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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular component disassembly involved in execution phase of apoptosis
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Accession:GO:0006921 term browser browse the term
Definition:The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis.
Synonyms:narrow_synonym: cellular component disassembly involved in apoptosis
 broad_synonym: cellular component disassembly involved in apoptotic process;   disassembly of cell structures


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cellular component disassembly involved in execution phase of apoptosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bok BCL2 family apoptosis regulator BOK involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23429263) 		UniProt
Ensembl
RGD		 PMID:23429263 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:101,670,729...101,681,834
Ensembl chr 9:94,223,389...94,234,476 		JBrowse link
apoptotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:10490026) RGD PMID:10490026 NCBI chr15:32,072,121...32,117,004
Ensembl chr15:28,102,112...28,147,001 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA 		(PMID:10959840)
GO_REF:0000107 		RGD
Ensembl		 PMID:10959840 GO_REF:0000107 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in ISO
IEA 		(PMID:11175748)
GO_REF:0000107 		RGD
Ensembl		 PMID:11175748 GO_REF:0000107 NCBI chr 1:176,726,454...176,743,289
Ensembl chr 1:176,726,454...176,743,289 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IDA PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
G Kdm4a lysine demethylase 4A IMP RGD PMID:24747049 RGD:9587433 NCBI chr 5:136,958,178...137,004,942
Ensembl chr 5:131,672,754...131,719,501 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:10959840) 		Ensembl
GO_Central
RGD		 PMID:10959840 GO_REF:0000033 GO_REF:0000107 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvra biliverdin reductase A acts_upstream_of_or_within ISO (PMID:25239864) RGD PMID:25239864 NCBI chr 3:114,340,778...114,366,048
Ensembl chr 3:114,340,838...114,366,033 		JBrowse link
G Cck cholecystokinin IDA pancreatic acinar cells RGD PMID:11964411 RGD:625521 NCBI chr 8:130,031,012...130,037,702
Ensembl chr 8:121,153,500...121,160,084 		JBrowse link
G Dffa DNA fragmentation factor subunit alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:159,540,715...159,553,639
Ensembl chr 5:159,540,715...159,553,633 		JBrowse link
G Dffb DNA fragmentation factor subunit beta acts_upstream_of_or_within
involved_in 		IDA
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
GO_REF:0000002
(PMID:15572351)
(PMID:22253444) 		Ensembl
GO_Central
InterPro
RGD		 PMID:15572351 PMID:22253444 PMID:11425895 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:628524 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dnase1l3 deoxyribonuclease 1L3 acts_upstream_of_or_within
involved_in 		TAS
IEA
ISO
IBA 		GO_REF:0000107
(PMID:12050166)
GO_REF:0000033
(PMID:23229555) 		Ensembl
RGD
GO_Central		 PMID:12050166 PMID:23229555 PMID:9665719 GO_REF:0000033 GO_REF:0000107, RGD:728743 NCBI chr15:16,922,335...16,948,322
Ensembl chr15:16,922,335...16,948,317 		JBrowse link
G Dnase2 deoxyribonuclease 2, lysosomal involved_in IEA
IBA 		GO_REF:0000104
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr19:23,244,656...23,247,376
Ensembl chr19:23,244,664...23,247,376 		JBrowse link
G Dnase2b deoxyribonuclease 2 beta involved_in IEA
IBA 		GO_REF:0000104
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:235,470,915...235,515,211
Ensembl chr 2:235,470,919...235,486,295 		JBrowse link
G Endog endonuclease G acts_upstream_of_or_within ISO
IEA 		MGI:3034030|MGI:3514265 (PMID:14663139)
GO_REF:0000107 		RGD
Ensembl		 PMID:14663139 GO_REF:0000107 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Exog exo/endonuclease G involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:128,062,688...128,082,529
Ensembl chr 8:119,185,136...119,204,672 		JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:16153597) RGD PMID:16153597 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO 		GO_REF:0000107
MGI:1857091 (PMID:11403940) 		Ensembl
RGD		 PMID:11403940 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
apoptotic nuclear changes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C involved_in IEA
ISO 		GO_REF:0000107
(PMID:15531507) 		Ensembl
RGD		 PMID:15531507 GO_REF:0000107 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Blcap BLCAP, apoptosis inducing factor involved_in ISO
IEA 		(PMID:17031575)
GO_REF:0000107 		RGD
Ensembl		 PMID:17031575 GO_REF:0000107 NCBI chr 3:146,222,699...146,232,859
Ensembl chr 3:146,222,240...146,232,909 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:14707049) RGD PMID:14707049 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO
IEA
ISS 		(PMID:23478299)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:23478299 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA 		MGI:2153356 (PMID:14625552)
GO_REF:0000107 		RGD
Ensembl		 PMID:14625552 GO_REF:0000107 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Dedd2 death effector domain containing 2 involved_in ISO
IEA 		(PMID:11741985)
GO_REF:0000107 		RGD
Ensembl		 PMID:11741985 GO_REF:0000107 NCBI chr 1:80,789,084...80,807,789
Ensembl chr 1:80,792,000...80,807,714 		JBrowse link
G Hnf1a HNF1 homeobox A IMP RGD PMID:20841353 RGD:150540305 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Sharpin SHANK-associated RH domain interactor acts_upstream_of_or_within ISO MGI:1856699 (PMID:7792947) RGD PMID:7792947 NCBI chr 7:108,070,681...108,075,012
Ensembl chr 7:108,070,687...108,074,955 		JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in 		ISO (PMID:15572351)
MGI:2179456 (PMID:10601318), (PMID:14663139)
(PMID:11371636) 		RGD PMID:10601318 PMID:11371636 PMID:14663139 PMID:15572351 NCBI chr 5:159,540,715...159,553,639
Ensembl chr 5:159,540,715...159,553,633 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA 		(PMID:11371636)
GO_REF:0000107 		RGD
Ensembl		 PMID:11371636 GO_REF:0000107 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:159,910,242...159,928,201
Ensembl chr 5:159,910,242...159,928,180 		JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649 		JBrowse link
nuclear fragmentation involved in apoptotic nuclear change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IDA PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in ISO
IEA 		(PMID:11350920)
GO_REF:0000107 		RGD
Ensembl		 PMID:11350920 GO_REF:0000107 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Endog endonuclease G IMP RGD PMID:16407272 RGD:9685355 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Gata5 GATA binding protein 5 IMP RGD PMID:25726415 RGD:155260369 NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751 		JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:21192280 RGD:10403035 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 IMP RGD PMID:15125883 RGD:10402776 NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:28433754) RGD PMID:28433754 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 acts_upstream_of_or_within ISO MGI:1306796 (PMID:15703386) RGD PMID:15703386 NCBI chr  X:132,528,107...132,567,237
Ensembl chr  X:127,650,226...127,689,256 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:1349414 (PMID:15703386)
GO_REF:0000107 		RGD
Ensembl		 PMID:15703386 GO_REF:0000107 NCBI chr 7:27,381,392...27,466,772
Ensembl chr 7:25,494,609...25,579,540 		JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (PMID:9564035) RGD PMID:9564035 NCBI chr18:63,164,817...63,190,384
Ensembl chr18:60,894,874...60,920,481 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      execution phase of apoptosis 85
        cellular component disassembly involved in execution phase of apoptosis 36
          apoptotic nuclear changes + 35
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cell death 2200
        programmed cell death 2200
          apoptotic process 2122
            execution phase of apoptosis 85
              cellular component disassembly involved in execution phase of apoptosis 36
                apoptotic nuclear changes + 35
paths to the root