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ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear envelope organization
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Accession:GO:0006998 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
Synonyms:exact_synonym: nuclear envelope organisation
 related_synonym: nuclear envelope organization and biogenesis


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nuclear envelope organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctdnep1 CTD nuclear envelope phosphatase 1 involved_in ISO
ISS
(PMID:17420445)
GO_REF:0000024
RGD
UniProt
PMID:17420445 GO_REF:0000024 NCBI chr10:56,590,822...56,600,235
Ensembl chr10:56,591,292...56,600,232
JBrowse link
G Dmpk DM1 protein kinase involved_in ISO
IBA
(PMID:21949239)
(MGI:5298442|PMID:21949239)
PMID:21873635
RGD PMID:21949239, PMID:21873635 MGI:5298442, RGD:13792537 NCBI chr 1:79,988,096...79,999,358
Ensembl chr 1:79,989,019...79,999,364
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 involved_in IBA
ISO
PMID:21873635
(PMID:17097643)
RGD PMID:17097643, PMID:21873635 RGD:13792537 NCBI chr20:5,779,742...5,786,213
Ensembl chr20:6,545,083...6,556,350
JBrowse link
G Lemd3 LEM domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:62,976,671...63,045,860
Ensembl chr 7:62,996,336...63,045,728
JBrowse link
G Lmna lamin A/C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1890508 (MGI:3525771|PMID:15608054)
(PMID:27534416)
Ensembl
RGD
PMID:15608054 PMID:27534416 GO_REF:0000107 MGI:3525771 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Nup155 nucleoporin 155 involved_in ISO
IEA
(PMID:19070573)
GO_REF:0000107
RGD
Ensembl
PMID:19070573 GO_REF:0000107 NCBI chr 2:57,206,665...57,258,242
Ensembl chr 2:57,206,613...57,258,295
JBrowse link
G Nup93 nucleoporin 93 involved_in ISO
ISS
(PMID:26878725)
GO_REF:0000024
RGD
UniProt
PMID:26878725 GO_REF:0000024 NCBI chr19:11,159,769...11,263,980
Ensembl chr19:11,159,774...11,263,980
JBrowse link
G Parp11 poly (ADP-ribose) polymerase family, member 11 acts_upstream_of_or_within ISO MGI:4415414 (MGI:5641818|PMID:25673562) RGD PMID:25673562 MGI:5641818 NCBI chr 4:160,013,968...160,059,981
Ensembl chr 4:160,020,472...160,058,729
JBrowse link
G Reep3 receptor accessory protein 3 involved_in ISO (PMID:23911198) RGD PMID:23911198 NCBI chr20:22,887,053...22,998,985
Ensembl chr20:22,913,694...22,999,010
JBrowse link
G Reep4 receptor accessory protein 4 involved_in ISO
ISS
(PMID:23911198)
GO_REF:0000024
RGD
UniProt
PMID:23911198 GO_REF:0000024 NCBI chr15:52,235,283...52,238,490
Ensembl chr15:52,234,563...52,238,471
JBrowse link
G Spag4 sperm associated antigen 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:151,609,602...151,613,946
Ensembl chr 3:151,609,602...151,613,942
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO
IBA
UniProtKB:Q9UH99 (PMID:16380439)
PMID:21873635
RGD PMID:16380439, PMID:21873635 RGD:13792537 NCBI chr12:17,488,482...17,533,334
Ensembl chr12:17,488,487...17,522,534
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO
IBA
UniProtKB:Q9D666 (PMID:16380439)
PMID:21873635
RGD PMID:16380439, PMID:21873635 RGD:13792537 NCBI chr 7:120,950,391...120,967,583
Ensembl chr 7:120,951,560...120,967,490
JBrowse link
G Sun3 Sad1 and UNC84 domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:89,215,386...89,253,585
Ensembl chr14:89,215,703...89,238,094
JBrowse link
G Sun5 Sad1 and UNC84 domain containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,336,136...149,356,191
Ensembl chr 3:149,336,238...149,356,192
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 acts_upstream_of_or_within ISO MGI:3811076 (MGI:3810041|PMID:18477613) RGD PMID:18477613 MGI:3810041 NCBI chr 6:98,884,269...99,153,551 JBrowse link
G Tmem170a transmembrane protein 170A involved_in ISO (PMID:26906412) RGD PMID:26906412 NCBI chr19:44,090,418...44,101,365
Ensembl chr19:44,088,612...44,101,365
JBrowse link
G Tmem201 transmembrane protein 201 involved_in ISO (PMID:21610090) RGD PMID:21610090 NCBI chr 5:166,672,700...166,695,288
Ensembl chr 5:166,672,450...166,695,134
JBrowse link
G Tor1a torsin family 1, member A involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3623421|MGI:3623422 (MGI:3621520|PMID:16364897)
UniProt
RGD
PMID:16364897 GO_REF:0000024 MGI:3621520 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2158363|MGI:2180033|MGI:96794 (MGI:2178865|PMID:11923874), (MGI:3525771|PMID:15608054), (MGI:5607719|PMID:20961378) RGD PMID:11923874 PMID:15608054 PMID:20961378 MGI:2178865 MGI:3525771 MGI:5607719 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
mitotic nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO
ISS
IEA
(PMID:22770216)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:22770216 GO_REF:0000024 GO_REF:0000107 NCBI chr12:52,475,862...52,507,126
Ensembl chr12:52,475,863...52,507,126
JBrowse link
G Reep3 receptor accessory protein 3 involved_in ISO (PMID:23911198) RGD PMID:23911198 NCBI chr20:22,887,053...22,998,985
Ensembl chr20:22,913,694...22,999,010
JBrowse link
G Reep4 receptor accessory protein 4 involved_in ISO
ISS
(PMID:23911198)
GO_REF:0000024
RGD
UniProt
PMID:23911198 GO_REF:0000024 NCBI chr15:52,235,283...52,238,490
Ensembl chr15:52,234,563...52,238,471
JBrowse link
nuclear fragmentation involved in apoptotic nuclear change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IDA PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
nuclear inner membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tardbp TAR DNA binding protein involved_in ISO (PMID:18305152) RGD PMID:18305152 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
nuclear membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:11034899) RGD PMID:11034899 NCBI chr 7:14,340,168...14,369,835
Ensembl chr 7:14,340,170...14,369,821
JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO
ISS
(PMID:20679239)
GO_REF:0000024
RGD
UniProt
PMID:20679239 GO_REF:0000024 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in IDA PMID:18809722 MGI PMID:18809722 RGD:8554736 NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:2384054 (MGI:3822230|PMID:18809722) RGD PMID:18809722 MGI:3822230 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20679239)
Ensembl
UniProt
RGD
PMID:20679239 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
nuclear membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emd emerin involved_in IEA
ISO
GO_REF:0000107
(PMID:32923640)
Ensembl
RGD
PMID:32923640 GO_REF:0000107 NCBI chr  X:156,452,847...156,455,858
Ensembl chr  X:156,452,818...156,456,035
JBrowse link
G Nemp1 nuclear envelope integral membrane protein 1 involved_in ISO (PMID:32923640) RGD PMID:32923640 NCBI chr 7:70,987,860...70,996,029
Ensembl chr 7:70,987,861...70,995,474
JBrowse link
G Tmem43 transmembrane protein 43 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:18230648)
(MGI:3804743|PMID:18230648)
PMID:21873635
RGD PMID:18230648, PMID:21873635 MGI:3804743, RGD:13792537 NCBI chr 4:123,118,468...123,133,610
Ensembl chr 4:123,118,468...123,133,609
JBrowse link
G Tor1a torsin family 1, member A involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:1353605|MGI:3582693|MGI:3623421|MGI:3623422 (MGI:4431162|PMID:20080676), (MGI:4454599|PMID:20457914)
PMID:21873635
UniProt
RGD
PMID:20080676 PMID:20457914, PMID:21873635 GO_REF:0000024 MGI:4431162 MGI:4454599, RGD:13792537 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
G Tor1aip1 torsin 1A interacting protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1353568|MGI:4460952 (MGI:4454599|PMID:20457914)
RGD PMID:20457914, PMID:21873635 MGI:4454599, RGD:13792537 NCBI chr13:73,670,649...73,704,668
Ensembl chr13:73,670,141...73,704,678
JBrowse link
G Tor1b torsin family 1, member B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1353568 (MGI:4454599|PMID:20457914)
RGD PMID:20457914, PMID:21873635 MGI:4454599, RGD:13792537 NCBI chr 3:9,792,818...9,798,924
Ensembl chr 3:9,792,899...9,798,923
JBrowse link
nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:26040712) RGD PMID:26040712 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:26040712) RGD PMID:26040712 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:26040712) RGD PMID:26040712 NCBI chr15:51,385,373...51,400,606
Ensembl chr15:51,385,386...51,400,606
JBrowse link
G Emd emerin IEP RGD PMID:10569247 RGD:1342448 NCBI chr  X:156,452,847...156,455,858
Ensembl chr  X:156,452,818...156,456,035
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:146,980,923...147,005,478
Ensembl chr 3:146,980,923...147,005,439
JBrowse link
G Spast spastin involved_in ISO
ISS
(PMID:26040712)
GO_REF:0000024
RGD
UniProt
PMID:26040712 GO_REF:0000024 NCBI chr 6:22,230,067...22,282,166
Ensembl chr 6:22,230,928...22,281,886
JBrowse link
G Tmpo thymopoietin NAS RGD PMID:7737115 RGD:634476 NCBI chr 7:31,847,412...31,872,416
Ensembl chr 7:31,847,410...31,872,423
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,969,471...28,997,987
Ensembl chr 6:28,973,025...28,994,519
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:19,285,368...19,314,199
Ensembl chr 5:19,284,548...19,311,088
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19633
    cellular process 18481
      cellular component organization or biogenesis 6709
        cellular component organization 6466
          endomembrane system organization 500
            nuclear envelope organization 41
              microtubule organizing center attachment site organization 0
              nuclear membrane organization + 24
              pronuclear envelope synthesis + 0
Path 2
Term Annotations click to browse term
  biological_process 19633
    cellular process 18481
      cellular component organization or biogenesis 6709
        cellular component organization 6466
          organelle organization 4052
            nucleus organization 127
              nuclear envelope organization 41
                microtubule organizing center attachment site organization 0
                nuclear membrane organization + 24
                pronuclear envelope synthesis + 0
paths to the root