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ONTOLOGY REPORT - ANNOTATIONS


Term:reciprocal meiotic recombination
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Accession:GO:0007131 term browser browse the term
Definition:The cell cycle process in which double strand breaks are formed and repaired through a single or double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.
Synonyms:exact_synonym: gene conversion with reciprocal crossover
 narrow_synonym: female meiotic recombination
 alt_id: GO:0000021;   GO:0007145



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reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (MGI:6447091|PMID:32345962) RGD PMID:32345962 MGI:6447091 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850
JBrowse link
G C14h1orf146 similar to human chromosome 1 open reading frame 146 involved_in ISO
IBA
(MGI:6478065|PMID:30746471)
GO_REF:0000033
RGD
GO_Central
PMID:30746471 GO_REF:0000033 MGI:6478065 NCBI chr14:2,230,404...2,250,420
Ensembl chr14:2,231,451...2,270,782
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 involved_in ISO
IBA
(MGI:5545848|PMID:24390283)
GO_REF:0000033
RGD
GO_Central
PMID:24390283 GO_REF:0000033 MGI:5545848 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475
JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO MGI:4377328 (MGI:5662131|PMID:26158450) RGD PMID:26158450 MGI:5662131 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177
JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 acts_upstream_of_or_within ISO MGI:2177588 (MGI:5470363|PMID:23133398) RGD PMID:23133398 MGI:5470363 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050
JBrowse link
G Cntd1 cyclin N-terminal domain containing 1 acts_upstream_of_or_within ISO MGI:4363686 (MGI:5606256|PMID:24891606) RGD PMID:24891606 MGI:5606256 NCBI chr10:86,221,430...86,231,812 JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO
IBA
(PMID:21307306)
GO_REF:0000033
(MGI:7366887|PMID:17639081)
RGD
GO_Central
PMID:17639081 PMID:21307306 GO_REF:0000033 MGI:7366887 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:67,245,414...67,261,222
Ensembl chr  X:67,245,414...67,280,756
JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275
JBrowse link
G Fsbp fibrinogen silencer binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:25,058,003...25,064,276
Ensembl chr 5:25,032,066...25,104,616
JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:1857946 (MGI:1340178|PMID:10385520), (MGI:3612347|PMID:16307920), (MGI:81751|PMID:8673133) RGD PMID:8673133 PMID:10385520 PMID:16307920 MGI:1340178 MGI:3612347 MGI:81751 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
G Mnd1 meiotic nuclear divisions 1 involved_in ISO
IBA
(PMID:16407260)
GO_REF:0000033
RGD
GO_Central
PMID:16407260 GO_REF:0000033 NCBI chr 2:169,433,523...169,496,081
Ensembl chr 2:169,433,540...169,496,096
JBrowse link
G Msh4 mutS homolog 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487
JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in ISO (PMID:16407260) RGD PMID:16407260 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423
JBrowse link
G Rad50 RAD50 double strand break repair protein TAS RGD PMID:10908350 RGD:68816 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IBA
(MGI:7366889|PMID:15834424)
GO_REF:0000033
RGD
GO_Central
PMID:15834424 GO_REF:0000033 MGI:7366889 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rad51c RAD51 paralog C acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3707422|MGI:3707425 (MGI:3703317|PMID:17312021)
GO_REF:0000033
RGD
GO_Central
PMID:17312021 GO_REF:0000033 MGI:3703317 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248
JBrowse link
G Rad51d RAD51 paralog D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Rad54b RAD54 homolog B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:25,032,112...25,104,630
Ensembl chr 5:25,032,066...25,104,616
JBrowse link
G Rad54l RAD54 like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070
JBrowse link
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,740,711...67,803,669
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (MGI:5487470|PMID:23396135), (MGI:5545848|PMID:24390283) RGD PMID:23396135 PMID:24390283 MGI:5487470 MGI:5545848 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831
JBrowse link
G Rnf212b ring finger protein 212B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:28,274,629...28,321,093
Ensembl chr15:28,244,083...28,321,347
JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO (MGI:6272683|PMID:30272023) RGD PMID:30272023 MGI:6272683 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2178805 (MGI:3612347|PMID:16307920)
GO_REF:0000033
RGD
GO_Central
PMID:16307920 GO_REF:0000033 MGI:3612347 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
JBrowse link
G Syce3 synaptonemal complex central element protein 3 involved_in ISO
IBA
(MGI:5008660|PMID:21637789)
GO_REF:0000033
RGD
GO_Central
PMID:21637789 GO_REF:0000033 MGI:5008660 NCBI chr 7:120,456,800...120,482,882
Ensembl chr 7:120,456,800...120,482,973
JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3579731|PMID:15937223)
UniProt
RGD
PMID:15937223 GO_REF:0000024 MGI:3579731 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
JBrowse link
G Tex11 testis expressed 11 involved_in ISO
IBA
(MGI:3797180|PMID:18369460)
GO_REF:0000033
RGD
GO_Central
PMID:18369460 GO_REF:0000033 MGI:3797180 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187
JBrowse link
G Tex19.1 testis expressed 19.1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:106,420,245...106,422,452
Ensembl chr10:106,420,139...106,422,425
JBrowse link
G Top6bl TOP6B like initiator of meiotic double strand breaks involved_in ISO
IBA
(MGI:5752405|PMID:26917764)
GO_REF:0000033
RGD
GO_Central
PMID:26917764 GO_REF:0000033 MGI:5752405 NCBI chr 1:201,902,564...201,989,945 JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(MGI:4821667|PMID:20711356)
MGI:3719273 (MGI:3719060|PMID:17696610)
UniProt
GO_Central
RGD
PMID:17696610 PMID:20711356 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 MGI:3719060 MGI:4821667 NCBI chr 1:29,357,093...29,402,078
Ensembl chr 1:29,357,130...29,402,074
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (MGI:5908463|PMID:28708824) RGD PMID:28708824 MGI:5908463 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139
JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:5700253 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in
ISO MGI:3050548 (MGI:3757893|PMID:17784788)
(MGI:5545848|PMID:24390283)
RGD PMID:17784788 PMID:24390283 MGI:3757893 MGI:5545848 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475
JBrowse link
G Msh5 mutS homolog 5 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336
JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (MGI:5545848|PMID:24390283) RGD PMID:24390283 MGI:5545848 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831
JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:109542 (MGI:5315075|PMID:22164254)
GO_REF:0000033
GO_REF:0000118
Ensembl
RGD
GO_Central
TreeGrafter
PMID:22164254 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5315075 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
JBrowse link
G Sycp3 synaptonemal complex protein 3 involved_in
acts_upstream_of_or_within
ISO (MGI:2179610|PMID:12004129)
MGI:105931 (MGI:5315075|PMID:22164254)
RGD PMID:12004129 PMID:22164254 MGI:2179610 MGI:5315075 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:3774244 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:2450033|PMID:12556476) RGD PMID:12556476 MGI:2450033 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:4129733 (MGI:5700253|PMID:26490168)
GO_REF:0000033
RGD
GO_Central
PMID:26490168 GO_REF:0000033 MGI:5700253 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6448646|PMID:32460033) RGD PMID:32345962 PMID:32460033 PMID:32463460 MGI:6443349 MGI:6447091 MGI:6448646 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850
JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (MGI:7366887|PMID:17639081) RGD PMID:17639081 MGI:7366887 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in ISO (MGI:6283956|PMID:30760716), (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6456264|PMID:31242413) RGD PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 MGI:6283956 MGI:6443349 MGI:6447091 MGI:6456264 NCBI chr20:10,035,562...10,123,059
Ensembl chr20:10,035,562...10,121,242
JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within ISO MGI:1921651 (MGI:6277530|PMID:30718482) RGD PMID:30718482 MGI:6277530 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092
JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:1349669|MGI:2178050|MGI:5511194 (MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:5805564 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
JBrowse link
G Morc2b microrchidia 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:12,314,341...12,318,421
Ensembl chr 7:12,314,349...12,318,421
JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:6102131|PMID:25894966), (MGI:6114980|PMID:29478809)
UniProt
RGD
PMID:25894966 PMID:29478809 GO_REF:0000024 MGI:6102131 MGI:6114980 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (MGI:7366889|PMID:15834424) RGD PMID:15834424 MGI:7366889 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:3045334 (MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:5805564 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within ISO MGI:1921651 (MGI:6277530|PMID:30718482) RGD PMID:30718482 MGI:6277530 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084
JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (MGI:6277530|PMID:30718482) RGD PMID:30718482 MGI:6277530 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683
JBrowse link
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) RGD PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chr 2:28,079,187...28,241,722
Ensembl chr 2:28,092,882...28,241,719
JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:5700253 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in ISO
IBA
(MGI:5822939|PMID:27796301)
GO_REF:0000033
RGD
GO_Central
PMID:27796301 GO_REF:0000033 MGI:5822939 NCBI chr 6:91,579,185...91,615,183
Ensembl chr 6:91,579,325...91,615,148
JBrowse link
meiotic DNA recombinase assembly involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Swi5 SWI5 homologous recombination repair protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805
JBrowse link
meiotic joint molecule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3ip PSMC3 interacting protein involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423
JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805
JBrowse link
meiotic strand invasion involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3ip PSMC3 interacting protein involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423
JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102555644 zinc finger protein 182-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:62,435,503...62,457,346
Ensembl chr 1:62,435,510...62,457,961
JBrowse link
G Prdm9 PR/SET domain 9 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:4452589|PMID:20044538), (MGI:5306625|PMID:22028627)
GO_REF:0000033
(PMID:21750151)
RGD
GO_Central
PMID:20044538 PMID:21750151 PMID:22028627 GO_REF:0000033 MGI:4452589 MGI:5306625 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996711) RGD PMID:17996711 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:2450033|PMID:12556476) RGD PMID:12556476 MGI:2450033 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Zfp141 zinc finger protein 141 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:93,130,574...93,164,293
Ensembl chr 1:93,130,598...93,163,404
JBrowse link
G Zfp40 zinc finger protein 40 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:62,962,456...62,985,007
Ensembl chr 1:62,962,456...62,985,006
JBrowse link
G Zfp689 zinc finger protein 689 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:182,065,885...182,074,343
Ensembl chr 1:182,065,826...182,076,679
JBrowse link
G Zkscan4 zinc finger with KRAB and SCAN domains 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:43,104,853...43,113,101
Ensembl chr17:43,106,370...43,113,183
JBrowse link
resolution of meiotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,586,718...79,595,515
Ensembl chr10:79,586,729...79,595,435
JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369
JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174
JBrowse link
G Fancm FA complementation group M involved_in ISO (PMID:20347428) RGD PMID:20347428 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028
JBrowse link
G Hfm1 helicase for meiosis 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5477835|PMID:23555294)
GO_REF:0000033
RGD
GO_Central
PMID:23555294 GO_REF:0000033 MGI:5477835 NCBI chr14:2,857,251...2,943,766
Ensembl chr14:2,856,599...2,939,238
JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(MGI:5527015|PMID:24068956), (MGI:5538413|PMID:24240703)
UniProt
GO_Central
TreeGrafter
RGD
PMID:24068956 PMID:24240703 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5527015 MGI:5538413 NCBI chr10:13,833,170...13,865,684
Ensembl chr10:13,833,750...13,865,046
JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857946 (MGI:1340178|PMID:10385520), (MGI:2386157|PMID:12217320)
GO_REF:0000107
RGD
Ensembl
PMID:10385520 PMID:12217320 GO_REF:0000107 MGI:1340178 MGI:2386157 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843
JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,256,533...6,264,523
Ensembl chr17:6,256,450...6,264,695
JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO (MGI:6159552|PMID:29742103) RGD PMID:29742103 MGI:6159552 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295
JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:3774244 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Top2b DNA topoisomerase II beta involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20295
    reproductive process 1860
      meiotic cell cycle process 256
        reciprocal meiotic recombination 69
          chiasma assembly 8
          double-strand break repair involved in meiotic recombination 13
          meiotic DNA double-strand break formation involved in reciprocal meiotic recombination + 1
          meiotic DNA double-strand break processing involved in reciprocal meiotic recombination 2
          meiotic DNA recombinase assembly involved in reciprocal meiotic recombination 1
          meiotic DNA repair synthesis involved in reciprocal meiotic recombination 0
          meiotic joint molecule formation + 2
          meiotic mismatch repair involved in reciprocal meiotic recombination 0
          meiotic strand invasion involved in reciprocal meiotic recombination 1
          negative regulation of reciprocal meiotic recombination 0
          positive regulation of reciprocal meiotic recombination + 8
          regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination + 0
          regulation of reciprocal meiotic recombination + 8
          resolution of meiotic recombination intermediates 18
Path 2
Term Annotations click to browse term
  biological_process 20295
    cellular process 18772
      cellular metabolic process 10283
        heterocycle metabolic process 5873
          nucleobase-containing compound metabolic process 5702
            nucleic acid metabolic process 5109
              DNA metabolic process 984
                DNA recombination 355
                  homologous recombination 70
                    reciprocal homologous recombination 69
                      reciprocal meiotic recombination 69
                        chiasma assembly 8
                        double-strand break repair involved in meiotic recombination 13
                        meiotic DNA double-strand break formation involved in reciprocal meiotic recombination + 1
                        meiotic DNA double-strand break processing involved in reciprocal meiotic recombination 2
                        meiotic DNA recombinase assembly involved in reciprocal meiotic recombination 1
                        meiotic DNA repair synthesis involved in reciprocal meiotic recombination 0
                        meiotic joint molecule formation + 2
                        meiotic mismatch repair involved in reciprocal meiotic recombination 0
                        meiotic strand invasion involved in reciprocal meiotic recombination 1
                        negative regulation of reciprocal meiotic recombination 0
                        positive regulation of reciprocal meiotic recombination + 8
                        regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination + 0
                        regulation of reciprocal meiotic recombination + 8
                        resolution of meiotic recombination intermediates 18
paths to the root