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ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear envelope organization
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Accession:GO:0006998 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
Synonyms:exact_synonym: nuclear envelope organisation
 related_synonym: nuclear envelope organization and biogenesis



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nuclear envelope organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctdnep1 CTD nuclear envelope phosphatase 1 involved_in ISO
ISS
(PMID:17420445)
GO_REF:0000024
RGD
UniProt
PMID:17420445 GO_REF:0000024 NCBI chr10:54,704,367...54,713,781
Ensembl chr10:54,704,148...54,713,781
JBrowse link
G Dmpk DM1 protein kinase involved_in ISO
IBA
(PMID:21949239)
(MGI:5298442|PMID:21949239)
PMID:21873635
RGD PMID:21949239 PMID:21873635 MGI:5298442, RGD:13792537 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 involved_in ISO (PMID:17097643) RGD PMID:17097643 NCBI chr20:5,282,397...5,296,621
Ensembl chr20:5,282,397...5,296,626
JBrowse link
G Lemd3 LEM domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
G Lmna lamin A/C involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:1890508 (MGI:3525771|PMID:15608054)
(PMID:27534416)
Ensembl
RGD
PMID:15608054 PMID:27534416 PMID:21873635 GO_REF:0000107 MGI:3525771, RGD:13792537 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G Lmnb1 lamin B1 involved_in ISO
IBA
ISS
IEA
(PMID:32910914)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:32910914 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
JBrowse link
G Lmnb2 lamin B2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within ISO (PMID:19070573) RGD PMID:19070573 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
JBrowse link
G Nup93 nucleoporin 93 involved_in ISO
ISS
(PMID:26878725)
GO_REF:0000024
RGD
UniProt
PMID:26878725 GO_REF:0000024 NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
JBrowse link
G Parp11 poly (ADP-ribose) polymerase family, member 11 acts_upstream_of_or_within ISO MGI:4415414 (MGI:5641818|PMID:25673562) RGD PMID:25673562 MGI:5641818 NCBI chr 4:160,298,040...160,344,369
Ensembl chr 4:160,304,905...160,341,946
JBrowse link
G Reep3 receptor accessory protein 3 involved_in ISO (PMID:23911198) RGD PMID:23911198 NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
JBrowse link
G Reep4 receptor accessory protein 4 involved_in ISO
ISS
(PMID:23911198)
GO_REF:0000024
RGD
UniProt
PMID:23911198 GO_REF:0000024 NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
JBrowse link
G Spag4 sperm associated antigen 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,581,006...144,587,879
Ensembl chr 3:144,581,095...144,585,435
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:Q9UH99 (PMID:16380439)
RGD PMID:16380439 PMID:21873635 RGD:13792537 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:Q9D666 (PMID:16380439)
RGD PMID:16380439 PMID:21873635 RGD:13792537 NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553
JBrowse link
G Sun3 Sad1 and UNC84 domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:83,710,136...83,748,982
Ensembl chr14:83,710,140...83,735,830
JBrowse link
G Sun5 Sad1 and UNC84 domain containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:142,334,902...142,355,330
Ensembl chr 3:142,334,928...142,355,330
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 acts_upstream_of_or_within ISO MGI:3811076 (MGI:3810041|PMID:18477613) RGD PMID:18477613 MGI:3810041 NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064
JBrowse link
G Tmem170a transmembrane protein 170A involved_in ISO (PMID:26906412) RGD PMID:26906412 NCBI chr19:39,833,947...39,846,807
Ensembl chr19:39,833,980...39,846,783
JBrowse link
G Tmem201 transmembrane protein 201 involved_in ISO (PMID:21610090) RGD PMID:21610090 NCBI chr 5:160,166,240...160,188,874
Ensembl chr 5:160,166,427...160,188,843
JBrowse link
G Tor1a torsin family 1, member A involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3623421|MGI:3623422 (MGI:3621520|PMID:16364897)
UniProt
RGD
PMID:16364897 GO_REF:0000024 MGI:3621520 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2158363|MGI:2180033|MGI:96794 (MGI:2178865|PMID:11923874), (MGI:3525771|PMID:15608054), (MGI:5607719|PMID:20961378) RGD PMID:11923874 PMID:15608054 PMID:20961378 MGI:2178865 MGI:3525771 MGI:5607719 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
mitotic nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO
ISS
(PMID:22770216)
GO_REF:0000024
RGD
UniProt
PMID:22770216 GO_REF:0000024 NCBI chr12:46,417,761...46,451,304
Ensembl chr12:46,417,759...46,500,514
JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO
ISS
(PMID:28841419)
GO_REF:0000024
RGD
UniProt
PMID:28841419 GO_REF:0000024 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188
JBrowse link
G Reep3 receptor accessory protein 3 involved_in ISO (PMID:23911198) RGD PMID:23911198 NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
JBrowse link
G Reep4 receptor accessory protein 4 involved_in ISO
ISS
(PMID:23911198)
GO_REF:0000024
RGD
UniProt
PMID:23911198 GO_REF:0000024 NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
JBrowse link
nuclear fragmentation involved in apoptotic nuclear change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IDA PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
nuclear inner membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tardbp TAR DNA binding protein involved_in ISO (PMID:18305152) RGD PMID:18305152 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
nuclear membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:11034899) RGD PMID:11034899 NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
JBrowse link
G C4h2orf81 similar to human chromosome 2 open reading frame 81 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:115,661,617...115,667,929
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO
IEA
ISS
(PMID:20679239)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20679239 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 acts_upstream_of_or_within IDA PMID:18809722 MGI PMID:18809722 RGD:8554736 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:2384054 (MGI:3822230|PMID:18809722) RGD PMID:18809722 MGI:3822230 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20679239)
Ensembl
UniProt
RGD
PMID:20679239 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
JBrowse link
nuclear membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emd emerin involved_in IEA
ISO
GO_REF:0000107
(PMID:32923640)
Ensembl
RGD
PMID:32923640 GO_REF:0000107 NCBI chr  X:152,038,990...152,042,190
Ensembl chr  X:152,038,998...152,045,807
JBrowse link
G Nemp1 nuclear envelope integral membrane protein 1 involved_in ISO (PMID:32923640) RGD PMID:32923640 NCBI chr 7:63,514,025...63,538,791
Ensembl chr 7:63,479,951...63,534,602
JBrowse link
G Tmem43 transmembrane protein 43 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:18230648)
(MGI:3804743|PMID:18230648)
RGD PMID:18230648 PMID:21873635 MGI:3804743, RGD:13792537 NCBI chr 4:123,977,680...123,992,823
Ensembl chr 4:123,977,625...123,992,825
JBrowse link
G Tor1a torsin family 1, member A involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:1353605|MGI:3582693|MGI:3623421|MGI:3623422 (MGI:4431162|PMID:20080676), (MGI:4454599|PMID:20457914)
PMID:21873635
UniProt
RGD
PMID:20080676 PMID:20457914 PMID:21873635 GO_REF:0000024 MGI:4431162 MGI:4454599, RGD:13792537 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
G Tor1aip1 torsin 1A interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1353568|MGI:4460952 (MGI:4454599|PMID:20457914)
PMID:21873635
RGD PMID:20457914 PMID:21873635 MGI:4454599, RGD:13792537 NCBI chr13:68,196,681...68,226,121
Ensembl chr13:68,196,681...68,225,862
JBrowse link
G Tor1b torsin family 1, member B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1353568 (MGI:4454599|PMID:20457914)
RGD PMID:20457914 PMID:21873635 MGI:4454599, RGD:13792537 NCBI chr 3:14,243,181...14,249,279
Ensembl chr 3:14,243,243...14,249,272
JBrowse link
nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:26040712), (PMID:26040713) RGD PMID:26040712 PMID:26040713 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr11:3,338,007...3,364,357
Ensembl chr11:3,337,494...3,385,181
JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:26040712), (PMID:26040713) RGD PMID:26040712 PMID:26040713 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO
IEA
(PMID:26040713)
GO_REF:0000107
RGD
Ensembl
PMID:26040713 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:26040712), (PMID:26040713) RGD PMID:26040712 PMID:26040713 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
JBrowse link
G Emd emerin IEP RGD PMID:10569247 RGD:1342448 NCBI chr  X:152,038,990...152,042,190
Ensembl chr  X:152,038,998...152,045,807
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
JBrowse link
G Spast spastin involved_in ISO
IEA
ISS
(PMID:26040712)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26040712 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954
JBrowse link
G Tmpo thymopoietin NAS RGD PMID:7737115 RGD:634476 NCBI chr 7:25,642,752...25,667,756
Ensembl chr 7:25,586,725...25,667,727
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,884,253...27,912,709
Ensembl chr 6:27,884,680...27,912,649
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20026
    cellular process 18613
      cellular component organization or biogenesis 6778
        cellular component organization 6535
          endomembrane system organization 560
            nuclear envelope organization 52
              microtubule organizing center attachment site organization 0
              nuclear membrane organization + 33
              pronuclear envelope synthesis + 0
Path 2
Term Annotations click to browse term
  biological_process 20026
    cellular process 18613
      cellular component organization or biogenesis 6778
        cellular component organization 6535
          organelle organization 3668
            nucleus organization 148
              nuclear envelope organization 52
                microtubule organizing center attachment site organization 0
                nuclear membrane organization + 33
                pronuclear envelope synthesis + 0
paths to the root