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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of sister chromatid cohesion
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Accession:GO:0007063 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of sister chromatid cohesion.


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regulation of sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase involved_in ISO (PMID:15723797) RGD PMID:15723797 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naa10 N(alpha)-acetyltransferase 10, NatA catalytic subunit involved_in ISO (PMID:27422821) RGD PMID:27422821 NCBI chr  X:156,863,655...156,868,950
Ensembl chr  X:156,863,754...156,868,950
JBrowse link
negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler involved_in ISO
IEA
(PMID:26373281)
GO_REF:0000107
RGD
Ensembl
PMID:26373281 GO_REF:0000107 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Tnks tankyrase involved_in ISO (PMID:26373281) RGD PMID:26373281 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
negative regulation of sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Recql4 RecQ like helicase 4 acts_upstream_of_or_within ISO MGI:3045113 (MGI:3574257|PMID:15703196) RGD PMID:15703196 MGI:3574257 NCBI chr 7:117,765,892...117,773,128
Ensembl chr 7:117,763,783...117,773,134
JBrowse link
G Wapl WAPL cohesin release factor involved_in ISO (PMID:17113138), (PMID:19696148), (PMID:21111234) RGD PMID:17113138 PMID:19696148 PMID:21111234 NCBI chr16:11,029,325...11,108,867
Ensembl chr16:11,032,531...11,106,589
JBrowse link
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgo2 shugoshin 2 acts_upstream_of_or_within ISO MGI:3809644 (MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:3806388 NCBI chr 9:64,898,380...64,923,023
Ensembl chr 9:64,898,459...64,923,012
JBrowse link
positive regulation of maintenance of mitotic sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone involved_in ISO (PMID:26373281) RGD PMID:26373281 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
ISS
(PMID:19502785)
GO_REF:0000024
RGD
UniProt
PMID:19502785 GO_REF:0000024 NCBI chr 7:99,677,295...99,900,765
Ensembl chr 7:99,677,290...99,900,764
JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO (PMID:25931565) RGD PMID:25931565 NCBI chr 2:4,095,126...4,195,819
Ensembl chr 2:4,095,129...4,195,810
JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO (PMID:25931565) RGD PMID:25931565 NCBI chr 1:264,670,836...264,733,465
Ensembl chr 1:264,670,841...264,733,306
JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:19502785) RGD PMID:19502785 NCBI chr 1:240,977,898...241,046,273
Ensembl chr 1:240,977,898...241,046,256
JBrowse link
positive regulation of mitotic cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nipbl NIPBL, cohesin loading factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
positive regulation of sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:18499658), (PMID:20124417), (PMID:27477908) RGD PMID:18499658 PMID:20124417 PMID:27477908 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in ISO (PMID:18499658) RGD PMID:18499658 NCBI chr 1:226,251,516...226,256,160
Ensembl chr 1:226,251,518...226,255,886
JBrowse link
G Rad21 RAD21 cohesin complex component involved_in ISO (PMID:18499658) RGD PMID:18499658 NCBI chr 7:91,511,755...91,538,673
Ensembl chr 7:91,511,756...91,538,673
JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (MGI:5050390|PMID:20813759) RGD PMID:20813759 MGI:5050390 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
regulation of centromeric sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4835108|PMID:20300119)
(PMID:20300119)
Ensembl
RGD
PMID:20300119 GO_REF:0000107 MGI:4835108 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4835108|PMID:20300119)
GO_REF:0000024
(PMID:20300119)
Ensembl
RGD
UniProt
PMID:20300119 GO_REF:0000024 GO_REF:0000107 MGI:4835108 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
regulation of cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdca5 cell division cycle associated 5 involved_in IBA
ISO
PMID:21873635
(PMID:17349791)
RGD PMID:17349791, PMID:21873635 RGD:13792537 NCBI chr 1:221,448,661...221,462,235
Ensembl chr 1:221,448,661...221,462,233
JBrowse link
G Hdac8 histone deacetylase 8 involved_in ISO
ISS
(PMID:22885700)
GO_REF:0000024
RGD
UniProt
PMID:22885700 GO_REF:0000024 NCBI chr  X:72,163,777...72,370,058
Ensembl chr  X:72,163,777...72,370,044
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO
IEA
(PMID:20551165)
GO_REF:0000107
RGD
Ensembl
PMID:20551165 GO_REF:0000107 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Wapl WAPL cohesin release factor involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5551791|MGI:5551807 (MGI:5544860|PMID:23975099)
(PMID:17113138)
RGD PMID:17113138 PMID:23975099, PMID:21873635 MGI:5544860, RGD:13792537 NCBI chr16:11,029,325...11,108,867
Ensembl chr16:11,032,531...11,106,589
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19599
    cellular process 18451
      cell cycle process 1167
        sister chromatid cohesion 56
          regulation of sister chromatid cohesion 22
            negative regulation of sister chromatid cohesion + 5
            positive regulation of sister chromatid cohesion + 10
            regulation of centromeric sister chromatid cohesion + 4
            regulation of cohesin loading + 5
            regulation of cohesin unloading + 0
            regulation of maintenance of sister chromatid cohesion + 9
Path 2
Term Annotations click to browse term
  biological_process 19599
    cellular process 18451
      cellular component organization or biogenesis 6720
        cellular component organization 6475
          organelle organization 4054
            chromosome organization 1223
              sister chromatid segregation 189
                sister chromatid cohesion 56
                  regulation of sister chromatid cohesion 22
                    negative regulation of sister chromatid cohesion + 5
                    positive regulation of sister chromatid cohesion + 10
                    regulation of centromeric sister chromatid cohesion + 4
                    regulation of cohesin loading + 5
                    regulation of cohesin unloading + 0
                    regulation of maintenance of sister chromatid cohesion + 9
paths to the root