
G Arrb2 arrestin beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520
JBrowse link
G Bambi BMP and activin membrane bound inhibitor ISO RGD PMID:12933693 RGD:632261 NCBI chrNW_004936613:3,098,549...3,103,868
Ensembl chrNW_004936613:3,098,159...3,103,868
JBrowse link
G Cav2 caveolin 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:5298182|PMID:21832243) MGI
Ensembl
PMID:21832243 GO_REF:0000107 MGI:5298182 NCBI chrNW_004936589:2,553,932...2,561,186
Ensembl chrNW_004936589:2,552,477...2,561,569
JBrowse link
G Cdh5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:16,738,772...16,775,000
Ensembl chrNW_004936475:16,738,748...16,775,123
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of
involved_in
ISO
IEA
(MGI:3767479|PMID:16079159) MGI
Ensembl
PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3690196|PMID:16619037) MGI
Ensembl
PMID:16619037 GO_REF:0000107 MGI:3690196 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735
JBrowse link
G Cldn5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:3,455,508...3,457,053
Ensembl chrNW_004936619:3,456,166...3,456,822
JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:5,650,322...5,686,393
Ensembl chrNW_004936585:5,651,180...5,685,923
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:16891311 RGD:1625706 NCBI chrNW_004936631:3,721,307...3,785,346
Ensembl chrNW_004936631:3,721,313...3,780,892
JBrowse link
G Dusp22 dual specificity phosphatase 22 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2387732|PMID:12138158) MGI
Ensembl
PMID:12138158 GO_REF:0000107 MGI:2387732 NCBI chrNW_004936633:1,459,487...1,528,080
Ensembl chrNW_004936633:1,459,386...1,528,082
JBrowse link
G Eng endoglin NOT|involved_in ISO
IEA
(PMID:18223685) BHF-UCL
Ensembl
PMID:18223685 GO_REF:0000107 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,927,817...2,008,268
Ensembl chrNW_004936697:1,927,812...2,008,268
JBrowse link
G Flcn folliculin acts_upstream_of
involved_in
ISO
IEA
(MGI:5050037|PMID:21258407) MGI
Ensembl
PMID:21258407 GO_REF:0000107 MGI:5050037 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122
JBrowse link
G Foxh1 forkhead box H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,789,486...7,791,067
Ensembl chrNW_004936470:7,789,541...7,791,039
JBrowse link
G Fshb follicle stimulating hormone subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:7,395,206...7,397,266
Ensembl chrNW_004936533:7,395,206...7,397,266
JBrowse link
G Fut8 fucosyltransferase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608245|PMID:16236725) MGI
Ensembl
PMID:16236725 GO_REF:0000107 MGI:3608245 NCBI chrNW_004936495:9,012,425...9,341,538
Ensembl chrNW_004936495:9,115,938...9,344,068
JBrowse link
G Glg1 golgi glycoprotein 1 acts_upstream_of
involved_in
ISO
IEA
(MGI:4829577|PMID:20530870) MGI
Ensembl
PMID:20530870 GO_REF:0000107 MGI:4829577 NCBI chrNW_004936475:23,411,194...23,534,692
Ensembl chrNW_004936475:23,411,188...23,534,724
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3696537|PMID:17159989) MGI
Ensembl
PMID:17159989 GO_REF:0000107 MGI:3696537 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Hpgd 15-hydroxyprostaglandin dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:5,551,192...5,578,796
Ensembl chrNW_004936516:5,550,203...5,578,832
JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chrNW_004936574:5,985,181...6,155,067
Ensembl chrNW_004936574:5,984,939...6,155,164
JBrowse link
G Itgb1 integrin subunit beta 1 NOT|involved_in ISO (PMID:24036928)
(MGI:5582864|PMID:24036928)
UniProt PMID:24036928 MGI:5582864 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Itgb5 integrin subunit beta 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936725:417,824...530,993
Ensembl chrNW_004936725:417,433...532,760
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3040752|PMID:12634787)
(MGI:6376388|PMID:30952606)
MGI
Ensembl
PMID:12634787 PMID:30952606 GO_REF:0000107 MGI:3040752 MGI:6376388 NCBI chrNW_004936469:18,581,855...18,650,109
Ensembl chrNW_004936469:18,581,840...18,650,123
JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6376388|PMID:30952606) MGI
Ensembl
PMID:30952606 GO_REF:0000107 MGI:6376388 NCBI chrNW_004936546:6,352,186...6,447,458
Ensembl chrNW_004936546:6,353,986...6,442,756
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G LOC101960907 uncharacterized LOC101960907 acts_upstream_of ISO (MGI:3588024|PMID:16103213) MGI PMID:16103213 MGI:3588024 NCBI chrNW_004936471:14,532,888...14,581,258
Ensembl chrNW_004936471:14,532,892...14,566,904
JBrowse link
G LOC101978685 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:2,311,217...2,366,327
Ensembl chrNW_004936534:2,309,480...2,388,249
JBrowse link
G Lrrc32 leucine rich repeat containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:5,305,680...5,315,580
Ensembl chrNW_004936498:5,305,545...5,315,539
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:72661|PMID:7730318)
(MGI:2389565|PMID:12379497)
MGI
Ensembl
PMID:7730318 PMID:12379497 GO_REF:0000107 MGI:2389565 MGI:72661 NCBI chrNW_004936599:3,902,903...3,918,471
Ensembl chrNW_004936599:3,902,897...3,918,471
JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2386340|PMID:12208849) MGI
Ensembl
PMID:12208849 GO_REF:0000107 MGI:2386340 NCBI chrNW_004936661:2,919,444...2,945,847
Ensembl chrNW_004936661:2,919,550...2,945,599
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (MGI:2674169|PMID:12941696) MGI PMID:12941696 MGI:2674169 NCBI chrNW_004936480:11,082,811...11,156,691
Ensembl chrNW_004936480:11,083,605...11,156,691
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (MGI:3607216|PMID:16145668) MGI PMID:16145668 MGI:3607216 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Mstn myostatin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2676508|PMID:12595574) MGI
Ensembl
PMID:12595574 GO_REF:0000107 MGI:2676508 NCBI chrNW_004936506:7,988,879...7,996,260
Ensembl chrNW_004936506:7,988,718...7,996,971
JBrowse link
G Ndp norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (MGI:6155267|PMID:29715368) MGI PMID:29715368 MGI:6155267 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328
JBrowse link
G Nlk nemo like kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,321,018...4,466,175
Ensembl chrNW_004936538:4,320,907...4,466,168
JBrowse link
G Npnt nephronectin acts_upstream_of
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chrNW_004936814:1,096,604...1,165,755
Ensembl chrNW_004936814:1,095,974...1,165,866
JBrowse link
G Nrros negative regulator of reactive oxygen species involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,222,381...1,250,501
Ensembl chrNW_004936784:1,222,042...1,250,565
JBrowse link
G Onecut1 one cut homeobox 1 involved_in IEA Ensembl GO_REF:0000107
G Onecut2 one cut homeobox 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:3588024|PMID:16103213) MGI
Ensembl
PMID:16103213 GO_REF:0000107 MGI:3588024 NCBI chrNW_004936497:6,853,739...6,896,408
Ensembl chrNW_004936497:6,854,238...6,895,660
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Pias2 protein inhibitor of activated STAT 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chrNW_004936517:72,676...152,926
Ensembl chrNW_004936517:82,332...144,586
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054278|PMID:15356634) MGI
Ensembl
PMID:15356634 GO_REF:0000107 MGI:3054278 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:24036928) UniProt PMID:24036928 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543
JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K involved_in