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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA damage response
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Accession:GO:0006974 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
Synonyms:exact_synonym: cellular DNA damage response;   cellular response to DNA damage stimulus;   response to genotoxic stress
 broad_synonym: response to DNA damage stimulus
 alt_id: GO:0034984


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DNA damage response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aatf apoptosis antagonizing transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:1,209,760...1,320,046
Ensembl chrNW_004936490:1,209,967...1,319,802
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669
JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936738:1,202,668...1,217,825
Ensembl chrNW_004936738:1,202,608...1,221,321
JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409
JBrowse link
G Actr8 actin related protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936473:4,523,865...4,542,476
Ensembl chrNW_004936473:4,525,837...4,542,497
JBrowse link
G Aim2 absent in melanoma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:1,447,869...1,460,836
Ensembl chrNW_004936740:1,451,001...1,460,836
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936488:6,459,195...6,486,756 JBrowse link
G Alkbh7 alkB homolog 7 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936588:3,733,103...3,734,770
Ensembl chrNW_004936588:3,732,526...3,737,219
JBrowse link
G Alkbh8 alkB homolog 8, tRNA methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:1,070,484...1,123,427
Ensembl chrNW_004936551:1,076,117...1,123,877
JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in
NOT|involved_in
IEA
ISO
(MGI:5800654|PMID:27010503) Ensembl
UniProt
PMID:27010503 GO_REF:0000107 MGI:5800654 NCBI chrNW_004936596:3,568,810...3,573,506
Ensembl chrNW_004936596:3,569,814...3,573,344
JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:452,682...476,533
Ensembl chrNW_004936842:452,681...476,513
JBrowse link
G Apc APC regulator of WNT signaling pathway involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453
JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936877:666,545...669,351
Ensembl chrNW_004936877:666,523...669,338
JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936751:1,807,867...1,817,780
Ensembl chrNW_004936751:1,807,867...1,819,272
JBrowse link
G Aplf aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
JBrowse link
G Aptx aprataxin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936524:1,569,610...1,582,103
Ensembl chrNW_004936524:1,570,627...1,576,329
JBrowse link
G Armt1 acidic residue methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:4,344,074...4,355,405
Ensembl chrNW_004936489:4,344,365...4,355,484
JBrowse link
G Ash2l ASH2 like, histone lysine methyltransferase complex subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500065) MGI
Ensembl
PMID:17500065 GO_REF:0000107 NCBI chrNW_004936710:1,489,483...1,519,469
Ensembl chrNW_004936710:1,489,522...1,518,849
JBrowse link
G Atad5 ATPase family AAA domain containing 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3584078|PMID:15983387) MGI
Ensembl
PMID:15983387 GO_REF:0000107 MGI:3584078 NCBI chrNW_004936538:2,815,370...2,877,084
Ensembl chrNW_004936538:2,811,174...2,874,113
JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24550317)
(MGI:3836659|PMID:19061978)
MGI
InterPro
RGD
Ensembl
UniProt
PMID:12915485 PMID:19061978 PMID:19557000 PMID:24550317 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:3836659 RGD:1599370 RGD:2316101 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3584078|PMID:15983387) MGI
Ensembl
PMID:15983387 GO_REF:0000107 MGI:3584078 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898
JBrowse link
G Atrx ATRX chromatin remodeler involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936493:4,375,393...4,863,050
Ensembl chrNW_004936493:4,375,393...4,768,399
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,607,716...4,631,237
Ensembl chrNW_004936488:4,607,716...4,631,283
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1196094|PMID:9454845)
(MGI:2675761|PMID:12952892)
MGI
Ensembl
PMID:9454845 PMID:12952892 GO_REF:0000107 MGI:1196094 MGI:2675761 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,713,575...2,779,947
Ensembl chrNW_004936543:2,713,589...2,779,993
JBrowse link
G Bbc3 BCL2 binding component 3 involved_in ISO (MGI:4944151|PMID:20818388) BHF-UCL PMID:20818388 MGI:4944151 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Bccip BRCA2 and CDKN1A interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936486:13,816,805...13,831,055 JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,410,848...1,427,822
Ensembl chrNW_004936706:1,416,249...1,427,407
JBrowse link
G Bcl6 BCL6 transcription repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071
JBrowse link
G Bclaf1 BCL2 associated transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:3,681,145...3,711,831
Ensembl chrNW_004936560:3,680,657...3,712,004
JBrowse link
G Blm BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,194,092...16,295,803
Ensembl chrNW_004936483:16,194,092...16,255,905
JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:13,927,605...13,975,722
Ensembl chrNW_004936477:13,930,161...13,974,589
JBrowse link
G Brat1 BRCA1 associated ATM activator 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936823:393,878...404,348
Ensembl chrNW_004936823:393,842...404,366
JBrowse link
G Brca1 BRCA1 DNA repair associated acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5465472|PMID:23271346) MGI
InterPro
PMID:23271346 GO_REF:0000002 MGI:5465472 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated involved_in ISO (MGI:3818835|PMID:12410562) UniProt PMID:12410562 MGI:3818835 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO (PMID:23728299) UniProt PMID:23728299 NCBI chrNW_004936596:5,176,682...5,246,102
Ensembl chrNW_004936596:5,177,147...5,246,518
JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:541,831...567,197
Ensembl chrNW_004936886:546,222...570,521
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8944033) MGI
Ensembl
PMID:8944033 GO_REF:0000107 NCBI chrNW_004936567:1,310,525...1,314,469
Ensembl chrNW_004936567:1,309,658...1,314,515
JBrowse link
G Casp3 caspase 3 acts_upstream_of_or_within ISO (MGI:3691523|PMID:11092819) MGI PMID:11092819 MGI:3691523 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp9 caspase 9 involved_in
acts_upstream_of_or_within
ISO (PMID:15657060)
(MGI:3691523|PMID:11092819)
UniProt
MGI
PMID:11092819 PMID:15657060 MGI:3691523 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cbl Cbl proto-oncogene ISO RGD PMID:19546888 RGD:11038823 NCBI chrNW_004936542:4,136,389...4,235,746
Ensembl chrNW_004936542:4,136,511...4,228,288
JBrowse link
G Cbx1 chromobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,242,949...13,261,195
Ensembl chrNW_004936490:13,242,949...13,261,195
JBrowse link
G Cbx3 chromobox 3 involved_in ISO (PMID:27248496) UniProt PMID:27248496 NCBI chrNW_004936478:2,981,218...2,989,329
Ensembl chrNW_004936478:2,981,228...2,989,324
JBrowse link
G Cbx5 chromobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,441,770...11,480,924
Ensembl chrNW_004936512:11,450,060...11,480,727
JBrowse link
G Ccdc13 coiled-coil domain containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936695:2,350,668...2,404,882
Ensembl chrNW_004936695:2,350,640...2,402,557
JBrowse link
G Ccnd1 cyclin D1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936599:973,838...983,316 JBrowse link
G Ccnk cyclin K acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22012619) MGI
Ensembl
PMID:22012619 GO_REF:0000107 NCBI chrNW_004936604:3,283,996...3,316,516
Ensembl chrNW_004936604:3,283,715...3,319,572
JBrowse link
G Cdk3 cyclin dependent kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24550317) MGI
Ensembl
PMID:24550317 GO_REF:0000107 NCBI chrNW_004936594:1,159,644...1,164,735
Ensembl chrNW_004936594:1,160,268...1,169,103
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675761|PMID:12952892) MGI
Ensembl
PMID:12952892 GO_REF:0000107 MGI:2675761 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Cdkn2aip CDKN2A interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:5,638,671...5,642,276
Ensembl chrNW_004936554:5,639,448...5,642,092
JBrowse link
G Cenpx centromere protein X involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936594:5,517,665...5,520,606
Ensembl chrNW_004936594:5,516,915...5,520,553
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:28738408) UniProt PMID:28738408 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936588:2,536,141...2,564,897
Ensembl chrNW_004936588:2,542,265...2,564,962
JBrowse link
G Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 involved_in ISO (PMID:22228767) UniProt PMID:22228767
G Chd1l chromodomain helicase DNA binding protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937024:164,309...216,967
Ensembl chrNW_004937024:164,327...216,851
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3836861|PMID:19137022) MGI
Ensembl
PMID:19137022 GO_REF:0000107 MGI:3836861 NCBI chrNW_004936483:9,803,887...9,931,132
Ensembl chrNW_004936483:9,803,623...9,931,272
JBrowse link
G Chek1 checkpoint kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2156961|PMID:11790307), (MGI:2449744|PMID:12529385) MGI
Ensembl
PMID:11790307 PMID:12529385 GO_REF:0000107 MGI:2156961 MGI:2449744 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24550317) MGI
Ensembl
PMID:24550317 GO_REF:0000107 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,963,863...15,967,458
Ensembl chrNW_004936483:15,960,036...15,968,094
JBrowse link
G Clock clock circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Ctc1 CST telomere replication complex component 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5426340|PMID:22531781) MGI
Ensembl
PMID:22531781 GO_REF:0000107 MGI:5426340 NCBI chrNW_004936595:1,456,911...1,476,331
Ensembl chrNW_004936595:1,454,508...1,476,593
JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:484,356...489,643
Ensembl chrNW_004936631:484,356...489,643
JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379
JBrowse link
G CUNH10orf90 chromosome unknown C10orf90 homolog involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chrNW_004936486:14,311,976...14,499,733
Ensembl chrNW_004936486:14,311,431...14,499,902
JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936486:4,199,527...4,221,984
Ensembl chrNW_004936486:4,199,410...4,221,761
JBrowse link
G Dcun1d5 defective in cullin neddylation 1 domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:4,936,337...4,966,053
Ensembl chrNW_004936551:4,936,293...4,966,088
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004936562:1,960,406...1,974,809
Ensembl chrNW_004936562:1,960,406...1,974,867
JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004936498:11,115,055...11,127,215
Ensembl chrNW_004936498:11,115,209...11,128,948
JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:181,457...209,286
Ensembl chrNW_004936606:186,223...208,499
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936521:9,843,867...9,884,248
Ensembl chrNW_004936521:9,843,900...9,883,932
JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,347,991...1,389,836
Ensembl chrNW_004936557:1,347,991...1,389,836
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:19818714) UniProt PMID:19818714 NCBI chrNW_004936536:8,844,778...8,853,442
Ensembl chrNW_004936536:8,844,575...8,851,146
JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:5,542,873...5,555,469
Ensembl chrNW_004936545:5,542,803...5,554,136
JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:10,232,140...10,233,557
Ensembl chrNW_004936492:10,232,335...10,233,438
JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:11,307,739...11,316,203
Ensembl chrNW_004936490:11,308,393...11,314,785
JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936694:2,217,352...2,220,556
Ensembl chrNW_004936694:2,217,811...2,220,432
JBrowse link
G Endog endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:16,282,115...16,285,486
Ensembl chrNW_004936487:16,282,398...16,285,418
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153690|PMID:11707424), (MGI:3530719|PMID:15692571), (MGI:3613277|PMID:15979950)
(MGI:893240|PMID:9197240)
MGI
Ensembl
UniProt
PMID:9197240 PMID:11707424 PMID:15692571 PMID:15979950 GO_REF:0000043 GO_REF:0000107 MGI:2153690 MGI:3530719 MGI:3613277 MGI:893240 NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936472:8,209,482...8,234,696
Ensembl chrNW_004936472:8,209,540...8,234,334
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2137100|PMID:11408355), (MGI:3613277|PMID:15979950) MGI
Ensembl
PMID:11408355 PMID:15979950 GO_REF:0000107 MGI:2137100 MGI:3613277 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:7,560,055...7,609,650
Ensembl chrNW_004936480:7,560,023...7,609,648
JBrowse link
G Etaa1 ETAA1 activator of ATR kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:11,962,161...11,975,164
Ensembl chrNW_004936491:11,962,087...11,979,349
JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO (PMID:22266823), (PMID:22343915), (PMID:22396592), (PMID:22705371) UniProt PMID:22266823 PMID:22343915 PMID:22396592 PMID:22705371 NCBI chrNW_004936737:1,296,152...1,300,038 JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,482,649...3,488,331
Ensembl chrNW_004936581:3,480,412...3,490,195
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936483:916,377...949,833
Ensembl chrNW_004936483:912,346...949,833
JBrowse link
G Fancc FA complementation group C involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936626:3,980,311...4,147,042
Ensembl chrNW_004936626:3,982,647...4,159,976
JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2670547|PMID:12893777) MGI
Ensembl
PMID:12893777 GO_REF:0000107 MGI:2670547 NCBI chrNW_004936602:3,162,177...3,220,468
Ensembl chrNW_004936602:3,161,960...3,209,868
JBrowse link
G Fancf FA complementation group F acts_upstream_of_or_within ISO (MGI:5305003|PMID:21915857) MGI PMID:21915857 MGI:5305003 NCBI chrNW_004936654:3,298,193...3,301,251 JBrowse link
G Fancg FA complementation group G acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2154029|PMID:11719385)
(MGI:2159044|PMID:11823446)
MGI
Ensembl
PMID:11719385 PMID:11823446 GO_REF:0000107 MGI:2154029 MGI:2159044 NCBI chrNW_004936524:3,103,912...3,110,246
Ensembl chrNW_004936524:3,104,176...3,109,779
JBrowse link
G Fancl FA complementation group L involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:4,057,312...4,119,966
Ensembl chrNW_004936491:4,029,388...4,119,976
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:8,635,752...8,689,949
Ensembl chrNW_004936484:8,635,753...8,689,971
JBrowse link
G Fbxo31 F-box protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,801,539...1,831,988
Ensembl chrNW_004936641:1,801,548...1,830,440
JBrowse link
G Fbxo45 F-box protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068
JBrowse link
G Fbxo5 F-box protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:5,589,621...5,602,221
Ensembl chrNW_004936489:5,589,538...5,600,539
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936581:1,328,685...1,332,713
Ensembl chrNW_004936581:1,328,685...1,332,728
JBrowse link
G Fh fumarate hydratase involved_in ISO (PMID:20231875), (PMID:26237645) UniProt PMID:20231875 PMID:26237645 NCBI chrNW_004936526:8,936,096...8,965,155
Ensembl chrNW_004936526:8,935,991...8,965,367
JBrowse link
G Flywch1 FLYWCH-type zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,212,517...1,236,576
Ensembl chrNW_004936694:1,215,774...1,236,606
JBrowse link
G Fmn2 formin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,832,790...10,169,488
Ensembl chrNW_004936526:9,833,128...10,169,267
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:24813610) UniProt PMID:24813610 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856
JBrowse link
G Foxo1 forkhead box O1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436
JBrowse link
G Foxp1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324
JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936493:13,157,114...13,182,797
Ensembl chrNW_004936493:13,157,119...13,177,525
JBrowse link
G Gnl1 G protein nucleolar 1 (putative) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:228,680...239,253
Ensembl chrNW_004936837:224,487...239,127
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936558:1,176,154...1,196,028
Ensembl chrNW_004936558:1,173,064...1,196,063
JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936837:546,561...552,686
Ensembl chrNW_004936837:546,509...552,754
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936489:9,983,935...9,993,179
Ensembl chrNW_004936489:9,992,156...9,992,938
JBrowse link
G Helb DNA helicase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:4,318,256...4,346,438
Ensembl chrNW_004936545:4,318,227...4,346,525
JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:38,419,147...38,606,312
Ensembl chrNW_004936471:38,419,129...38,606,323
JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936798:261,566...284,480
Ensembl chrNW_004936798:261,661...273,011
JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:619,120...633,590
Ensembl chrNW_004936541:620,754...633,499
JBrowse link
G Hus1 HUS1 checkpoint clamp component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2156961|PMID:11790307) MGI
Ensembl
PMID:11790307 GO_REF:0000107 MGI:2156961 NCBI chrNW_004936478:22,393,952...22,414,349
Ensembl chrNW_004936478:22,400,111...22,414,115
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936751:478,978...622,818
Ensembl chrNW_004936751:478,300...622,820
JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432078|PMID:20467439)
(PMID:20467439)
MGI
Ensembl
PMID:20467439 GO_REF:0000107 MGI:5432078 NCBI chrNW_004936837:401,475...402,769
Ensembl chrNW_004936837:401,524...402,741
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,280,254...1,306,964
Ensembl chrNW_004936809:1,257,654...1,301,813
JBrowse link
G Inip INTS3 and NABP interacting protein involved_in IEA InterPro
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936559:813,912...830,768
Ensembl chrNW_004936559:813,940...830,763
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936471:4,374,802...4,478,894
Ensembl chrNW_004936471:4,375,395...4,478,899
JBrowse link
G Ints3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,511,364...3,553,441
Ensembl chrNW_004936580:3,511,311...3,553,756
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G KDM4D lysine demethylase 4D involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936674:53,187...54,726 JBrowse link
G Kin Kin17 DNA and RNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:7,031,160...7,058,696
Ensembl chrNW_004936484:7,030,862...7,060,125
JBrowse link
G Lig1 DNA ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936664:2,242,916...2,276,286
Ensembl chrNW_004936664:2,242,897...2,276,715
JBrowse link
G Lig3 DNA ligase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
JBrowse link
G Lig4 DNA ligase 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G LOC101957203 general transcription factor IIH subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936480:72,730...92,868 JBrowse link
G LOC101958033 uncharacterized LOC101958033 acts_upstream_of_or_within ISO (MGI:5299279|PMID:21824519) MGI PMID:21824519 MGI:5299279 NCBI chrNW_004936653:3,268,229...3,543,173 JBrowse link
G LOC101959362 peroxisomal membrane protein PEX14 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936623:4,313,186...4,462,462
Ensembl chrNW_004936623:4,313,147...4,462,528
Ensembl chrNW_004936623:4,313,147...4,462,528
JBrowse link
G LOC101966907 histone H2AX involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
JBrowse link
G LOC101967900 lysine-specific demethylase 4D acts_upstream_of_or_within ISO (MGI:5552986|PMID:24550317) MGI PMID:24550317 MGI:5552986 NCBI chrNW_004936674:53,200...73,042 JBrowse link
G LOC101969875 histone PARylation factor 1-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936504:5,914,204...5,915,314 JBrowse link
G LOC101970824 histone PARylation factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936516:1,763,935...1,785,538 JBrowse link
G LOC101976824 nuclear factor of activated T cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:3,453,475...3,579,292
Ensembl chrNW_004936514:3,467,178...3,578,882
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055
JBrowse link
G Macrod1 mono-ADP ribosylhydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:5,018,636...5,154,844
Ensembl chrNW_004936599:5,018,770...5,154,491
JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:3,917,060...5,859,527
Ensembl chrNW_004936485:3,919,525...5,859,251
JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3813746|PMID:18694567) MGI
Ensembl
PMID:18694567 GO_REF:0000107 MGI:3813746 NCBI chrNW_004936481:18,903,153...18,928,195
Ensembl chrNW_004936481:18,903,153...18,928,195
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3057054|PMID:15383658) MGI
Ensembl
PMID:15383658 GO_REF:0000107 MGI:3057054 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439432|PMID:20212154) MGI
Ensembl
PMID:20212154 GO_REF:0000107 MGI:4439432 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,420,850...8,425,996
Ensembl chrNW_004936470:8,420,732...8,425,884
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3057054|PMID:15383658) MGI
Ensembl
PMID:15383658 GO_REF:0000107 MGI:3057054 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,867,182...5,911,207
Ensembl chrNW_004936557:5,867,211...5,911,213
JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:21131359)
(MGI:5816445|PMID:21131359)
ParkinsonsUK-UCL PMID:21131359 MGI:5816445 NCBI chrNW_004936541:2,381,411...2,479,984 JBrowse link
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936602:968,159...980,452
Ensembl chrNW_004936602:956,784...967,884
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20467439) Ensembl
MGI
PMID:20467439 GO_REF:0000107 NCBI chrNW_004936580:803,452...806,966
Ensembl chrNW_004936580:804,903...806,796
JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor involved_in ISO (PMID:24726359) UniProt PMID:24726359 NCBI chrNW_004937104:132,692...160,965 JBrowse link
G Mcm7 minichromosome maintenance complex component 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:238,573...246,746
Ensembl chrNW_004936543:233,960...246,746
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:13,072,791...13,108,392
Ensembl chrNW_004936485:13,072,600...13,108,411
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO (PMID:22771115)
(MGI:5437561|PMID:22771120)
UniProt PMID:22771115 PMID:22771120 MGI:5437561 NCBI chrNW_004936658:1,657,226...1,734,150 JBrowse link
G Men1 menin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,504,489...4,510,085
Ensembl chrNW_004936599:4,504,397...4,510,555
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:646,835...661,312
Ensembl chrNW_004936880:644,079...661,544
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1203882|PMID:9560238), (MGI:1353727|PMID:10657972) RGD
Ensembl
MGI
PMID:9560238 PMID:10657972 PMID:12815001 GO_REF:0000107 MGI:1203882 MGI:1353727 RGD:2316926 NCBI chrNW_004936486:16,744,607...16,923,209
Ensembl chrNW_004936486:16,744,570...16,923,543
JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2678630|PMID:14562041), (MGI:3607956|PMID:16204034)
(MGI:1203882|PMID:9560238), (MGI:1353727|PMID:10657972)
MGI
UniProt
Ensembl
PMID:9560238 PMID:10657972 PMID:14562041 PMID:16204034 GO_REF:0000043 GO_REF:0000107 MGI:1203882 MGI:1353727 MGI:2678630 MGI:3607956 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mlh3 mutL homolog 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3607956|PMID:16204034) MGI
Ensembl
UniProt
PMID:16204034 GO_REF:0000043 GO_REF:0000107 MGI:3607956 NCBI chrNW_004936488:4,164,322...4,195,408
Ensembl chrNW_004936488:4,164,918...4,195,517
JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936636:2,191,748...2,221,027
Ensembl chrNW_004936636:2,191,774...2,220,650
JBrowse link
G Mms22l MMS22 like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936699:486,510...608,532
Ensembl chrNW_004936699:486,491...608,562
JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936740:1,539,648...1,554,608 JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:133,315...171,507
Ensembl chrNW_004936755:130,983...171,492
JBrowse link
G Mpg N-methylpurine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936501:783,408...791,109
Ensembl chrNW_004936501:783,475...791,146
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500065) MGI
Ensembl
UniProt
PMID:17500065 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936674:466,495...528,072
Ensembl chrNW_004936674:466,456...530,317
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004936739:926,678...955,024 JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3029112|PMID:14744764)
(MGI:1334080|PMID:10097137), (MGI:1354621|PMID:10720738), (MGI:2136562|PMID:11429706)
MGI
Ensembl
UniProt
PMID:10097137 PMID:10720738 PMID:11429706 PMID:14744764 GO_REF:0000043 GO_REF:0000107 MGI:1334080 MGI:1354621 MGI:2136562 MGI:3029112 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh3 mutS homolog 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
JBrowse link
G Msh4 mutS homolog 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936571:2,827,283...2,898,562
Ensembl chrNW_004936571:2,822,058...2,898,562
JBrowse link
G Msh5 mutS homolog 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936727:1,776,038...1,794,152
Ensembl chrNW_004936727:1,777,570...1,793,711
JBrowse link
G Msh6 mutS homolog 6 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Mtrex Mtr4 exosome RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,357,637...12,458,728
Ensembl chrNW_004936480:12,357,637...12,458,728
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936599:3,670,759...3,677,375
Ensembl chrNW_004936599:3,670,862...3,677,239
JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936474:26,484,316...26,492,652
Ensembl chrNW_004936474:26,481,211...26,493,019
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439432|PMID:20212154) MGI
Ensembl
PMID:20212154 GO_REF:0000107 MGI:4439432 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISO (PMID:19683501) UniProt PMID:19683501 NCBI chrNW_004936506:6,608,333...6,616,076 JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:632,390...638,900
Ensembl chrNW_004936646:632,121...639,868
JBrowse link
G Nbn nibrin involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500065) MGI
Ensembl
PMID:17500065 GO_REF:0000107 NCBI chrNW_004936561:5,905,905...5,982,824
Ensembl chrNW_004936561:5,906,485...5,982,268
JBrowse link
G Neil1 nei like DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936471:34,184,273...34,192,675
Ensembl chrNW_004936471:34,186,729...34,192,501
JBrowse link
G Neil3 nei like DNA glycosylase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936516:7,739,191...7,781,735
Ensembl chrNW_004936516:7,739,157...7,782,024
JBrowse link
G Nek1 NIMA related kinase 1 acts_upstream_of_or_within ISO (MGI:3522367|PMID:15604234) MGI PMID:15604234 MGI:3522367 NCBI chrNW_004936516:1,508,800...1,666,841
Ensembl chrNW_004936516:1,508,811...1,666,869
JBrowse link
G Nek4 NIMA related kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,499,858...3,527,918
Ensembl chrNW_004936473:3,499,754...3,528,329
JBrowse link
G Nfat5 nuclear factor of activated T cells 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,658,917...19,758,936
Ensembl chrNW_004936475:19,660,201...19,758,930
JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936569:1,494,783...1,578,587
Ensembl chrNW_004936569:1,495,446...1,578,590
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321
JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936661:96,312...176,395
Ensembl chrNW_004936661:95,752...210,097
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:17,473,787...17,519,278
Ensembl chrNW_004936488:17,473,607...17,519,536
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936501:10,957,283...10,979,930
Ensembl chrNW_004936501:10,957,418...10,986,535
JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936486:10,873,690...10,889,064
Ensembl chrNW_004936486:10,873,146...10,887,346
JBrowse link
G Nthl1 nth like DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936694:1,993,443...2,000,323
Ensembl chrNW_004936694:1,993,443...2,000,333
JBrowse link
G Nuggc nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (MGI:5448793|PMID:22833677) MGI PMID:22833677 MGI:5448793 NCBI chrNW_004936675:885,015...931,657
Ensembl chrNW_004936675:885,039...920,253
JBrowse link
G NUPR2 nuclear protein 2, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936543:7,852,069...7,852,363 JBrowse link
G Oard1 O-acyl-ADP-ribose deacylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,751,344...18,757,094
Ensembl chrNW_004936476:18,751,364...18,757,094
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19506022) MGI
Ensembl
PMID:19506022 GO_REF:0000107 NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831
JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:5,154,988...5,163,919
Ensembl chrNW_004936599:5,153,993...5,173,046
JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (MGI:3844416|PMID:19124460) UniProt PMID:19124460 MGI:3844416 NCBI chrNW_004936501:12,657,092...12,660,106
Ensembl chrNW_004936501:12,656,435...12,660,067
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:6,001,126...6,135,663
Ensembl chrNW_004936498:6,001,014...6,086,614
JBrowse link
G Parg poly(ADP-ribose) glycohydrolase acts_upstream_of_or_within ISO (MGI:3052258|PMID:15282315) MGI PMID:15282315 MGI:3052258 NCBI chrNW_004936728:428,028...538,413
Ensembl chrNW_004936728:428,028...541,530
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24550317) MGI
UniProt
Ensembl
RGD
PMID:15857403 PMID:24550317 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1601082 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936877:554,969...564,905
Ensembl chrNW_004936877:554,473...564,903
JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936529:3,291,282...3,297,581
Ensembl chrNW_004936529:3,291,269...3,299,992
JBrowse link
G Paxip1 PAX interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3718866|PMID:17500065) MGI
Ensembl
PMID:17500065 GO_REF:0000107 MGI:3718866 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
JBrowse link
G Paxx PAXX non-homologous end joining factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:951,256...952,804
Ensembl chrNW_004936669:951,261...952,769
JBrowse link
G Pclaf PCNA clamp associated factor involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936471:24,797,291...24,812,196
Ensembl chrNW_004936471:24,797,393...24,808,227
JBrowse link
G Phf1 PHD finger protein 1 involved_in ISO (PMID:23142980) UniProt PMID:23142980 NCBI chrNW_004936476:25,481,938...25,487,026
Ensembl chrNW_004936476:25,479,953...25,487,403
JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936888:565,889...571,273
Ensembl chrNW_004936888:565,912...571,247
JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4868626|PMID:21159655) MGI
Ensembl
PMID:21159655 GO_REF:0000107 MGI:4868626 NCBI chrNW_004936669:2,067,544...2,072,052
Ensembl chrNW_004936669:2,067,612...2,071,788
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936471:25,165,850...25,173,503
Ensembl chrNW_004936471:25,166,325...25,173,535
JBrowse link
G Plk3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,026,878...26,032,098
Ensembl chrNW_004936474:26,026,842...26,032,218
JBrowse link
G Plk5 polo like kinase 5 (inactive) involved_in ISO (MGI:5009782|PMID:20100802) UniProt PMID:20100802 MGI:5009782 NCBI chrNW_004936588:826,473...838,818 JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936506:8,118,816...8,197,040
Ensembl chrNW_004936506:8,119,494...8,197,768
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO (MGI:3607956|PMID:16204034) MGI PMID:16204034 MGI:3607956 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (MGI:5780352|PMID:26774286) UniProt PMID:26774286 MGI:5780352 NCBI chrNW_004936664:3,649,020...3,656,545
Ensembl chrNW_004936664:3,649,833...3,656,035
JBrowse link
G Polb DNA polymerase beta involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936889:231,373...250,985
Ensembl chrNW_004936889:231,373...250,987
Ensembl chrNW_004936889:231,373...250,987
JBrowse link
G Polh DNA polymerase eta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936476:16,400,026...16,434,538
Ensembl chrNW_004936476:16,401,517...16,429,287
JBrowse link
G Poli DNA polymerase iota involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936497:9,490,048...9,512,475
Ensembl chrNW_004936497:9,487,917...9,512,436
JBrowse link
G Polk DNA polymerase kappa involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936549:1,199,810...1,261,889 JBrowse link
G Poll DNA polymerase lambda involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936600:4,184,979...4,194,596
Ensembl chrNW_004936600:4,185,046...4,194,618
JBrowse link
G Polq DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199
JBrowse link
G Prap1 proline rich acidic protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,477,278...19,480,387
Ensembl chrNW_004936486:19,477,453...19,480,297
JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936581:2,031,894...2,042,294
Ensembl chrNW_004936581:2,031,822...2,042,424
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3758537|PMID:12460542) MGI
Ensembl
PMID:12460542 GO_REF:0000107 MGI:3758537 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Psme4 proteasome activator subunit 4 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936491:404,921...503,783
Ensembl chrNW_004936491:404,912...504,326
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:6,620,325...6,626,328
Ensembl chrNW_004936518:6,620,325...6,628,393
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056035|PMID:15297881) MGI
UniProt
Ensembl
PMID:15297881 GO_REF:0000043 GO_REF:0000107 MGI:3056035 NCBI chrNW_004936480:216,216...252,178
Ensembl chrNW_004936480:216,208...252,070
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2448116|PMID:12509447)
(PMID:25023518)
MGI
Ensembl
UniProt
PMID:12509447 PMID:25023518 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 MGI:2448116 NCBI chrNW_004936602:4,030,353...4,134,119
Ensembl chrNW_004936602:4,030,459...4,081,931
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667287|PMID:12815074) MGI
UniProt
Ensembl
PMID:12815074 GO_REF:0000043 GO_REF:0000107 MGI:2667287 NCBI chrNW_004936659:2,001,356...2,007,520
Ensembl chrNW_004936659:2,001,301...2,010,215
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667287|PMID:12815074) MGI
Ensembl
UniProt
PMID:12815074 GO_REF:0000043 GO_REF:0000107 MGI:2667287 NCBI chrNW_004936559:5,224,679...5,264,853
Ensembl chrNW_004936559:5,226,223...5,264,491
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in
acts_upstream_of_or_within
ISO
IEA
cyclophosphamide
(PMID:17500065)
RGD
Ensembl
MGI
PMID:11056294 PMID:17500065 GO_REF:0000107 RGD:727220 NCBI chrNW_004936647:2,546,100...2,637,524
Ensembl chrNW_004936647:2,543,599...2,637,846
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:26681308)
(PMID:17996710), (PMID:17996711), (PMID:23509288), (PMID:25585578), (PMID:27239033)
UniProt PMID:17996710 PMID:17996711 PMID:23509288 PMID:25585578 PMID:26681308 More... NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996710), (PMID:17996711) UniProt PMID:17996710 PMID:17996711 NCBI chrNW_004936606:4,697,369...4,716,006 JBrowse link
G Rad51d RAD51 paralog D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5050390|PMID:20813759) MGI
UniProt
Ensembl
PMID:20813759 GO_REF:0000043 GO_REF:0000107 MGI:5050390 NCBI chrNW_004936538:119,409...132,830
Ensembl chrNW_004936538:119,326...134,758
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19506022) MGI
UniProt
PMID:19506022 GO_REF:0000043 NCBI chrNW_004936606:1,070,336...1,099,684
Ensembl chrNW_004936606:1,066,905...1,099,703
JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3615835|PMID:16428451)
(MGI:3836659|PMID:19061978)
MGI
Ensembl
PMID:16428451 PMID:19061978 GO_REF:0000107 MGI:3615835 MGI:3836659 NCBI chrNW_004936544:7,375,566...7,475,319
Ensembl chrNW_004936544:7,373,508...7,475,353
JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3615835|PMID:16428451)
(MGI:3836659|PMID:19061978)
MGI
Ensembl
PMID:16428451 PMID:19061978 GO_REF:0000107 MGI:3615835 MGI:3836659 NCBI chrNW_004936474:27,276,570...27,316,427
Ensembl chrNW_004936474:27,280,573...27,316,428
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,348,869...2,353,907
Ensembl chrNW_004936599:2,345,646...2,354,029
JBrowse link
G Rassf1 Ras association domain family member 1 involved_in ISO (PMID:18566590) UniProt PMID:18566590 NCBI chrNW_004936529:1,857,177...1,866,198
Ensembl chrNW_004936529:1,857,145...1,867,260
JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500065) MGI
Ensembl
PMID:17500065 GO_REF:0000107 NCBI chrNW_004936557:7,260,342...7,291,721
Ensembl chrNW_004936557:7,260,290...7,291,721
JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,966,074...8,997,027
Ensembl chrNW_004936501:8,966,068...8,998,000
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936552:3,291,727...3,304,332
Ensembl chrNW_004936552:3,291,755...3,304,332
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835
JBrowse link
G Rev1 REV1 DNA directed polymerase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936661:1,322,907...1,397,990
Ensembl chrNW_004936661:1,333,577...1,398,227
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936679:65,852...183,820
Ensembl chrNW_004936679:65,769...222,984
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,544,974...23,586,716
Ensembl chrNW_004936475:23,544,953...23,586,740
JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,045,500...26,105,980
Ensembl chrNW_004936469:26,048,953...26,105,997
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:19500350), (PMID:20550933), (PMID:22373579), (PMID:22508508), (PMID:22980979) UniProt PMID:19500350 PMID:20550933 PMID:22373579 PMID:22508508 PMID:22980979 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf169 ring finger protein 169 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:3,675,075...3,783,514
Ensembl chrNW_004936498:3,685,572...3,776,466
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:20550933), (PMID:21911360), (PMID:22266820), (PMID:22373579), (PMID:22980979)
(MGI:5293246|PMID:21857671)
UniProt PMID:20550933 PMID:21857671 PMID:21911360 PMID:22266820 PMID:22373579 More... MGI:5293246 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Rpa1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936498:4,198,189...4,204,531
Ensembl chrNW_004936498:4,198,130...4,204,528
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936514:10,920,979...10,954,483
Ensembl chrNW_004936514:10,922,322...10,954,402
JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936798:559,706...572,710
Ensembl chrNW_004936798:559,778...572,506
JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036
JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23509280) MGI
Ensembl
PMID:23509280 GO_REF:0000107 NCBI chrNW_004936535:8,094,479...8,143,108
Ensembl chrNW_004936535:8,094,178...8,137,580
JBrowse link
G Setx senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:18,858,384...18,945,253
Ensembl chrNW_004936487:18,855,744...18,944,158
JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (MGI:5050390|PMID:20813759) MGI PMID:20813759 MGI:5050390 NCBI chrNW_004936474:17,776,490...17,791,966 JBrowse link
G Sfr1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936600:2,034,023...2,049,131
Ensembl chrNW_004936600:2,041,170...2,049,357
JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 acts_upstream_of_or_within ISO (MGI:3057054|PMID:15383658) MGI PMID:15383658 MGI:3057054 NCBI chrNW_004936560:1,979,804...2,009,167
Ensembl chrNW_004936560:1,979,808...2,088,329
JBrowse link
G Shprh SNF2 histone linker PHD RING helicase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25023518) MGI
Ensembl
PMID:25023518 GO_REF:0000107 NCBI chrNW_004936625:533,870...617,936
Ensembl chrNW_004936625:533,849...617,907
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Sirt4 sirtuin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:628,875...633,425
Ensembl chrNW_004936668:626,938...633,466
JBrowse link
G Sirt7 sirtuin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,418,331...5,425,050
Ensembl chrNW_004936594:5,418,796...5,424,988
JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936523:8,563,662...8,634,576
Ensembl chrNW_004936523:8,563,410...8,634,585
JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,715,504...4,766,273
Ensembl chrNW_004936600:4,721,327...4,765,915
JBrowse link
G Slx1a SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936501:12,332,135...12,335,081 JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936694:720,585...744,477
Ensembl chrNW_004936694:722,481...744,600
JBrowse link
G Smarcal1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:828,661...887,988
Ensembl chrNW_004936586:828,650...888,047
JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:6,388,556...6,483,293
Ensembl chrNW_004936503:6,388,487...6,483,333
JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:13,191,389...13,250,788
Ensembl chrNW_004936493:13,191,455...13,252,578
JBrowse link
G Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:4,672,871...4,753,749
Ensembl chrNW_004936501:4,672,866...4,753,739
JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936512:11,395,513...11,416,426
Ensembl chrNW_004936512:11,395,834...11,402,377
JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISO (PMID:21264221) UniProt PMID:21264221 NCBI chrNW_004936482:15,178,667...15,262,897 JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:3,937,297...3,967,884
Ensembl chrNW_004936493:3,935,146...3,969,053
JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:4,921,755...5,041,573
Ensembl chrNW_004936590:4,921,542...5,316,195
JBrowse link
G Spindoc spindlin interactor and repressor of chromatin binding involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:5,299,590...5,310,663
Ensembl chrNW_004936599:5,301,537...5,310,553
JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936484:19,391,685...19,402,938
Ensembl chrNW_004936484:19,391,420...19,402,944
JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936581:5,148,108...5,157,630
Ensembl chrNW_004936581:5,148,050...5,157,667
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654
JBrowse link
G Stxbp4 syntaxin binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:7,406,130...7,553,389
Ensembl chrNW_004936490:7,406,124...7,554,118
JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936880:511,699...545,364
Ensembl chrNW_004936880:508,244...545,369
JBrowse link
G Susd6 sushi domain containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,809,720...12,910,792
Ensembl chrNW_004936495:12,809,663...12,910,859
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23509280) MGI
Ensembl
PMID:23509280 GO_REF:0000107 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091
JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936487:15,814,463...15,822,783
Ensembl chrNW_004936487:15,814,102...15,823,311
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Tank TRAF family member associated NFKB activator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,665,604...17,754,845
Ensembl chrNW_004936469:17,665,593...17,742,422
JBrowse link
G Taok1 TAO kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,531,639...5,668,119
Ensembl chrNW_004936538:5,531,633...5,659,239
JBrowse link
G Taok2 TAO kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,477,032...12,495,298
Ensembl chrNW_004936501:12,477,032...12,495,501
JBrowse link
G Taok3 TAO kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,116,804...2,305,331
Ensembl chrNW_004936668:2,222,866...2,304,151
JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936488:17,237,002...17,311,325
Ensembl chrNW_004936488:17,236,703...17,311,310
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:4,518,525...4,540,109
Ensembl chrNW_004936606:4,518,584...4,540,114
JBrowse link
G Timeless timeless circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:780,021...792,856
Ensembl chrNW_004936646:780,087...792,837
JBrowse link
G Tipin TIMELESS interacting protein involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936471:26,516,511...26,531,403
Ensembl chrNW_004936471:26,517,042...26,531,410
JBrowse link
G Tlk2 tousled like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:3,303,563...3,422,093
Ensembl chrNW_004936541:3,302,872...3,423,058
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,788,713...6,841,824
Ensembl chrNW_004936529:6,788,187...6,841,888
JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578084|PMID:15735665) MGI
Ensembl
PMID:15735665 GO_REF:0000107 MGI:3578084 NCBI chrNW_004936524:1,219,101...1,229,937
Ensembl chrNW_004936524:1,219,907...1,229,723
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3691523|PMID:11092819)
(PMID:14744935)
(MGI:3720993|PMID:17591690)
(MGI:3032464|PMID:14744935), (MGI:3057054|PMID:15383658)
(MGI:2675761|PMID:12952892)
MGI
Ensembl
PMID:11092819 PMID:12952892 PMID:14744935 PMID:15383658 PMID:17591690 GO_REF:0000107 MGI:2675761 MGI:3032464 MGI:3057054 MGI:3691523 MGI:3720993 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500065) MGI
UniProt
Ensembl
PMID:17500065 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
G Tp63 tumor protein p63 involved_in ISO (PMID:19451233) UniProt PMID:19451233 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3612718|PMID:16044147) MGI
Ensembl
PMID:16044147 GO_REF:0000107 MGI:3612718 NCBI chrNW_004936737:171,894...211,464
Ensembl chrNW_004936737:172,467...211,464
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120
JBrowse link
G Traip TRAF interacting protein involved_in ISO (PMID:26711499), (PMID:27462463) UniProt PMID:26711499 PMID:27462463 NCBI chrNW_004936529:1,434,629...1,466,382 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5014018|PMID:20511593) MGI
Ensembl
PMID:20511593 GO_REF:0000107 MGI:5014018 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936525:6,539,234...6,690,457
Ensembl chrNW_004936525:6,539,191...6,690,457
JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:504,406...520,295
Ensembl chrNW_004936877:501,743...520,316
JBrowse link
G Uba1 ubiquitin like modifier activating enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:12,961,236...12,984,235
Ensembl chrNW_004936502:12,969,145...12,984,238
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:891,357...913,963
Ensembl chrNW_004936647:891,996...911,033
JBrowse link
G Ube2e2 ubiquitin conjugating enzyme E2 E2 acts_upstream_of_or_within ISO (PMID:21628527) MGI PMID:21628527 NCBI chrNW_004936473:14,988,802...15,280,650 JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:2,222,317...2,226,725
Ensembl chrNW_004936567:2,222,317...2,226,678
JBrowse link
G Ubqln4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,299,864...5,316,583
Ensembl chrNW_004936580:5,301,389...5,315,756
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:41,222,782...41,345,755
Ensembl chrNW_004936470:41,252,951...41,344,134
JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:30886146) UniProt PMID:30886146 NCBI chrNW_004936699:1,131,385...1,163,310
Ensembl chrNW_004936699:1,129,344...1,163,530
JBrowse link
G Ung uracil DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936641:3,308,121...3,350,476
Ensembl chrNW_004936641:3,307,931...3,350,517
JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:12,963,811...12,989,024
Ensembl chrNW_004936500:12,964,122...12,989,152
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936612:742,777...804,919
Ensembl chrNW_004936612:742,725...804,921
JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,483,898...6,596,136
Ensembl chrNW_004936528:6,481,507...6,595,771
JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:1,115,524...1,119,083
Ensembl chrNW_004936819:1,116,447...1,118,558
JBrowse link
G Vav3 vav guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936731:417,610...767,427
Ensembl chrNW_004936731:417,322...767,429
JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466
JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:7,352,043...7,376,023
Ensembl chrNW_004936496:7,352,018...7,376,964
JBrowse link
G Vrk1 VRK serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936604:1,011,048...1,097,388
Ensembl chrNW_004936604:1,011,052...1,097,403
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936613:2,793,706...2,862,984
Ensembl chrNW_004936613:2,794,732...2,865,913
JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5547894|PMID:24001775) MGI
Ensembl
PMID:24001775 GO_REF:0000107 MGI:5547894 NCBI chrNW_004936473:28,307,913...28,351,727
Ensembl chrNW_004936473:28,307,875...28,354,279
JBrowse link
G Wdr76 WD repeat domain 76 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,878,350...6,923,951
Ensembl chrNW_004936471:6,878,584...6,923,921
JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936792:862,659...1,005,065
Ensembl chrNW_004936792:862,383...1,005,755
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936633:3,853,201...3,873,983
Ensembl chrNW_004936633:3,853,058...3,874,121
JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936524:6,467,365...6,493,556
Ensembl chrNW_004936524:6,465,104...6,493,610
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3034118|PMID:15010313) MGI
Ensembl
UniProt
PMID:15010313 GO_REF:0000043 GO_REF:0000107 MGI:3034118 NCBI chrNW_004936602:118,173...139,884
Ensembl chrNW_004936602:118,188...139,675
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO RGD PMID:11056294 RGD:727220 NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613277|PMID:15979950)
(MGI:3652689|PMID:16777961)
MGI
Ensembl
PMID:15979950 PMID:16777961 GO_REF:0000107 MGI:3613277 MGI:3652689 NCBI chrNW_004936527:7,760,609...7,785,360
Ensembl chrNW_004936527:7,760,719...7,785,391
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936586:1,055,478...1,137,924
Ensembl chrNW_004936586:1,055,335...1,137,984
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613277|PMID:15979950) MGI
UniProt
PMID:15979950 GO_REF:0000043 MGI:3613277 NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119)
(MGI:5009388|PMID:18026119)
UniProt PMID:18026119 MGI:5009388 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) UniProt PMID:24657165 NCBI chrNW_004936495:8,212,136...8,238,876 JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:3,207,044...3,263,373
Ensembl chrNW_004936540:3,198,254...3,262,475
JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 involved_in ISO (PMID:19448668) UniProt PMID:19448668 NCBI chrNW_004936595:736,873...753,386 JBrowse link
G Zbtb40 zinc finger and BTB domain containing 40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,848,735...7,926,506
Ensembl chrNW_004936474:7,848,750...7,928,396
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528
JBrowse link
G Zdhhc16 zinc finger DHHC-type palmitoyltransferase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,221,254...2,230,587
Ensembl chrNW_004936636:2,221,255...2,230,641
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583382|PMID:15980864), (MGI:3789238|PMID:16079796), (MGI:5013521|PMID:21522133) MGI
Ensembl
PMID:15980864 PMID:16079796 PMID:21522133 GO_REF:0000107 MGI:3583382 MGI:3789238 MGI:5013521 NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986
JBrowse link
G Znf385a zinc finger protein 385A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,562,635...11,585,026
Ensembl chrNW_004936512:11,561,435...11,585,402
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,328,850...40,558,797
Ensembl chrNW_004936469:40,328,787...40,609,533
JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:666,545...669,351
Ensembl chrNW_004936877:666,523...669,338
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,843,867...9,884,248
Ensembl chrNW_004936521:9,843,900...9,883,932
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690
JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936581:1,328,685...1,332,713
Ensembl chrNW_004936581:1,328,685...1,332,728
JBrowse link
G Hmga1 high mobility group AT-hook 1 involved_in ISO (PMID:19465398) UniProt PMID:19465398 NCBI chrNW_004936476:24,795,854...24,803,138
Ensembl chrNW_004936476:24,795,877...24,801,567
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3722031|PMID:17803946) UniProt PMID:17803946 MGI:3722031 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:478,978...622,818
Ensembl chrNW_004936751:478,300...622,820
JBrowse link
G Lig1 DNA ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,242,916...2,276,286
Ensembl chrNW_004936664:2,242,897...2,276,715
JBrowse link
G Mpg N-methylpurine DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2181327|PMID:9371767)
(MGI:3028824|PMID:15177041)
MGI
Ensembl
InterPro
PMID:9371767 PMID:15177041 GO_REF:0000002 GO_REF:0000107 MGI:2181327 MGI:3028824 NCBI chrNW_004936501:783,408...791,109
Ensembl chrNW_004936501:783,475...791,146
JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936474:26,484,316...26,492,652
Ensembl chrNW_004936474:26,481,211...26,493,019
JBrowse link
G Neil1 nei like DNA glycosylase 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936471:34,184,273...34,192,675
Ensembl chrNW_004936471:34,186,729...34,192,501
JBrowse link
G Neil3 nei like DNA glycosylase 3 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936516:7,739,191...7,781,735
Ensembl chrNW_004936516:7,739,157...7,782,024
JBrowse link
G Nthl1 nth like DNA glycosylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936694:1,993,443...2,000,323
Ensembl chrNW_004936694:1,993,443...2,000,333
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:894433|PMID:9207108)
(MGI:1349233|PMID:10570187)
RGD
Ensembl
InterPro
MGI
PMID:9207108 PMID:9801319 PMID:10570187 GO_REF:0000002 GO_REF:0000107 MGI:1349233 MGI:894433 RGD:729091 NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (MGI:2181257|PMID:11948190) MGI PMID:11948190 MGI:2181257 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2181257|PMID:11948190) MGI
Ensembl
PMID:11948190 GO_REF:0000107 MGI:2181257 NCBI chrNW_004936877:554,969...564,905
Ensembl chrNW_004936877:554,473...564,903
JBrowse link
G Polb DNA polymerase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Polq DNA polymerase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199
JBrowse link
G Rpa1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Rpa2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,127,026...12,147,120
Ensembl chrNW_004936474:12,126,245...12,147,130
JBrowse link
G Rpa3 replication protein A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:2,267,113...2,270,635
Ensembl chrNW_004936585:2,266,706...2,272,259
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936512:11,395,513...11,416,426
Ensembl chrNW_004936512:11,395,834...11,402,377
JBrowse link
G Tdg thymine DNA glycosylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,476,472...10,506,144
Ensembl chrNW_004936492:10,475,183...10,497,151
JBrowse link
G Ung uracil DNA glycosylase involved_in ISO
IEA
RGD
UniProt
InterPro
PMID:12167490 GO_REF:0000002 GO_REF:0000104 RGD:634481 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,483,898...6,596,136
Ensembl chrNW_004936528:6,481,507...6,595,771
JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936792:862,659...1,005,065
Ensembl chrNW_004936792:862,383...1,005,755
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO
IEA
RGD
Ensembl
InterPro
PMID:17412650 GO_REF:0000002 GO_REF:0000107 RGD:2302580 NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc5 ERCC excision repair 5, endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:8,209,482...8,234,696
Ensembl chrNW_004936472:8,209,540...8,234,334
JBrowse link
G Nthl1 nth like DNA glycosylase 1 involved_in IEA InterPro
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936694:1,993,443...2,000,323
Ensembl chrNW_004936694:1,993,443...2,000,333
JBrowse link
G Tdg thymine DNA glycosylase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936492:10,476,472...10,506,144
Ensembl chrNW_004936492:10,475,183...10,497,151
JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ung uracil DNA glycosylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
base-excision repair, DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig3 DNA ligase 3 involved_in ISO
IEA
RGD
Ensembl
PMID:17412650 GO_REF:0000107 RGD:2302580 NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen acts_upstream_of_or_within ISO (MGI:3045901|PMID:15177179) MGI PMID:15177179 MGI:3045901 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3045901|PMID:15177179) RGD
Ensembl
MGI
PMID:15177179 PMID:17412650 GO_REF:0000107 MGI:3045901 RGD:2302580 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3045901|PMID:15177179) MGI
Ensembl
PMID:15177179 GO_REF:0000107 MGI:3045901 NCBI chrNW_004936889:231,373...250,985
Ensembl chrNW_004936889:231,373...250,987
Ensembl chrNW_004936889:231,373...250,987
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936660:2,575,255...2,622,867
Ensembl chrNW_004936660:2,575,360...2,622,852
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15177179) MGI
Ensembl
PMID:15177179 GO_REF:0000107 NCBI chrNW_004936483:15,178,947...15,196,277
Ensembl chrNW_004936483:15,179,342...15,195,258
JBrowse link
G Poll DNA polymerase lambda involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,184,979...4,194,596
Ensembl chrNW_004936600:4,185,046...4,194,618
JBrowse link
DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679752|PMID:12937170) MGI
Ensembl
PMID:12937170 GO_REF:0000107 MGI:2679752 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679752|PMID:12937170) MGI
Ensembl
PMID:12937170 GO_REF:0000107 MGI:2679752 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898
JBrowse link
G Atrip ATR interacting protein involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:245,134...264,456
Ensembl chrNW_004936529:245,092...264,351
JBrowse link
G Cdc5l cell division cycle 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:15,647,470...15,698,095
Ensembl chrNW_004936476:15,648,678...15,698,106
JBrowse link
G Chek1 checkpoint kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2449744|PMID:12529385)
(MGI:1860049|PMID:10859164)
MGI
Ensembl
InterPro
PMID:10859164 PMID:12529385 GO_REF:0000002 GO_REF:0000107 MGI:1860049 MGI:2449744 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
G Chek2 checkpoint kinase 2 ISO RGD PMID:10435585 RGD:633752 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Clspn claspin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,267,740...18,304,658
Ensembl chrNW_004936474:18,268,984...18,300,211
JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,712,168...8,720,728
Ensembl chrNW_004936500:8,712,205...8,739,953
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936588:1,288,447...1,332,489
Ensembl chrNW_004936588:1,288,392...1,330,297
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,844,778...8,853,442
Ensembl chrNW_004936536:8,844,575...8,851,146
JBrowse link
G E2f1 E2F transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,894,827...6,901,058
Ensembl chrNW_004936561:6,896,063...6,900,026
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:3,423,792...3,527,089
Ensembl chrNW_004936471:3,423,813...3,526,913
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690
JBrowse link
G Hinfp histone H4 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,072,771...4,083,973
Ensembl chrNW_004936542:4,072,624...4,084,064
JBrowse link
G Hus1 HUS1 checkpoint clamp component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2449744|PMID:12529385) MGI
Ensembl
InterPro
PMID:12529385 GO_REF:0000002 GO_REF:0000107 MGI:2449744 NCBI chrNW_004936478:22,393,952...22,414,349
Ensembl chrNW_004936478:22,400,111...22,414,115
JBrowse link
G Ints7 integrator complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,389,728...1,456,397
Ensembl chrNW_004936557:1,389,728...1,457,042
JBrowse link
G LOC101966907 histone H2AX NOT|acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179182|PMID:11934988) MGI
Ensembl
PMID:11934988 GO_REF:0000107 MGI:2179182 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:3,029,942...3,203,319
Ensembl chrNW_004936509:3,029,979...3,202,796
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679752|PMID:12937170) MGI
Ensembl
PMID:12937170 GO_REF:0000107 MGI:2679752 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Nbn nibrin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12529385) MGI
Ensembl
PMID:12529385 GO_REF:0000107 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,806,824...8,845,099
Ensembl chrNW_004936536:8,806,818...8,840,746
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:2,031,894...2,042,294
Ensembl chrNW_004936581:2,031,822...2,042,424
JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679752|PMID:12937170) MGI
Ensembl
PMID:12937170 GO_REF:0000107 MGI:2679752 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936518:6,620,325...6,626,328
Ensembl chrNW_004936518:6,620,325...6,628,393
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936480:216,216...252,178
Ensembl chrNW_004936480:216,208...252,070
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936599:2,348,869...2,353,907
Ensembl chrNW_004936599:2,345,646...2,354,029
JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936558:3,462,187...3,489,741
Ensembl chrNW_004936558:3,459,223...3,489,413
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936606:3,201,540...3,208,019
Ensembl chrNW_004936606:3,201,504...3,208,342
JBrowse link
G Tipin TIMELESS interacting protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3706226|PMID:17141802) MGI
Ensembl
PMID:17141802 GO_REF:0000107 MGI:3706226 NCBI chrNW_004936471:26,516,511...26,531,403
Ensembl chrNW_004936471:26,517,042...26,531,410
JBrowse link
G Tiprl TOR signaling pathway regulator involved_in ISO (PMID:17384681) UniProt PMID:17384681 NCBI chrNW_004936481:18,050,020...18,072,906 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3818783|PMID:18045533) MGI
Ensembl
PMID:18045533 GO_REF:0000107 MGI:3818783 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936699:1,131,385...1,163,310
Ensembl chrNW_004936699:1,129,344...1,163,530
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:18662541) UniProt PMID:18662541 NCBI chrNW_004936612:742,777...804,919
Ensembl chrNW_004936612:742,725...804,921
JBrowse link
DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409
JBrowse link
G Atrx ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,607,716...4,631,237
Ensembl chrNW_004936488:4,607,716...4,631,283
JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,410,848...1,427,822
Ensembl chrNW_004936706:1,416,249...1,427,407
JBrowse link
G E2f7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:5,206,135...5,245,324
Ensembl chrNW_004936568:5,206,135...5,244,450
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3057054|PMID:15383658) MGI
Ensembl
PMID:15383658 GO_REF:0000107 MGI:3057054 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837
JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:268,151...299,494
Ensembl chrNW_004936567:268,151...299,494
JBrowse link
G Mif macrophage migration inhibitory factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2670239|PMID:12878730) MGI
Ensembl
PMID:12878730 GO_REF:0000107 MGI:2670239 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442
JBrowse link
G Myo6 myosin VI involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936788:1,125,332...1,264,372
Ensembl chrNW_004936788:1,174,544...1,262,746
JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:16,051,291...16,102,563
Ensembl chrNW_004936470:16,051,015...16,102,585
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5013521|PMID:21522133) MGI
Ensembl
PMID:21522133 GO_REF:0000107 MGI:5013521 NCBI chrNW_004936490:2,139,201...2,183,850
Ensembl chrNW_004936490:2,139,078...2,184,602
JBrowse link
G Sesn2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714678|PMID:17476307)
(MGI:3603875|PMID:16199867)
(MGI:2156961|PMID:11790307), (MGI:3032953|PMID:11884608)
MGI
Ensembl
PMID:11790307 PMID:11884608 PMID:16199867 PMID:17476307 GO_REF:0000107 MGI:2156961 MGI:3032953 MGI:3603875 MGI:3714678 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:500,815...503,158
Ensembl chrNW_004936668:500,813...503,148
JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:3,308,121...3,350,476
Ensembl chrNW_004936641:3,307,931...3,350,517
JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:739,325...754,259
Ensembl chrNW_004936527:739,281...754,331
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936507:10,077,345...10,264,705
Ensembl chrNW_004936507:10,098,171...10,264,716
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:21726810) UniProt PMID:21726810 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chrNW_004936580:4,691,870...4,694,092 JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in ISO (PMID:10891498) UniProt PMID:10891498 NCBI chrNW_004936529:3,304,171...3,308,422
Ensembl chrNW_004936529:3,300,712...3,308,288
JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:565,889...571,273
Ensembl chrNW_004936888:565,912...571,247
JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
G Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma involved_in ISO (PMID:17245430) UniProt PMID:17245430 NCBI chrNW_004936835:54,478...192,486
Ensembl chrNW_004936835:96,930...192,756
JBrowse link
G Prap1 proline rich acidic protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,477,278...19,480,387
Ensembl chrNW_004936486:19,477,453...19,480,297
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chrNW_004936530:227,266...249,285 JBrowse link
G Rpl26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,603,913...1,609,125
Ensembl chrNW_004936595:1,603,413...1,609,132
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589512|PMID:16107883) MGI
Ensembl
PMID:16107883 GO_REF:0000107 MGI:3589512 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:84760|PMID:8738145) MGI PMID:8738145 MGI:84760 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354114|PMID:10710310) MGI
Ensembl
PMID:10710310 GO_REF:0000107 MGI:1354114 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354114|PMID:10710310) MGI
Ensembl
PMID:10710310 GO_REF:0000107 MGI:1354114 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Foxm1 forkhead box M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:3,185,289...3,198,427
Ensembl chrNW_004936606:3,185,982...3,198,378
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327
JBrowse link
G Ing4 inhibitor of growth family member 4 involved_in ISO (PMID:16387653) UniProt PMID:16387653 NCBI chrNW_004936709:1,140,485...1,147,982
Ensembl chrNW_004936709:1,140,345...1,149,843
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chrNW_004936580:4,691,870...4,694,092 JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chrNW_004936530:227,266...249,285 JBrowse link
G Rps27l ribosomal protein S27 like involved_in ISO (PMID:18056458) UniProt PMID:18056458 NCBI chrNW_004936471:23,738,896...23,742,355
Ensembl chrNW_004936471:23,738,823...23,745,382
JBrowse link
G Rps6ka6 ribosomal protein S6 kinase A6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936547:4,846,012...4,952,773
Ensembl chrNW_004936547:4,857,685...4,975,222
JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:14647468) BHF-UCL PMID:14647468 NCBI chrNW_004936525:6,136,343...6,231,051 JBrowse link
G Tfap4 transcription factor AP-4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:210,863...222,531
Ensembl chrNW_004936694:210,672...222,619
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354114|PMID:10710310) MGI
Ensembl
PMID:10710310 GO_REF:0000107 MGI:1354114 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
DNA damage response, signal transduction resulting in transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:538,703...542,901
Ensembl chrNW_004936474:538,625...542,901
JBrowse link
DNA dealkylation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:18603530) UniProt PMID:18603530 NCBI chrNW_004936488:6,459,195...6,486,756 JBrowse link
G Alkbh2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:904,129...908,130
Ensembl chrNW_004936769:904,125...906,881
JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936562:4,743,595...4,777,685
Ensembl chrNW_004936562:4,741,371...4,777,727
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936651:1,952,594...2,291,143
Ensembl chrNW_004936651:1,953,240...2,275,756
JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936475:6,321,725...6,689,410
Ensembl chrNW_004936475:6,321,711...6,689,588
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:50172|PMID:1554415) RGD
Ensembl
MGI
PMID:1554415 PMID:15025514 GO_REF:0000107 MGI:50172 RGD:2316914 NCBI chrNW_004936486:16,744,607...16,923,209
Ensembl chrNW_004936486:16,744,570...16,923,543
JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,194,092...16,295,803
Ensembl chrNW_004936483:16,194,092...16,255,905
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,843,867...9,884,248
Ensembl chrNW_004936521:9,843,900...9,883,932
JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:12,432,752...12,479,807
Ensembl chrNW_004936495:12,432,731...12,479,876
JBrowse link
G LOC101962206 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:21491884) UniProt PMID:21491884 NCBI chrNW_004936577:3,761,078...3,771,864 JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:1,728,848...1,803,992
Ensembl chrNW_004936687:1,729,417...1,803,992
JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:17349954) HGNC-UCL PMID:17349954
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chrNW_004936590:4,637,858...4,670,789
Ensembl chrNW_004936590:4,637,065...4,670,827
JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helq helicase, POLQ like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,224,072...1,265,887
Ensembl chrNW_004936738:1,224,312...1,265,786
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19506022) MGI
Ensembl
PMID:19506022 GO_REF:0000107 NCBI chrNW_004936606:1,070,336...1,099,684
Ensembl chrNW_004936606:1,066,905...1,099,703
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO (PMID:18716619), (PMID:19202191) UniProt PMID:18716619 PMID:19202191 NCBI chrNW_004936550:2,482,915...2,554,077 JBrowse link
G Rnf138 ring finger protein 138 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,173,734...1,206,417
Ensembl chrNW_004936682:1,173,797...1,205,870
JBrowse link
G Slx1a SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) UniProt PMID:19595721 NCBI chrNW_004936501:12,332,135...12,335,081 JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:720,585...744,477
Ensembl chrNW_004936694:722,481...744,600
JBrowse link
DNA ligation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig4 DNA ligase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1312981|PMID:9823897) MGI
Ensembl
InterPro
PMID:9823897 GO_REF:0000002 GO_REF:0000107 MGI:1312981 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,494,783...1,578,587
Ensembl chrNW_004936569:1,495,446...1,578,590
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,649,020...3,656,545
Ensembl chrNW_004936664:3,649,833...3,656,035
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51 RAD51 recombinase involved_in ISO (PMID:26681308) UniProt PMID:26681308 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936606:1,070,336...1,099,684
Ensembl chrNW_004936606:1,066,905...1,099,703
JBrowse link
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936738:1,202,668...1,217,825
Ensembl chrNW_004936738:1,202,608...1,221,321
JBrowse link
G Actr8 actin related protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936473:4,523,865...4,542,476
Ensembl chrNW_004936473:4,525,837...4,542,497
JBrowse link
G Adprs ADP-ribosylserine hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:18,580,615...18,586,325
Ensembl chrNW_004936474:18,580,615...18,586,307
JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936488:6,459,195...6,486,756 JBrowse link
G Alkbh2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936769:904,129...908,130
Ensembl chrNW_004936769:904,125...906,881
JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936562:4,743,595...4,777,685
Ensembl chrNW_004936562:4,741,371...4,777,727
JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) UniProt PMID:27010503 MGI:5800654 NCBI chrNW_004936596:3,568,810...3,573,506
Ensembl chrNW_004936596:3,569,814...3,573,344
JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936877:666,545...669,351
Ensembl chrNW_004936877:666,523...669,338
JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936751:1,807,867...1,817,780
Ensembl chrNW_004936751:1,807,867...1,819,272
JBrowse link
G Aplf aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
JBrowse link
G Aptx aprataxin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936524:1,569,610...1,582,103
Ensembl chrNW_004936524:1,570,627...1,576,329
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11897662) MGI
Ensembl
PMID:11897662 GO_REF:0000107 NCBI chrNW_004936658:1,699,150...1,713,079
Ensembl chrNW_004936658:1,699,044...1,715,582
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3053255|PMID:15364958)
(MGI:3511081|PMID:15542845)
(MGI:2156121|PMID:11679583)
MGI
InterPro
Ensembl
PMID:11679583 PMID:15364958 PMID:15542845 GO_REF:0000002 GO_REF:0000107 MGI:2156121 MGI:3053255 MGI:3511081 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3053255|PMID:15364958) MGI
UniProt
PMID:15364958 GO_REF:0000043 MGI:3053255 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898
JBrowse link
G Atrx ATRX chromatin remodeler involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936493:4,375,393...4,863,050
Ensembl chrNW_004936493:4,375,393...4,768,399
JBrowse link
G Bach1 BTB domain and CNC homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:12,720,027...12,740,717
Ensembl chrNW_004936500:12,717,516...12,740,656
JBrowse link
G Bccip BRCA2 and CDKN1A interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936486:13,816,805...13,831,055 JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3053255|PMID:15364958) MGI
InterPro
PMID:15364958 GO_REF:0000002 MGI:3053255 NCBI chrNW_004936483:16,194,092...16,295,803
Ensembl chrNW_004936483:16,194,092...16,255,905
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936927:341,114...380,817
Ensembl chrNW_004936927:341,253...376,700
JBrowse link
G Cenpx centromere protein X involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936594:5,517,665...5,520,606
Ensembl chrNW_004936594:5,516,915...5,520,553
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936588:2,536,141...2,564,897
Ensembl chrNW_004936588:2,542,265...2,564,962
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1 like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004937024:164,309...216,967
Ensembl chrNW_004937024:164,327...216,851
JBrowse link
G Chek1 checkpoint kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3053255|PMID:15364958) MGI
Ensembl
PMID:15364958 GO_REF:0000107 MGI:3053255 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:10,680,893...10,695,859
Ensembl chrNW_004936514:10,680,859...10,695,865
JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936486:4,199,527...4,221,984
Ensembl chrNW_004936486:4,199,410...4,221,761
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936562:1,960,406...1,974,809
Ensembl chrNW_004936562:1,960,406...1,974,867
JBrowse link
G Dmap1 DNA methyltransferase 1 associated protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:25,486,447...25,495,909
Ensembl chrNW_004936474:25,486,462...25,495,992
JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936492:2,754,694...2,788,249
Ensembl chrNW_004936492:2,753,289...2,788,102
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936521:9,843,867...9,884,248
Ensembl chrNW_004936521:9,843,900...9,883,932
JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936636:3,153,454...3,189,774
Ensembl chrNW_004936636:3,153,569...3,189,774
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936588:1,288,447...1,332,489
Ensembl chrNW_004936588:1,288,392...1,330,297
JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936478:11,671,375...11,787,767
Ensembl chrNW_004936478:11,671,191...11,787,770
JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936492:10,232,140...10,233,557
Ensembl chrNW_004936492:10,232,335...10,233,438
JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936490:11,307,739...11,316,203
Ensembl chrNW_004936490:11,308,393...11,314,785
JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936694:2,217,352...2,220,556
Ensembl chrNW_004936694:2,217,811...2,220,432
JBrowse link
G Endov endonuclease V involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936594:4,332,225...4,345,743
Ensembl chrNW_004936594:4,332,208...4,343,068
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2446381|PMID:12466203)
(PMID:25538220)
MGI
UniProt
Ensembl
InterPro
PMID:12466203 PMID:25538220 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 MGI:2446381 NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179786|PMID:11950998) MGI
Ensembl
PMID:11950998 GO_REF:0000107 MGI:2179786 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:43,970,002...43,998,279
Ensembl chrNW_004936469:43,969,740...43,998,448
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3027419|PMID:14729965) MGI
UniProt
Ensembl
InterPro
PMID:14729965 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 MGI:3027419 NCBI chrNW_004936501:2,301,072...2,329,346
Ensembl chrNW_004936501:2,300,835...2,329,351
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3041918|PMID:15082767) MGI
UniProt
PMID:15082767 GO_REF:0000043 MGI:3041918 NCBI chrNW_004936472:8,209,482...8,234,696
Ensembl chrNW_004936472:8,209,540...8,234,334
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1861042|PMID:10806208)
(MGI:3715683|PMID:17213818), (MGI:3759387|PMID:12447686)
MGI
Ensembl
PMID:10806208 PMID:12447686 PMID:17213818 GO_REF:0000107 MGI:1861042 MGI:3715683 MGI:3759387 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936483:916,377...949,833
Ensembl chrNW_004936483:912,346...949,833
JBrowse link
G Fancc FA complementation group C involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936626:3,980,311...4,147,042
Ensembl chrNW_004936626:3,982,647...4,159,976
JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936602:3,162,177...3,220,468
Ensembl chrNW_004936602:3,161,960...3,209,868
JBrowse link
G Fanci FA complementation group I involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936483:15,096,215...15,179,856
Ensembl chrNW_004936483:15,106,902...15,179,094
JBrowse link
G Fancl FA complementation group L involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:4,057,312...4,119,966
Ensembl chrNW_004936491:4,029,388...4,119,976
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:8,635,752...8,689,949
Ensembl chrNW_004936484:8,635,753...8,689,971
JBrowse link
G Fen1 flap structure-specific endonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2668283|PMID:12861020) MGI
UniProt
PMID:12861020 GO_REF:0000043 MGI:2668283 NCBI chrNW_004936581:1,328,685...1,332,713
Ensembl chrNW_004936581:1,328,685...1,332,728
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856
JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936493:13,157,114...13,182,797
Ensembl chrNW_004936493:13,157,119...13,177,525
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936558:1,176,154...1,196,028
Ensembl chrNW_004936558:1,173,064...1,196,063
JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936837:546,561...552,686
Ensembl chrNW_004936837:546,509...552,754
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936489:9,983,935...9,993,179
Ensembl chrNW_004936489:9,992,156...9,992,938
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO (MGI:5139938|PMID:21746928) MGI PMID:21746928 MGI:5139938 NCBI chrNW_004936546:4,398,003...5,247,649
Ensembl chrNW_004936546:4,781,304...5,246,939
JBrowse link
G Hinfp histone H4 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,072,771...4,083,973
Ensembl chrNW_004936542:4,072,624...4,084,064
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936751:478,978...622,818
Ensembl chrNW_004936751:478,300...622,820
JBrowse link
G Inip INTS3 and NABP interacting protein involved_in IEA InterPro
UniProt
Ensembl
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936559:813,912...830,768
Ensembl chrNW_004936559:813,940...830,763
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936471:4,374,802...4,478,894
Ensembl chrNW_004936471:4,375,395...4,478,899
JBrowse link
G Ints3 integrator complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:3,511,364...3,553,441
Ensembl chrNW_004936580:3,511,311...3,553,756
JBrowse link
G Kif22 kinesin family member 22 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:12,670,717...12,683,999
Ensembl chrNW_004936501:12,670,172...12,684,571
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008
JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286
JBrowse link
G Lig1 DNA ligase 1 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO
IEA
(MGI:4943978|PMID:21390131)
(MGI:2178155|PMID:11896201)
RGD
UniProt
InterPro
MGI
PMID:1730240 PMID:11896201 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 MGI:2178155 MGI:4943978 RGD:724410 NCBI chrNW_004936664:2,242,916...2,276,286
Ensembl chrNW_004936664:2,242,897...2,276,715
JBrowse link
G Lig3 DNA ligase 3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936538:206,179...228,487
Ensembl chrNW_004936538:206,839...226,441
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943978|PMID:21390131)
(MGI:3037169|PMID:11779495)
MGI
UniProt
InterPro
Ensembl
PMID:11779495 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 MGI:3037169 MGI:4943978 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 acts_upstream_of_or_within ISO (MGI:3027215|PMID:14701760) MGI PMID:14701760 MGI:3027215 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G LOC101957203 general transcription factor IIH subunit 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936480:72,730...92,868 JBrowse link
G LOC101959362 peroxisomal membrane protein PEX14 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936623:4,313,186...4,462,462
Ensembl chrNW_004936623:4,313,147...4,462,528
Ensembl chrNW_004936623:4,313,147...4,462,528
JBrowse link
G LOC101966907 histone H2AX acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179182|PMID:11934988)
(MGI:3053255|PMID:15364958)
MGI
Ensembl
PMID:11934988 PMID:15364958 GO_REF:0000107 MGI:2179182 MGI:3053255 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
JBrowse link
G LOC101970824 histone PARylation factor 1 involved_in ISO (PMID:32028527), (PMID:34108479) UniProt PMID:32028527 PMID:34108479 NCBI chrNW_004936516:1,763,935...1,785,538 JBrowse link
G LOC101971629 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603
JBrowse link
G LOC101973038 DNA polymerase kappa-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936895:106,612...107,763 JBrowse link
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936602:968,159...980,452
Ensembl chrNW_004936602:956,784...967,884
JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936485:2,154,446...2,167,633
Ensembl chrNW_004936485:2,153,295...2,166,908
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2677087|PMID:13679151) MGI
UniProt
Ensembl
InterPro
PMID:13679151 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:2677087 NCBI chrNW_004936486:16,744,607...16,923,209
Ensembl chrNW_004936486:16,744,570...16,923,543
JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2677087|PMID:13679151)
(MGI:3513725|PMID:15480418)
MGI
Ensembl
PMID:13679151 PMID:15480418 GO_REF:0000107 MGI:2677087 MGI:3513725 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736
JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936636:2,191,748...2,221,027
Ensembl chrNW_004936636:2,191,774...2,220,650
JBrowse link
G Mms22l MMS22 like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936699:486,510...608,532
Ensembl chrNW_004936699:486,491...608,562
JBrowse link
G Mpg N-methylpurine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936501:783,408...791,109
Ensembl chrNW_004936501:783,475...791,146
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936674:466,495...528,072
Ensembl chrNW_004936674:466,456...530,317
JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667543|PMID:12687013) MGI
Ensembl
UniProt
PMID:12687013 GO_REF:0000043 GO_REF:0000107 MGI:2667543 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Msh3 mutS homolog 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:82,967...275,772
Ensembl chrNW_004936469:83,285...273,561
JBrowse link
G Msh4 mutS homolog 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936571:2,827,283...2,898,562
Ensembl chrNW_004936571:2,822,058...2,898,562
JBrowse link
G Msh6 mutS homolog 6 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936599:3,670,759...3,677,375
Ensembl chrNW_004936599:3,670,862...3,677,239
JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936474:26,484,316...26,492,652
Ensembl chrNW_004936474:26,481,211...26,493,019
JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISO (PMID:19683501) UniProt PMID:19683501 NCBI chrNW_004936506:6,608,333...6,616,076 JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:632,390...638,900
Ensembl chrNW_004936646:632,121...639,868
JBrowse link
G Nbn nibrin involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Neil1 nei like DNA glycosylase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2389521|PMID:12200441) MGI
UniProt
Ensembl
PMID:12200441 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 MGI:2389521 NCBI chrNW_004936471:34,184,273...34,192,675
Ensembl chrNW_004936471:34,186,729...34,192,501
JBrowse link
G Neil3 nei like DNA glycosylase 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936516:7,739,191...7,781,735
Ensembl chrNW_004936516:7,739,157...7,782,024
JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936569:1,494,783...1,578,587
Ensembl chrNW_004936569:1,495,446...1,578,590
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:19188445) UniProt PMID:19188445 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936501:10,957,283...10,979,930
Ensembl chrNW_004936501:10,957,418...10,986,535
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:1,433,119...1,434,506
Ensembl chrNW_004936483:1,433,522...1,434,409
JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936486:10,873,690...10,889,064
Ensembl chrNW_004936486:10,873,146...10,887,346
JBrowse link
G Nthl1 nth like DNA glycosylase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936694:1,993,443...2,000,323
Ensembl chrNW_004936694:1,993,443...2,000,333
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3715683|PMID:17213818), (MGI:3759387|PMID:12447686)
(MGI:2150199|PMID:11532868), (MGI:3715683|PMID:17213818), (MGI:3759387|PMID:12447686)
(MGI:2668786|PMID:12874039)
MGI
Ensembl
InterPro
PMID:11532868 PMID:12447686 PMID:12874039 PMID:17213818 GO_REF:0000002 GO_REF:0000107 MGI:2150199 MGI:2668786 MGI:3715683 MGI:3759387 NCBI chrNW_004936602:3,411,106...3,418,826
Ensembl chrNW_004936602:3,413,282...3,418,831
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936877:554,969...564,905
Ensembl chrNW_004936877:554,473...564,903
JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936529:3,291,282...3,297,581
Ensembl chrNW_004936529:3,291,269...3,299,992
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936471:25,165,850...25,173,503
Ensembl chrNW_004936471:25,166,325...25,173,535
JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO (MGI:3513725|PMID:15480418) MGI PMID:15480418 MGI:3513725 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936664:3,649,020...3,656,545
Ensembl chrNW_004936664:3,649,833...3,656,035
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:3335506)
(PMID:11470886)
UniProt PMID:3335506 PMID:11470886 NCBI chrNW_004936836:1,151...287,438 JBrowse link
G Polb DNA polymerase beta involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936889:231,373...250,985
Ensembl chrNW_004936889:231,373...250,987
Ensembl chrNW_004936889:231,373...250,987
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936478:19,074,871...19,083,624
Ensembl chrNW_004936478:19,072,810...19,083,669
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936660:2,575,255...2,622,867
Ensembl chrNW_004936660:2,575,360...2,622,852
JBrowse link
G Polh DNA polymerase eta involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936476:16,400,026...16,434,538
Ensembl chrNW_004936476:16,401,517...16,429,287
JBrowse link
G Poli DNA polymerase iota involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936497:9,490,048...9,512,475
Ensembl chrNW_004936497:9,487,917...9,512,436
JBrowse link
G Polk DNA polymerase kappa acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445277|PMID:12555660) MGI
UniProt
InterPro
PMID:12555660 GO_REF:0000002 GO_REF:0000043 MGI:2445277 NCBI chrNW_004936549:1,199,810...1,261,889 JBrowse link
G Poll DNA polymerase lambda involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936600:4,184,979...4,194,596
Ensembl chrNW_004936600:4,185,046...4,194,618
JBrowse link
G Polm DNA polymerase mu involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936478:19,032,995...19,042,400
Ensembl chrNW_004936478:19,032,920...19,042,432
JBrowse link
G Poln DNA polymerase nu involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936477:21,268,236...21,396,526
Ensembl chrNW_004936477:21,268,244...21,396,256
JBrowse link
G Polq DNA polymerase theta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2654407|PMID:12663541), (MGI:3511081|PMID:15542845)
(MGI:3511081|PMID:15542845)
MGI
UniProt
Ensembl
PMID:12663541 PMID:15542845 GO_REF:0000107 GO_REF:0000117 MGI:2654407 MGI:3511081 NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936581:2,031,894...2,042,294
Ensembl chrNW_004936581:2,031,822...2,042,424
JBrowse link
G Psme4 proteasome activator subunit 4 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936491:404,921...503,783
Ensembl chrNW_004936491:404,912...504,326
JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:692,436...709,899
Ensembl chrNW_004936588:692,436...709,945
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:6,620,325...6,626,328
Ensembl chrNW_004936518:6,620,325...6,628,393
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936480:216,216...252,178
Ensembl chrNW_004936480:216,208...252,070
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936602:4,030,353...4,134,119
Ensembl chrNW_004936602:4,030,459...4,081,931
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936659:2,001,356...2,007,520
Ensembl chrNW_004936659:2,001,301...2,010,215
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936559:5,224,679...5,264,853
Ensembl chrNW_004936559:5,226,223...5,264,491
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936647:2,546,100...2,637,524
Ensembl chrNW_004936647:2,543,599...2,637,846
JBrowse link
G Rad51 RAD51 recombinase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rad51b RAD51 paralog B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936495:11,185,560...11,762,254
Ensembl chrNW_004936495:11,195,767...11,467,458
JBrowse link
G Rad51c RAD51 paralog C involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936490:4,440,638...4,473,301
Ensembl chrNW_004936490:4,439,097...4,473,357
JBrowse link
G Rad51d RAD51 paralog D involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936538:119,409...132,830
Ensembl chrNW_004936538:119,326...134,758
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936606:1,070,336...1,099,684
Ensembl chrNW_004936606:1,066,905...1,099,703
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936599:2,348,869...2,353,907
Ensembl chrNW_004936599:2,345,646...2,354,029
JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936558:3,462,187...3,489,741
Ensembl chrNW_004936558:3,459,223...3,489,413
JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936541:1,788,266...1,797,410
Ensembl chrNW_004936541:1,788,197...1,797,423
JBrowse link
G Recql5 RecQ like helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:829,296...862,615
Ensembl chrNW_004936594:828,475...862,912
JBrowse link
G Rev1 REV1 DNA directed polymerase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936661:1,322,907...1,397,990
Ensembl chrNW_004936661:1,333,577...1,398,227
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176643|PMID:11884603) MGI
UniProt
Ensembl
InterPro
PMID:11884603 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:2176643 NCBI chrNW_004936679:65,852...183,820
Ensembl chrNW_004936679:65,769...222,984
JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:3,479,778...3,504,938
Ensembl chrNW_004936669:3,481,294...3,491,572
JBrowse link
G Rfc1 replication factor C subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936482:6,938,138...7,009,144
Ensembl chrNW_004936482:6,938,681...6,993,705
JBrowse link
G Rpa1 replication protein A1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Rpa2 replication protein A2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:12,127,026...12,147,120
Ensembl chrNW_004936474:12,126,245...12,147,130
JBrowse link
G Rpa3 replication protein A3 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936585:2,267,113...2,270,635
Ensembl chrNW_004936585:2,266,706...2,272,259
JBrowse link
G Rpain RPA interacting protein acts_upstream_of_or_within ISO (PMID:16135809) MGI PMID:16135809 NCBI chrNW_004936677:2,376,666...2,384,856
Ensembl chrNW_004936677:2,372,813...2,384,773
JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936498:4,198,189...4,204,531
Ensembl chrNW_004936498:4,198,130...4,204,528
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:815,401...848,749
Ensembl chrNW_004936498:815,399...848,793
JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2670318|PMID:12858174) MGI
Ensembl
PMID:12858174 GO_REF:0000107 MGI:2670318 NCBI chrNW_004936470:41,354,387...41,401,308
Ensembl chrNW_004936470:41,354,287...41,401,317
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936514:10,920,979...10,954,483
Ensembl chrNW_004936514:10,922,322...10,954,402
JBrowse link
G Ruvbl1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936798:559,706...572,710
Ensembl chrNW_004936798:559,778...572,506
JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036
JBrowse link
G Sfr1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936600:2,034,023...2,049,131
Ensembl chrNW_004936600:2,041,170...2,049,357
JBrowse link
G Slx1a SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936501:12,332,135...12,335,081 JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936694:720,585...744,477
Ensembl chrNW_004936694:722,481...744,600
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:4,857,816...4,890,266
Ensembl chrNW_004936535:4,856,672...4,890,225
JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936503:6,388,556...6,483,293
Ensembl chrNW_004936503:6,388,487...6,483,333
JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ISO RGD PMID:12718542 RGD:2317001 NCBI chrNW_004936512:11,395,513...11,416,426
Ensembl chrNW_004936512:11,395,834...11,402,377
JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936484:19,391,685...19,402,938
Ensembl chrNW_004936484:19,391,420...19,402,944
JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936581:5,148,108...5,157,630
Ensembl chrNW_004936581:5,148,050...5,157,667
JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936880:511,699...545,364
Ensembl chrNW_004936880:508,244...545,369
JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936487:15,814,463...15,822,783
Ensembl chrNW_004936487:15,814,102...15,823,311
JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943978|PMID:21390131) MGI
InterPro
UniProt
Ensembl
PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:4943978 NCBI chrNW_004936488:17,237,002...17,311,325
Ensembl chrNW_004936488:17,236,703...17,311,310
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3053255|PMID:15364958) MGI
Ensembl
PMID:15364958 GO_REF:0000107 MGI:3053255 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
G Trim28 tripartite motif containing 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937062:126,832...132,938
Ensembl chrNW_004937062:126,708...134,366
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936525:6,539,234...6,690,457
Ensembl chrNW_004936525:6,539,191...6,690,457
JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:10,330,666...10,340,268
Ensembl chrNW_004936479:10,330,632...10,340,367
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:891,357...913,963
Ensembl chrNW_004936647:891,996...911,033
JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:2,222,317...2,226,725
Ensembl chrNW_004936567:2,222,317...2,226,678
JBrowse link
G Ung uracil DNA glycosylase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936769:911,296...922,770
Ensembl chrNW_004936769:910,838...922,726
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,469,444...2,505,688
Ensembl chrNW_004936596:2,468,116...2,505,688
JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936641:3,308,121...3,350,476
Ensembl chrNW_004936641:3,307,931...3,350,517
JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:24,032,644...24,130,543
Ensembl chrNW_004936471:24,035,655...24,130,997
JBrowse link
G Usp45 ubiquitin specific peptidase 45 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25538220) MGI
Ensembl
PMID:25538220 GO_REF:0000107 NCBI chrNW_004936651:1,031,328...1,119,344
Ensembl chrNW_004936651:1,037,804...1,119,399
JBrowse link
G Uvrag UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,555,325...4,869,099
Ensembl chrNW_004936498:4,555,276...4,870,896
JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936792:862,659...1,005,065
Ensembl chrNW_004936792:862,383...1,005,755
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936633:3,853,201...3,873,983
Ensembl chrNW_004936633:3,853,058...3,874,121
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1270007|PMID:9661901), (MGI:2179786|PMID:11950998) MGI
UniProt
Ensembl
PMID:9661901 PMID:11950998 GO_REF:0000043 GO_REF:0000107 MGI:1270007 MGI:2179786 NCBI chrNW_004936524:6,467,365...6,493,556
Ensembl chrNW_004936524:6,465,104...6,493,610
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2445277|PMID:12555660) MGI
UniProt
Ensembl
PMID:12555660 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 MGI:2445277 NCBI chrNW_004936602:118,173...139,884
Ensembl chrNW_004936602:118,188...139,675
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4359093|PMID:19633665) MGI
Ensembl
PMID:19633665 GO_REF:0000107 MGI:4359093 NCBI chrNW_004936706:752,571...783,746
Ensembl chrNW_004936706:751,108...783,777
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936527:7,760,609...7,785,360
Ensembl chrNW_004936527:7,760,719...7,785,391
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936621:1,462,441...1,474,937
Ensembl chrNW_004936621:1,462,428...1,473,868
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936586:1,055,478...1,137,924
Ensembl chrNW_004936586:1,055,335...1,137,984
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) UniProt PMID:24657165 NCBI chrNW_004936495:8,212,136...8,238,876 JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5139938|PMID:21746928)
(MGI:3583382|PMID:15980864), (MGI:5139938|PMID:21746928)
MGI
Ensembl
PMID:15980864 PMID:21746928 GO_REF:0000107 MGI:3583382 MGI:5139938 NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986
JBrowse link
G Znf668 zinc finger protein 668 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,423,491...13,442,329
Ensembl chrNW_004936501:13,422,989...13,426,060
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,328,850...40,558,797
Ensembl chrNW_004936469:40,328,787...40,609,533
JBrowse link
DNA repair-dependent chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO PMID:19282473 UniProt PMID:19282473 RGD:8553580 NCBI chrNW_004936842:452,682...476,533
Ensembl chrNW_004936842:452,681...476,513
JBrowse link
G Aplf aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:1,699,150...1,713,079
Ensembl chrNW_004936658:1,699,044...1,715,582
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in IEA