ONTOLOGY REPORT - ANNOTATIONS |
|
|
Term: | nucleus organization |
|
Accession: | GO:0006997
|
browse the term
|
Definition: | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus. |
Synonyms: | exact_synonym: | nuclear organisation; nuclear organization |
| related_synonym: | nuclear morphology; nuclear organization and biogenesis; nucleus organization and biogenesis |
| alt_id: | GO:0048287 |
|
|
|
G
|
Armc2
|
armadillo repeat containing 2
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1277238|MGI:1289258|MGI:1922422 (PMID:35451961) GO_REF:0000107
|
RGD Ensembl |
PMID:35451961 |
GO_REF:0000107 |
NCBI chr20:45,395,859...45,501,808
Ensembl chr20:45,394,127...45,504,819
|
|
G
|
Bin1
|
bridging integrator 1
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:26506308)
|
Ensembl RGD |
PMID:26506308 |
GO_REF:0000107 |
NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
|
|
G
|
Ccdc146
|
coiled-coil domain containing 146
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1277238|MGI:1289258|MGI:1916449 (PMID:35451961) GO_REF:0000107
|
RGD Ensembl |
PMID:35451961 |
GO_REF:0000107 |
NCBI chr 4:13,662,766...13,811,619
Ensembl chr 4:13,662,766...13,811,608
|
|
G
|
Cep55
|
centrosomal protein 55
|
NOT|involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr 1:235,832,823...235,848,401
Ensembl chr 1:235,832,878...235,848,394
|
|
G
|
Cfap43
|
cilia and flagella associated protein 43
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1277238|MGI:1916449|MGI:1922422 (PMID:35451961) GO_REF:0000107
|
RGD Ensembl |
PMID:35451961 |
GO_REF:0000107 |
NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443
|
|
G
|
Cfap44
|
cilia and flagella associated protein 44
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1289258|MGI:1916449|MGI:1922422 (PMID:35451961) GO_REF:0000107
|
RGD Ensembl |
PMID:35451961 |
GO_REF:0000107 |
NCBI chr11:56,199,772...56,283,964
Ensembl chr11:56,201,049...56,283,986
|
|
G
|
Chek1
|
checkpoint kinase 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:1928818 (PMID:10859163)
|
RGD |
PMID:10859163 |
|
NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
|
|
G
|
Chmp1a
|
charged multivesicular body protein 1A
|
involved_in
|
ISO IEA
|
(PMID:20616062) GO_REF:0000107
|
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
|
|
G
|
Chmp1b
|
charged multivesicular body protein 1B
|
involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr18:60,740,349...60,742,879
|
|
G
|
Chmp2a
|
charged multivesicular body protein 2A
|
involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
|
|
G
|
Chmp2b
|
charged multivesicular body protein 2B
|
involved_in
|
ISO IEA
|
(PMID:20616062) GO_REF:0000107
|
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
|
|
G
|
Chmp3
|
charged multivesicular body protein 3
|
NOT|involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
|
|
G
|
Chmp4b
|
charged multivesicular body protein 4B
|
involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
|
|
G
|
Chmp4c
|
charged multivesicular body protein 4C
|
involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
|
|
G
|
Chmp5
|
charged multivesicular body protein 5
|
involved_in
|
ISO IEA
|
(PMID:20616062) GO_REF:0000107
|
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
|
|
G
|
Chmp6
|
charged multivesicular body protein 6
|
involved_in
|
ISO IEA
|
(PMID:20616062) GO_REF:0000107
|
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
|
|
G
|
Chmp7
|
charged multivesicular body protein 7
|
involved_in
|
ISO IEA
|
(PMID:20616062) GO_REF:0000107
|
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
|
|
G
|
Golm1
|
golgi membrane protein 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:4124004 (PMID:18830387)
|
RGD |
PMID:18830387 |
|
NCBI chr17:4,995,925...5,044,329
Ensembl chr17:4,996,104...5,034,057
|
|
G
|
H3f3b
|
H3.3 histone B
|
acts_upstream_of_or_within
|
ISO
|
MGI:5474462 (PMID:23570311)
|
RGD |
PMID:23570311 |
|
NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709 Ensembl chr13:101,256,480...101,258,709
|
|
G
|
Irag2
|
inositol 1,4,5-triphosphate receptor associated 2
|
involved_in
|
ISO
|
(PMID:29878215)
|
RGD |
PMID:29878215 |
|
NCBI chr 4:178,088,902...178,143,569
Ensembl chr 4:178,088,507...178,143,557
|
|
G
|
Lemd3
|
LEM domain containing 3
|
acts_upstream_of_or_within
|
ISO
|
MGI:3703328 (PMID:16943282)
|
RGD |
PMID:16943282 |
|
NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
|
|
G
|
Lmna
|
lamin A/C
|
acts_upstream_of_or_within
|
ISO
|
MGI:1890508|MGI:2177930 (PMID:14755333), (PMID:16511604)
|
RGD |
PMID:14755333 PMID:16511604 |
|
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
|
|
G
|
Map7
|
microtubule-associated protein 7
|
acts_upstream_of_or_within
|
ISO
|
MGI:2148221 (PMID:10837026)
|
RGD |
PMID:10837026 |
|
NCBI chr 1:14,910,433...15,037,574
Ensembl chr 1:14,910,551...15,037,574
|
|
G
|
Pdcd6ip
|
programmed cell death 6 interacting protein
|
NOT|involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773
|
|
G
|
Plec
|
plectin
|
involved_in
|
ISO IEA
|
MGI:3799315 (PMID:26487297) GO_REF:0000107
|
RGD Ensembl |
PMID:26487297 |
GO_REF:0000107 |
NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
|
|
G
|
Prm1
|
protamine 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:3039794 (PMID:11326282)
|
RGD |
PMID:11326282 |
|
NCBI chr10:4,871,817...4,872,312
|
|
G
|
Prm2
|
protamine 2
|
involved_in acts_upstream_of_or_within
|
IBA ISO
|
GO_REF:0000033 MGI:3039800 (PMID:11326282)
|
GO_Central RGD |
PMID:11326282 |
GO_REF:0000033 |
NCBI chr10:4,876,285...4,877,026
Ensembl chr10:4,873,372...4,877,026
|
|
G
|
Syne2
|
spectrin repeat containing nuclear envelope protein 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064
|
|
G
|
Vps4a
|
vacuolar protein sorting 4 homolog A
|
involved_in
|
ISO IEA
|
(PMID:20616062) GO_REF:0000107
|
RGD Ensembl |
PMID:20616062 |
GO_REF:0000107 |
NCBI chr19:34,934,999...34,948,888
Ensembl chr19:34,934,961...34,948,887
|
|
G
|
Vps4b
|
vacuolar protein sorting 4 homolog B
|
involved_in
|
ISO
|
(PMID:20616062)
|
RGD |
PMID:20616062 |
|
NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229
|
|
G
|
Wdr73
|
WD repeat domain 73
|
involved_in
|
ISO
|
(PMID:25466283)
|
RGD |
PMID:25466283 |
|
NCBI chr 1:134,860,329...134,868,475
Ensembl chr 1:134,860,180...134,868,479
|
|
G
|
Zmpste24
|
zinc metallopeptidase STE24
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:2180033|MGI:96794 (PMID:11923874), (PMID:16079796), (PMID:16511604) GO_REF:0000107
|
RGD Ensembl |
PMID:11923874 PMID:16079796 PMID:16511604 |
GO_REF:0000107 |
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
|
|
|
G
|
Uspl1
|
ubiquitin specific peptidase like 1
|
involved_in
|
ISO IEA IBA
|
(PMID:22878415) GO_REF:0000002 GO_REF:0000033
|
RGD InterPro GO_Central |
PMID:22878415 |
GO_REF:0000002 GO_REF:0000033 |
NCBI chr12:5,823,460...5,850,470
Ensembl chr12:5,823,359...5,850,366
|
|
G
|
Vrk1
|
VRK serine/threonine kinase 1
|
involved_in
|
ISO IEA
|
(PMID:31090908) GO_REF:0000107
|
RGD Ensembl |
PMID:31090908 |
GO_REF:0000107 |
NCBI chr 6:124,914,770...124,981,508
Ensembl chr 6:124,914,855...124,981,436
|
|
G
|
Wrap53
|
WD repeat containing, antisense to TP53
|
involved_in
|
ISO IEA IBA ISS
|
(PMID:21072240) GO_REF:0000107 GO_REF:0000033 GO_REF:0000024
|
RGD Ensembl GO_Central UniProt |
PMID:21072240 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929
|
|
G
|
Zpr1
|
ZPR1 zinc finger
|
involved_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:15767679)
|
GO_Central Ensembl RGD |
PMID:15767679 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
|
|
|
G
|
Wee2
|
WEE2 oocyte meiosis inhibiting kinase
|
involved_in
|
ISO
|
(PMID:21454751)
|
RGD |
PMID:21454751 |
|
NCBI chr 4:69,239,043...69,261,576
Ensembl chr 4:69,239,299...69,261,093
|
|
|
G
|
Cdk1
|
cyclin-dependent kinase 1
|
involved_in
|
ISO IEA
|
(PMID:2188730) GO_REF:0000107
|
RGD Ensembl |
PMID:2188730 |
GO_REF:0000107 |
NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408
|
|
|
G
|
Ankle2
|
ankyrin repeat and LEM domain containing 2
|
involved_in
|
ISO IBA IEA ISS
|
(PMID:22770216) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
|
RGD GO_Central Ensembl UniProt |
PMID:22770216 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr12:46,418,142...46,451,304
Ensembl chr12:46,417,759...46,500,514
|
|
G
|
Banf1
|
barrier to autointegration nuclear assembly factor 1
|
involved_in
|
ISO IEA ISS
|
(PMID:28841419) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:28841419 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188
|
|
G
|
Brox
|
BRO1 domain and CAAX motif containing
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:34818527)
|
UniProt Ensembl RGD |
PMID:34818527 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:94,920,107...94,940,189
Ensembl chr13:94,920,112...94,940,227
|
|
G
|
Reep3
|
receptor accessory protein 3
|
involved_in
|
ISO
|
(PMID:23911198)
|
RGD |
PMID:23911198 |
|
NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
|
|
G
|
Reep4
|
receptor accessory protein 4
|
involved_in
|
ISO ISS
|
(PMID:23911198) GO_REF:0000024
|
RGD UniProt |
PMID:23911198 |
GO_REF:0000024 |
NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
|
|
|
G
|
Phf2
|
PHD finger protein 2
|
involved_in
|
ISO IEA
|
(PMID:20129925) GO_REF:0000107
|
RGD Ensembl |
PMID:20129925 |
GO_REF:0000107 |
NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
|
|
G
|
Phf8
|
PHD finger protein 8
|
involved_in
|
ISO IEA
|
(PMID:20208542) GO_REF:0000107
|
RGD Ensembl |
PMID:20208542 |
GO_REF:0000107 |
NCBI chr X:20,524,103...20,623,459
Ensembl chr X:20,524,558...20,623,410
|
|
|
G
|
Cdkn2a
|
cyclin-dependent kinase inhibitor 2A
|
involved_in
|
ISO
|
(PMID:10360174)
|
RGD |
PMID:10360174 |
|
NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149
|
|
G
|
Celf3
|
CUGBP, Elav-like family member 3
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:25145264) GO_REF:0000107
|
RGD Ensembl |
PMID:25145264 |
GO_REF:0000107 |
NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
|
|
G
|
Neat1
|
nuclear paraspeckle assembly transcript 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:4949933 (PMID:21444682)
|
RGD |
PMID:21444682 |
|
NCBI chr 1:203,129,229...203,140,014
|
|
G
|
Sf1
|
splicing factor 1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:25145264)
|
RGD |
PMID:25145264 |
|
NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
|
|
|
G
|
Ctdnep1
|
CTD nuclear envelope phosphatase 1
|
involved_in
|
ISO IEA ISS
|
(PMID:17420445) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:17420445 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:54,704,367...54,713,781
Ensembl chr10:54,704,148...54,713,781
|
|
G
|
Des
|
desmin
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:35959657)
|
UniProt Ensembl RGD |
PMID:35959657 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:76,850,979...76,858,695
Ensembl chr 9:76,850,982...76,858,699
|
|
G
|
Dmpk
|
DM1 protein kinase
|
involved_in
|
ISO IEA IBA
|
(PMID:21949239) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:21949239 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
|
|
G
|
Efcc1
|
EF-hand and coiled-coil domain containing 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
|
|
G
|
Lemd2
|
LEM domain nuclear envelope protein 2
|
involved_in
|
ISO
|
(PMID:17097643)
|
RGD |
PMID:17097643 |
|
NCBI chr20:5,282,397...5,296,621
Ensembl chr20:5,282,397...5,296,626
|
|
G
|
Lemd3
|
LEM domain containing 3
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
|
|
G
|
Lmna
|
lamin A/C
|
involved_in acts_upstream_of_or_within
|
ISO IBA ISS IEA
|
(PMID:27534416) MGI:1890508 (PMID:15608054) (PMID:2188730), (PMID:24741066), (PMID:37788673), (PMID:37832547) GO_REF:0000033 GO_REF:0000024 GO_REF:0000107
|
RGD GO_Central UniProt Ensembl |
PMID:2188730 PMID:15608054 PMID:24741066 PMID:27534416 PMID:37788673 PMID:37832547 More...
|
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
|
|
G
|
Lmnb1
|
lamin B1
|
involved_in
|
ISO IBA ISS IEA
|
(PMID:32910914) GO_REF:0000033 GO_REF:0000024 GO_REF:0000107
|
RGD GO_Central UniProt Ensembl |
PMID:32910914 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
|
|
G
|
Lmnb2
|
lamin B2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:9,443,308...9,459,468
Ensembl chr 7:8,789,314...8,808,665
|
|
G
|
Nup155
|
nucleoporin 155
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:19070573) GO_REF:0000107
|
RGD Ensembl |
PMID:19070573 |
GO_REF:0000107 |
NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
|
|
G
|
Nup93
|
nucleoporin 93
|
involved_in
|
ISO IEA ISS
|
(PMID:26878725) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:26878725 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
|
|
G
|
Parp11
|
poly (ADP-ribose) polymerase family, member 11
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:4415414 (PMID:25673562) GO_REF:0000107
|
RGD Ensembl |
PMID:25673562 |
GO_REF:0000107 |
NCBI chr 4:160,298,040...160,344,369
Ensembl chr 4:160,304,905...160,341,946
|
|
G
|
Reep3
|
receptor accessory protein 3
|
involved_in
|
ISO
|
(PMID:23911198)
|
RGD |
PMID:23911198 |
|
NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
|
|
G
|
Reep4
|
receptor accessory protein 4
|
involved_in
|
ISO ISS
|
(PMID:23911198) GO_REF:0000024
|
RGD UniProt |
PMID:23911198 |
GO_REF:0000024 |
NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
|
|
G
|
Tmem170a
|
transmembrane protein 170A
|
involved_in
|
ISO
|
(PMID:26906412)
|
RGD |
PMID:26906412 |
|
NCBI chr19:39,833,947...39,846,807
Ensembl chr19:39,833,980...39,846,783
|
|
G
|
Tmem201
|
transmembrane protein 201
|
involved_in
|
ISO
|
(PMID:21610090)
|
RGD |
PMID:21610090 |
|
NCBI chr 5:160,166,240...160,188,874
Ensembl chr 5:160,166,427...160,188,843
|
|
G
|
Tor1a
|
torsin family 1, member A
|
involved_in acts_upstream_of_or_within
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 MGI:3623421|MGI:3623422 (PMID:16364897)
|
UniProt Ensembl RGD |
PMID:16364897 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
|
|
G
|
Zmpste24
|
zinc metallopeptidase STE24
|
acts_upstream_of_or_within involved_in
|
ISO IEA
|
MGI:2158363|MGI:2180033|MGI:96794 (PMID:11923874), (PMID:15608054), (PMID:20961378) GO_REF:0000107 (PMID:12235369), (PMID:17652517), (PMID:27462105)
|
RGD Ensembl |
PMID:11923874 PMID:12235369 PMID:15608054 PMID:17652517 PMID:20961378 PMID:27462105 More...
|
GO_REF:0000107 |
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
|
|
|
G
|
Gper1
|
G protein-coupled estrogen receptor 1
|
involved_in
|
IDA
|
PMID:23907461
|
UniProt |
PMID:23907461 |
RGD:8553942 |
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
|
|
|
G
|
Tardbp
|
TAR DNA binding protein
|
involved_in
|
ISO IEA
|
(PMID:18305152) GO_REF:0000107
|
RGD Ensembl |
PMID:18305152 |
GO_REF:0000107 |
NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
|
|
|
G
|
Sun1
|
Sad1 and UNC84 domain containing 1
|
involved_in
|
ISO IEA
|
(PMID:18396275) GO_REF:0000107
|
RGD Ensembl |
PMID:18396275 |
GO_REF:0000107 |
NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571
|
|
G
|
Sun2
|
Sad1 and UNC84 domain containing 2
|
involved_in
|
ISO IEA
|
(PMID:19933576) GO_REF:0000107
|
RGD Ensembl |
PMID:19933576 |
GO_REF:0000107 |
NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553
|
|
G
|
Syne1
|
spectrin repeat containing nuclear envelope protein 1
|
involved_in
|
ISO
|
(PMID:11801724)
|
RGD |
PMID:11801724 |
|
NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
|
|
|
G
|
Tpr
|
translocated promoter region, nuclear basket protein
|
NOT|involved_in
|
ISO ISS
|
(PMID:11952838) GO_REF:0000024
|
RGD UniProt |
PMID:11952838 |
GO_REF:0000024 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
|
G
|
Akap8l
|
A-kinase anchoring protein 8 like
|
involved_in
|
ISO IEA
|
(PMID:11034899) GO_REF:0000107
|
RGD Ensembl |
PMID:11034899 |
GO_REF:0000107 |
NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
|
|
G
|
Atr
|
ATR serine/threonine kinase
|
acts_upstream_of
|
ISO IEA
|
(PMID:37788673), (PMID:37832547) GO_REF:0000107
|
RGD Ensembl |
PMID:37788673 PMID:37832547 |
GO_REF:0000107 |
NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
|
|
G
|
C4h2orf81
|
similar to human chromosome 2 open reading frame 81
|
involved_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:115,661,617...115,667,929
Ensembl chr 4:115,661,638...115,703,815
|
|
G
|
Dctn1
|
dynactin subunit 1
|
involved_in
|
ISO IEA ISS
|
(PMID:20679239) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:20679239 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
|
|
G
|
Ndel1
|
nudE neurodevelopment protein 1-like 1
|
acts_upstream_of_or_within
|
IDA
|
PMID:18809722
|
MGI |
PMID:18809722 |
RGD:8554736 |
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
|
|
G
|
Pafah1b1
|
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:2384054 (PMID:18809722) GO_REF:0000107
|
RGD Ensembl |
PMID:18809722 |
GO_REF:0000107 |
NCBI chr10:60,031,441...60,090,259
Ensembl chr10:59,534,117...59,591,808
|
|
G
|
Plk1
|
polo-like kinase 1
|
involved_in
|
IEA ISS ISO
|
GO_REF:0000107 GO_REF:0000024 (PMID:20679239)
|
Ensembl UniProt RGD |
PMID:20679239 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:186,147,658...186,157,637
Ensembl chr 1:176,716,420...176,726,400
|
|
|
G
|
Emd
|
emerin
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:32923640)
|
Ensembl RGD |
PMID:32923640 |
GO_REF:0000107 |
NCBI chr X:152,038,990...152,042,190
Ensembl chr X:152,038,998...152,045,807
|
|
G
|
Nemp1
|
nuclear envelope integral membrane protein 1
|
involved_in
|
ISO IEA
|
(PMID:32923640) GO_REF:0000107
|
RGD Ensembl |
PMID:32923640 |
GO_REF:0000107 |
NCBI chr 7:63,514,025...63,538,791
Ensembl chr 7:63,479,951...63,534,602
|
|
G
|
Tmem43
|
transmembrane protein 43
|
acts_upstream_of_or_within involved_in
|
ISO IEA IBA
|
(PMID:18230648) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:18230648 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 4:123,977,680...123,992,823
Ensembl chr 4:123,977,625...123,992,825
|
|
G
|
Tor1a
|
torsin family 1, member A
|
involved_in acts_upstream_of_or_within
|
ISS IEA ISO IBA
|
GO_REF:0000024 GO_REF:0000107 MGI:1353605|MGI:3582693|MGI:3623421|MGI:3623422 (PMID:20080676), (PMID:20457914) GO_REF:0000033
|
UniProt Ensembl RGD GO_Central |
PMID:20080676 PMID:20457914 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
|
|
G
|
Tor1aip1
|
torsin 1A interacting protein 1
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 MGI:1353568|MGI:4460952 (PMID:20457914)
|
GO_Central Ensembl RGD |
PMID:20457914 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:70,746,941...70,776,382
Ensembl chr13:68,196,681...68,225,862
|
|
G
|
Tor1b
|
torsin family 1, member B
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1353568 (PMID:20457914) GO_REF:0000107
|
RGD Ensembl |
PMID:20457914 |
GO_REF:0000107 |
NCBI chr 3:14,243,181...14,249,279
Ensembl chr 3:14,243,243...14,249,272
|
|
|
G
|
Chmp1a
|
charged multivesicular body protein 1A
|
involved_in
|
ISO IEA
|
(PMID:26040713) GO_REF:0000107
|
RGD Ensembl |
PMID:26040713 |
GO_REF:0000107 |
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
|
|
G
|
Chmp1b
|
charged multivesicular body protein 1B
|
involved_in
|
ISO
|
(PMID:26040713)
|
RGD |
PMID:26040713 |
|
NCBI chr18:60,740,349...60,742,879
|
|
G
|
Chmp2a
|
charged multivesicular body protein 2A
|
involved_in
|
ISO
|
(PMID:26040712), (PMID:26040713)
|
RGD |
PMID:26040712 PMID:26040713 |
|
NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452
|
|
G
|
Chmp2b
|
charged multivesicular body protein 2B
|
involved_in
|
ISO IEA
|
(PMID:26040713) GO_REF:0000107
|
RGD Ensembl |
PMID:26040713 |
GO_REF:0000107 |
NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181
|
|
G
|
Chmp3
|
charged multivesicular body protein 3
|
involved_in
|
ISO
|
(PMID:26040713)
|
RGD |
PMID:26040713 |
|
NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959
|
|
G
|
Chmp4b
|
charged multivesicular body protein 4B
|
involved_in
|
ISO
|
(PMID:26040712), (PMID:26040713)
|
RGD |
PMID:26040712 PMID:26040713 |
|
NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844
|
|
G
|
Chmp4c
|
charged multivesicular body protein 4C
|
involved_in
|
ISO
|
(PMID:26040713)
|
RGD |
PMID:26040713 |
|
NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668
|
|
G
|
Chmp5
|
charged multivesicular body protein 5
|
involved_in
|
ISO IEA
|
(PMID:26040713) GO_REF:0000107
|
RGD Ensembl |
PMID:26040713 |
GO_REF:0000107 |
NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
|
|
G
|
Chmp6
|
charged multivesicular body protein 6
|
involved_in
|
ISO IEA
|
(PMID:26040713) GO_REF:0000107
|
RGD Ensembl |
PMID:26040713 |
GO_REF:0000107 |
NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640
|
|
G
|
Chmp7
|
charged multivesicular body protein 7
|
involved_in
|
ISO IEA
|
(PMID:26040712), (PMID:26040713) GO_REF:0000107
|
RGD Ensembl |
PMID:26040712 PMID:26040713 |
GO_REF:0000107 |
NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216
|
|
G
|
Emd
|
emerin
|
|
IEP
|
|
RGD |
PMID:10569247 |
RGD:1342448 |
NCBI chr X:152,038,990...152,042,190
Ensembl chr X:152,038,998...152,045,807
|
|
G
|
Nsfl1c
|
NSFL1 cofactor
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
|
|
G
|
Spast
|
spastin
|
involved_in
|
ISO IEA ISS
|
(PMID:26040712) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:26040712 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954
|
|
G
|
Tmpo
|
thymopoietin
|
|
NAS
|
|
RGD |
PMID:7737115 |
RGD:634476 |
NCBI chr 7:25,642,752...25,667,756
Ensembl chr 7:25,586,725...25,667,727
|
|
G
|
Ubxn2a
|
UBX domain protein 2A
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 6:27,884,364...27,912,767
Ensembl chr 6:27,884,680...27,912,649 Ensembl chr20:27,884,680...27,912,649
|
|
G
|
Ubxn2b
|
UBX domain protein 2B
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
|
|
|
G
|
Ahctf1
|
AT hook containing transcription factor 1
|
involved_in
|
ISO
|
(PMID:17098863)
|
RGD |
PMID:17098863 |
|
NCBI chr13:91,481,936...91,536,391
Ensembl chr13:91,481,936...91,536,391
|
|
G
|
Fxr1
|
FMR1 autosomal homolog 1
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:32706158)
|
UniProt RGD |
PMID:32706158 |
GO_REF:0000024 |
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
|
|
G
|
Ndc1
|
NDC1 transmembrane nucleoporin
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:16600873)
|
Ensembl RGD |
PMID:16600873 |
GO_REF:0000107 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
|
|
G
|
Nup107
|
nucleoporin 107
|
involved_in
|
ISO ISS
|
(PMID:15229283) GO_REF:0000024
|
RGD UniProt |
PMID:15229283 |
GO_REF:0000024 |
NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370
|
|
G
|
Nup153
|
nucleoporin 153
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:12802065), (PMID:15229283)
|
UniProt Ensembl RGD |
PMID:12802065 PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
|
|
G
|
Nup205
|
nucleoporin 205
|
involved_in
|
ISO IEA
|
(PMID:15229283) GO_REF:0000107
|
RGD Ensembl |
PMID:15229283 |
GO_REF:0000107 |
NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844
|
|
G
|
Nup93
|
nucleoporin 93
|
involved_in
|
ISO IEA ISS
|
(PMID:15229283), (PMID:26878725) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:15229283 PMID:26878725 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
|
|
G
|
Nup98
|
nucleoporin 98 and 96 precursor
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:15229283)
|
UniProt Ensembl RGD |
PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
|
|
G
|
Rtn4
|
reticulon 4
|
involved_in
|
IEA ISS ISO
|
GO_REF:0000107 GO_REF:0000024 (PMID:26906412)
|
Ensembl UniProt RGD |
PMID:26906412 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
|
|
G
|
Tmem170a
|
transmembrane protein 170A
|
involved_in
|
ISO
|
(PMID:26906412)
|
RGD |
PMID:26906412 |
|
NCBI chr19:39,833,947...39,846,807
Ensembl chr19:39,833,980...39,846,783
|
|
G
|
Tpr
|
translocated promoter region, nuclear basket protein
|
NOT|involved_in
|
ISO IMP
|
(PMID:12802065) PMID:11839768
|
RGD |
PMID:12802065 PMID:11839768 |
RGD:8553300 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
|
G
|
Efcc1
|
EF-hand and coiled-coil domain containing 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
|
|
G
|
Fxr1
|
FMR1 autosomal homolog 1
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:32706158)
|
UniProt RGD |
PMID:32706158 |
GO_REF:0000024 |
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
|
|
G
|
Lmna
|
lamin A/C
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
|
|
G
|
Lmnb1
|
lamin B1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
|
|
G
|
Lmnb2
|
lamin B2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:9,443,308...9,459,468
Ensembl chr 7:8,789,314...8,808,665
|
|
G
|
Ndc1
|
NDC1 transmembrane nucleoporin
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:16600873)
|
Ensembl RGD |
PMID:16600873 |
GO_REF:0000107 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
|
|
|
G
|
Ndc1
|
NDC1 transmembrane nucleoporin
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291
|
|
G
|
Nup133
|
nucleoporin 133
|
involved_in
|
ISO IEA
|
(PMID:15146057) GO_REF:0000107
|
RGD Ensembl |
PMID:15146057 |
GO_REF:0000107 |
NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239
|
|
G
|
Nup205
|
nucleoporin 205
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844
|
|
G
|
Nup35
|
nucleoporin 35
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130
|
|
G
|
Nup54
|
nucleoporin 54
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028
|
|
G
|
Pom121
|
POM121 transmembrane nucleoporin
|
|
IDA
|
|
RGD |
PMID:8335683 |
RGD:729484 |
NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294
|
|
G
|
Seh1l
|
SEH1-like nucleoporin
|
involved_in
|
ISO IEA
|
(PMID:15146057) GO_REF:0000107
|
RGD Ensembl |
PMID:15146057 |
GO_REF:0000107 |
NCBI chr18:61,346,986...61,369,987
Ensembl chr18:61,332,158...61,458,379
|
|
G
|
Tpr
|
translocated promoter region, nuclear basket protein
|
NOT|involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:15229283) (PMID:11952838)
|
UniProt Ensembl RGD |
PMID:11952838 PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
|
G
|
Aff2
|
ALF transcription elongation factor 2
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:23562910) GO_REF:0000107
|
RGD Ensembl |
PMID:23562910 |
GO_REF:0000107 |
NCBI chr X:147,928,130...148,432,484
Ensembl chr X:147,928,407...148,429,995
|
|
G
|
Dyrk3
|
dual specificity tyrosine phosphorylation regulated kinase 3
|
involved_in
|
ISO ISS
|
(PMID:29973724) GO_REF:0000024
|
RGD UniProt |
PMID:29973724 |
GO_REF:0000024 |
NCBI chr13:42,594,120...42,604,898
Ensembl chr13:42,594,121...42,604,778
|
|
G
|
Srpk2
|
SRSF protein kinase 2
|
involved_in
|
ISO
|
(PMID:9446799)
|
RGD |
PMID:9446799 |
|
NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
|
|
G
|
Usp50
|
ubiquitin specific peptidase 50
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:28094437) GO_REF:0000107
|
RGD Ensembl |
PMID:28094437 |
GO_REF:0000107 |
NCBI chr 3:114,012,104...114,035,468
Ensembl chr 3:114,011,702...114,035,476
|
|
|
G
|
Ddx11
|
DEAD/H-box helicase 11
|
involved_in
|
ISO
|
(PMID:26089203)
|
RGD |
PMID:26089203 |
|
NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
|
|
|
G
|
Emg1
|
EMG1 N1-specific pseudouridine methyltransferase
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:4839753 (PMID:20858271) GO_REF:0000107
|
RGD Ensembl |
PMID:20858271 |
GO_REF:0000107 |
NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540
|
|
G
|
Polr1b
|
RNA polymerase I subunit B
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3774130 (PMID:18023416) GO_REF:0000107
|
RGD Ensembl |
PMID:18023416 |
GO_REF:0000107 |
NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379
|
|
|
G
|
Actr6
|
actin related protein 6
|
involved_in
|
ISO
|
(PMID:26164235)
|
RGD |
PMID:26164235 |
|
NCBI chr 7:24,150,250...24,171,057
Ensembl chr 7:24,150,250...24,171,067
|
|
G
|
Nolc1
|
nucleolar and coiled-body phosphoprotein 1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:11424213) GO_REF:0000107
|
RGD Ensembl |
PMID:11424213 |
GO_REF:0000107 |
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
|
|
G
|
Pes1
|
pescadillo ribosomal biogenesis factor 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:2445464 (PMID:12237316)
|
RGD |
PMID:12237316 |
|
NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
|
|
G
|
Rps19
|
ribosomal protein S19
|
involved_in
|
ISO
|
(PMID:17053056)
|
RGD |
PMID:17053056 |
|
NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508 Ensembl chr 7:80,480,951...80,486,508
|
|
G
|
Rrn3
|
RRN3 homolog, RNA polymerase I transcription factor
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3584037 (PMID:15989966) GO_REF:0000107
|
RGD Ensembl |
PMID:15989966 |
GO_REF:0000107 |
NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
|
|
G
|
Usp36
|
ubiquitin specific peptidase 36
|
involved_in
|
ISO IEA
|
(PMID:29273634) GO_REF:0000107
|
RGD Ensembl |
PMID:29273634 |
GO_REF:0000107 |
NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
|
|
G
|
Zfp354a
|
zinc finger protein 354A
|
|
IMP
|
|
RGD |
PMID:10075651 |
RGD:1303369 |
NCBI chr10:35,396,242...35,408,069
Ensembl chr10:35,396,231...35,408,068
|
|
|
G
|
Daxx
|
death-domain associated protein
|
|
IMP
|
|
RGD |
PMID:17289031 |
RGD:9587773 |
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
|
|
G
|
Ets1
|
ETS proto-oncogene 1, transcription factor
|
involved_in
|
ISO IEA
|
(PMID:11909962), (PMID:15247905) GO_REF:0000107
|
RGD Ensembl |
PMID:11909962 PMID:15247905 |
GO_REF:0000107 |
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
|
|
G
|
Habp4
|
hyaluronan binding protein 4
|
involved_in
|
ISO IEA ISS
|
(PMID:28695742) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:28695742 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:940,672...963,358
Ensembl chr17:935,654...957,565
|
|
G
|
Pml
|
PML nuclear body scaffold
|
involved_in acts_upstream_of_or_within
|
ISO IEA IMP
|
(PMID:17081985) GO_REF:0000107 (PMID:12529400) (PMID:10779416) (PMID:8643677)
|
RGD Ensembl |
PMID:8643677 PMID:10779416 PMID:12529400 PMID:17081985 PMID:17289031 |
GO_REF:0000107, RGD:9587773 |
NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971
|
|
G
|
Serbp1
|
Serpine1 mRNA binding protein 1
|
involved_in
|
ISO IEA ISS
|
(PMID:28695742) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:28695742 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:96,401,587...96,421,816
Ensembl chr 4:96,401,477...96,421,813
|
|
G
|
Sumo1
|
small ubiquitin-like modifier 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:3819343 (PMID:19033381)
|
RGD |
PMID:19033381 |
|
NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
|
|
|
G
|
Baz2a
|
bromodomain adjacent to zinc finger domain, 2A
|
acts_upstream_of_or_within involved_in
|
ISO
|
(PMID:16678107), (PMID:20168299) (PMID:12198165), (PMID:16085498), (PMID:19578370)
|
RGD |
PMID:12198165 PMID:16085498 PMID:16678107 PMID:19578370 PMID:20168299 |
|
NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
|
|
G
|
Bend3
|
BEN domain containing 3
|
involved_in
|
ISO IEA IBA
|
(PMID:26100909) GO_REF:0000002 GO_REF:0000107 GO_REF:0000033
|
RGD InterPro Ensembl GO_Central |
PMID:26100909 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr20:46,980,246...47,017,059
Ensembl chr20:46,979,831...47,014,671
|
|
G
|
Rrp8
|
ribosomal RNA processing 8
|
involved_in
|
ISS IBA IEA ISO
|
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (PMID:18485871)
|
UniProt GO_Central Ensembl RGD |
PMID:18485871 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
|
|
G
|
Sirt1
|
sirtuin 1
|
involved_in
|
ISO IEA
|
(PMID:18485871) GO_REF:0000107
|
RGD Ensembl |
PMID:18485871 |
GO_REF:0000107 |
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
|
|
G
|
Sirt2
|
sirtuin 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:93,181,472...93,204,499
Ensembl chr 1:84,052,903...84,076,975
|
|
G
|
Smarca5
|
SNF2 related chromatin remodeling ATPase 5
|
involved_in
|
ISO IEA
|
(PMID:12198165), (PMID:16085498) GO_REF:0000107
|
RGD Ensembl |
PMID:12198165 PMID:16085498 |
GO_REF:0000107 |
NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
|
|
G
|
Suv39h1
|
SUV39H1 histone lysine methyltransferase
|
involved_in
|
ISO
|
(PMID:18485871)
|
RGD |
PMID:18485871 |
|
NCBI chr X:14,421,028...14,433,993
Ensembl chr X:14,421,109...14,433,982
|
|
G
|
Suv39h1-ps1
|
SUV39H1 histone lysine methyltransferase, pseudogene 1
|
involved_in
|
ISO
|
(PMID:18485871)
|
RGD |
PMID:18485871 |
|
NCBI chr X:141,792,589...141,795,257
|
|
|
G
|
Nfe2l1
|
NFE2 like bZIP transcription factor 1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:22971132) GO_REF:0000107
|
RGD Ensembl |
PMID:22971132 |
GO_REF:0000107 |
NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
|
|
G
|
Syne1
|
spectrin repeat containing nuclear envelope protein 1
|
|
IMP
|
|
RGD |
PMID:23863972 |
RGD:13209017 |
NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
|
|
|
G
|
Macroh2a1
|
macroH2A.1 histone
|
NOT|involved_in
|
ISO
|
(PMID:24071584)
|
RGD |
PMID:24071584 |
|
NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
|
|
|
G
|
Brdt
|
bromodomain testis associated
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:22922464) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:22922464 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:2,387,372...2,445,857
Ensembl chr14:2,387,796...2,445,842
|
|
G
|
Ccer1
|
coiled-coil glutamate-rich protein 1
|
involved_in
|
ISS
|
GO_REF:0000024
|
UniProt |
|
GO_REF:0000024 |
NCBI chr 7:32,485,063...32,521,296
Ensembl chr 7:32,485,041...32,488,394
|
|
G
|
Chd5
|
chromodomain helicase DNA binding protein 5
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:24252660)
|
UniProt RGD |
PMID:24252660 |
GO_REF:0000024 |
NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
|
|
G
|
Epc1
|
enhancer of polycomb homolog 1
|
involved_in
|
ISO
|
(PMID:28694333)
|
RGD |
PMID:28694333 |
|
NCBI chr17:54,503,358...54,594,444
Ensembl chr17:54,503,358...54,594,425
|
|
G
|
Fshr
|
follicle stimulating hormone receptor
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:2384087 (PMID:10775161), (PMID:14680821) GO_REF:0000107
|
RGD Ensembl |
PMID:10775161 PMID:14680821 |
GO_REF:0000107 |
NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
|
|
G
|
H1f7
|
H1.7 linker histone
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:15710904)
|
HGNC RGD |
PMID:15710904 |
GO_REF:0000024 |
NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930
|
|
G
|
H2bc1
|
H2B clustered histone 1
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:23884607) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:23884607 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:41,172,041...41,172,510
Ensembl chr17:41,171,903...41,176,782 Ensembl chr17:41,171,903...41,176,782
|
|
G
|
Kat5
|
lysine acetyltransferase 5
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:28694333)
|
Ensembl RGD |
PMID:28694333 |
GO_REF:0000107 |
NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458
|
|
G
|
Piwil1
|
piwi-like RNA-mediated gene silencing 1
|
involved_in
|
ISO IEA
|
(PMID:28552346) GO_REF:0000107
|
RGD Ensembl |
PMID:28552346 |
GO_REF:0000107 |
NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
|
|
G
|
Prm1
|
protamine 1
|
involved_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr10:4,871,817...4,872,312
|
|
G
|
Psme4
|
proteasome activator subunit 4
|
involved_in
|
ISO IEA
|
(PMID:23706739) GO_REF:0000107
|
RGD Ensembl |
PMID:23706739 |
GO_REF:0000107 |
NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408
|
|
G
|
Rnf8
|
ring finger protein 8
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:20153262), (PMID:28552346)
|
UniProt RGD |
PMID:20153262 PMID:28552346 |
GO_REF:0000024 |
NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491
|
|
G
|
Selenof
|
selenoprotein F
|
|
IMP
|
|
RGD |
PMID:11344099 |
RGD:728803 |
NCBI chr 2:233,642,075...233,674,853
Ensembl chr 2:233,641,932...233,674,846
|
|
G
|
Sycp1
|
synaptonemal complex protein 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:109542 (PMID:22164254)
|
RGD |
PMID:22164254 |
|
NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737
|
|
G
|
Sycp3
|
synaptonemal complex protein 3
|
involved_in acts_upstream_of_or_within
|
ISO
|
(PMID:14643120) MGI:105931 (PMID:22164254)
|
RGD |
PMID:14643120 PMID:22164254 |
|
NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
|
|
G
|
Tnp1
|
transition protein 1
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:15083521), (PMID:15163613), (PMID:15189834), (PMID:28366643)
|
UniProt Ensembl RGD |
PMID:15083521 PMID:15163613 PMID:15189834 PMID:28366643 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
|
|
G
|
Tnp2
|
transition protein 2
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:15083521), (PMID:15163613), (PMID:15189834), (PMID:28366643)
|
UniProt RGD |
PMID:15083521 PMID:15163613 PMID:15189834 PMID:28366643 |
GO_REF:0000024 |
NCBI chr10:4,879,812...4,880,540
Ensembl chr10:4,879,812...4,880,538
|
|
G
|
Tssk6
|
testis-specific serine kinase 6
|
involved_in
|
ISO
|
(PMID:15870294)
|
RGD |
PMID:15870294 |
|
NCBI chr16:19,523,626...19,526,074
Ensembl chr16:19,517,334...19,526,090
|
|
|
G
|
Agfg1
|
ArfGAP with FG repeats 1
|
involved_in acts_upstream_of_or_within
|
IBA ISO
|
GO_REF:0000033 MGI:2182772 (PMID:16765935)
|
GO_Central RGD |
PMID:16765935 |
GO_REF:0000033 |
NCBI chr 9:84,124,845...84,182,615
Ensembl chr 9:84,125,120...84,178,128
|
|
G
|
Agfg1-ps1
|
ArfGAP with FG repeats 1, pseudogene 1
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr 3:138,778,150...138,779,864
|
|
G
|
Agfg2
|
ArfGAP with FG repeats 2
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr12:19,012,228...19,048,433
Ensembl chr12:19,012,258...19,048,421
|
|
G
|
Gopc
|
golgi associated PDZ and coiled-coil motif containing
|
acts_upstream_of_or_within
|
ISO
|
MGI:2386794 (PMID:16765935)
|
RGD |
PMID:16765935 |
|
NCBI chr20:31,727,617...31,776,904
Ensembl chr20:31,727,620...31,776,903
|
|
G
|
Hmgb2
|
high mobility group box 2
|
acts_upstream_of_or_within
|
ISO
|
MGI:2387671 (PMID:16765935)
|
RGD |
PMID:16765935 |
|
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 Ensembl chr 1:32,710,658...32,713,140
|
|
G
|
Mfsd14a
|
major facilitator superfamily domain containing 14A
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:5763015 (PMID:27107036) GO_REF:0000107
|
RGD Ensembl |
PMID:27107036 |
GO_REF:0000107 |
NCBI chr 2:204,579,174...204,611,600
Ensembl chr 2:204,579,174...204,659,319
|
|
G
|
Nectin2
|
nectin cell adhesion molecule 2
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:2183405 (PMID:10733589) GO_REF:0000107
|
RGD Ensembl |
PMID:10733589 |
GO_REF:0000107 |
NCBI chr 1:88,500,086...88,535,474
Ensembl chr 1:79,372,119...79,407,360
|
|
G
|
Pygo1
|
pygopus family PHD finger 1
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 MGI:1916161 (PMID:23637336)
|
GO_Central Ensembl RGD |
PMID:23637336 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:73,666,210...73,684,873
Ensembl chr 8:73,665,593...73,684,869
|
|
G
|
Pygo2
|
pygopus family PHD finger 2
|
involved_in acts_upstream_of_or_within
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 MGI:1919385 (PMID:23637336)
|
GO_Central Ensembl RGD |
PMID:23637336 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758
|
|
G
|
Tbpl1
|
TATA-box binding protein like 1
|
acts_upstream_of_or_within
|
ISO
|
MGI:2181639 (PMID:16765935)
|
RGD |
PMID:16765935 |
|
NCBI chr 1:22,777,892...22,803,305
Ensembl chr 1:22,778,459...22,803,122 Ensembl chr 1:22,778,459...22,803,122
|
|
G
|
Tmf1
|
TATA element modulatory factor 1
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:4867389|MGI:4867392 (PMID:20691678) GO_REF:0000107
|
RGD Ensembl |
PMID:20691678 |
GO_REF:0000107 |
NCBI chr 4:129,759,952...129,785,705
Ensembl chr 4:129,763,114...129,785,629
|
|
|
G
|
Cfap61
|
cilia and flagella associated protein 61
|
acts_upstream_of_or_within
|
ISO
|
MGI:7444390 (PMID:36659204)
|
RGD |
PMID:36659204 |
|
NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:133,354,197...133,633,320
|
|
G
|
Dmrtc2
|
DMRT-like family C2
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3697743 (PMID:17098235) GO_REF:0000107
|
RGD Ensembl |
PMID:17098235 |
GO_REF:0000107 |
NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
|
|
G
|
H1f7
|
H1.7 linker histone
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:15710904)
|
HGNC RGD |
PMID:15710904 |
GO_REF:0000024 |
NCBI chr 7:129,408,521...129,409,888
Ensembl chr 7:129,408,359...129,409,930
|
|
G
|
Ift88
|
intraflagellar transport 88
|
acts_upstream_of_or_within
|
ISO
|
MGI:2157527 (PMID:21337470)
|
RGD |
PMID:21337470 |
|
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
|
|
G
|
Kdm3a
|
lysine demethylase 3A
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3764891 (PMID:17943087) GO_REF:0000107
|
RGD Ensembl |
PMID:17943087 |
GO_REF:0000107 |
NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
|
|
G
|
Tnp1
|
transition protein 1
|
involved_in
|
ISS IEA IBA ISO
|
GO_REF:0000024 GO_REF:0000107 GO_REF:0000033 (PMID:10781074)
|
UniProt Ensembl GO_Central RGD |
PMID:10781074 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
|
|
Term paths to the root
|