ONTOLOGY REPORT - ANNOTATIONS |
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Term: | nucleus organization |
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Accession: | GO:0006997
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browse the term
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Definition: | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus. |
Synonyms: | exact_synonym: | nuclear organisation; nuclear organization |
| related_synonym: | nuclear morphology; nuclear organization and biogenesis; nucleus organization and biogenesis |
| alt_id: | GO:0048287 |
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Bin1 |
bridging integrator 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:26506308) |
Ensembl RGD |
PMID:26506308 |
GO_REF:0000107 |
NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
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Cep55 |
centrosomal protein 55 |
NOT|involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 1:235,832,823...235,848,401
Ensembl chr 1:235,832,878...235,848,394
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Chek1 |
checkpoint kinase 1 |
acts_upstream_of_or_within |
ISO |
MGI:1928818 (MGI:1860048|PMID:10859163) |
RGD |
PMID:10859163 |
MGI:1860048 |
NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
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Chmp1a |
charged multivesicular body protein 1A |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
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Chmp1b |
charged multivesicular body protein 1B |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr18:60,740,349...60,742,879
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Chmp2a |
charged multivesicular body protein 2A |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
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Chmp2b |
charged multivesicular body protein 2B |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
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Chmp3 |
charged multivesicular body protein 3 |
NOT|involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
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Chmp4b |
charged multivesicular body protein 4B |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
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Chmp4c |
charged multivesicular body protein 4C |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
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Chmp5 |
charged multivesicular body protein 5 |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
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Chmp6 |
charged multivesicular body protein 6 |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
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Chmp7 |
charged multivesicular body protein 7 |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
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Golm1 |
golgi membrane protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:4124004 (MGI:4353491|PMID:18830387) |
RGD |
PMID:18830387 |
MGI:4353491 |
NCBI chr17:4,995,925...5,044,329
Ensembl chr17:4,996,104...5,034,057
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H3f3b |
H3.3 histone B |
acts_upstream_of_or_within |
ISO |
MGI:5474462 (MGI:5474379|PMID:23570311) |
RGD |
PMID:23570311 |
MGI:5474379 |
NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709
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Irag2 |
inositol 1,4,5-triphosphate receptor associated 2 |
involved_in |
ISO |
(MGI:6415450|PMID:29878215) |
RGD |
PMID:29878215 |
MGI:6415450 |
NCBI chr 4:178,088,902...178,143,569
Ensembl chr 4:178,088,507...178,143,557
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Lemd3 |
LEM domain containing 3 |
acts_upstream_of_or_within |
ISO |
MGI:3703328 (MGI:3702795|PMID:16943282) |
RGD |
PMID:16943282 |
MGI:3702795 |
NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
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Lmna |
lamin A/C |
acts_upstream_of_or_within |
ISO |
MGI:1890508|MGI:2177930 (MGI:3027329|PMID:14755333), (MGI:3618640|PMID:16511604) |
RGD |
PMID:14755333 PMID:16511604 |
MGI:3027329 MGI:3618640 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
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Map7 |
microtubule-associated protein 7 |
acts_upstream_of_or_within |
ISO |
MGI:2148221 (MGI:1859100|PMID:10837026) |
RGD |
PMID:10837026 |
MGI:1859100 |
NCBI chr 1:14,910,433...15,037,574
Ensembl chr 1:14,910,551...15,037,574
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Pdcd6ip |
programmed cell death 6 interacting protein |
NOT|involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773
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Plec |
plectin |
involved_in |
ISO IEA |
MGI:3799315 (MGI:5699472|PMID:26487297) GO_REF:0000107 |
RGD Ensembl |
PMID:26487297 |
GO_REF:0000107 MGI:5699472 |
NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
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Prm1 |
protamine 1 |
acts_upstream_of_or_within |
ISO |
MGI:3039794 (MGI:1934083|PMID:11326282) |
RGD |
PMID:11326282 |
MGI:1934083 |
NCBI chr10:4,871,817...4,872,312
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Prm2 |
protamine 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:3039800 (MGI:1934083|PMID:11326282) |
RGD |
PMID:11326282 PMID:21873635 |
MGI:1934083, RGD:13792537 |
NCBI chr10:4,876,285...4,877,026
Ensembl chr10:4,873,372...4,877,026
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Vps4a |
vacuolar protein sorting 4 homolog A |
involved_in |
ISO IEA |
(PMID:20616062) GO_REF:0000107 |
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887
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Vps4b |
vacuolar protein sorting 4 homolog B |
involved_in |
ISO |
(PMID:20616062) |
RGD |
PMID:20616062 |
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NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229
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Wdr73 |
WD repeat domain 73 |
involved_in |
ISO |
(PMID:25466283) |
RGD |
PMID:25466283 |
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NCBI chr 1:134,860,329...134,868,475
Ensembl chr 1:134,860,180...134,868,479
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Zmpste24 |
zinc metallopeptidase STE24 |
acts_upstream_of_or_within |
ISO |
MGI:2180033|MGI:96794 (MGI:2178865|PMID:11923874), (MGI:3618640|PMID:16511604), (MGI:3789238|PMID:16079796) |
RGD |
PMID:11923874 PMID:16079796 PMID:16511604 |
MGI:2178865 MGI:3618640 MGI:3789238 |
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
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Uspl1 |
ubiquitin specific peptidase like 1 |
involved_in |
ISO IBA |
(PMID:22878415) PMID:21873635 |
RGD |
PMID:22878415 PMID:21873635 |
RGD:13792537 |
NCBI chr12:5,823,460...5,850,470
Ensembl chr12:5,823,359...5,850,366
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Wrap53 |
WD repeat containing, antisense to TP53 |
involved_in |
ISO IBA ISS |
(PMID:21072240) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:21072240 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929
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Zpr1 |
ZPR1 zinc finger |
involved_in |
IBA ISO |
PMID:21873635 (MGI:3575865|PMID:15767679) |
RGD |
PMID:15767679 PMID:21873635 |
MGI:3575865, RGD:13792537 |
NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
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Wee2 |
WEE2 oocyte meiosis inhibiting kinase |
involved_in |
ISO |
(MGI:4948986|PMID:21454751) |
RGD |
PMID:21454751 |
MGI:4948986 |
NCBI chr 4:69,239,043...69,261,576
Ensembl chr 4:69,239,299...69,261,093
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Ankle2 |
ankyrin repeat and LEM domain containing 2 |
involved_in |
ISO IEA ISS |
(PMID:22770216) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:22770216 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:46,418,142...46,451,304
Ensembl chr12:46,417,759...46,500,514
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Banf1 |
BAF nuclear assembly factor 1 |
involved_in |
ISO ISS |
(PMID:28841419) GO_REF:0000024 |
RGD UniProt |
PMID:28841419 |
GO_REF:0000024 |
NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188
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Brox |
BRO1 domain and CAAX motif containing |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:34818527) |
UniProt RGD |
PMID:34818527 |
GO_REF:0000024 |
NCBI chr13:94,920,107...94,940,189
Ensembl chr13:94,920,112...94,940,227
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Reep3 |
receptor accessory protein 3 |
involved_in |
ISO |
(PMID:23911198) |
RGD |
PMID:23911198 |
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NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
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Reep4 |
receptor accessory protein 4 |
involved_in |
ISO ISS |
(PMID:23911198) GO_REF:0000024 |
RGD UniProt |
PMID:23911198 |
GO_REF:0000024 |
NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
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Phf2 |
PHD finger protein 2 |
involved_in |
ISO |
(PMID:20129925) |
RGD |
PMID:20129925 |
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NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
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Phf8 |
PHD finger protein 8 |
involved_in |
ISO |
(PMID:20208542) |
RGD |
PMID:20208542 |
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NCBI chr X:20,524,103...20,623,459
Ensembl chr X:20,524,558...20,623,410
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Cdkn2a |
cyclin-dependent kinase inhibitor 2A |
involved_in |
ISO |
(PMID:10360174) |
RGD |
PMID:10360174 |
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NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
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Celf3 |
CUGBP, Elav-like family member 3 |
acts_upstream_of_or_within |
ISO |
(MGI:5755769|PMID:25145264) |
RGD |
PMID:25145264 |
MGI:5755769 |
NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
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Sf1 |
splicing factor 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5755769|PMID:25145264) |
RGD |
PMID:25145264 |
MGI:5755769 |
NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
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Ctdnep1 |
CTD nuclear envelope phosphatase 1 |
involved_in |
ISO IEA ISS |
(PMID:17420445) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:17420445 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:54,704,367...54,713,781
Ensembl chr10:54,704,148...54,713,781
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Dmpk |
DM1 protein kinase |
involved_in |
ISO IBA |
(PMID:21949239) (MGI:5298442|PMID:21949239) PMID:21873635 |
RGD |
PMID:21949239 PMID:21873635 |
MGI:5298442, RGD:13792537 |
NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
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Efcc1 |
EF-hand and coiled-coil domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
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Lemd2 |
LEM domain nuclear envelope protein 2 |
involved_in |
ISO |
(PMID:17097643) |
RGD |
PMID:17097643 |
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NCBI chr20:5,282,397...5,296,621
Ensembl chr20:5,282,397...5,296,626
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Lemd3 |
LEM domain containing 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
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Lmna |
lamin A/C |
involved_in acts_upstream_of_or_within |
IEA IBA ISO |
GO_REF:0000107 PMID:21873635 MGI:1890508 (MGI:3525771|PMID:15608054) (PMID:27534416) |
Ensembl RGD |
PMID:15608054 PMID:27534416 PMID:21873635 |
GO_REF:0000107 MGI:3525771, RGD:13792537 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
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Lmnb1 |
lamin B1 |
involved_in |
ISO IBA ISS IEA |
(PMID:32910914) PMID:21873635 GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:32910914 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
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Lmnb2 |
lamin B2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
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Nup155 |
nucleoporin 155 |
acts_upstream_of_or_within |
ISO |
(PMID:19070573) |
RGD |
PMID:19070573 |
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NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
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Nup93 |
nucleoporin 93 |
involved_in |
ISO IEA ISS |
(PMID:26878725) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:26878725 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
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Parp11 |
poly (ADP-ribose) polymerase family, member 11 |
acts_upstream_of_or_within |
ISO |
MGI:4415414 (MGI:5641818|PMID:25673562) |
RGD |
PMID:25673562 |
MGI:5641818 |
NCBI chr 4:160,298,040...160,344,369
Ensembl chr 4:160,304,905...160,341,946
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Reep3 |
receptor accessory protein 3 |
involved_in |
ISO |
(PMID:23911198) |
RGD |
PMID:23911198 |
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NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
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Reep4 |
receptor accessory protein 4 |
involved_in |
ISO ISS |
(PMID:23911198) GO_REF:0000024 |
RGD UniProt |
PMID:23911198 |
GO_REF:0000024 |
NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
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Syne2 |
spectrin repeat containing nuclear envelope protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:3811076 (MGI:3810041|PMID:18477613) |
RGD |
PMID:18477613 |
MGI:3810041 |
NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064
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Tmem170a |
transmembrane protein 170A |
involved_in |
ISO |
(PMID:26906412) |
RGD |
PMID:26906412 |
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NCBI chr19:39,833,947...39,846,807
Ensembl chr19:39,833,980...39,846,783
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Tmem201 |
transmembrane protein 201 |
involved_in |
ISO |
(PMID:21610090) |
RGD |
PMID:21610090 |
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NCBI chr 5:160,166,240...160,188,874
Ensembl chr 5:160,166,427...160,188,843
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Tor1a |
torsin family 1, member A |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:3623421|MGI:3623422 (MGI:3621520|PMID:16364897) |
UniProt RGD |
PMID:16364897 |
GO_REF:0000024 MGI:3621520 |
NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
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Zmpste24 |
zinc metallopeptidase STE24 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:2158363|MGI:2180033|MGI:96794 (MGI:2178865|PMID:11923874), (MGI:3525771|PMID:15608054), (MGI:5607719|PMID:20961378) (MGI:2388414|PMID:12235369), (MGI:3719516|PMID:17652517), (MGI:5796042|PMID:27462105) |
RGD |
PMID:11923874 PMID:12235369 PMID:15608054 PMID:17652517 PMID:20961378 PMID:27462105 More...
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MGI:2178865 MGI:2388414 MGI:3525771 MGI:3719516 MGI:5607719 MGI:5796042 |
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
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Gper1 |
G protein-coupled estrogen receptor 1 |
involved_in |
IDA |
PMID:23907461 |
UniProt |
PMID:23907461 |
RGD:8553942 |
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
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Tardbp |
TAR DNA binding protein |
involved_in |
ISO |
(PMID:18305152) |
RGD |
PMID:18305152 |
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NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
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Sun1 |
Sad1 and UNC84 domain containing 1 |
involved_in |
ISO |
(PMID:18396275) |
RGD |
PMID:18396275 |
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NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571
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Sun2 |
Sad1 and UNC84 domain containing 2 |
involved_in |
ISO |
(PMID:19933576) |
RGD |
PMID:19933576 |
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NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553
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Syne1 |
spectrin repeat containing nuclear envelope protein 1 |
involved_in |
ISO |
(PMID:11801724) |
RGD |
PMID:11801724 |
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NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
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Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
ISO ISS |
(PMID:11952838) GO_REF:0000024 |
RGD UniProt |
PMID:11952838 |
GO_REF:0000024 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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Akap8l |
A-kinase anchoring protein 8 like |
involved_in |
ISO |
(PMID:11034899) |
RGD |
PMID:11034899 |
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NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
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Dctn1 |
dynactin subunit 1 |
involved_in |
ISO IEA ISS |
(PMID:20679239) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20679239 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
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|
G |
Ndel1 |
nudE neurodevelopment protein 1-like 1 |
acts_upstream_of_or_within |
IDA |
PMID:18809722 |
MGI |
PMID:18809722 |
RGD:8554736 |
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
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|
G |
Pafah1b1 |
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:2384054 (MGI:3822230|PMID:18809722) |
RGD |
PMID:18809722 |
MGI:3822230 |
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
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|
G |
Plk1 |
polo-like kinase 1 |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:20679239) |
Ensembl UniProt RGD |
PMID:20679239 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
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|
|
G |
Emd |
emerin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:32923640) |
Ensembl RGD |
PMID:32923640 |
GO_REF:0000107 |
NCBI chr X:152,038,990...152,042,190
Ensembl chr X:152,038,998...152,045,807
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|
G |
Nemp1 |
nuclear envelope integral membrane protein 1 |
involved_in |
ISO |
(PMID:32923640) |
RGD |
PMID:32923640 |
|
NCBI chr 7:63,514,025...63,538,791
Ensembl chr 7:63,479,951...63,534,602
|
|
G |
Tmem43 |
transmembrane protein 43 |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
PMID:21873635 GO_REF:0000107 (PMID:18230648) (MGI:3804743|PMID:18230648) |
Ensembl RGD |
PMID:18230648 PMID:21873635 |
GO_REF:0000107 MGI:3804743, RGD:13792537 |
NCBI chr 4:123,977,680...123,992,823
Ensembl chr 4:123,977,625...123,992,825
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G |
Tor1a |
torsin family 1, member A |
involved_in acts_upstream_of_or_within |
ISS ISO IBA |
GO_REF:0000024 MGI:1353605|MGI:3582693|MGI:3623421|MGI:3623422 (MGI:4431162|PMID:20080676), (MGI:4454599|PMID:20457914) PMID:21873635 |
UniProt RGD |
PMID:20080676 PMID:20457914 PMID:21873635 |
GO_REF:0000024 MGI:4431162 MGI:4454599, RGD:13792537 |
NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
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|
G |
Tor1aip1 |
torsin 1A interacting protein 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:1353568|MGI:4460952 (MGI:4454599|PMID:20457914) PMID:21873635 |
RGD |
PMID:20457914 PMID:21873635 |
MGI:4454599, RGD:13792537 |
NCBI chr13:68,196,681...68,226,121
Ensembl chr13:68,196,681...68,225,862
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|
G |
Tor1b |
torsin family 1, member B |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:1353568 (MGI:4454599|PMID:20457914) PMID:21873635 |
RGD |
PMID:20457914 PMID:21873635 |
MGI:4454599, RGD:13792537 |
NCBI chr 3:14,243,181...14,249,279
Ensembl chr 3:14,243,243...14,249,272
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|
|
G |
Chmp1a |
charged multivesicular body protein 1A |
involved_in |
ISO |
(PMID:26040713) |
RGD |
PMID:26040713 |
|
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
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|
G |
Chmp1b |
charged multivesicular body protein 1B |
involved_in |
ISO |
(PMID:26040713) |
RGD |
PMID:26040713 |
|
NCBI chr18:60,740,349...60,742,879
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|
G |
Chmp2a |
charged multivesicular body protein 2A |
involved_in |
ISO |
(PMID:26040712), (PMID:26040713) |
RGD |
PMID:26040712 PMID:26040713 |
|
NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
|
|
G |
Chmp2b |
charged multivesicular body protein 2B |
involved_in |
ISO |
(PMID:26040713) |
RGD |
PMID:26040713 |
|
NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
|
|
G |
Chmp3 |
charged multivesicular body protein 3 |
involved_in |
ISO |
(PMID:26040713) |
RGD |
PMID:26040713 |
|
NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
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|
G |
Chmp4b |
charged multivesicular body protein 4B |
involved_in |
ISO |
(PMID:26040712), (PMID:26040713) |
RGD |
PMID:26040712 PMID:26040713 |
|
NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
|
|
G |
Chmp4c |
charged multivesicular body protein 4C |
involved_in |
ISO IEA |
(PMID:26040713) GO_REF:0000107 |
RGD Ensembl |
PMID:26040713 |
GO_REF:0000107 |
NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
|
|
G |
Chmp5 |
charged multivesicular body protein 5 |
involved_in |
ISO |
(PMID:26040713) |
RGD |
PMID:26040713 |
|
NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
|
|
G |
Chmp6 |
charged multivesicular body protein 6 |
involved_in |
ISO |
(PMID:26040713) |
RGD |
PMID:26040713 |
|
NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
|
|
G |
Chmp7 |
charged multivesicular body protein 7 |
involved_in |
ISO |
(PMID:26040712), (PMID:26040713) |
RGD |
PMID:26040712 PMID:26040713 |
|
NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
|
|
G |
Emd |
emerin |
|
IEP |
|
RGD |
PMID:10569247 |
RGD:1342448 |
NCBI chr X:152,038,990...152,042,190
Ensembl chr X:152,038,998...152,045,807
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|
G |
Nsfl1c |
NSFL1 cofactor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
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|
G |
Spast |
spastin |
involved_in |
ISO IEA ISS |
(PMID:26040712) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:26040712 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954
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G |
Tmpo |
thymopoietin |
|
NAS |
|
RGD |
PMID:7737115 |
RGD:634476 |
NCBI chr 7:25,642,752...25,667,756
Ensembl chr 7:25,586,725...25,667,727
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|
G |
Ubxn2a |
UBX domain protein 2A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:27,884,364...27,912,767
Ensembl chr 6:27,884,680...27,912,649 Ensembl chr20:27,884,680...27,912,649
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|
G |
Ubxn2b |
UBX domain protein 2B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
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|
|
G |
Ahctf1 |
AT hook containing transcription factor 1 |
involved_in |
ISO |
(PMID:17098863) |
RGD |
PMID:17098863 |
|
NCBI chr13:91,481,936...91,536,391
Ensembl chr13:91,481,936...91,536,391
|
|
G |
Fxr1 |
FMR1 autosomal homolog 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:32706158) |
UniProt Ensembl RGD |
PMID:32706158 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
|
|
G |
Ndc1 |
NDC1 transmembrane nucleoporin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:16600873) |
Ensembl RGD |
PMID:16600873 |
GO_REF:0000107 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
|
|
G |
Nup107 |
nucleoporin 107 |
involved_in |
ISO ISS IEA |
(PMID:15229283) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370
|
|
G |
Nup153 |
nucleoporin 153 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:12802065), (PMID:15229283) |
UniProt Ensembl RGD |
PMID:12802065 PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
|
|
G |
Nup205 |
nucleoporin 205 |
involved_in |
ISO |
(PMID:15229283) |
RGD |
PMID:15229283 |
|
NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844
|
|
G |
Nup93 |
nucleoporin 93 |
involved_in |
ISO IEA ISS |
(PMID:15229283), (PMID:26878725) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:15229283 PMID:26878725 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
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|
G |
Nup98 |
nucleoporin 98 and 96 precursor |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:15229283) |
UniProt RGD |
PMID:15229283 |
GO_REF:0000024 |
NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
|
|
G |
Rtn4 |
reticulon 4 |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:26906412) |
Ensembl UniProt RGD |
PMID:26906412 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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|
G |
Tmem170a |
transmembrane protein 170A |
involved_in |
ISO |
(PMID:26906412) |
RGD |
PMID:26906412 |
|
NCBI chr19:39,833,947...39,846,807
Ensembl chr19:39,833,980...39,846,783
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|
G |
Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
ISO IMP |
(PMID:12802065) PMID:11839768 |
RGD |
PMID:12802065 PMID:11839768 |
RGD:8553300 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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|
|
G |
Efcc1 |
EF-hand and coiled-coil domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
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|
G |
Fxr1 |
FMR1 autosomal homolog 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:32706158) |
UniProt Ensembl RGD |
PMID:32706158 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
|
|
G |
Lmna |
lamin A/C |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
|
|
G |
Lmnb1 |
lamin B1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
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|
G |
Lmnb2 |
lamin B2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
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|
G |
Ndc1 |
NDC1 transmembrane nucleoporin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:16600873) |
Ensembl RGD |
PMID:16600873 |
GO_REF:0000107 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
|
|
|
G |
Ndc1 |
NDC1 transmembrane nucleoporin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
|
|
G |
Nup133 |
nucleoporin 133 |
involved_in |
ISO |
(PMID:15146057) |
RGD |
PMID:15146057 |
|
NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239
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|
G |
Nup205 |
nucleoporin 205 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844
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|
G |
Nup35 |
nucleoporin 35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130
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|
G |
Nup54 |
nucleoporin 54 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028
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G |
Pom121 |
POM121 transmembrane nucleoporin |
|
IDA |
|
RGD |
PMID:8335683 |
RGD:729484 |
NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294
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G |
Seh1l |
SEH1-like nucleoporin |
involved_in |
ISO |
(PMID:15146057) |
RGD |
PMID:15146057 |
|
NCBI chr18:61,346,986...61,369,987
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G |
Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:15229283) (PMID:11952838) |
UniProt Ensembl RGD |
PMID:11952838 PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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|
|
G |
Aff2 |
ALF transcription elongation factor 2 |
acts_upstream_of_or_within |
ISO |
(PMID:23562910) |
RGD |
PMID:23562910 |
|
NCBI chr X:147,928,130...148,432,484
Ensembl chr X:147,928,407...148,429,995
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|
G |
Dyrk3 |
dual specificity tyrosine phosphorylation regulated kinase 3 |
involved_in |
ISO IEA ISS |
(PMID:29973724) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:29973724 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:42,594,120...42,604,898
Ensembl chr13:42,594,121...42,604,778
|
|
G |
Srpk2 |
SRSF protein kinase 2 |
involved_in |
ISO |
(MGI:1195449|PMID:9446799) |
RGD |
PMID:9446799 |
MGI:1195449 |
NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
|
|
G |
Usp50 |
ubiquitin specific peptidase 50 |
acts_upstream_of_or_within |
ISO |
(PMID:28094437) |
RGD |
PMID:28094437 |
|
NCBI chr 3:114,012,104...114,035,468
Ensembl chr 3:114,011,702...114,035,476
|
|
|
G |
Ddx11 |
DEAD/H-box helicase 11 |
involved_in |
ISO |
(PMID:26089203) |
RGD |
PMID:26089203 |
|
NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
|
|
|
G |
Emg1 |
EMG1 N1-specific pseudouridine methyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:4839753 (MGI:4839400|PMID:20858271) |
RGD |
PMID:20858271 |
MGI:4839400 |
NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540
|
|
G |
Polr1b |
RNA polymerase I subunit B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3774130 (MGI:3771267|PMID:18023416) |
Ensembl RGD |
PMID:18023416 |
GO_REF:0000107 MGI:3771267 |
NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379
|
|
|
G |
Actr6 |
actin related protein 6 |
involved_in |
ISO |
(PMID:26164235) |
RGD |
PMID:26164235 |
|
NCBI chr 7:24,150,250...24,171,057
Ensembl chr 7:24,150,250...24,171,067
|
|
G |
Nolc1 |
nucleolar and coiled-body phosphoprotein 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:2135690|PMID:11424213) GO_REF:0000107 |
RGD Ensembl |
PMID:11424213 |
GO_REF:0000107 MGI:2135690 |
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
|
|
G |
Pes1 |
pescadillo ribosomal biogenesis factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2445464 (MGI:2445239|PMID:12237316) |
RGD |
PMID:12237316 |
MGI:2445239 |
NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
|
|
G |
Rps19 |
ribosomal protein S19 |
involved_in |
ISO |
(PMID:17053056) |
RGD |
PMID:17053056 |
|
NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
|
|
G |
Rrn3 |
RRN3 homolog, RNA polymerase I transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:3584037 (MGI:3583493|PMID:15989966) |
RGD |
PMID:15989966 |
MGI:3583493 |
NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
|
|
G |
Usp36 |
ubiquitin specific peptidase 36 |
involved_in |
ISO |
(MGI:6117526|PMID:29273634) |
RGD |
PMID:29273634 |
MGI:6117526 |
NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
|
|
G |
Zfp354a |
zinc finger protein 354A |
|
IMP |
|
RGD |
PMID:10075651 |
RGD:1303369 |
NCBI chr10:35,396,242...35,408,069
Ensembl chr10:35,396,231...35,408,068
|
|
|
G |
Daxx |
death-domain associated protein |
|
IMP |
|
RGD |
PMID:17289031 |
RGD:9587773 |
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
|
|
G |
Ets1 |
ETS proto-oncogene 1, transcription factor |
involved_in |
ISO IEA |
(PMID:11909962), (PMID:15247905) GO_REF:0000107 |
RGD Ensembl |
PMID:11909962 PMID:15247905 |
GO_REF:0000107 |
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
|
|
G |
Habp4 |
hyaluronan binding protein 4 |
involved_in |
ISO ISS |
(PMID:28695742) GO_REF:0000024 |
RGD UniProt |
PMID:28695742 |
GO_REF:0000024 |
NCBI chr17:934,931...957,604
Ensembl chr17:935,654...957,565
|
|
G |
Pml |
PML nuclear body scaffold |
involved_in acts_upstream_of_or_within |
ISO IMP |
(PMID:17081985) (MGI:2449749|PMID:12529400) (PMID:10779416) (PMID:8643677) |
RGD |
PMID:8643677 PMID:10779416 PMID:12529400 PMID:17081985 PMID:17289031 |
MGI:2449749, RGD:9587773 |
NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
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Serbp1 |
Serpine1 mRNA binding protein 1 |
involved_in |
ISO IEA ISS |
(PMID:28695742) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:28695742 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:96,401,587...96,421,816
Ensembl chr 4:96,401,477...96,421,813
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Sumo1 |
small ubiquitin-like modifier 1 |
acts_upstream_of_or_within |
ISO |
MGI:3819343 (MGI:3819151|PMID:19033381) |
RGD |
PMID:19033381 |
MGI:3819151 |
NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
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Baz2a |
bromodomain adjacent to zinc finger domain, 2A |
involved_in acts_upstream_of_or_within |
ISO |
(MGI:3587127|PMID:16085498), (MGI:3852313|PMID:12198165), (MGI:3852588|PMID:19578370) (MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299) |
RGD |
PMID:12198165 PMID:16085498 PMID:16678107 PMID:19578370 PMID:20168299 |
MGI:3587127 MGI:3653583 MGI:3852313 MGI:3852588 MGI:4462332 |
NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
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Bend3 |
BEN domain containing 3 |
involved_in |
ISO IBA |
(PMID:26100909) PMID:21873635 |
RGD |
PMID:26100909 PMID:21873635 |
RGD:13792537 |
NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671
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Rrp8 |
ribosomal RNA processing 8 |
involved_in |
ISS IEA ISO IBA |
GO_REF:0000024 GO_REF:0000107 (PMID:18485871) PMID:21873635 |
UniProt Ensembl RGD |
PMID:18485871 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
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Sirt1 |
sirtuin 1 |
involved_in |
ISO IEA |
(PMID:18485871) GO_REF:0000107 |
RGD Ensembl |
PMID:18485871 |
GO_REF:0000107 |
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Smarca5 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 |
involved_in |
ISO |
(MGI:3587127|PMID:16085498), (MGI:3852313|PMID:12198165) |
RGD |
PMID:12198165 PMID:16085498 |
MGI:3587127 MGI:3852313 |
NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
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Suv39h1 |
SUV39H1 histone lysine methyltransferase |
involved_in |
ISO |
(PMID:18485871) |
RGD |
PMID:18485871 |
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NCBI chr X:14,421,028...14,433,993
Ensembl chr X:14,421,109...14,433,982
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Suv39h1-ps1 |
SUV39H1 histone lysine methyltransferase, pseudogene 1 |
involved_in |
ISO |
(PMID:18485871) |
RGD |
PMID:18485871 |
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NCBI chr X:141,792,589...141,795,257
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Ubtf |
upstream binding transcription factor |
acts_upstream_of_or_within |
ISO |
(MGI:3836497|PMID:19103806) |
RGD |
PMID:19103806 |
MGI:3836497 |
NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
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Nfe2l1 |
NFE2 like bZIP transcription factor 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5525228|PMID:22971132) |
RGD |
PMID:22971132 |
MGI:5525228 |
NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
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Syne1 |
spectrin repeat containing nuclear envelope protein 1 |
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IMP |
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RGD |
PMID:23863972 |
RGD:13209017 |
NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
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Macroh2a1 |
macroH2A.1 histone |
NOT|involved_in |
ISO |
(PMID:24071584) |
RGD |
PMID:24071584 |
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NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
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Brdt |
bromodomain testis associated |
involved_in |
ISO IEA ISS |
(MGI:5447877|PMID:22922464) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:22922464 |
GO_REF:0000024 GO_REF:0000107 MGI:5447877 |
NCBI chr14:2,387,372...2,445,857
Ensembl chr14:2,387,796...2,445,842
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Chd5 |
chromodomain helicase DNA binding protein 5 |
involved_in |
ISO ISS |
(MGI:5559810|PMID:24252660) GO_REF:0000024 |
RGD UniProt |
PMID:24252660 |
GO_REF:0000024 MGI:5559810 |
NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
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Epc1 |
enhancer of polycomb homolog 1 |
involved_in |
ISO |
(PMID:28694333) |
RGD |
PMID:28694333 |
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NCBI chr17:54,503,358...54,594,444
Ensembl chr17:54,503,358...54,594,425
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Fshr |
follicle stimulating hormone receptor |
acts_upstream_of_or_within |
ISO |
MGI:2384087 (MGI:1855818|PMID:10775161), (MGI:2682484|PMID:14680821) |
RGD |
PMID:10775161 PMID:14680821 |
MGI:1855818 MGI:2682484 |
NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
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H1f7 |
H1.7 linker histone |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3531623|PMID:15710904) |
HGNC RGD |
PMID:15710904 |
GO_REF:0000024 MGI:3531623 |
NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930
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H2bc1 |
H2B clustered histone 1 |
involved_in |
ISO IEA ISS |
(MGI:5502464|PMID:23884607) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:23884607 |
GO_REF:0000024 GO_REF:0000107 MGI:5502464 |
NCBI chr17:41,172,041...41,172,510
Ensembl chr17:41,171,903...41,176,782 Ensembl chr17:41,171,903...41,176,782
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Kat5 |
lysine acetyltransferase 5 |
involved_in |
ISO IEA |
(MGI:5913510|PMID:28694333) GO_REF:0000107 |
RGD Ensembl |
PMID:28694333 |
GO_REF:0000107 MGI:5913510 |
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
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Piwil1 |
piwi-like RNA-mediated gene silencing 1 |
involved_in |
ISO |
(MGI:5905675|PMID:28552346) |
RGD |
PMID:28552346 |
MGI:5905675 |
NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
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Prm1 |
protamine 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr10:4,871,817...4,872,312
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Psme4 |
proteasome activator subunit 4 |
involved_in |
ISO |
(MGI:5494329|PMID:23706739) |
RGD |
PMID:23706739 |
MGI:5494329 |
NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408
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Rnf8 |
ring finger protein 8 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4441228|PMID:20153262), (MGI:5905675|PMID:28552346) |
UniProt RGD |
PMID:20153262 PMID:28552346 |
GO_REF:0000024 MGI:4441228 MGI:5905675 |
NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
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Selenof |
selenoprotein F |
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IMP |
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RGD |
PMID:11344099 |
RGD:728803 |
NCBI chr 2:233,642,075...233,674,853
Ensembl chr 2:233,641,932...233,674,846
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Sycp1 |
synaptonemal complex protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:109542 (MGI:5315075|PMID:22164254) |
Ensembl RGD |
PMID:22164254 |
GO_REF:0000107 MGI:5315075 |
NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
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Sycp3 |
synaptonemal complex protein 3 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:14643120) MGI:105931 (MGI:5315075|PMID:22164254) |
RGD |
PMID:14643120 PMID:22164254 |
MGI:5315075 |
NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
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Tnp1 |
transition protein 1 |
involved_in |
ISO ISS |
(MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) GO_REF:0000024 |
RGD UniProt |
PMID:15083521 PMID:15163613 PMID:15189834 PMID:28366643 |
GO_REF:0000024 MGI:3041389 MGI:3056208 MGI:3620321 MGI:5897488 |
NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
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Tnp2 |
transition protein 2 |
involved_in |
ISO ISS |
(MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) GO_REF:0000024 |
RGD UniProt |
PMID:15083521 PMID:15163613 PMID:15189834 PMID:28366643 |
GO_REF:0000024 MGI:3041389 MGI:3056208 MGI:3620321 MGI:5897488 |
NCBI chr10:4,879,812...4,880,540
Ensembl chr10:4,879,812...4,880,538
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Tssk6 |
testis-specific serine kinase 6 |
involved_in |
ISO |
(MGI:3580211|PMID:15870294) |
RGD |
PMID:15870294 |
MGI:3580211 |
NCBI chr16:19,523,626...19,526,074
Ensembl chr16:19,517,334...19,526,090
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Agfg1 |
ArfGAP with FG repeats 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:2182772 (MGI:3701727|PMID:16765935) PMID:21873635 |
RGD |
PMID:16765935 PMID:21873635 |
MGI:3701727, RGD:13792537 |
NCBI chr 9:84,124,845...84,182,615
Ensembl chr 9:84,125,120...84,178,128
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Gopc |
golgi associated PDZ and coiled-coil motif containing |
acts_upstream_of_or_within |
ISO |
MGI:2386794 (MGI:3701727|PMID:16765935) |
RGD |
PMID:16765935 |
MGI:3701727 |
NCBI chr20:31,727,617...31,776,904
Ensembl chr20:31,727,620...31,776,903
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Hmgb2 |
high mobility group box 2 |
acts_upstream_of_or_within |
ISO |
MGI:2387671 (MGI:3701727|PMID:16765935) |
RGD |
PMID:16765935 |
MGI:3701727 |
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
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Mfsd14a |
major facilitator superfamily domain containing 14A |
acts_upstream_of_or_within |
ISO |
MGI:5763015 (MGI:5763056|PMID:27107036) |
RGD |
PMID:27107036 |
MGI:5763056 |
NCBI chr 2:204,579,174...204,611,600
Ensembl chr 2:204,579,174...204,659,319
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Nectin2 |
nectin cell adhesion molecule 2 |
acts_upstream_of_or_within |
ISO |
MGI:2183405 (MGI:1354802|PMID:10733589) |
RGD |
PMID:10733589 |
MGI:1354802 |
NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
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Pygo1 |
pygopus family PHD finger 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
MGI:1916161 (MGI:5498404|PMID:23637336) PMID:21873635 |
RGD |
PMID:23637336 PMID:21873635 |
MGI:5498404, RGD:13792537 |
NCBI chr 8:73,666,210...73,684,873
Ensembl chr 8:73,665,593...73,684,869
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Pygo2 |
pygopus family PHD finger 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1919385 (MGI:5498404|PMID:23637336) |
RGD |
PMID:23637336 PMID:21873635 |
MGI:5498404, RGD:13792537 |
NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758
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Tbpl1 |
TATA-box binding protein like 1 |
acts_upstream_of_or_within |
ISO |
MGI:2181639 (MGI:3701727|PMID:16765935) |
RGD |
PMID:16765935 |
MGI:3701727 |
NCBI chr 1:22,777,892...22,803,305
Ensembl chr 1:22,778,459...22,803,122 Ensembl chr 1:22,778,459...22,803,122
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Tmf1 |
TATA element modulatory factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:4867389|MGI:4867392 (MGI:4849617|PMID:20691678) |
RGD |
PMID:20691678 |
MGI:4849617 |
NCBI chr 4:129,759,952...129,785,705
Ensembl chr 4:129,763,114...129,785,629
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Cfap61 |
cilia and flagella associated protein 61 |
acts_upstream_of_or_within |
ISO |
MGI:7444390 (MGI:7443006|PMID:36659204) |
RGD |
PMID:36659204 |
MGI:7443006 |
NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:133,354,197...133,633,320
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Dmrtc2 |
DMRT-like family C2 |
acts_upstream_of_or_within |
ISO |
MGI:3697743 (MGI:3697293|PMID:17098235) |
RGD |
PMID:17098235 |
MGI:3697293 |
NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
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H1f7 |
H1.7 linker histone |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3531623|PMID:15710904) |
HGNC RGD |
PMID:15710904 |
GO_REF:0000024 MGI:3531623 |
NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930
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Ift88 |
intraflagellar transport 88 |
acts_upstream_of_or_within |
ISO |
MGI:2157527 (MGI:4939808|PMID:21337470) |
RGD |
PMID:21337470 |
MGI:4939808 |
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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Kdm3a |
lysine demethylase 3A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3764891 (MGI:3763001|PMID:17943087) |
Ensembl RGD |
PMID:17943087 |
GO_REF:0000107 MGI:3763001 |
NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
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G |
Tnp1 |
transition protein 1 |
involved_in |
IBA ISO ISS |
PMID:21873635 (PMID:10781074) GO_REF:0000024 |
RGD UniProt |
PMID:10781074 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
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Term paths to the root
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