Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:cell-matrix adhesion
go back to main search page
Accession:GO:0007160 term browser browse the term
Definition:The binding of a cell to the extracellular matrix via adhesion molecules.


show annotations for term's descendants       view all columns           Sort by:
 
cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam9 ADAM metallopeptidase domain 9 JBrowse link 16 71,810,377 71,887,926 RGD:1624291
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 JBrowse link 2 61,039,072 61,340,687 RGD:1624291
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:1624291
G Angptl3 angiopoietin-like 3 JBrowse link 5 117,698,590 117,706,729 RGD:1624291
G Bcam basal cell adhesion molecule (Lutheran blood group) JBrowse link 1 80,674,463 80,689,122 RGD:1624291
G Bcan brevican JBrowse link 2 187,359,674 187,373,133 RGD:14392798
G Bcl2l11 BCL2 like 11 JBrowse link 3 120,726,906 120,764,192 RGD:1624291
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:1624291
G Cd34 CD34 molecule JBrowse link 13 113,691,842 113,711,259 RGD:13792537
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,583 RGD:1600115
RGD:1624291
G Cd96 CD96 molecule JBrowse link 11 57,108,757 57,183,855 RGD:1624291
RGD:13792537
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1624291
G Cntn2 contactin 2 JBrowse link 13 49,280,913 49,314,061 RGD:727707
G Col13a1 collagen type XIII alpha 1 chain JBrowse link 20 31,456,502 31,598,360 RGD:1624291
RGD:13792537
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:1624291
G Col5a3 collagen type V alpha 3 chain JBrowse link 8 21,786,324 21,831,751 RGD:1624291
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Eda ectodysplasin-A JBrowse link X 69,730,123 70,222,693 RGD:1624291
G Emilin1 elastin microfibril interfacer 1 JBrowse link 6 26,821,249 26,829,013 RGD:1624291
G Emp2 epithelial membrane protein 2 JBrowse link 10 5,433,248 5,467,840 RGD:1624291
RGD:1600115
G Epdr1 ependymin related 1 JBrowse link 17 47,397,558 47,422,183 RGD:1600115
G Fermt1 fermitin family member 1 JBrowse link 3 125,566,744 125,607,864 RGD:13792537
G Fermt2 fermitin family member 2 JBrowse link 15 19,807,806 19,876,557 RGD:1624291
RGD:13792537
G Fermt3 fermitin family member 3 JBrowse link 1 222,254,183 222,272,775 RGD:13792537
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:1624291
RGD:1600115
G Fgb fibrinogen beta chain JBrowse link 2 182,028,044 182,035,026 RGD:1624291
RGD:13792537
G Fgg fibrinogen gamma chain JBrowse link 2 181,987,080 181,994,523 RGD:1624291
RGD:13792537
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:1358623
RGD:13792537
RGD:1624291
G Frem1 Fras1 related extracellular matrix 1 JBrowse link 5 101,018,009 101,166,794 RGD:1624291
G Gp5 glycoprotein V (platelet) JBrowse link 11 73,015,380 73,017,570 RGD:1624291
G Hoxd3 homeo box D3 JBrowse link 3 61,650,569 61,670,285 RGD:1600115
RGD:1624291
G Hpse heparanase JBrowse link 14 10,534,358 10,576,686 RGD:1600115
RGD:13792537
RGD:1624291
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:13792537
G Itga1 integrin subunit alpha 1 JBrowse link 2 47,127,403 47,281,387 RGD:1624291
G Itga10 integrin subunit alpha 10 JBrowse link 2 198,772,937 198,792,253 RGD:1624291
G Itga11 integrin subunit alpha 11 JBrowse link 8 67,566,874 67,683,973 RGD:1624291
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:1624291
G Itga2b integrin subunit alpha 2b JBrowse link 10 90,397,960 90,416,550 RGD:1624291
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:1624291
G Itga6 integrin subunit alpha 6 JBrowse link 3 58,442,904 58,515,124 RGD:1624291
G Itga8 integrin subunit alpha 8 JBrowse link 17 79,321,893 79,676,927 RGD:1624291
G Itgal integrin subunit alpha L JBrowse link 1 198,744,053 198,781,745 RGD:1624291
G Itgav integrin subunit alpha V JBrowse link 3 71,113,269 71,205,958 RGD:1624291
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1624291
RGD:13792537
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:1624291
RGD:13792537
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
G Itgb4 integrin subunit beta 4 JBrowse link 10 104,524,000 104,560,180 RGD:1600115
RGD:13792537
RGD:1624291
G Itgb5 integrin subunit beta 5 JBrowse link 11 70,056,500 70,172,164 RGD:1624291
G Itgb6 integrin subunit beta 6 JBrowse link 3 46,652,624 46,775,362 RGD:13792537
G Itgb7 integrin subunit beta 7 JBrowse link 7 143,820,236 143,837,802 RGD:1624291
RGD:13792537
G Itgb8 integrin subunit beta 8 JBrowse link 6 147,089,280 147,172,846 RGD:1624291
G Itgbl1 integrin subunit beta like 1 JBrowse link 15 110,114,148 110,378,970 RGD:13792537
G Jam3 junctional adhesion molecule 3 JBrowse link 8 28,147,110 28,208,466 RGD:1624291
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:1600115
RGD:1624291
G Lims1 LIM zinc finger domain containing 1 JBrowse link 20 27,895,981 28,004,767 RGD:1624291
G Lypd3 Ly6/Plaur domain containing 3 JBrowse link 1 81,499,856 81,504,306 RGD:8553808
RGD:13792537
G Lypd5 Ly6/Plaur domain containing 5 JBrowse link 1 81,202,832 81,213,928 RGD:13792537
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 JBrowse link 7 12,918,352 12,922,509 RGD:1624291
G Mia MIA SH3 domain containing JBrowse link 1 83,991,577 83,993,270 RGD:1624291
G Mkln1 muskelin 1 JBrowse link 4 58,693,384 58,817,924 RGD:1600115
RGD:1624291
G Msln mesothelin JBrowse link 10 15,119,700 15,129,129 RGD:13792537
G Mslnl mesothelin-like JBrowse link 10 15,103,047 15,119,427 RGD:13792537
G Muc4 mucin 4, cell surface associated JBrowse link 11 71,242,973 71,285,217 RGD:1600115
G Nid1 nidogen 1 JBrowse link 17 90,553,161 90,627,133 RGD:1624291
RGD:1600115
G Nid2 nidogen 2 JBrowse link 15 4,893,999 4,951,893 RGD:1624291
RGD:1600115
G Npnt nephronectin JBrowse link 2 238,001,767 238,068,886 RGD:1624291
RGD:1600115
G Otoa otoancorin JBrowse link 1 191,029,861 191,097,524 RGD:1624291
RGD:13792537
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
G Sirpa signal-regulatory protein alpha JBrowse link 3 122,113,735 122,152,478 RGD:1624291
RGD:1600115
G Sned1 sushi, nidogen and EGF-like domains 1 JBrowse link 9 100,380,487 100,439,125 RGD:1600115
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G Strc stereocilin JBrowse link 3 113,324,403 113,343,513 RGD:13792537
G Tecta tectorin alpha JBrowse link 8 46,603,728 46,675,658 RGD:1600115
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:1624291
G Tiam1 TIAM Rac1 associated GEF 1 JBrowse link 11 29,931,083 30,061,173 RGD:1624291
G Tmem8b transmembrane protein 8B JBrowse link 5 59,165,552 59,193,772 RGD:1624291
G Tnn tenascin N JBrowse link 13 77,829,384 77,896,831 RGD:1624291
RGD:13792537
G Tnxb tenascin XB RGD:1624291
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1624291
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:1624291
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:1624291
G Zyx zyxin JBrowse link 4 71,740,188 71,749,386 RGD:1624291
calcium-dependent cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:2314895
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:1624291
RGD:1600115
calcium-independent cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:1624291
RGD:1600115
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1624291
RGD:1600115
G Vwa2 von Willebrand factor A domain containing 2 JBrowse link 1 277,689,478 277,730,407 RGD:1624291
RGD:13792537
cell-matrix adhesion involved in ameboidal cell migration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:1624291
G Itgb7 integrin subunit beta 7 JBrowse link 7 143,820,236 143,837,802 RGD:1624291
endothelial cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 JBrowse link 4 124,660,254 124,860,997 RGD:1624291
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:1624291
focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:1600115
RGD:1624291
G Actn2 actinin alpha 2 JBrowse link 17 66,304,530 66,397,647 RGD:1624291
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
G Ajuba ajuba LIM protein JBrowse link 15 33,208,210 33,218,456 RGD:1624291
G Arhgap6 Rho GTPase activating protein 6 JBrowse link X 26,314,561 26,845,242 RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Bcr BCR activator of RhoGEF and GTPase JBrowse link 20 14,421,250 14,546,406 RGD:1624291
G Coro2b coronin 2B JBrowse link 8 67,374,617 67,492,490 RGD:1624291
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:10047281
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1624291
G Fermt2 fermitin family member 2 JBrowse link 15 19,807,806 19,876,557 RGD:1624291
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:8693310
G Pdpk1 3-phosphoinositide dependent protein kinase-1 JBrowse link 10 13,446,373 13,525,248 RGD:1581775
G Peak1 pseudopodium-enriched atypical kinase 1 JBrowse link 8 60,861,742 61,080,128 RGD:1624291
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha JBrowse link 2 196,227,669 196,270,949 RGD:1624291
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1581775
G Ptprk protein tyrosine phosphatase, receptor type, K JBrowse link 1 17,445,052 18,058,266 RGD:1624291
G Pxn paxillin JBrowse link 12 46,797,953 46,845,107 RGD:1624291
G Rcc2 regulator of chromosome condensation 2 JBrowse link 5 159,220,531 159,236,313 RGD:1624291
G Rhod ras homolog family member D JBrowse link 1 219,668,352 219,682,287 RGD:1624291
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
RGD:1600115
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1624291
G Ston1 stonin 1 JBrowse link 6 12,332,465 12,379,783 RGD:1624291
G Taok2 TAO kinase 2 JBrowse link 1 198,301,789 198,354,601 RGD:1600115
RGD:1624291
G Tesk2 testis associated actin remodelling kinase 2 JBrowse link 5 135,574,172 135,659,842 RGD:727318
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:8553684
RGD:13792537
G Whamm WASP homolog associated with actin, golgi membranes and microtubules JBrowse link 1 143,401,986 143,430,356 RGD:1624291
mesangial cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl21 C-C motif chemokine ligand 21 JBrowse link 5 58,197,678 58,198,782 RGD:1624291
G Cd34 CD34 molecule JBrowse link 13 113,691,842 113,711,259 RGD:8553277
negative regulation of cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acer2 alkaline ceramidase 2 JBrowse link 5 105,230,540 105,279,732 RGD:1624291
G Adam15 ADAM metallopeptidase domain 15 JBrowse link 2 188,661,831 188,672,337 RGD:1624291
G Ajap1 adherens junctions associated protein 1 JBrowse link 5 170,615,885 170,679,315 RGD:1600115
RGD:1624291
G Bcl6 BCL6, transcription repressor JBrowse link 11 80,255,790 80,279,075 RGD:1624291
G Cask calcium/calmodulin dependent serine protein kinase JBrowse link X 9,815,652 10,156,155 RGD:1624291
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:1624291
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 JBrowse link 7 94,479,931 94,563,086 RGD:1299196
G Hoxa7 homeobox A7 JBrowse link 4 82,184,299 82,187,890 RGD:1624291
G Jag1 jagged canonical Notch ligand 1 JBrowse link 3 130,079,361 130,114,781 RGD:1600115
RGD:1624291
G Muc4 mucin 4, cell surface associated JBrowse link 11 71,242,973 71,285,217 RGD:2303753
G Myoc myocilin JBrowse link 13 80,517,531 80,527,928 RGD:1600115
RGD:1624291
G Nexmif neurite extension and migration factor JBrowse link X 74,943,440 75,053,559 RGD:13442493
RGD:13792537
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1624291
RGD:1600115
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:1624291
RGD:1600115
G Plet1 placenta expressed transcript 1 JBrowse link 8 54,925,624 54,937,068 RGD:1624291
RGD:13792537
RGD:1600115
G Postn periostin JBrowse link 2 143,656,820 143,688,087 RGD:10040999
G Rasa1 RAS p21 protein activator 1 JBrowse link 2 13,617,021 13,696,531 RGD:1600115
RGD:1624291
G Sema3e semaphorin 3E JBrowse link 4 17,314,745 17,594,659 RGD:1624291
G Thbs1 thrombospondin 1 JBrowse link 3 109,862,120 109,873,466 RGD:1624291
negative regulation of endothelial cell-matrix adhesion via fibronectin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mmp12 matrix metallopeptidase 12 JBrowse link 8 5,594,717 5,616,494 RGD:1600115
RGD:1624291
negative regulation of focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvrl1 activin A receptor like type 1 JBrowse link 7 142,769,942 142,787,336 RGD:1624291
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:1600115
RGD:1624291
G Arhgap6 Rho GTPase activating protein 6 JBrowse link X 26,314,561 26,845,242 RGD:1624291
G Bcas3 BCAS3, microtubule associated cell migration factor JBrowse link 10 72,756,548 73,271,851 RGD:1624291
G Clasp2 cytoplasmic linker associated protein 2 JBrowse link 8 122,003,719 122,185,495 RGD:1624291
G Coro1c coronin 1C JBrowse link 12 48,481,741 48,554,054 RGD:1624291
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1600115
RGD:1624291
G Dmtn dematin actin binding protein JBrowse link 15 52,292,762 52,320,385 RGD:1624291
G Dusp22 dual specificity phosphatase 22 JBrowse link 17 34,986,589 35,037,297 RGD:1624291
G Fam107a family with sequence similarity 107, member A JBrowse link 15 18,399,145 18,415,959 RGD:1600115
RGD:1624291
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800550
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:1582604
G Phldb2 pleckstrin homology-like domain, family B, member 2 JBrowse link 11 60,042,879 60,051,229 RGD:1624291
RGD:1600115
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
G Rcc2 regulator of chromosome condensation 2 JBrowse link 5 159,220,531 159,236,313 RGD:1624291
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:7248703
negative regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:1600115
RGD:1624291
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:1624291
RGD:1600115
positive regulation of cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl21 C-C motif chemokine ligand 21 JBrowse link 5 58,197,678 58,198,782 RGD:1624291
G Ccl25 C-C motif chemokine ligand 25 JBrowse link 12 2,429,492 2,438,928 RGD:1624291
G Ccl28 C-C motif chemokine ligand 28 JBrowse link 2 52,379,341 52,403,979 RGD:1624291
RGD:13792537
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Cd3e CD3e molecule JBrowse link 8 49,297,604 49,309,370 RGD:1624291
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:1624291
G Cdk6 cyclin-dependent kinase 6 JBrowse link 4 27,781,728 27,969,653 RGD:1624291
G Cib1 calcium and integrin binding 1 JBrowse link 1 142,014,962 142,020,461 RGD:1624291
RGD:1600115
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:1624291
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:11541058
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:5509803
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:1624291
G Emp2 epithelial membrane protein 2 JBrowse link 10 5,433,248 5,467,840 RGD:1624291
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 13 35,622,472 35,673,449 RGD:1624291
G Epha1 Eph receptor A1 JBrowse link 4 71,749,100 71,763,681 RGD:1624291
G Fermt1 fermitin family member 1 JBrowse link 3 125,566,744 125,607,864 RGD:1624291
G Fut1 fucosyltransferase 1 JBrowse link 1 101,599,018 101,602,440 RGD:1600115
RGD:1624291
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1624291
RGD:1600115
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:2301740
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
G Jup junction plakoglobin JBrowse link 10 88,280,517 88,307,451 RGD:1624291
G Ninj1 ninjurin 1 JBrowse link 17 15,866,235 15,881,284 RGD:1624291
G Plekha2 pleckstrin homology domain containing A2 JBrowse link 16 71,725,649 71,784,432 RGD:1624291
G Prkcz protein kinase C, zeta JBrowse link 5 172,658,071 172,769,492 RGD:1642674
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
RGD:1600115
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:1624291
G Skap1 src kinase associated phosphoprotein 1 JBrowse link 10 84,309,379 84,619,051 RGD:1624291
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 8 119,215,266 119,220,909 RGD:1624291
G Utrn utrophin JBrowse link 1 6,451,809 6,970,040 RGD:1624291
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:1624291
positive regulation of endothelial cell-matrix adhesion via fibronectin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ceacam6 CEA cell adhesion molecule 6 JBrowse link 1 81,683,500 81,701,230 RGD:1624291
G Fut1 fucosyltransferase 1 JBrowse link 1 101,599,018 101,602,440 RGD:1624291
RGD:1600115
G Gfus GDP-L-fucose synthase JBrowse link 7 116,958,427 116,963,281 RGD:1624291
G Rin2 Ras and Rab interactor 2 JBrowse link 3 139,871,330 140,087,679 RGD:1624291
G Rras RAS related JBrowse link 1 101,012,822 101,016,720 RGD:1624291
positive regulation of focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:1624291
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:11570550
G Col16a1 collagen type XVI alpha 1 chain JBrowse link 5 148,257,030 148,311,645 RGD:1624291
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 JBrowse link 7 94,479,931 94,563,086 RGD:9685417
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 13 35,622,472 35,673,449 RGD:1624291
G Fmn1 formin 1 JBrowse link 3 104,783,093 105,170,761 RGD:1624291
RGD:1600115
G Hrg histidine-rich glycoprotein JBrowse link 11 81,621,274 81,639,938 RGD:1600115
RGD:1624291
G Iqgap1 IQ motif containing GTPase activating protein 1 JBrowse link 1 142,525,041 142,615,673 RGD:11049552
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:1624291
RGD:1600115
G Lims1 LIM zinc finger domain containing 1 JBrowse link 20 27,895,981 28,004,767 RGD:1624291
G LOC681544 similar to histidine-rich glycoprotein RGD:1600115
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 JBrowse link 9 46,657,444 46,782,545 RGD:1624291
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:12798522
G Myoc myocilin JBrowse link 13 80,517,531 80,527,928 RGD:1600115
RGD:1624291
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F JBrowse link 11 88,313,709 88,343,726 RGD:1624291
RGD:1600115
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:1624291
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1600115
RGD:1624291
G S100a10 S100 calcium binding protein A10 JBrowse link 2 193,892,589 193,901,236 RGD:1624291
G Sdc4 syndecan 4 JBrowse link 3 160,872,503 160,891,190 RGD:2312327
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:2300418
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:1624291
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:1624291
RGD:12793016
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1624291
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291
RGD:1600115
G Wnt4 Wnt family member 4 JBrowse link 5 155,649,238 155,668,065 RGD:1624291
RGD:1600115
positive regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 1 236,031,988 236,313,858 RGD:11556214
regulation of cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Bst1 bone marrow stromal cell antigen 1 JBrowse link 14 71,798,218 71,814,540 RGD:1600115
RGD:1624291
G Ddr1 discoidin domain receptor tyrosine kinase 1 JBrowse link 20 3,553,430 3,574,959 RGD:1624291
RGD:1600115
G Emp2 epithelial membrane protein 2 JBrowse link 10 5,433,248 5,467,840 RGD:1624291
RGD:13792537
G Mink1 misshapen-like kinase 1 JBrowse link 10 57,185,310 57,238,531 RGD:1600115
RGD:1624291
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:1624291
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1624291
RGD:1600115
G Onecut1 one cut homeobox 1 JBrowse link 8 81,765,779 81,799,894 RGD:1624291
RGD:1600115
G Onecut2 one cut homeobox 2 JBrowse link 18 59,830,375 59,882,490 RGD:1624291
RGD:1600115
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta JBrowse link 8 107,275,849 107,381,088 RGD:1624291
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:1624291
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1624291
regulation of focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actg1 actin, gamma 1 JBrowse link 10 109,518,429 109,521,288 RGD:1624291
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 JBrowse link 12 2,133,935 2,157,403 RGD:1624291
G Clasp1 cytoplasmic linker associated protein 1 JBrowse link 13 34,365,038 34,584,651 RGD:1624291
G Coro1c coronin 1C JBrowse link 12 48,481,741 48,554,054 RGD:1624291
G Dapk3 death-associated protein kinase 3 JBrowse link 7 11,392,436 11,400,855 RGD:1624291
G Dusp3 dual specificity phosphatase 3 JBrowse link 10 89,904,578 89,918,296 RGD:1624291
G Efna5 ephrin A5 JBrowse link 9 110,054,002 110,329,878 RGD:1624291
RGD:1600115
G Epha3 Eph receptor A3 JBrowse link 11 421,253 783,037 RGD:1600115
RGD:1624291
G Gpm6b glycoprotein m6b JBrowse link X 29,604,607 29,751,174 RGD:1600115
RGD:1624291
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:1624291
G Ldb1 LIM domain binding 1 JBrowse link 1 265,772,729 265,798,442 RGD:1624291
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:1624291
RGD:13792537
G LOC680875 similar to dystonin isoform 1 JBrowse link 7 117,180,653 117,187,739 RGD:13792537
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 5 141,039,455 141,363,524 RGD:1600115
RGD:13792537
RGD:1624291
G Peak1 pseudopodium-enriched atypical kinase 1 JBrowse link 8 60,861,742 61,080,128 RGD:1624291
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:1600115
RGD:1624291
G Rhod ras homolog family member D JBrowse link 1 219,668,352 219,682,287 RGD:1624291
G Slk STE20-like kinase JBrowse link 1 267,359,761 267,415,735 RGD:1600115
RGD:1624291
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1601406
G Vcl vinculin JBrowse link 15 3,455,211 3,544,738 RGD:1624291
RGD:1600115
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link 14 106,393,959 106,759,511 RGD:1624291
RGD:1600115
regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:1624291
RGD:1600115
smooth muscle cell-matrix adhesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddr1 discoidin domain receptor tyrosine kinase 1 JBrowse link 20 3,553,430 3,574,959 RGD:1600115
RGD:1624291
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:1624291
synaptic membrane adhesion to extracellular matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    biological adhesion 1376
      cell adhesion 1364
        cell-substrate adhesion 362
          cell-matrix adhesion 218
            calcium-dependent cell-matrix adhesion 2
            calcium-independent cell-matrix adhesion 3
            cell-matrix adhesion involved in ameboidal cell migration + 2
            endothelial cell-matrix adhesion + 8
            focal adhesion assembly + 83
            mesangial cell-matrix adhesion 2
            negative regulation of cell-matrix adhesion + 38
            positive regulation of cell-matrix adhesion + 61
            regulation of cell-matrix adhesion + 124
            smooth muscle cell-matrix adhesion + 6
            synaptic membrane adhesion to extracellular matrix 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.