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ONTOLOGY REPORT - ANNOTATIONS


Term:microtubule depolymerization
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Accession:GO:0007019 term browser browse the term
Definition:The removal of tubulin heterodimers from one or both ends of a microtubule.
Synonyms:exact_synonym: microtubule disassembly;   microtubule shortening
 narrow_synonym: microtubule catastrophe;   microtubule depolymerization during nuclear congression


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microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Katnb1 katanin p80 (WD40-containing) subunit B 1 JBrowse link 8 95,081,175 95,099,874 RGD:2290270
G Kif14 kinesin family member 14 JBrowse link 1 136,466,301 136,555,938 RGD:2290270
G Kif18a kinesin family member 18A JBrowse link 2 109,280,738 109,341,749 RGD:2290270
G Kif18b kinesin family member 18B JBrowse link 11 102,905,518 102,925,134 RGD:2290270
G Kif24 kinesin family member 24 JBrowse link 4 41,389,964 41,464,919 RGD:2290270
G Kif2b kinesin family member 2B JBrowse link 11 91,575,286 91,577,555 RGD:2290270
G Kif2c kinesin family member 2C JBrowse link 4 117,159,633 117,182,624 RGD:2290270
G Nckap5 NCK-associated protein 5 JBrowse link 1 125,913,636 126,830,796 RGD:2290270
G Nckap5l NCK-associated protein 5-like JBrowse link 15 99,422,034 99,457,938 RGD:2290270
G Nedd1 neural precursor cell expressed, developmentally down-regulated gene 1 JBrowse link 10 92,684,745 92,723,682 RGD:2290270
G Sgk1 serum/glucocorticoid regulated kinase 1 JBrowse link 10 21,882,184 21,999,903 RGD:2290270
G Smn1 survival motor neuron 1 JBrowse link 13 100,123,205 100,137,699 RGD:2290270
G Stmn1 stathmin 1 JBrowse link 4 134,468,320 134,473,843 RGD:2290270
G Stmn2 stathmin-like 2 JBrowse link 3 8,509,527 8,561,604 RGD:2290270
G Stmn3 stathmin-like 3 JBrowse link 2 181,306,459 181,314,500 RGD:2290270
G Stmn4 stathmin-like 4 JBrowse link 14 66,344,210 66,361,680 RGD:2290270
G Stmnd1 stathmin domain containing 1 JBrowse link 13 46,273,721 46,300,115 RGD:2290270
axonemal microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif19a kinesin family member 19A JBrowse link 11 114,764,970 114,791,166 RGD:2290270
mitotic spindle microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccsap centriole, cilia and spindle associated protein JBrowse link 8 123,839,973 123,860,209 RGD:2290270
negative regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC, WNT signaling pathway regulator JBrowse link 18 34,220,297 34,322,190 RGD:2290270
G Apc2 APC regulator of WNT signaling pathway 2 JBrowse link 10 80,295,949 80,318,257 RGD:2290270
G Arhgef2 rho/rac guanine nucleotide exchange factor (GEF) 2 JBrowse link 3 88,593,105 88,649,532 RGD:2290270
G Atxn7 ataxin 7 JBrowse link 14 13,961,283 14,107,316 RGD:2290270
G Bmerb1 bMERB domain containing 1 JBrowse link 16 13,986,612 14,105,052 RGD:2290270
G Camsap1 calmodulin regulated spectrin-associated protein 1 JBrowse link 2 25,926,838 25,983,562 RGD:2290270
G Camsap2 calmodulin regulated spectrin-associated protein family, member 2 JBrowse link 1 136,268,123 136,346,117 RGD:2290270
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 JBrowse link 8 3,587,237 3,609,075 RGD:2290270
G Cib1 calcium and integrin binding 1 (calmyrin) JBrowse link 7 80,227,156 80,232,805 RGD:2290270
G Ckap2 cytoskeleton associated protein 2 JBrowse link 8 22,168,149 22,185,819 RGD:2290270
G Clasp1 CLIP associating protein 1 JBrowse link 1 118,389,058 118,609,462 RGD:2290270
G Clasp2 CLIP associating protein 2 JBrowse link 9 113,740,077 113,919,697 RGD:2290270
G Dysf dysferlin JBrowse link 6 84,008,361 84,211,060 RGD:2290270
G Eml4 echinoderm microtubule associated protein like 4 JBrowse link 17 83,350,891 83,480,361 RGD:2290270
G Fgf13 fibroblast growth factor 13 JBrowse link X 59,062,139 59,585,572 RGD:2290270
G Gas2l1 growth arrest-specific 2 like 1 JBrowse link 11 5,054,131 5,065,348 RGD:2290270
G Gas2l2 growth arrest-specific 2 like 2 JBrowse link 11 83,421,635 83,429,521 RGD:2290270
G Hdac6 histone deacetylase 6 JBrowse link X 7,930,116 7,948,047 RGD:2290270
G Hdgfl3 HDGF like 3 JBrowse link 7 81,881,256 81,934,459 RGD:2290270
G Katnb1 katanin p80 (WD40-containing) subunit B 1 JBrowse link 8 95,081,175 95,099,874 RGD:2290270
G Map1a microtubule-associated protein 1 A JBrowse link 2 121,289,590 121,310,832 RGD:2290270
G Map1b microtubule-associated protein 1B JBrowse link 13 99,421,464 99,516,602 RGD:2290270
G Map2 microtubule-associated protein 2 JBrowse link 1 66,175,202 66,442,583 RGD:2290270
G Map6d1 MAP6 domain containing 1 JBrowse link 16 20,233,309 20,241,358 RGD:2290270
G Mid1 midline 1 JBrowse link X 169,685,199 169,990,798 RGD:2290270
G Mid1ip1 Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) JBrowse link X 10,717,365 10,719,702 RGD:2290270
G Nav3 neuron navigator 3 JBrowse link 10 109,681,260 110,455,722 RGD:2290270
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:2290270
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like JBrowse link 10 75,212,037 75,312,400 RGD:2290270
G Spef1 sperm flagellar 1 JBrowse link 2 131,170,261 131,174,810 RGD:2290270
G Stmn2 stathmin-like 2 JBrowse link 3 8,509,527 8,561,604 RGD:2290270
G Taok1 TAO kinase 1 JBrowse link 11 77,529,162 77,625,359 RGD:2290270
G Tpx2 TPX2, microtubule-associated JBrowse link 2 152,847,964 152,895,321 RGD:2290270
G Trim54 tripartite motif-containing 54 JBrowse link 5 31,116,612 31,137,626 RGD:2290270
G Ttbk2 tau tubulin kinase 2 JBrowse link 2 120,732,816 120,850,584 RGD:2290270
plus-end specific microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif19a kinesin family member 19A JBrowse link 11 114,764,970 114,791,166 RGD:2290270
positive regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htr1a 5-hydroxytryptamine (serotonin) receptor 1A JBrowse link 13 105,443,693 105,448,133 RGD:2290270
G Katnb1 katanin p80 (WD40-containing) subunit B 1 JBrowse link 8 95,081,175 95,099,874 RGD:2290270
G Stmn2 stathmin-like 2 JBrowse link 3 8,509,527 8,561,604 RGD:2290270
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 5 114,622,152 114,658,435 RGD:2290270
regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Map1a microtubule-associated protein 1 A JBrowse link 2 121,289,590 121,310,832 RGD:2290270
G Map1b microtubule-associated protein 1B JBrowse link 13 99,421,464 99,516,602 RGD:2290270
G Map1s microtubule-associated protein 1S JBrowse link 8 70,905,974 70,917,529 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23162
    cellular process 16953
      microtubule-based process 802
        microtubule cytoskeleton organization 598
          microtubule polymerization or depolymerization 122
            microtubule depolymerization 55
              astral microtubule depolymerization + 0
              cytoplasmic microtubule depolymerization + 1
              minus-end specific microtubule depolymerization 0
              mitotic spindle microtubule depolymerization 1
              negative regulation of microtubule depolymerization + 35
              plus-end specific microtubule depolymerization 1
              positive regulation of microtubule depolymerization 4
              regulation of microtubule depolymerization + 38
Path 2
Term Annotations click to browse term
  biological_process 23162
    cellular process 16953
      cellular component organization or biogenesis 6170
        cellular component organization 5984
          organelle organization 3691
            cytoskeleton organization 1367
              microtubule cytoskeleton organization 598
                microtubule polymerization or depolymerization 122
                  microtubule depolymerization 55
                    astral microtubule depolymerization + 0
                    cytoplasmic microtubule depolymerization + 1
                    minus-end specific microtubule depolymerization 0
                    mitotic spindle microtubule depolymerization 1
                    negative regulation of microtubule depolymerization + 35
                    plus-end specific microtubule depolymerization 1
                    positive regulation of microtubule depolymerization 4
                    regulation of microtubule depolymerization + 38
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.