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ONTOLOGY REPORT - ANNOTATIONS

Term:cytoplasm organization
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Accession:GO:0007028 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Synonyms:exact_synonym: cytoplasm organisation
 related_synonym: cytoplasm organization and biogenesis


show annotations for term's descendants           Sort by:
cytoplasm organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9657148) Ensembl
MGI		 PMID:9657148 GO_REF:0000107 NCBI chr 2:14,835,906...14,880,896
Ensembl chr 2:14,835,901...14,878,251 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19416848) Ensembl
MGI		 PMID:19416848 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G PADI6 peptidyl arginine deiminase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18599511) Ensembl
MGI		 PMID:18599511 GO_REF:0000107 NCBI chr 2:80,888,961...80,907,780
Ensembl chr 2:80,888,961...80,907,780 		JBrowse link
G RRN3 RRN3 homolog, RNA polymerase I transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15989966) Ensembl
MGI		 PMID:15989966 GO_REF:0000107 NCBI chr 6:28,478,770...28,507,722
Ensembl chr 6:28,478,829...28,507,696 		JBrowse link
G TFCP2L1 transcription factor CP2 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17079272) Ensembl
MGI		 PMID:17079272 GO_REF:0000107 NCBI chr19:28,869,454...28,923,835
Ensembl chr19:28,869,453...28,922,354 		JBrowse link
P granule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLD6 phospholipase D family member 6 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:42,208,594...42,212,403
Ensembl chr 5:42,208,609...42,210,796 		JBrowse link
G TDRD5 tudor domain containing 5 involved_in ISS
IBA		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:20,259,940...20,348,014
Ensembl chr 7:20,261,630...20,348,650 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:54,758,092...54,828,766
Ensembl chr11:54,758,826...54,828,743 		JBrowse link
G TDRKH tudor and KH domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:60,794,937...60,807,852
Ensembl chr17:60,795,813...60,805,449 		JBrowse link
vitellogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETV6 ETS variant transcription factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9250681) Ensembl
MGI		 PMID:9250681 GO_REF:0000107 NCBI chr27:34,351,206...34,587,060
Ensembl chr27:34,343,390...34,587,060 		JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044407) Ensembl
MGI		 PMID:11044407 GO_REF:0000107 NCBI chr18:51,366,719...51,374,411
Ensembl chr18:51,368,352...51,373,748 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr17:31,007,940...31,181,569
Ensembl chr17:31,009,257...31,142,063 		JBrowse link
G ZMIZ1 zinc finger MIZ-type containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17967885) Ensembl
MGI		 PMID:17967885 GO_REF:0000107 NCBI chr 4:28,807,368...29,035,946
Ensembl chr 4:28,854,908...29,045,986 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      cellular component organization or biogenesis 6943
        cellular component organization 6704
          cytoplasm organization 13
            pole plasm assembly + 4
            vitellogenesis + 4
paths to the root