Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear envelope organization
go back to main search page
Accession:GO:0006998 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
Synonyms:exact_synonym: nuclear envelope organisation
 related_synonym: nuclear envelope organization and biogenesis


show annotations for term's descendants           Sort by:
nuclear envelope organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTDNEP1 CTD nuclear envelope phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,273,460...7,281,158
Ensembl chr17:7,260,803...7,269,003 		JBrowse link
G DES desmin involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,675,761...106,684,129
Ensembl chr2B:225,266,261...225,273,604 		JBrowse link
G DMPK DM1 protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,779,173...42,791,981
Ensembl chr19:51,316,099...51,329,355 		JBrowse link
G LEMD2 LEM domain nuclear envelope protein 2 involved_in ISO (PMID:17097643) UniProt PMID:17097643 NCBI chr 6:33,344,372...33,363,143 JBrowse link
G LEMD3 LEM domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:23,668,368...23,747,369
Ensembl chr12:24,172,749...24,252,314 		JBrowse link
G LMNA lamin A/C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15608054) Ensembl
MGI
TreeGrafter		 PMID:15608054 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:131,456,819...131,482,275
Ensembl chr 1:135,253,700...135,311,539 		JBrowse link
G LMNB1 lamin B1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:122,179,513...122,240,848
Ensembl chr 5:127,949,457...128,010,721 		JBrowse link
G LMNB2 lamin B2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:1,440,462...1,469,601
Ensembl chr19:2,406,296...2,430,568 		JBrowse link
G NUP155 nucleoporin 155 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19070573) MGI
Ensembl		 PMID:19070573 GO_REF:0000107 NCBI chr 5:73,000,597...73,080,417
Ensembl chr 5:78,285,001...78,360,601 		JBrowse link
G NUP93 nucleoporin 93 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,007,481...37,122,785
Ensembl chr16:56,140,546...56,255,561 		JBrowse link
G PARP11 poly(ADP-ribose) polymerase family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25673562) Ensembl
MGI		 PMID:25673562 GO_REF:0000107 NCBI chr12:3,928,474...3,992,713
Ensembl chr12:3,857,256...3,879,242 		JBrowse link
G REEP3 receptor accessory protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:60,028,052...60,133,363
Ensembl chr10:62,351,045...62,454,931 		JBrowse link
G REEP4 receptor accessory protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,382,943...21,386,871
Ensembl chr 8:18,322,302...18,326,212 		JBrowse link
G TMEM170A transmembrane protein 170A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:56,012,951...56,062,442
Ensembl chr16:75,361,367...75,382,857 		JBrowse link
G TMEM201 transmembrane protein 201 involved_in ISO (PMID:21610090) UniProt PMID:21610090 NCBI chr 1:8,349,271...8,375,601
Ensembl chr 1:9,583,400...9,606,331 		JBrowse link
G TOR1A torsin family 1 member A acts_upstream_of_or_within ISO (PMID:16364897) MGI PMID:16364897 NCBI chr 9:100,940,554...100,951,726 JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15608054)
(PMID:11923874), (PMID:20961378)		 Ensembl
MGI		 PMID:11923874 PMID:15608054 PMID:20961378 GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
mitotic nuclear membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:57,314,692...57,331,261
Ensembl chr10:59,647,993...59,664,434 		JBrowse link
mitotic nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:130,091,476...130,123,533
Ensembl chr12:134,805,830...134,835,140 		JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in ISO (PMID:28841419) UniProt PMID:28841419 NCBI chr11:61,366,480...61,368,547
Ensembl chr11:64,693,447...64,695,509 		JBrowse link
G BROX BRO1 domain and CAAX motif containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,385,748...198,408,408
Ensembl chr 1:203,399,224...203,421,920 		JBrowse link
G REEP3 receptor accessory protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:60,028,052...60,133,363
Ensembl chr10:62,351,045...62,454,931 		JBrowse link
G REEP4 receptor accessory protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,382,943...21,386,871
Ensembl chr 8:18,322,302...18,326,212 		JBrowse link
nuclear fragmentation involved in apoptotic nuclear change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPER1 G protein-coupled estrogen receptor 1 involved_in ISO PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr 7:1,331,586...1,338,194 JBrowse link
nuclear inner membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732 		JBrowse link
nuclear membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP8L A-kinase anchoring protein 8 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,912,960...14,950,479
Ensembl chr19:15,897,969...15,936,486 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:37788673), (PMID:37832547) Ensembl
UniProt		 PMID:37788673 PMID:37832547 GO_REF:0000107 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G DCTN1 dynactin subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:74,428,060...74,458,574
Ensembl chr2A:75,934,752...75,953,296 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO PMID:18809722 MGI PMID:18809722 RGD:8554736 NCBI chr17:43,186,255...43,218,436
Ensembl chr17:47,918,827...47,950,749 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18809722) Ensembl
MGI		 PMID:18809722 GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,420,972...14,432,821
Ensembl chr16:23,928,773...23,940,779 		JBrowse link
nuclear membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EMD emerin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,792,178...143,794,530 JBrowse link
G NEMP1 nuclear envelope integral membrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,849,235...31,872,130
Ensembl chr12:32,102,141...32,125,141 		JBrowse link
G TMEM43 transmembrane protein 43 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18230648) MGI
TreeGrafter
Ensembl		 PMID:18230648 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:14,043,369...14,062,064
Ensembl chr 3:14,383,983...14,400,587 		JBrowse link
G TOR1A torsin family 1 member A acts_upstream_of_or_within ISO (PMID:20457914)
(PMID:20080676)		 MGI PMID:20080676 PMID:20457914 NCBI chr 9:100,940,554...100,951,726 JBrowse link
G TOR1AIP1 torsin 1A interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20457914) Ensembl
MGI
TreeGrafter		 PMID:20457914 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:155,362,806...155,401,185
Ensembl chr 1:159,043,072...159,081,408 		JBrowse link
G TOR1B torsin family 1 member B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20457914) Ensembl
MGI
TreeGrafter		 PMID:20457914 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:100,930,714...100,938,891
Ensembl chr 9:129,588,325...129,596,287 		JBrowse link
nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:70,398,021...70,411,383
Ensembl chr16:90,003,892...90,017,653 		JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:26040713) ComplexPortal PMID:26040713 NCBI chr18:2,452,393...2,455,509 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417 		JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241 		JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104 		JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,985,642...4,989,985 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:78,259,783...78,286,807
Ensembl chr 8:79,879,716...79,906,852 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:75,415,055...75,423,279
Ensembl chr17:81,144,837...81,151,962 		JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:22,497,479...22,513,005
Ensembl chr 8:19,434,829...19,450,221 		JBrowse link
G EMD emerin ISO RGD PMID:10569247 RGD:1342448 NCBI chr  X:143,792,178...143,794,530 JBrowse link
G NSFL1C NSFL1 cofactor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:1,597,171...1,622,708
Ensembl chr20:1,364,008...1,389,548 		JBrowse link
G SPAST spastin involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:32,085,245...32,175,137
Ensembl chr2A:32,150,792...32,885,029 		JBrowse link
G TM9SF1 transmembrane 9 superfamily member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,965,352...4,972,476 JBrowse link
G UBXN2A UBX domain protein 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:23,928,207...24,003,550
Ensembl chr2A:24,038,567...24,097,309 		JBrowse link
G UBXN2B UBX domain protein 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:54,865,251...54,905,243
Ensembl chr 8:56,516,601...56,556,489 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    cellular process 15499
      cellular component organization or biogenesis 6620
        cellular component organization 6401
          endomembrane system organization 571
            nuclear envelope organization 50
              microtubule organizing center attachment site organization 0
              nuclear membrane organization + 36
              pronuclear envelope synthesis + 0
Path 2
Term Annotations click to browse term
  biological_process 16440
    cellular process 15499
      cellular component organization or biogenesis 6620
        cellular component organization 6401
          organelle organization 3612
            nucleus organization 151
              nuclear envelope organization 50
                microtubule organizing center attachment site organization 0
                nuclear membrane organization + 36
                pronuclear envelope synthesis + 0
paths to the root