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ONTOLOGY REPORT - ANNOTATIONS


Term:autophagy
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Accession:GO:0006914 term browser browse the term
Definition:The cellular catabolic process in which cells digest cellular materials, such as organelles and other macromolecular constituents, or non-self materials such as intracellular pathogens. Autophagy serves to provide essential nutrients under conditions of cellular stress; or can remodel intracellular structures during cell differentiation.
Synonyms:alt_id: GO:0016238
 xref: Wikipedia:Autophagy_(cellular)
 only_in_taxon: NCBITaxon:2759 ! Eukaryota


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autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACBD5 acyl-CoA binding domain containing 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:26,795,072...26,844,013
Ensembl chr 9:26,794,822...26,842,134
JBrowse link
G ACVR2A activin A receptor type 2A ISO RGD PMID:27769861 RGD:329853763 NCBI chr10:33,223,902...33,311,257
Ensembl chr10:33,224,099...33,307,720
JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17589504) MGI
Ensembl
PMID:17589504 GO_REF:0000107 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785
JBrowse link
G ANXA7 annexin A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:57,863,482...57,900,972
Ensembl chr 9:57,863,546...57,900,324
JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30930081) MGI
Ensembl
PMID:30930081 GO_REF:0000107 NCBI chr28:16,852,314...16,868,408
Ensembl chr28:16,851,998...16,868,395
JBrowse link
G ARSA arylsulfatase A ISO RGD PMID:8037 RGD:1599235 NCBI chr19:33,102,803...33,105,958
Ensembl chr19:33,100,117...33,105,926
JBrowse link
G ARSB arylsulfatase B ISO RGD PMID:8037 RGD:1599235 NCBI chr 4:73,016,497...73,203,570
Ensembl chr 4:73,015,980...73,202,439
JBrowse link
G ATG10 autophagy related 10 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr 4:76,092,887...76,378,175
Ensembl chr 4:76,092,832...76,377,403
JBrowse link
G ATG101 autophagy related 101 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr11:48,243,200...48,251,129
Ensembl chr11:48,243,216...48,251,371
JBrowse link
G ATG12 autophagy related 12 involved_in ISO
IEA
RGD
UniProt
PMID:18059433 GO_REF:0000043 GO_REF:0000117 RGD:2301217 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG13 autophagy related 13 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:18,651,872...18,712,395
Ensembl chr 1:18,652,998...18,712,482
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282
JBrowse link
G ATG16L2 autophagy related 16 like 2 NOT|involved_in ISO (PMID:22082872) UniProt PMID:22082872 NCBI chr 1:64,051,793...64,066,204
Ensembl chr 1:64,052,390...64,065,972
JBrowse link
G ATG2A autophagy related 2A involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG2B autophagy related 2B involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr24:74,163,750...74,246,131
Ensembl chr24:74,163,442...74,246,116
JBrowse link
G ATG3 autophagy related 3 involved_in ISO
IEA
RGD
Ensembl
UniProt
PMID:17110912 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 RGD:1643237 NCBI chr22:68,227,772...68,256,555
Ensembl chr22:68,228,203...68,257,503
JBrowse link
G ATG4A autophagy related 4A cysteine peptidase involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr  X:95,936,385...96,011,541
Ensembl chr  X:95,983,662...96,010,578
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (PMID:18387192), (PMID:26378241), (PMID:27527864), (PMID:28821708)
(PMID:20577052)
UniProt PMID:18387192 PMID:20577052 PMID:26378241 PMID:27527864 PMID:28821708 NCBI chr10:127,689,577...127,720,232 JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 Ensembl chr10:127,689,882...127,720,226 JBrowse link
G ATG4C autophagy related 4C cysteine peptidase involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr20:70,209,536...70,291,750
Ensembl chr20:70,208,716...70,291,718
JBrowse link
G ATG4D autophagy related 4D cysteine peptidase involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 6:9,555,792...9,565,295
Ensembl chr 6:9,555,780...9,568,814
JBrowse link
G ATG5 autophagy related 5 involved_in ISO
IEA
RGD
Ensembl
InterPro
UniProt
PMID:18059433 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2301217 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25327288)
(PMID:15866887)
(PMID:20577052)
(PMID:16885219)
(PMID:17450150)
(PMID:17726112)
MGI
Ensembl
UniProt
PMID:15866887 PMID:16885219 PMID:17450150 PMID:17726112 PMID:20577052 More... GO_REF:0000043 GO_REF:0000107 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G ATG9A autophagy related 9A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19926846) UniProt
MGI
InterPro
PMID:19926846 GO_REF:0000002 GO_REF:0000043 NCBI chr10:105,123,039...105,133,057
Ensembl chr10:105,124,412...105,131,409
JBrowse link
G ATG9B autophagy related 9B involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr21:119,197,387...119,209,578
Ensembl chr21:119,198,125...119,206,599
JBrowse link
G ATP13A2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:115,578,185...115,605,416
Ensembl chr20:115,578,261...115,605,647
JBrowse link
G BCAS3 BCAS3 microtubule associated cell migration factor involved_in IEA InterPro GO_REF:0000002 NCBI chr16:31,912,523...32,620,308 JBrowse link
G BECN1 beclin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28747345)
(PMID:12372286), (PMID:17589504)
MGI
InterPro
UniProt
Ensembl
RGD
PMID:12372286 PMID:16697404 PMID:17589504 PMID:25238224 PMID:28747345 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 RGD:11558011 RGD:1643194 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G BECN2 beclin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23954414) MGI
InterPro
UniProt
Ensembl
PMID:23954414 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr25:79,042,985...79,044,787
Ensembl chr25:79,043,385...79,044,707
JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within ISO (PMID:26945058) MGI PMID:26945058 NCBI chr 1:51,430,670...51,540,344
Ensembl chr 1:51,431,180...51,462,674
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:69,242,720...69,274,364
Ensembl chr16:69,251,963...69,273,384
JBrowse link
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:74,990,706...75,002,074
Ensembl chr 5:74,990,410...75,001,988
JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:17984323) ComplexPortal PMID:17984323 NCBI chr18:69,534,547...69,539,377 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:50,827,200...50,830,730
Ensembl chr 6:50,827,284...50,830,702
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:89,672,043...89,701,801
Ensembl chr22:89,672,022...89,701,897
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:20,536,490...20,654,761
Ensembl chr14:20,594,817...20,654,404
JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,192,581...1,196,989
Ensembl chr24:1,192,842...1,197,742
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,093,909...38,139,932
Ensembl chr 2:38,093,829...38,140,367
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:77,143,302...77,174,874
Ensembl chr 8:77,143,612...77,173,852
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,989,349...47,006,035
Ensembl chr12:46,988,340...47,006,742
JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:72,943,048...72,951,121
Ensembl chr16:72,943,122...72,950,694
JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,370,334...21,390,036
Ensembl chr 8:21,373,968...21,387,698
JBrowse link
G CISD2 CDGSH iron sulfur domain 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:50,968,061...50,988,725
Ensembl chr 7:50,968,111...50,988,714
JBrowse link
G CLEC16A C-type lectin domain containing 16A involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:10,420,866...10,658,370
Ensembl chr 5:10,420,931...10,658,507
JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:21037586), (PMID:22024752), (PMID:26565691) MGI PMID:21037586 PMID:22024752 PMID:26565691 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G CREG1 cellular repressor of E1A stimulated genes 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:33966596) MGI
Ensembl
PMID:33966596 GO_REF:0000107 NCBI chr25:61,472,601...61,485,568
Ensembl chr25:61,472,617...61,488,999
JBrowse link
G CTSB cathepsin B ISO RGD PMID:18567942 RGD:2315511 NCBI chr 8:7,246,076...7,269,655
Ensembl chr 8:7,246,013...7,268,854
JBrowse link
G CUNH19orf12 chromosome unknown C19orf12 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,769,788...24,784,248
Ensembl chr 6:24,770,567...24,783,703
JBrowse link
G CUNH6orf89 chromosome unknown C6orf89 homolog acts_upstream_of_or_within ISO (PMID:35820707) MGI PMID:35820707 NCBI chr17:35,215,797...35,249,769
Ensembl chr17:35,216,916...35,249,624
JBrowse link
G DNAJC16 DnaJ heat shock protein family (Hsp40) member C16 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:116,724,259...116,770,838
Ensembl chr20:116,727,371...116,770,510
JBrowse link
G DNM2 dynamin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:9,718,014...9,830,061
Ensembl chr 6:9,718,244...9,831,206
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:26649942 RGD:13506953 NCBI chr 1:104,774,632...104,843,417
Ensembl chr 1:104,774,180...104,842,736
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:26649942 RGD:13506953 NCBI chr22:66,683,987...66,737,645
Ensembl chr22:66,691,177...66,736,690
JBrowse link
G EI24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (PMID:23074225) MGI PMID:23074225 NCBI chr 1:116,711,922...116,727,208
Ensembl chr 1:116,714,578...116,726,216
JBrowse link
G ELP6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within ISO (PMID:27715390) MGI PMID:27715390 NCBI chr22:8,899,078...8,929,072 JBrowse link
G EPG5 ectopic P-granules 5 autophagy tethering factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23479740) Ensembl
UniProt
MGI
PMID:23479740 GO_REF:0000043 GO_REF:0000107 NCBI chr18:34,946,778...35,065,449
Ensembl chr18:34,946,796...35,060,595
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24914213) Ensembl
MGI
PMID:24914213 GO_REF:0000107 NCBI chr13:26,152,974...26,266,676
Ensembl chr13:26,153,319...26,264,568
JBrowse link
G EVA1A eva-1 homolog A, regulator of programmed cell death acts_upstream_of_or_within ISO (PMID:28151473) MGI PMID:28151473 NCBI chr14:31,693,196...31,761,317
Ensembl chr14:31,732,129...31,761,329
JBrowse link
G FNBP1L formin binding protein 1 like involved_in IEA UniProt GO_REF:0000043 NCBI chr20:39,686,836...39,788,948
Ensembl chr20:39,686,742...39,788,893
JBrowse link
G FUNDC1 FUN14 domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:41,685,945...41,705,037 JBrowse link
G GABARAP GABA type A receptor-associated protein involved_in IEA UniProt GO_REF:0000043 NCBI chr16:6,614,478...6,616,516
Ensembl chr16:6,614,688...6,616,443
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:10,087,582...10,099,125
Ensembl chr11:10,087,604...10,096,612
JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:61,053,283...61,078,675
Ensembl chr 5:61,053,262...61,066,083
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within
ISO (PMID:27378698)
(PMID:23707074)
UniProt
MGI
PMID:23707074 PMID:27378698 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:20041218) Ensembl
MGI
PMID:20041218 GO_REF:0000107 NCBI chr26:19,713,780...19,930,807
Ensembl chr26:19,713,617...19,930,937
JBrowse link
G HMGA1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32123163) MGI PMID:32123163 NCBI chr17:37,848,110...37,857,835
Ensembl chr17:37,849,412...37,853,880
JBrowse link
G INHBA inhibin subunit beta A ISO RGD PMID:27769861 RGD:329853763 NCBI chr21:16,936,054...16,951,430
Ensembl chr21:16,936,175...16,946,880
JBrowse link
G ITGB4 integrin subunit beta 4 involved_in ISO (PMID:24007983) UniProt PMID:24007983 NCBI chr16:45,926,543...45,962,967 JBrowse link
G LAMP2 lysosomal associated membrane protein 2 involved_in IEA Ensembl GO_REF:0000107
G LOC103237177 high mobility group protein B1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:92,495,565...92,496,685 JBrowse link
G LOC103240299 breast carcinoma-amplified sequence 3-like involved_in IEA InterPro GO_REF:0000002 NCBI chr13:35,747,091...35,750,307 JBrowse link
G LOC103247472 sushi repeat containing protein X-linked acts_upstream_of_or_within ISO (PMID:19368996) MGI PMID:19368996
G LOC119620707 high mobility group protein B1 involved_in IEA UniProt GO_REF:0000043
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G LYN LYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:33941276) MGI
Ensembl
PMID:33941276 GO_REF:0000107 NCBI chr 8:51,919,656...52,057,376
Ensembl chr 8:51,919,808...52,057,959
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in ISO
IEA
RGD
UniProt
PMID:16420522 GO_REF:0000043 RGD:1643189 NCBI chr 2:38,857,235...38,858,955
Ensembl chr 2:38,857,299...38,858,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:72,762,428...72,774,204
Ensembl chr 5:72,763,050...72,772,770
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr25:79,079,750...79,084,248
Ensembl chr25:79,080,728...79,083,762
JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:35087090) MGI
Ensembl
PMID:35087090 GO_REF:0000107 NCBI chr 7:75,043,740...75,096,894
Ensembl chr 7:75,046,545...75,072,258
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26147524), (PMID:26607664) Ensembl
MGI
PMID:26147524 PMID:26607664 GO_REF:0000107 NCBI chr16:63,735,411...63,744,365 JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24914213) Ensembl
MGI
PMID:24914213 GO_REF:0000107 NCBI chr17:54,017,947...54,020,015
Ensembl chr17:54,018,703...54,019,887
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:36,492,158...36,531,766
Ensembl chr 5:36,496,414...36,530,499
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19074461) MGI
Ensembl
PMID:19074461 GO_REF:0000107 NCBI chr18:56,956,557...57,007,951
Ensembl chr18:56,956,174...57,007,474
JBrowse link
G NRBF2 nuclear receptor binding factor 2 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:68,150,245...68,173,388
Ensembl chr 9:68,151,057...68,159,455
JBrowse link
G PHF23 PHD finger protein 23 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:6,609,106...6,613,693
Ensembl chr16:6,609,087...6,613,690
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25327288) MGI
Ensembl
PMID:25327288 GO_REF:0000107 NCBI chr18:38,785,476...38,914,279
Ensembl chr18:38,787,717...38,914,185
JBrowse link
G PLEKHM1 pleckstrin homology and RUN domain containing M1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:60,926,006...60,980,359
Ensembl chr16:60,926,063...60,980,669
JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:14627652)
(PMID:17174099), (PMID:25014022)
MGI PMID:14627652 PMID:17174099 PMID:25014022 NCBI chr16:14,527,892...14,563,223
Ensembl chr16:14,527,672...14,563,171
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:39,516,307...39,553,627 JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:76,258,063...76,319,512
Ensembl chr20:76,259,763...76,319,430
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15123735) Ensembl
MGI
PMID:15123735 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in ISO (PMID:22939626) UniProt PMID:22939626 NCBI chr14:41,890,055...41,932,180 JBrowse link
G RAB39A RAB39A, member RAS oncogene family involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:99,353,125...99,388,429
Ensembl chr 1:99,353,210...99,387,262
JBrowse link
G RAB39B RAB39B, member RAS oncogene family involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:129,536,528...129,542,238
Ensembl chr  X:129,536,347...129,542,075
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31006538) UniProt
Ensembl
MGI
PMID:31006538 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:48,726,551...48,818,027
Ensembl chr 8:48,724,393...48,817,928
JBrowse link
G RETREG1 reticulophagy regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:31446166) MGI
Ensembl
UniProt
PMID:31446166 GO_REF:0000043 GO_REF:0000107 NCBI chr 4:16,153,003...16,297,252
Ensembl chr 4:16,154,694...16,297,161
JBrowse link
G RETREG3 reticulophagy regulator family member 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:63,680,831...63,708,160
Ensembl chr16:63,680,890...63,710,015
JBrowse link
G RNF185 ring finger protein 185 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:14,050,271...14,095,819
Ensembl chr19:14,076,113...14,093,410
JBrowse link
G RUBCN rubicon autophagy regulator involved_in IEA UniProt GO_REF:0000043 NCBI chr15:91,401,565...91,468,837
Ensembl chr15:91,400,031...91,457,933
JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:24,400,507...24,445,514
Ensembl chr 3:24,399,500...24,430,601
JBrowse link
G S100A8 S100 calcium binding protein A8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,363,142...10,364,293
Ensembl chr20:10,363,287...10,364,317
JBrowse link
G S100A9 S100 calcium binding protein A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,391,965...10,395,216
Ensembl chr20:10,391,934...10,394,720
JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr16:17,358,952...17,367,323
Ensembl chr16:17,359,577...17,366,851
JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
JBrowse link
G SYT11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:7,993,426...8,019,256
Ensembl chr20:7,992,988...8,019,238
JBrowse link
G TBC1D5 TBC1 domain family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:62,009,952...62,569,187
Ensembl chr15:62,006,701...62,358,449
JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23908015) Ensembl
MGI
PMID:23908015 GO_REF:0000107 NCBI chr 1:6,484,469...6,497,008
Ensembl chr 1:6,484,474...6,494,719
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,912,281...14,953,427
Ensembl chr28:14,912,529...14,956,059
JBrowse link
G TGFBRAP1 transforming growth factor beta receptor associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:8,900,342...8,963,107
Ensembl chr14:8,898,587...8,942,148
JBrowse link
G TMEM150B transmembrane protein 150B involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:47,915,372...47,929,885
Ensembl chr 6:47,911,359...47,922,094
JBrowse link
G TMEM59 transmembrane protein 59 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:78,884,722...78,907,954
Ensembl chr20:78,884,768...78,907,476
JBrowse link
G TOLLIP toll interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:1,094,535...1,127,342
Ensembl chr 1:1,094,582...1,125,045
JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:89,893,531...89,918,054
Ensembl chr 8:89,893,419...89,908,228
JBrowse link
G TP53INP2 tumor protein p53 inducible nuclear protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:39,002,619...39,011,751
Ensembl chr 2:39,007,023...39,008,613
JBrowse link
G TRAPPC4 trafficking protein particle complex subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,389,582...110,395,135
Ensembl chr 1:110,389,914...110,394,959
JBrowse link
G TRIM17 tripartite motif containing 17 involved_in ISO (PMID:25127057) UniProt PMID:25127057 NCBI chr25:1,312,737...1,322,058 JBrowse link
G TRIM17 tripartite motif containing 17 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr25:1,315,164...1,320,797 JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 1:61,040,908...61,067,815
Ensembl chr 1:61,040,928...61,069,356
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr16:18,335,095...18,434,031
Ensembl chr16:18,335,235...18,433,578
JBrowse link
G ULK3 unc-51 like kinase 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr26:8,628,289...8,635,465
Ensembl chr26:8,628,454...8,636,092
JBrowse link
G UMOD uromodulin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28990932) MGI
Ensembl
PMID:28990932 GO_REF:0000107 NCBI chr 5:18,620,927...18,641,312
Ensembl chr 5:18,619,895...18,638,719
JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:70,105,653...70,186,512
Ensembl chr 5:70,139,470...70,185,884
JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:67,032,575...67,353,207
Ensembl chr 1:67,032,436...67,353,166
JBrowse link
G VAMP8 vesicle associated membrane protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:21,575,057...21,580,054
Ensembl chr14:21,575,161...21,579,820
JBrowse link
G VCP valosin containing protein involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr12:45,545,139...45,560,702
Ensembl chr12:45,545,507...45,563,380
JBrowse link
G VMP1 vacuole membrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,606,863...33,738,427
Ensembl chr16:33,609,202...33,738,289
JBrowse link
G VPS11 VPS11 core subunit of CORVET and HOPS complexes involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 1:110,440,681...110,455,092
Ensembl chr 1:110,439,933...110,455,844
JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25996471)
(PMID:33941276)
dictyBase
Ensembl
TreeGrafter
MGI
PMID:25996471 PMID:33941276 GO_REF:0000107 GO_REF:0000118 NCBI chr12:88,140,842...88,380,966
Ensembl chr12:88,167,258...88,379,614
JBrowse link
G VPS39 VPS39 subunit of HOPS complex involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr26:40,787,204...40,834,065
Ensembl chr26:40,801,245...40,834,113
JBrowse link
G VPS51 VPS51 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,117,080...9,142,070
Ensembl chr 1:9,116,723...9,142,031
JBrowse link
G VTI1A vesicle transport through interaction with t-SNAREs 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:105,330,089...105,828,029
Ensembl chr 9:105,330,143...105,695,049
JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr  X:46,183,278...46,188,564
Ensembl chr  X:46,183,443...46,188,536
JBrowse link
G WDR45B WD repeat domain 45B involved_in IEA UniProt GO_REF:0000043 NCBI chr16:74,514,729...74,549,860
Ensembl chr16:74,512,231...74,550,105
JBrowse link
G WDR47 WD repeat domain 47 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29078390) Ensembl
MGI
PMID:29078390 GO_REF:0000107 NCBI chr20:24,535,838...24,604,157
Ensembl chr20:24,535,913...24,604,646
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr16:53,096,027...53,133,828
Ensembl chr16:53,096,023...53,135,010
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr28:16,504,557...16,558,670
Ensembl chr28:16,502,435...16,558,650
JBrowse link
aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG4A autophagy related 4A cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:95,936,385...96,011,541
Ensembl chr  X:95,983,662...96,010,578
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr10:127,689,882...127,720,226 JBrowse link
G ATG4C autophagy related 4C cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:70,209,536...70,291,750
Ensembl chr20:70,208,716...70,291,718
JBrowse link
G ATG4D autophagy related 4D cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:9,555,792...9,565,295
Ensembl chr 6:9,555,780...9,568,814
JBrowse link
G ATG5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:79,079,750...79,084,248
Ensembl chr25:79,080,728...79,083,762
JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:94,462,867...94,512,313
Ensembl chr12:94,461,972...94,511,747
JBrowse link
G WDFY3 WD repeat and FYVE domain containing 3 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 7:33,031,762...33,331,475
Ensembl chr 7:33,030,069...33,237,701
JBrowse link
G WDR81 WD repeat domain 81 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:1,377,135...1,391,404
Ensembl chr16:1,377,669...1,391,404
JBrowse link
autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785
JBrowse link
G AP4M1 adaptor related protein complex 4 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,971,007...12,976,914
Ensembl chr28:12,971,297...12,976,779
JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30930081) MGI
Ensembl
PMID:30930081 GO_REF:0000107 NCBI chr28:16,852,314...16,868,408
Ensembl chr28:16,851,998...16,868,395
JBrowse link
G ATG10 autophagy related 10 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:76,092,887...76,378,175
Ensembl chr 4:76,092,832...76,377,403
JBrowse link
G ATG101 autophagy related 101 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:48,243,200...48,251,129
Ensembl chr11:48,243,216...48,251,371
JBrowse link
G ATG12 autophagy related 12 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG13 autophagy related 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19211835) MGI
Ensembl
InterPro
PMID:19211835 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:18,651,872...18,712,395
Ensembl chr 1:18,652,998...18,712,482
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282
JBrowse link
G ATG16L1 autophagy related 16 like 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:119,286,609...119,331,226
Ensembl chr10:119,286,751...119,333,267
JBrowse link
G ATG16L2 autophagy related 16 like 2 involved_in
NOT|involved_in
IEA
ISO
(PMID:22082872) Ensembl
UniProt
InterPro
PMID:22082872 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:64,051,793...64,066,204
Ensembl chr 1:64,052,390...64,065,972
JBrowse link
G ATG2A autophagy related 2A involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG2B autophagy related 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:74,163,750...74,246,131
Ensembl chr24:74,163,442...74,246,116
JBrowse link
G ATG3 autophagy related 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21220506) Ensembl
TreeGrafter
MGI
PMID:21220506 GO_REF:0000107 GO_REF:0000118 NCBI chr22:68,227,772...68,256,555
Ensembl chr22:68,228,203...68,257,503
JBrowse link
G ATG4A autophagy related 4A cysteine peptidase involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:95,936,385...96,011,541
Ensembl chr  X:95,983,662...96,010,578
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (PMID:21177865)
(PMID:25578879)
UniProt
ParkinsonsUK-UCL
PMID:21177865 PMID:25578879 NCBI chr10:127,689,577...127,720,232 JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr10:127,689,882...127,720,226 JBrowse link
G ATG4C autophagy related 4C cysteine peptidase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:70,209,536...70,291,750
Ensembl chr20:70,208,716...70,291,718
JBrowse link
G ATG4D autophagy related 4D cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:9,555,792...9,565,295
Ensembl chr 6:9,555,780...9,568,814
JBrowse link
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:23704209) RGD
Ensembl
MGI
PMID:16420522 PMID:23704209 GO_REF:0000107 RGD:1643189 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23704209) MGI
TreeGrafter
Ensembl
PMID:23704209 GO_REF:0000107 GO_REF:0000118 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G ATG9A autophagy related 9A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15755735), (PMID:22456507)
(PMID:23402761)
(PMID:22456507)
MGI
Ensembl
PMID:15755735 PMID:22456507 PMID:23402761 GO_REF:0000107 NCBI chr10:105,123,039...105,133,057
Ensembl chr10:105,124,412...105,131,409
JBrowse link
G ATG9B autophagy related 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15755735) MGI
Ensembl
PMID:15755735 GO_REF:0000107 NCBI chr21:119,197,387...119,209,578
Ensembl chr21:119,198,125...119,206,599
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:105,522,175...105,590,291
Ensembl chr11:105,522,157...105,590,958
JBrowse link
G BECN1 beclin 1 involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
UniProt
PMID:16420522 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:1643189 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G BECN2 beclin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:79,042,985...79,044,787
Ensembl chr25:79,043,385...79,044,707
JBrowse link
G CTSD cathepsin D acts_upstream_of_or_within ISO (PMID:15452145) MGI PMID:15452145 NCBI chr 1:1,570,163...1,581,857
Ensembl chr 1:1,570,069...1,581,833
JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chr20:24,357,584...24,365,702 JBrowse link
G EMC6 ER membrane protein complex subunit 6 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:3,171,347...3,172,287
Ensembl chr16:3,171,766...3,172,095
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24430976) Ensembl
MGI
PMID:24430976 GO_REF:0000107 NCBI chr13:26,152,974...26,266,676
Ensembl chr13:26,153,319...26,264,568
JBrowse link
G IRGM immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chr23:53,449,576...53,451,373 JBrowse link
G LOC103225886 endosome/lysosome-associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:24,339,508...24,429,525
Ensembl chr20:24,339,729...24,380,162
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,857,235...38,858,955
Ensembl chr 2:38,857,299...38,858,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:37943659) UniProt PMID:37943659 NCBI chr 5:72,762,428...72,774,204
Ensembl chr 5:72,763,050...72,772,770
JBrowse link
G MTM1 myotubularin 1 acts_upstream_of ISO (PMID:23695157) MGI PMID:23695157 NCBI chr  X:125,151,279...125,250,816
Ensembl chr  X:125,174,289...125,249,588
JBrowse link
G NSFL1C NSFL1 cofactor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:55,102,384...55,127,928
Ensembl chr 2:55,103,266...55,126,341
JBrowse link
G PACS2 phosphofurin acidic cluster sorting protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23455425) MGI
Ensembl
PMID:23455425 GO_REF:0000107 NCBI chr24:83,211,766...83,292,231
Ensembl chr24:83,212,300...83,295,233
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:24098492) RGD
TreeGrafter
MGI
Ensembl
PMID:12453151 PMID:24098492 GO_REF:0000107 GO_REF:0000118 RGD:2303129 NCBI chr18:38,785,476...38,914,279
Ensembl chr18:38,787,717...38,914,185
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15452145) Ensembl
MGI
PMID:15452145 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132
JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in ISO (PMID:22939626) UniProt PMID:22939626 NCBI chr14:41,890,055...41,932,180 JBrowse link
G RAB23 RAB23, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,383,064...14,418,144
Ensembl chr17:14,383,155...14,414,698
JBrowse link
G RAB33B RAB33B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:86,422,234...86,446,341
Ensembl chr 7:86,422,612...86,446,338
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:52,231,481...52,309,276
Ensembl chr22:52,230,835...52,309,306
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:48,726,551...48,818,027
Ensembl chr 8:48,724,393...48,817,928
JBrowse link
G RUFY4 RUN and FYVE domain containing 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr10:103,958,208...103,979,948
Ensembl chr10:103,958,495...103,979,410
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr23:42,153,576...42,160,903
Ensembl chr23:42,153,026...42,160,907
JBrowse link
G STX12 syntaxin 12 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:104,966,763...105,020,908
Ensembl chr20:104,966,581...105,020,901
JBrowse link
G SYNPO2 synaptopodin 2 involved_in ISO PMID:23434281 UniProt PMID:23434281 RGD:12793031 NCBI chr 7:66,376,599...66,550,500
Ensembl chr 7:66,392,958...66,549,961
JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23908015) Ensembl
MGI
PMID:23908015 GO_REF:0000107 NCBI chr 1:6,484,469...6,497,008
Ensembl chr 1:6,484,474...6,494,719
JBrowse link
G TMEM41B transmembrane protein 41B involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:55,490,430...55,520,146
Ensembl chr 1:55,490,607...55,520,206
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:89,893,531...89,918,054
Ensembl chr 8:89,893,419...89,908,228
JBrowse link
G TP53INP2 tumor protein p53 inducible nuclear protein 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:39,002,619...39,011,751
Ensembl chr 2:39,007,023...39,008,613
JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:28,726,357...28,752,389
Ensembl chr 1:28,734,380...28,747,092
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,893,689...22,906,913
Ensembl chr12:22,894,886...22,896,847
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:94,462,867...94,512,313
Ensembl chr12:94,461,972...94,511,747
JBrowse link
G UBQLN2 ubiquilin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:52,486,154...52,489,531
Ensembl chr  X:52,486,454...52,488,328
JBrowse link
G UBXN2A UBX domain protein 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:83,672,327...83,722,961
Ensembl chr14:83,673,282...83,703,633
JBrowse link
G UBXN2B UBX domain protein 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:54,397,523...54,436,468
Ensembl chr 8:54,397,601...54,432,523
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:18,335,095...18,434,031
Ensembl chr16:18,335,235...18,433,578
JBrowse link
G ULK3 unc-51 like kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:8,628,289...8,635,465
Ensembl chr26:8,628,454...8,636,092
JBrowse link
G VMP1 vacuole membrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,606,863...33,738,427
Ensembl chr16:33,609,202...33,738,289
JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,183,278...46,188,564
Ensembl chr  X:46,183,443...46,188,536
JBrowse link
G WDR45B WD repeat domain 45B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:74,514,729...74,549,860
Ensembl chr16:74,512,231...74,550,105
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,096,027...53,133,828
Ensembl chr16:53,096,023...53,135,010
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:16,504,557...16,558,670
Ensembl chr28:16,502,435...16,558,650
JBrowse link
autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG2B AFG2 AAA ATPase homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:37,793,373...37,812,921
Ensembl chr26:37,793,379...37,811,582
JBrowse link
G ATG12 autophagy related 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282
JBrowse link
G BECN1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 5:74,990,706...75,002,074
Ensembl chr 5:74,990,410...75,001,988
JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:17984323) ComplexPortal PMID:17984323 NCBI chr18:69,534,547...69,539,377 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 6:50,827,200...50,830,730
Ensembl chr 6:50,827,284...50,830,702
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr22:89,672,043...89,701,801
Ensembl chr22:89,672,022...89,701,897
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr14:20,536,490...20,654,761
Ensembl chr14:20,594,817...20,654,404
JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr24:1,192,581...1,196,989
Ensembl chr24:1,192,842...1,197,742
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 2:38,093,909...38,139,932
Ensembl chr 2:38,093,829...38,140,367
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 8:77,143,302...77,174,874
Ensembl chr 8:77,143,612...77,173,852
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr12:46,989,349...47,006,035
Ensembl chr12:46,988,340...47,006,742
JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr16:72,943,048...72,951,121
Ensembl chr16:72,943,122...72,950,694
JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 8:21,370,334...21,390,036
Ensembl chr 8:21,373,968...21,387,698
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16714284) MGI
Ensembl
PMID:16714284 GO_REF:0000107 NCBI chr 5:26,320,132...26,343,009
Ensembl chr 5:26,320,061...26,337,402
JBrowse link
G ELP6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within ISO (PMID:27715390) MGI PMID:27715390 NCBI chr22:8,899,078...8,929,072 JBrowse link
G EPG5 ectopic P-granules 5 autophagy tethering factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23479740) Ensembl
TreeGrafter
MGI
PMID:23479740 GO_REF:0000107 GO_REF:0000118 NCBI chr18:34,946,778...35,065,449
Ensembl chr18:34,946,796...35,060,595
JBrowse link
G IRGM immunity related GTPase M involved_in ISO (PMID:21757726) UniProt PMID:21757726 NCBI chr23:53,449,576...53,451,373 JBrowse link
G LAMP2 lysosomal associated membrane protein 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118
G LIX1 limb and CNS expressed 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:90,920,248...90,971,833
Ensembl chr 4:90,923,102...90,971,208
JBrowse link
G LIX1L limb and CNS expressed 1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:12,790,629...12,812,248
Ensembl chr20:12,790,756...12,811,931
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,857,235...38,858,955
Ensembl chr 2:38,857,299...38,858,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:28223137) UniProt PMID:28223137 NCBI chr 5:72,762,428...72,774,204
Ensembl chr 5:72,763,050...72,772,770
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:79,079,750...79,084,248
Ensembl chr25:79,080,728...79,083,762
JBrowse link
G MCOLN1 mucolipin TRP cation channel 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20600908) Ensembl
MGI
PMID:20600908 GO_REF:0000107 NCBI chr 6:7,019,132...7,030,675
Ensembl chr 6:7,019,277...7,030,474
JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:29514215) MGI
Ensembl
PMID:29514215 GO_REF:0000107 NCBI chr 7:75,043,740...75,096,894
Ensembl chr 7:75,046,545...75,072,258
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,785,476...38,914,279
Ensembl chr18:38,787,717...38,914,185
JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,444,570...59,515,619
Ensembl chr15:59,444,616...59,515,240
JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:24,400,507...24,445,514
Ensembl chr 3:24,399,500...24,430,601
JBrowse link
G SNAP29 synaptosome associated protein 29 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,797,690...4,827,573
Ensembl chr19:4,797,725...4,830,251
JBrowse link
G SNAPIN SNAP associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22797916)
(PMID:20920792)
Ensembl
MGI
PMID:20920792 PMID:22797916 GO_REF:0000107 NCBI chr20:10,147,577...10,150,721
Ensembl chr20:10,148,099...10,150,641
JBrowse link
G SNX14 sorting nexin 14 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr13:10,172,960...10,265,852
Ensembl chr13:10,173,023...10,265,766
JBrowse link
G STX17 syntaxin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,457,816...39,525,138
Ensembl chr12:39,462,367...39,516,531
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,912,281...14,953,427
Ensembl chr28:14,912,529...14,956,059
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:94,462,867...94,512,313
Ensembl chr12:94,461,972...94,511,747
JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:67,032,575...67,353,207
Ensembl chr 1:67,032,436...67,353,166
JBrowse link
G VAMP7 vesicle associated membrane protein 7 NOT|involved_in ISO (PMID:23217709) UniProt PMID:23217709 NCBI chr  X:129,937,026...129,984,071
Ensembl chr  X:129,937,046...129,984,119
JBrowse link
G VAMP8 vesicle associated membrane protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:21,575,057...21,580,054
Ensembl chr14:21,575,161...21,579,820
JBrowse link
G VCP valosin containing protein involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr12:45,545,139...45,560,702
Ensembl chr12:45,545,507...45,563,380
JBrowse link
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog NOT|involved_in ISO (PMID:25783203) UniProt PMID:25783203 NCBI chr24:54,688,278...54,719,054
Ensembl chr24:54,688,230...54,719,042
JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:33,527,526...33,554,742
Ensembl chr 2:33,527,554...33,557,145
JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:117,585,325...117,618,713
Ensembl chr11:117,582,781...117,615,743
JBrowse link
G VPS33B VPS33B late endosome and lysosome associated NOT|involved_in ISO (PMID:25783203) UniProt PMID:25783203 NCBI chr29:8,838,289...8,862,914
Ensembl chr29:8,838,735...8,862,977
JBrowse link
G VTI1B vesicle transport through interaction with t-SNAREs 1B NOT|involved_in ISO (PMID:23217709) UniProt PMID:23217709 NCBI chr24:44,884,082...44,907,819
Ensembl chr24:44,884,315...44,907,771
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 NOT|involved_in ISO (PMID:20505359) UniProt PMID:20505359 NCBI chr28:16,504,557...16,558,670
Ensembl chr28:16,502,435...16,558,650
JBrowse link
autophagosome membrane docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG14 autophagy related 14 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:105,522,175...105,590,291
Ensembl chr11:105,522,157...105,590,958
JBrowse link
G CALM1 calmodulin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:68,133,446...68,145,117
Ensembl chr24:68,133,428...68,145,180
JBrowse link
G CALM2 calmodulin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:60,027,884...60,042,041
Ensembl chr14:60,027,801...60,044,951
Ensembl chr 6:60,027,801...60,044,951
Ensembl chr24:60,027,801...60,044,951
JBrowse link
G CALM3 calmodulin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,957,012...39,966,562
Ensembl chr 6:39,957,320...39,966,581
Ensembl chr24:39,957,320...39,966,581
Ensembl chr14:39,957,320...39,966,581
JBrowse link
G SNAP29 synaptosome associated protein 29 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,797,690...4,827,573
Ensembl chr19:4,797,725...4,830,251
JBrowse link
G STX17 syntaxin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,457,816...39,525,138
Ensembl chr12:39,462,367...39,516,531
JBrowse link
G VAMP8 vesicle associated membrane protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:21,575,057...21,580,054
Ensembl chr14:21,575,161...21,579,820
JBrowse link
G VMP1 vacuole membrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,606,863...33,738,427
Ensembl chr16:33,609,202...33,738,289
JBrowse link
autophagosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP13A2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:115,578,185...115,605,416
Ensembl chr20:115,578,261...115,605,647
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) ARUK-UCL PMID:23707074 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (PMID:24098492) MGI PMID:24098492 NCBI chr 1:47,759,850...47,874,458
Ensembl chr 1:47,795,954...47,877,028
JBrowse link
G PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24098492) Ensembl
MGI
PMID:24098492 GO_REF:0000107 NCBI chr25:24,855,712...24,926,050
Ensembl chr25:24,855,766...24,926,346
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:25365221) MGI PMID:25365221 NCBI chr26:38,386,000...38,482,236 JBrowse link
G ZFYVE26 zinc finger FYVE-type containing 26 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25365221) MGI
Ensembl
PMID:25365221 GO_REF:0000107 NCBI chr24:44,986,610...45,053,801
Ensembl chr24:44,986,609...45,053,134
JBrowse link
autophagosome-endosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RUBCNL rubicon like autophagy enhancer involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:24,400,507...24,445,514
Ensembl chr 3:24,399,500...24,430,601
JBrowse link
autophagosome-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ARF like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:41,192,458...41,247,048
Ensembl chr22:41,192,484...41,244,822
JBrowse link
G ATP13A2 ATPase cation transporting 13A2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:115,578,185...115,605,416
Ensembl chr20:115,578,261...115,605,647
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,320,132...26,343,009
Ensembl chr 5:26,320,061...26,337,402
JBrowse link
G DIAPH3 diaphanous related formin 3 acts_upstream_of_or_within ISO (PMID:33036023) MGI PMID:33036023 NCBI chr 3:37,455,326...37,951,237 JBrowse link
G DIAPH3 diaphanous related formin 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 3:37,663,051...37,951,107 JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,306,307...22,482,074
Ensembl chr 9:22,306,312...22,481,954
JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:67,391,786...67,429,560
Ensembl chr16:67,406,981...67,427,691
JBrowse link
G PLEKHM1 pleckstrin homology and RUN domain containing M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:60,926,006...60,980,359
Ensembl chr16:60,926,063...60,980,669
JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:24,400,507...24,445,514
Ensembl chr 3:24,399,500...24,430,601
JBrowse link
G TOM1 target of myb1 membrane trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,062,890...18,110,306
Ensembl chr19:18,062,948...18,111,585
JBrowse link
G VPS39 VPS39 subunit of HOPS complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:40,787,204...40,834,065
Ensembl chr26:40,801,245...40,834,113
JBrowse link
autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG10 autophagy related 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:76,092,887...76,378,175
Ensembl chr 4:76,092,832...76,377,403
JBrowse link
G ATG12 autophagy related 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG2A autophagy related 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG2B autophagy related 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:74,163,750...74,246,131
Ensembl chr24:74,163,442...74,246,116
JBrowse link
G ATG3 autophagy related 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:68,227,772...68,256,555
Ensembl chr22:68,228,203...68,257,503
JBrowse link
G ATG5 autophagy related 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23981124) MGI
TreeGrafter
PMID:23981124 GO_REF:0000118 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G ATG9A autophagy related 9A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:105,123,039...105,133,057
Ensembl chr10:105,124,412...105,131,409
JBrowse link
G ATG9B autophagy related 9B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:119,197,387...119,209,578
Ensembl chr21:119,198,125...119,206,599
JBrowse link
G CAPN10 calpain 10 ISO RGD PMID:22568896 RGD:7247732 NCBI chr10:126,613,722...126,626,388 JBrowse link
G CISD2 CDGSH iron sulfur domain 2 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 7:50,968,061...50,988,725
Ensembl chr 7:50,968,111...50,988,714
JBrowse link
G FBXL4 F-box and leucine rich repeat protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:32525278) MGI
Ensembl
PMID:32525278 GO_REF:0000107 NCBI chr13:74,916,756...74,993,959
Ensembl chr13:74,916,869...74,997,462
JBrowse link
G FBXO7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:15,300,135...15,324,256
Ensembl chr19:15,300,158...15,323,956
JBrowse link
G FIS1 fission, mitochondrial 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:11,934,848...11,940,230
Ensembl chr28:11,934,821...11,941,901
JBrowse link
G FUNDC1 FUN14 domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22267086) MGI
TreeGrafter
PMID:22267086 GO_REF:0000118 NCBI chr  X:41,685,945...41,705,037 JBrowse link
G FUNDC2 FUN14 domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:129,315,315...129,342,395
Ensembl chr  X:129,315,465...129,342,193
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22267086) MGI
Ensembl
PMID:22267086 GO_REF:0000107 NCBI chr 2:38,857,235...38,858,955
Ensembl chr 2:38,857,299...38,858,505
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:19783904 RGD:10059673 NCBI chr27:25,882,385...26,563,530
Ensembl chr27:26,465,499...26,564,582
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19029340), (PMID:23933751), (PMID:24896179)
(PMID:25621951)
UniProt PMID:19029340 PMID:23933751 PMID:24896179 PMID:25621951 NCBI chr13:88,856,056...90,329,379 JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:89,318,323...90,034,758 JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:48,726,551...48,818,027
Ensembl chr 8:48,724,393...48,817,928
JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr23:14,113,276...14,139,758
Ensembl chr23:14,113,375...14,136,424
JBrowse link
G SNX30 sorting nexin family member 30 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:26,650,088...26,774,395
Ensembl chr12:26,656,221...26,774,009
JBrowse link
G SNX7 sorting nexin 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:34,531,399...34,639,958
Ensembl chr20:34,531,151...34,639,107
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:18,335,095...18,434,031
Ensembl chr16:18,335,235...18,433,578
JBrowse link
G ULK3 unc-51 like kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:8,628,289...8,635,465
Ensembl chr26:8,628,454...8,636,092
JBrowse link
G USP30 ubiquitin specific peptidase 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:104,254,923...104,292,373
Ensembl chr11:104,255,012...104,290,273
JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 acts_upstream_of_or_within
involved_in
ISO PMID:18644871 MGI
ParkinsonsUK-UCL
PMID:18644871 RGD:10412301 NCBI chr 1:114,447,348...114,452,693
Ensembl chr 1:114,446,544...114,451,562
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18579532) Ensembl
MGI
PMID:18579532 GO_REF:0000107
G SYNPO2 synaptopodin 2 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 7:66,376,599...66,550,500
Ensembl chr 7:66,392,958...66,549,961
JBrowse link
engulfment of target by autophagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,019,733...14,141,588
Ensembl chr28:14,019,968...14,141,795
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG2A autophagy related 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG2B autophagy related 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:74,163,750...74,246,131
Ensembl chr24:74,163,442...74,246,116
JBrowse link
G ATG3 autophagy related 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:68,227,772...68,256,555
Ensembl chr22:68,228,203...68,257,503
JBrowse link
G GAA alpha glucosidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:72,064,315...72,083,293
Ensembl chr16:72,067,267...72,083,349
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:10,087,582...10,099,125
Ensembl chr11:10,087,604...10,096,612
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:48,726,551...48,818,027
Ensembl chr 8:48,724,393...48,817,928
JBrowse link
G STBD1 starch binding domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,799,870...24,804,273
Ensembl chr 7:24,799,906...24,804,473
JBrowse link
late endosomal microautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in ISO (PMID:21238931) ParkinsonsUK-UCL PMID:21238931 NCBI chr 1:114,447,348...114,452,693
Ensembl chr 1:114,446,544...114,451,562
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:58,081,800...58,095,115
Ensembl chr 5:58,082,521...58,095,173
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,336,959...16,370,208
Ensembl chr18:16,336,921...16,370,291
JBrowse link
lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,748,737...32,751,924
Ensembl chr14:32,748,909...32,751,776
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:52,231,481...52,309,276
Ensembl chr22:52,230,835...52,309,306
JBrowse link
G SPART spartin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:14,887,896...14,925,296
Ensembl chr 3:14,886,633...14,924,865
JBrowse link
macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282
JBrowse link
G ATG16L1 autophagy related 16 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,286,609...119,331,226
Ensembl chr10:119,286,751...119,333,267
JBrowse link
G ATG16L2 autophagy related 16 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:64,051,793...64,066,204
Ensembl chr 1:64,052,390...64,065,972
JBrowse link
G ATG3 autophagy related 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24035364) Ensembl
MGI
PMID:24035364 GO_REF:0000107 NCBI chr22:68,227,772...68,256,555
Ensembl chr22:68,228,203...68,257,503
JBrowse link
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20453062)
(PMID:22496425), (PMID:23704209), (PMID:24035364)
UniProt
Ensembl
MGI
PMID:20453062 PMID:22496425 PMID:23704209 PMID:24035364 GO_REF:0000107 GO_REF:0000117 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24035364)
(PMID:22496425), (PMID:23704209)
MGI
Ensembl
PMID:22496425 PMID:23704209 PMID:24035364 GO_REF:0000107 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G BECN1 beclin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14657337)
(PMID:17468177)
Ensembl
MGI
PMID:14657337 PMID:17468177 GO_REF:0000107 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16714284) MGI
Ensembl
PMID:16714284 GO_REF:0000107 NCBI chr 5:26,320,132...26,343,009
Ensembl chr 5:26,320,061...26,337,402
JBrowse link
G EI24 EI24 autophagy associated transmembrane protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:116,711,922...116,727,208
Ensembl chr 1:116,714,578...116,726,216
JBrowse link
G HDAC10 histone deacetylase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,735,091...32,741,200
Ensembl chr19:32,735,406...32,740,817
JBrowse link
G HMOX1 heme oxygenase 1 acts_upstream_of
involved_in
ISO
IEA
(PMID:20705711) MGI
Ensembl
PMID:20705711 GO_REF:0000107 NCBI chr19:18,144,466...18,157,944
Ensembl chr19:18,144,545...18,157,971
JBrowse link
G ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:37,402,940...37,555,871
Ensembl chr17:37,402,966...37,516,822
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:38,857,235...38,858,955
Ensembl chr 2:38,857,299...38,858,505
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:28223137) UniProt PMID:28223137 NCBI chr 5:72,762,428...72,774,204
Ensembl chr 5:72,763,050...72,772,770
JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:79,079,750...79,084,248
Ensembl chr25:79,080,728...79,083,762
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in
acts_upstream_of
IEA
ISO
(PMID:16714284) Ensembl
MGI
PMID:16714284 GO_REF:0000107 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G MYO5A myosin VA ISO RGD PMID:29217155 RGD:42721980 NCBI chr26:30,865,947...31,085,184 JBrowse link
G NBR1 NBR1 autophagy cargo receptor involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr16:63,108,946...63,150,010
Ensembl chr16:63,110,548...63,144,481
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 acts_upstream_of
involved_in
ISO
IEA
(PMID:17468177) MGI
Ensembl
PMID:17468177 GO_REF:0000107 NCBI chr18:56,956,557...57,007,951
Ensembl chr18:56,956,174...57,007,474
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:25686249) UniProt PMID:25686249 NCBI chr15:78,265,099...78,339,307
Ensembl chr15:78,265,252...78,339,873
JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (PMID:24098492) MGI PMID:24098492 NCBI chr 1:47,759,850...47,874,458
Ensembl chr 1:47,795,954...47,877,028
JBrowse link
G PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24098492) Ensembl
MGI
PMID:24098492 GO_REF:0000107 NCBI chr25:24,855,712...24,926,050
Ensembl chr25:24,855,766...24,926,346
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,785,476...38,914,279
Ensembl chr18:38,787,717...38,914,185
JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr15:59,444,570...59,515,619
Ensembl chr15:59,444,616...59,515,240
JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of ISO (PMID:17476689) MGI PMID:17476689 NCBI chr  X:46,032,640...46,040,220 JBrowse link
G RAB2A RAB2A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:56,439,021...56,542,059
Ensembl chr 8:56,438,780...56,540,827
JBrowse link
G RAB2B RAB2B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:21,927,529...21,946,206
Ensembl chr29:21,927,107...21,946,012
JBrowse link
G SNF8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,343,260...69,357,843
Ensembl chr16:69,339,804...69,357,860
JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
JBrowse link
G TBC1D5 TBC1 domain family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:62,009,952...62,569,187
Ensembl chr15:62,006,701...62,358,449
JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23704209) Ensembl
MGI
PMID:23704209 GO_REF:0000107 NCBI chr 1:6,484,469...6,497,008
Ensembl chr 1:6,484,474...6,494,719
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,912,281...14,953,427
Ensembl chr28:14,912,529...14,956,059
JBrowse link
G TMEM74 transmembrane protein 74 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:103,604,060...103,637,945
Ensembl chr 8:103,509,309...103,510,226
Ensembl chr 8:103,509,309...103,510,226
JBrowse link
G TP53INP2 tumor protein p53 inducible nuclear protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24713655) Ensembl
MGI
PMID:24713655 GO_REF:0000107 NCBI chr 2:39,002,619...39,011,751
Ensembl chr 2:39,007,023...39,008,613
JBrowse link
G TSG101 tumor susceptibility 101 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:46,401,889...46,451,122
Ensembl chr 1:46,402,024...46,450,916
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:94,462,867...94,512,313
Ensembl chr12:94,461,972...94,511,747
JBrowse link
G UBXN6 UBX domain protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,175,858...4,188,687
Ensembl chr 6:4,175,108...4,188,649
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21258367) Ensembl
MGI
PMID:21258367 GO_REF:0000107 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,545,139...45,560,702
Ensembl chr12:45,545,507...45,563,380
JBrowse link
G VPS28 VPS28 subunit of ESCRT-I involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:138,636,092...138,641,011 JBrowse link
G VPS37A VPS37A subunit of ESCRT-I involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:15,333,570...15,384,451
Ensembl chr 8:15,333,557...15,374,678
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA UniProt GO_REF:0000117 NCBI chr11:118,205,062...118,235,844
Ensembl chr11:118,205,002...118,235,768
JBrowse link
G VPS37C VPS37C subunit of ESCRT-I involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:12,686,887...12,717,335
Ensembl chr 1:12,686,708...12,717,365
JBrowse link
G VPS41 VPS41 subunit of HOPS complex involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:19,629,271...19,814,360
Ensembl chr21:19,629,282...19,817,649
JBrowse link
G VTI1A vesicle transport through interaction with t-SNAREs 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:105,330,089...105,828,029
Ensembl chr 9:105,330,143...105,695,049
JBrowse link
G VTI1B vesicle transport through interaction with t-SNAREs 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:44,884,082...44,907,819
Ensembl chr24:44,884,315...44,907,771
JBrowse link
G YOD1 YOD1 deubiquitinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:22,307,703...22,311,919
Ensembl chr25:22,307,778...22,309,716
JBrowse link
G ZFYVE1 zinc finger FYVE-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:50,219,429...50,276,783
Ensembl chr24:50,220,867...50,273,900
JBrowse link
microautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,286,609...119,331,226
Ensembl chr10:119,286,751...119,333,267
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (PMID:33909989) UniProt PMID:33909989 NCBI chr10:127,689,577...127,720,232 JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:127,689,882...127,720,226 JBrowse link
G ZNF416 zinc finger protein 416 involved_in ISO PMID:33249983
(PMID:33249983)
UniProt PMID:33249983 RGD:329955556 NCBI chr 6:49,943,136...49,950,935 JBrowse link
mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (PMID:38081847) UniProt PMID:38081847 NCBI chr10:89,074,333...89,314,144
Ensembl chr10:89,075,798...89,181,235
JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785
JBrowse link
G ARFIP2 ARF interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,346,479...58,351,433
Ensembl chr 1:58,347,495...58,353,749
JBrowse link
G ARHGAP26 Rho GTPase activating protein 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:45,399,159...45,860,331
Ensembl chr23:45,399,259...45,849,040
JBrowse link
G ATG13 autophagy related 13 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:18,651,872...18,712,395
Ensembl chr 1:18,652,998...18,712,482
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282
JBrowse link
G ATG4A autophagy related 4A cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:95,936,385...96,011,541
Ensembl chr  X:95,983,662...96,010,578
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (PMID:33773106) UniProt PMID:33773106 NCBI chr10:127,689,577...127,720,232 JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr10:127,689,882...127,720,226 JBrowse link
G ATG4C autophagy related 4C cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:70,209,536...70,291,750
Ensembl chr20:70,208,716...70,291,718
JBrowse link
G ATG4D autophagy related 4D cysteine peptidase involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:9,555,792...9,565,295
Ensembl chr 6:9,555,780...9,568,814
JBrowse link
G ATG5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G BECN1 beclin 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G BECN2 beclin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:79,042,985...79,044,787
Ensembl chr25:79,043,385...79,044,707
JBrowse link
G BNIP3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,570,958...124,586,002
Ensembl chr 9:124,568,695...124,585,980
JBrowse link
G CLEC16A C-type lectin domain containing 16A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,420,866...10,658,370
Ensembl chr 5:10,420,931...10,658,507
JBrowse link
G CTSK cathepsin K involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:44,599,017...44,623,723
Ensembl chr24:44,598,287...44,623,298
JBrowse link
G FUNDC1 FUN14 domain containing 1 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chr  X:41,685,945...41,705,037 JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) MGI PMID:23707074 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G LOC103232243 prohibitin-2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:67,716,566...67,718,426 JBrowse link
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G LRBA LPS responsive beige-like anchor protein involved_in ISO (PMID:33773106) UniProt PMID:33773106 NCBI chr 7:96,714,031...97,606,153 JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:28017329)
(PMID:19279012)
UniProt
ParkinsonsUK-UCL
PMID:19279012 PMID:28017329 NCBI chr 5:72,762,428...72,774,204
Ensembl chr 5:72,763,050...72,772,770
JBrowse link
G NIPSNAP1 nipsnap homolog 1 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr19:12,429,036...12,454,532
Ensembl chr19:12,428,739...12,454,297
JBrowse link
G NIPSNAP2 nipsnap homolog 2 involved_in ISO (PMID:30982665) UniProt PMID:30982665 NCBI chr21:2,773,970...2,810,977 JBrowse link
G NIPSNAP2 nipsnap homolog 2 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 Ensembl chr21:2,772,818...2,792,962 JBrowse link
G NIPSNAP3A nipsnap homolog 3A involved_in IEA UniProt GO_REF:0000117 NCBI chr12:34,761,926...34,774,306
Ensembl chr12:34,742,810...34,774,968
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:61,351,047...61,393,541
Ensembl chr  X:61,351,054...61,394,305
JBrowse link
G PHB2 prohibitin 2 involved_in ISO (PMID:28017329) UniProt PMID:28017329 NCBI chr11:6,998,517...7,004,437 JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA
ISO
Ensembl
RGD
PMID:25154397 GO_REF:0000107 RGD:12904014 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
ISO PMID:20457763
(PMID:23685073), (PMID:28017329)
(PMID:24949970)
ParkinsonsUK-UCL
UniProt
MGI
PMID:20457763 PMID:23685073 PMID:24949970 PMID:28017329 RGD:10047224 NCBI chr13:88,856,056...90,329,379 JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:89,318,323...90,034,758 JBrowse link
G RETREG1 reticulophagy regulator 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:31446166) MGI
Ensembl
PMID:31446166 GO_REF:0000107 NCBI chr 4:16,153,003...16,297,252
Ensembl chr 4:16,154,694...16,297,161
JBrowse link
G RIMOC1 RAB7A interacting MON1-CCZ1 complex subunit 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:40,661,349...40,678,655
Ensembl chr 4:40,661,323...40,678,740
JBrowse link
G SPATA33 spermatogenesis associated 33 involved_in ISO (PMID:33087875) UniProt PMID:33087875 NCBI chr 5:75,002,037...75,011,305
Ensembl chr 5:75,002,359...75,013,583
JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in IEA Ensembl GO_REF:0000107
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of
IEA
ISO
(PMID:22044588) Ensembl
MGI
PMID:22044588 GO_REF:0000107 NCBI chr11:4,354,911...4,381,762
Ensembl chr11:4,355,053...4,381,273
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of
IEA
ISO
(PMID:22044588) Ensembl
MGI
PMID:22044588 GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:21855797) ParkinsonsUK-UCL PMID:21855797 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
mitophagy by internal vacuole formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPATA18 spermatogenesis associated 18 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 7:16,342,176...16,388,458
Ensembl chr 7:16,340,607...16,387,995
JBrowse link
negative regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC6 histone deacetylase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,927,625...45,951,636
Ensembl chr  X:45,928,092...45,952,929
JBrowse link
G LYPLA1 lysophospholipase 1 involved_in ISO (PMID:37802024) UniProt PMID:37802024 NCBI chr 8:50,120,930...50,171,517 JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BECN1 beclin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27994061) Ensembl
MGI
PMID:27994061 GO_REF:0000107 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23918802) Ensembl
MGI
PMID:23918802 GO_REF:0000107 NCBI chr17:40,123,935...40,141,942
Ensembl chr17:40,124,640...40,141,616
JBrowse link
G FEZ2 fasciculation and elongation protein zeta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:70,822,793...70,899,025
Ensembl chr14:70,822,885...70,865,129
JBrowse link
G LOC103248766 fasciculation and elongation protein zeta-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:116,617,835...116,668,601
Ensembl chr 1:116,617,714...116,668,574
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,490,775...36,634,215
Ensembl chr11:36,492,011...36,634,216
JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23695157) MGI
TreeGrafter
PMID:23695157 GO_REF:0000118 NCBI chr  X:125,151,279...125,250,816
Ensembl chr  X:125,174,289...125,249,588
JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,382,125...26,385,605
Ensembl chr 5:26,382,132...26,385,348
JBrowse link
G PHF23 PHD finger protein 23 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr16:6,609,106...6,613,693
Ensembl chr16:6,609,087...6,613,690
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:13,602,852...13,624,483
Ensembl chr20:13,602,870...13,622,650
JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,358,952...17,367,323
Ensembl chr16:17,359,577...17,366,851
JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr22:61,368,680...61,404,115
Ensembl chr22:61,368,711...61,406,395
JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,420,866...10,658,370
Ensembl chr 5:10,420,931...10,658,507
JBrowse link
G PHF23 PHD finger protein 23 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:6,609,106...6,613,693
Ensembl chr16:6,609,087...6,613,690
JBrowse link
G RUBCN rubicon autophagy regulator involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr15:91,401,565...91,468,837
Ensembl chr15:91,400,031...91,457,933
JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr22:61,368,680...61,404,115
Ensembl chr22:61,368,711...61,406,395
JBrowse link
G UBQLN4 ubiquilin 4 involved_in ISO (PMID:23459205) UniProt PMID:23459205 NCBI chr20:7,811,275...7,829,782 JBrowse link
G UBQLN4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr20:7,811,220...7,821,203 JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1A adrenoceptor alpha 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27994061) Ensembl
MGI
PMID:27994061 GO_REF:0000107 NCBI chr 8:24,884,187...24,985,824
Ensembl chr 8:24,885,741...24,983,125
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:82,704,087...82,730,711
Ensembl chr24:82,704,068...82,727,698
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
JBrowse link
G BECN1 beclin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27994061) Ensembl
MGI
PMID:27994061 GO_REF:0000107 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G BMF Bcl2 modifying factor involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr26:42,893,997...42,915,062
Ensembl chr26:42,894,460...42,915,062
JBrowse link
G CPTP ceramide-1-phosphate transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:130,124,705...130,128,745
Ensembl chr20:130,125,790...130,126,711
JBrowse link
G DAP death associated protein involved_in ISO (PMID:20537536) UniProt PMID:20537536 NCBI chr 4:10,205,447...10,280,004 JBrowse link
G DAPL1 death associated protein like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:44,207,287...44,228,313
Ensembl chr10:44,207,462...44,228,304
JBrowse link
G EIF4E eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chr 7:47,002,522...47,053,060
Ensembl chr 7:47,001,008...47,051,571
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:5,085,326...5,106,551
Ensembl chr15:5,084,780...5,105,288
JBrowse link
G EIF4G2 eukaryotic translation initiation factor 4 gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,017,587...54,029,491
Ensembl chr 1:54,017,696...54,028,843
JBrowse link
G EIF4G3 eukaryotic translation initiation factor 4 gamma 3 NOT|involved_in ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chr20:111,381,420...111,747,248
Ensembl chr20:111,469,837...111,747,416
JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979
JBrowse link
G ERFE erythroferrone involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:124,180,014...124,190,445
Ensembl chr10:124,180,126...124,188,669
JBrowse link
G FOXK1 forkhead box K1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:16,875,747...16,962,813
Ensembl chr28:16,880,884...16,962,734
JBrowse link
G FOXK2 forkhead box K2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:74,426,111...74,506,453
Ensembl chr16:74,426,105...74,503,373
JBrowse link
G GATA4 GATA binding protein 4 ISO RGD PMID:19901028 RGD:5131537 NCBI chr 8:7,348,145...7,432,574
Ensembl chr 8:7,349,660...7,400,562
JBrowse link
G GOLGA2 golgin A2 involved_in ISO (PMID:22735382) ParkinsonsUK-UCL PMID:22735382 NCBI chr12:9,852,442...9,873,536
Ensembl chr12:9,852,461...9,873,767
JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20041218) Ensembl
MGI
PMID:20041218 GO_REF:0000107 NCBI chr26:19,713,780...19,930,807
Ensembl chr26:19,713,617...19,930,937
JBrowse link
G IL10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:22,590,389...22,595,877
Ensembl chr25:22,590,962...22,594,836
JBrowse link
G IL10RA interleukin 10 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,357,081...109,372,557
Ensembl chr 1:109,357,133...109,372,697
JBrowse link
G IL3 interleukin 3 acts_upstream_of_or_within ISO (PMID:15680329) MGI PMID:15680329 NCBI chr23:34,894,630...34,899,105 JBrowse link
G KDM4A lysine demethylase 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:89,108,090...89,164,657
Ensembl chr20:89,073,876...89,164,663
JBrowse link
G KIF25 kinesin family member 25 involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037
G KLHL22 kelch like family member 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:5,211,732...5,264,953
Ensembl chr19:5,218,653...5,265,063
JBrowse link
G LEP leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
JBrowse link
G LEPR leptin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:67,454,205...67,567,524
Ensembl chr20:67,454,334...67,524,229
JBrowse link
G MAGEA3 MAGE family member A3 involved_in ISO (PMID:31267705) UniProt PMID:31267705 NCBI chr  X:127,271,604...127,276,373 JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member involved_in IEA Ensembl GO_REF:0000107
G MTMR8 myotubularin related protein 8 involved_in ISO (PMID:22647598) UniProt PMID:22647598 NCBI chr  X:54,656,054...54,765,846
Ensembl chr  X:54,656,506...54,731,548
JBrowse link
G MTMR9 myotubularin related protein 9 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:7,778,065...7,821,433
Ensembl chr 8:7,783,100...7,821,103
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISO
IEA
RGD
UniProt
Ensembl
PMID:24725502 GO_REF:0000107 GO_REF:0000117 RGD:10040964 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:26601421 RGD:13781888 NCBI chr21:75,160,748...75,195,781
Ensembl chr21:75,158,596...75,196,025
JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,382,125...26,385,605
Ensembl chr 5:26,382,132...26,385,348
JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:27994061) MGI PMID:27994061 NCBI chr 8:134,897,511...135,246,300 JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chr20:19,792,807...19,855,784
Ensembl chr20:19,793,083...19,855,827
JBrowse link
G RASIP1 Ras interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,970,704...41,997,951
Ensembl chr 6:41,991,176...41,996,155
JBrowse link
G RNF5 ring finger protein 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23093945) Ensembl
MGI
PMID:23093945 GO_REF:0000107 NCBI chr17:39,851,491...39,853,912
Ensembl chr17:39,851,874...39,853,819
JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:72,513,593...72,916,950
Ensembl chr16:72,513,619...72,918,416
JBrowse link
G RRAGA Ras related GTP binding A involved_in ISO (PMID:25936802)
(PMID:23263183)
UniProt PMID:23263183 PMID:25936802 NCBI chr12:60,669,841...60,671,482 JBrowse link
G RRAGB Ras related GTP binding B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:51,806,561...51,848,263
Ensembl chr  X:51,806,596...51,848,502
JBrowse link
G RRAGC Ras related GTP binding C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:94,030,875...94,051,776
Ensembl chr20:94,030,961...94,053,653
JBrowse link
G RRAGD Ras related GTP binding D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:14,129,167...14,167,066
Ensembl chr13:14,132,224...14,166,730
JBrowse link
G RUBCN rubicon autophagy regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:91,401,565...91,468,837
Ensembl chr15:91,400,031...91,457,933
JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,493,106...33,518,793
Ensembl chr 6:33,493,079...33,518,647
JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:25049270 RGD:151361107 NCBI chr 5:73,229,953...73,269,801
Ensembl chr 5:73,229,951...73,269,754
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,877,884...63,957,894
Ensembl chr16:63,922,862...63,957,984
JBrowse link
G STK38L serine/threonine kinase 38 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:26,981,109...27,060,560
Ensembl chr11:27,018,534...27,060,579
JBrowse link
G TBC1D14 TBC1 domain family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:43,028,552...43,147,870
Ensembl chr27:43,029,135...43,146,474
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:28802038) ARUK-UCL PMID:28802038 NCBI chr17:30,965,091...30,999,073
Ensembl chr17:30,994,357...30,999,087
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,647,965...43,670,945
Ensembl chr17:43,647,951...43,670,978
JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:46,184,621...46,203,065
Ensembl chr22:46,184,756...46,204,428
JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (PMID:23974797) UniProt PMID:23974797 NCBI chr11:10,075...27,633
Ensembl chr11:8,116...22,842
JBrowse link
G WDR6 WD repeat domain 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,407,421...10,416,295
Ensembl chr22:10,407,703...10,415,633
JBrowse link
G WNK1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:736,668...893,404
Ensembl chr11:737,590...890,762
JBrowse link
G ZKSCAN3 zinc finger with KRAB and SCAN domains 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,199,513...44,216,456
Ensembl chr17:44,200,164...44,216,706
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSA cathepsin A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:17,986,036...17,993,866
Ensembl chr 2:17,984,310...17,993,489
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,083,154...38,194,068
Ensembl chr 7:38,081,509...38,191,479
JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20705711) MGI
Ensembl
PMID:20705711 GO_REF:0000107 NCBI chr19:18,144,466...18,157,944
Ensembl chr19:18,144,545...18,157,971
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,490,775...36,634,215
Ensembl chr11:36,492,011...36,634,216
JBrowse link
G LZTS1 leucine zipper tumor suppressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:18,315,243...18,377,492
Ensembl chr 8:18,315,130...18,324,345
JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25327288)
(PMID:16714284), (PMID:23274896)
MGI
TreeGrafter
Ensembl
PMID:16714284 PMID:23274896 PMID:25327288 GO_REF:0000107 GO_REF:0000118 NCBI chr20:120,522,667...120,678,988
Ensembl chr20:120,525,737...120,679,020
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17468177) MGI
Ensembl
PMID:17468177 GO_REF:0000107 NCBI chr18:56,956,557...57,007,951
Ensembl chr18:56,956,174...57,007,474
JBrowse link
G NRBP2 nuclear receptor binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,051,058...138,059,484
Ensembl chr 8:138,048,903...138,058,553
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24797518) Ensembl
MGI
PMID:24797518 GO_REF:0000107 NCBI chr16:22,113,928...22,124,637
Ensembl chr16:22,110,641...22,124,301
JBrowse link
G QSOX1 quiescin sulfhydryl oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:49,180,365...49,223,814
Ensembl chr25:49,181,365...49,223,741
JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,358,952...17,367,323
Ensembl chr16:17,359,577...17,366,851
JBrowse link
G TSC1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr12:5,195,604...5,249,042
Ensembl chr12:5,195,675...5,244,157
JBrowse link
G TSC2 TSC complex subunit 2 ISO RGD PMID:24599401 RGD:11568679 NCBI chr 5:1,946,534...1,985,168
Ensembl chr 5:1,946,927...1,987,682
JBrowse link
G USP36 ubiquitin specific peptidase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:70,769,133...70,813,274
Ensembl chr16:70,769,797...70,810,844
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chr 5:10,420,866...10,658,370
Ensembl chr 5:10,420,931...10,658,507
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G RNF41 ring finger protein 41 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24949970) MGI
Ensembl
PMID:24949970 GO_REF:0000107 NCBI chr11:52,151,968...52,175,760
Ensembl chr11:52,141,715...52,175,728
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22044588) Ensembl
MGI
PMID:22044588 GO_REF:0000107 NCBI chr11:4,354,911...4,381,762
Ensembl chr11:4,355,053...4,381,273
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22044588) Ensembl
MGI
PMID:22044588 GO_REF:0000107 NCBI chr16:7,047,686...7,065,567
Ensembl chr16:7,045,146...7,066,223
JBrowse link
G TSPO translocator protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:25,678,602...25,690,556
Ensembl chr19:25,686,981...25,690,768
JBrowse link
G USP30 ubiquitin specific peptidase 30 ISO RGD PMID:24896179 RGD:13208875 NCBI chr11:104,254,923...104,292,373
Ensembl chr11:104,255,012...104,290,273
JBrowse link
negative regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTRA2 HtrA serine peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,745,436...32,749,176
Ensembl chr14:32,743,708...32,748,577
JBrowse link
G VPS13C vacuolar protein sorting 13 homolog C involved_in IMP
IEA
(PMID:26942284) ParkinsonsUK-UCL
Ensembl
PMID:26942284 GO_REF:0000107 NCBI chr26:21,463,393...21,647,944
Ensembl chr26:21,463,657...21,648,603
JBrowse link
nucleophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG3 autophagy related 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:68,227,772...68,256,555
Ensembl chr22:68,228,203...68,257,503
JBrowse link
pexophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACBD5 acyl-CoA binding domain containing 5 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:26,795,072...26,844,013
Ensembl chr 9:26,794,822...26,842,134
JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,513,975...72,532,399
Ensembl chr 8:72,514,307...72,517,003
JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:7,255,078...7,286,500
Ensembl chr11:7,256,182...7,274,938
JBrowse link
G PJVK pejvakin involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,004,113...64,013,025
Ensembl chr10:64,005,259...64,014,571
JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
JBrowse link
piecemeal microautophagy of the nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr23:19,073,545...19,087,603
Ensembl chr23:19,072,401...19,087,625
JBrowse link
G ATG13 autophagy related 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:18,651,872...18,712,395
Ensembl chr 1:18,652,998...18,712,482
JBrowse link
G ATG2A autophagy related 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG2B autophagy related 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:74,163,750...74,246,131
Ensembl chr24:74,163,442...74,246,116
JBrowse link
G ATG4A autophagy related 4A cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:95,936,385...96,011,541
Ensembl chr  X:95,983,662...96,010,578
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr10:127,689,882...127,720,226 JBrowse link
G ATG4C autophagy related 4C cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:70,209,536...70,291,750
Ensembl chr20:70,208,716...70,291,718
JBrowse link
G ATG4D autophagy related 4D cysteine peptidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:9,555,792...9,565,295
Ensembl chr 6:9,555,780...9,568,814
JBrowse link
G ATG5 autophagy related 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G ATG9A autophagy related 9A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:105,123,039...105,133,057
Ensembl chr10:105,124,412...105,131,409
JBrowse link
G ATG9B autophagy related 9B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:119,197,387...119,209,578
Ensembl chr21:119,198,125...119,206,599
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:48,726,551...48,818,027
Ensembl chr 8:48,724,393...48,817,928
JBrowse link
G SNX30 sorting nexin family member 30 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:26,650,088...26,774,395
Ensembl chr12:26,656,221...26,774,009
JBrowse link
G SNX7 sorting nexin 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:34,531,399...34,639,958
Ensembl chr20:34,531,151...34,639,107
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:18,335,095...18,434,031
Ensembl chr16:18,335,235...18,433,578
JBrowse link
G ULK3 unc-51 like kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:8,628,289...8,635,465
Ensembl chr26:8,628,454...8,636,092
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG3 BAG cochaperone 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:112,439,954...112,465,875
Ensembl chr 9:112,439,782...112,466,086
JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:22017874) UniProt PMID:22017874 NCBI chr 2:55,982,259...56,047,023 JBrowse link
G HSPB8 heat shock protein family B (small) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,522,236...114,540,186
Ensembl chr11:114,522,248...114,540,477
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,528,097...8,544,512
Ensembl chr 1:8,526,788...8,544,972
JBrowse link
G ZDHHC19 zinc finger DHHC-type palmitoyltransferase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:90,974,291...90,989,857
Ensembl chr15:90,974,703...90,989,006
JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG2A autophagy related 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG7 autophagy related 7 ISO RGD PMID:33372336 RGD:407571673 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G BECN1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chr20:24,357,584...24,365,702 JBrowse link
G LOC103225886 endosome/lysosome-associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:24,339,508...24,429,525
Ensembl chr20:24,339,729...24,380,162
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,623,118...10,677,002
Ensembl chr12:10,622,893...10,676,553
JBrowse link
G MOAP1 modulator of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr24:70,920,083...70,921,138 JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,306,307...22,482,074
Ensembl chr 9:22,306,312...22,481,954
JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:67,391,786...67,429,560
Ensembl chr16:67,406,981...67,427,691
JBrowse link
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:53,499,360...53,511,610
Ensembl chr11:53,499,432...53,509,799
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:19,295,294...19,401,595
Ensembl chr10:19,295,351...19,402,212
JBrowse link
G RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:9,293,791...9,411,950
Ensembl chr25:9,293,838...9,415,319
JBrowse link
G RALB RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:9,999,828...10,041,158
Ensembl chr10:9,999,904...10,016,473
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,707,556...46,746,785
Ensembl chr20:46,707,910...46,746,735
JBrowse link
G SNX18 sorting nexin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,782,842...50,810,220
Ensembl chr 4:50,782,929...50,811,253
JBrowse link
G SNX30 sorting nexin family member 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,650,088...26,774,395
Ensembl chr12:26,656,221...26,774,009
JBrowse link
G SNX4 sorting nexin 4 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr22:55,311,896...55,389,174
Ensembl chr22:55,311,933...55,389,349
JBrowse link
G SNX7 sorting nexin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,531,399...34,639,958
Ensembl chr20:34,531,151...34,639,107
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,893,689...22,906,913
Ensembl chr12:22,894,886...22,896,847
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,183,278...46,188,564
Ensembl chr  X:46,183,443...46,188,536
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,096,027...53,133,828
Ensembl chr16:53,096,023...53,135,010
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:51,445,920...51,447,942
Ensembl chr23:51,446,154...51,447,401
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:69,242,720...69,274,364
Ensembl chr16:69,251,963...69,273,384
JBrowse link
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chr 5:10,420,866...10,658,370
Ensembl chr 5:10,420,931...10,658,507
JBrowse link
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr22:7,388,796...7,466,463
Ensembl chr22:7,388,704...7,466,430
JBrowse link
G IRGM immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chr23:53,449,576...53,451,373 JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,358,952...17,367,323
Ensembl chr16:17,359,577...17,366,851
JBrowse link
G TOM1 target of myb1 membrane trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,062,890...18,110,306
Ensembl chr19:18,062,948...18,111,585
JBrowse link
positive regulation of autophagosome size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELAVL1 ELAV like RNA binding protein 1 ISO RGD PMID:33372336 RGD:407571673 NCBI chr 6:7,419,489...7,448,917
Ensembl chr 6:7,414,757...7,448,445
JBrowse link
positive regulation of autophagosome-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNRF1 zinc and ring finger 1 involved_in ISO (PMID:38360932) FlyBase PMID:38360932 NCBI chr 5:60,568,582...60,590,699 JBrowse link
G ZNRF1 zinc and ring finger 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:52,702,740...52,703,165 JBrowse link
G ZNRF2 zinc and ring finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,930,382...28,097,754
Ensembl chr21:28,014,791...28,096,703
JBrowse link
positive regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor ISO RGD PMID:22293957 RGD:7245565 NCBI chr17:39,847,343...39,851,288
Ensembl chr17:39,847,759...39,851,127
JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in ISO
IEA
RGD
Ensembl
PMID:25117440 GO_REF:0000107 RGD:11552604 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785
JBrowse link
G ATF6 activating transcription factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28747345) MGI
Ensembl
PMID:28747345 GO_REF:0000107 NCBI chr20:2,112,819...2,304,063
Ensembl chr20:2,117,982...2,304,027
JBrowse link
G ATG101 autophagy related 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:48,243,200...48,251,129
Ensembl chr11:48,243,216...48,251,371
JBrowse link
G ATG13 autophagy related 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,651,872...18,712,395
Ensembl chr 1:18,652,998...18,712,482
JBrowse link
G ATG16L1 autophagy related 16 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,286,609...119,331,226
Ensembl chr10:119,286,751...119,333,267
JBrowse link
G ATG5 autophagy related 5 ISO RGD PMID:30715741 RGD:407445920 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902
JBrowse link
G ATG7 autophagy related 7 ISO RGD PMID:22498478 PMID:24674959 PMID:25639566 PMID:33372336 RGD:11553823 RGD:11553824 RGD:407532701 RGD:407571673 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G BECN1 beclin 1 involved_in IEA
ISO
Ensembl
RGD
PMID:21490676 PMID:22498478 PMID:24674959 GO_REF:0000107 RGD:11553823 RGD:407532701 RGD:6483070 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G CCNY cyclin Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,626,185...34,847,835
Ensembl chr 9:34,626,323...34,848,918
JBrowse link
G CDK16 cyclin dependent kinase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:44,405,672...44,416,478
Ensembl chr  X:44,410,598...44,416,818
JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:98,118,948...98,330,435
Ensembl chr12:98,118,603...98,330,471
JBrowse link
G DCN decorin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:86,552,392...86,590,229
Ensembl chr11:86,551,072...86,586,891
JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:14,634,836...14,798,050
Ensembl chr19:14,635,947...14,787,591
JBrowse link
G DEPTOR DEP domain containing MTOR interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:114,442,212...114,626,411
Ensembl chr 8:114,442,379...114,625,171
JBrowse link
G DHRSX dehydrogenase/reductase X-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:315,984...359,879 JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 ISO RGD PMID:33372336 RGD:407571673 NCBI chr 6:7,419,489...7,448,917
Ensembl chr 6:7,414,757...7,448,445
JBrowse link
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:9,322,828...9,326,833
Ensembl chr12:9,322,892...9,326,549
JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:16,245,840...16,271,465
Ensembl chr16:16,245,715...16,267,698
JBrowse link
G FOXO1 forkhead box O1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,916,849...19,027,776
Ensembl chr 3:18,920,651...19,027,707
JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:65,175,764...65,303,107
Ensembl chr13:65,195,376...65,301,725
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,434,966...36,447,676
Ensembl chr 6:36,435,578...36,447,633
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (PMID:26160071)
(PMID:22539723)
BHF-UCL
UniProt
PMID:22539723 PMID:26160071 NCBI chr22:60,732,449...61,002,735
Ensembl chr22:60,733,465...60,997,239
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (PMID:20819940) RGD
UniProt
PMID:20819940 PMID:23604926 RGD:10402086 NCBI chr 3:9,353,333...9,357,765 JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,785,493...63,791,071
Ensembl chr11:63,786,041...63,790,473
JBrowse link
G IRGM immunity related GTPase M involved_in ISO (PMID:16888103), (PMID:25891078), (PMID:28389568)
(PMID:19620982), (PMID:22874556), (PMID:24751652)
(PMID:25891078), (PMID:29420192)
UniProt PMID:16888103 PMID:19620982 PMID:22874556 PMID:24751652 PMID:25891078 More... NCBI chr23:53,449,576...53,451,373 JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,528,097...8,544,512
Ensembl chr 1:8,526,788...8,544,972
JBrowse link
G LOC103231531 translation initiation factor IF-2 involved_in ISO (PMID:25076851) UniProt PMID:25076851 NCBI chr  X:315,705...618,961 JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,490,775...36,634,215
Ensembl chr11:36,492,011...36,634,216
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:26581593 RGD:12879823 NCBI chr26:17,059,122...17,168,787
Ensembl chr26:17,060,054...17,168,782
JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:35078016 RGD:155804282 NCBI chr13:15,284,927...15,360,539
Ensembl chr13:15,284,923...15,360,832
JBrowse link
G MEFV MEFV innate immunity regulator, pyrin involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chr 5:2,971,323...2,991,501 JBrowse link
G MEFV MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:2,971,419...2,981,911 JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,664,705...95,760,256
Ensembl chr  X:95,665,380...95,764,762
JBrowse link
G MTDH metadherin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:92,563,480...92,641,874
Ensembl chr 8:92,563,550...92,640,231
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,907,628...27,957,621
Ensembl chr21:27,926,710...27,957,619
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,492,158...36,531,766
Ensembl chr 5:36,496,414...36,530,499
JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr22:11,736,772...11,739,128 JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:40,674...94,265
Ensembl chr 5:43,150...94,174
JBrowse link
G OPTN optineurin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:13,142,036...13,176,996
Ensembl chr 9:13,150,426...13,177,021
JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28747345) MGI
Ensembl
PMID:28747345 GO_REF:0000107 NCBI chr16:66,243,503...66,249,800
Ensembl chr16:66,243,539...66,250,167
JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:47,759,850...47,874,458
Ensembl chr 1:47,795,954...47,877,028
JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:17476689) UniProt PMID:17476689 NCBI chr  X:46,032,640...46,040,220 JBrowse link
G PLEKHF1 pleckstrin homology and FYVE domain containing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:24,732,774...24,743,636
Ensembl chr 6:24,742,024...24,742,863
JBrowse link
G PLK2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:54,629,868...54,636,134
Ensembl chr 4:54,629,194...54,636,032
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:39,516,307...39,553,627 JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:76,258,063...76,319,512
Ensembl chr20:76,259,763...76,319,430
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:48,726,551...48,818,027
Ensembl chr 8:48,724,393...48,817,928
JBrowse link
G RNF152 ring finger protein 152 involved_in IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr18:17,872,141...17,952,989
Ensembl chr18:17,949,253...17,949,864
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:59,384,822...59,538,780
Ensembl chr18:59,384,944...59,540,070
JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:8,421,178...8,567,221
Ensembl chr22:8,420,960...8,567,201
JBrowse link
G SH3BP4 SH3 domain binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:120,974,110...121,075,584
Ensembl chr10:121,054,665...121,073,708
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,707,556...46,746,785
Ensembl chr20:46,707,910...46,746,735
JBrowse link
G SLC35D3 solute carrier family 35 member D3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:36,475,017...36,478,506
Ensembl chr13:36,475,981...36,478,292
JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:31221056 RGD:150521664 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709
JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:81,536,271...81,571,061
Ensembl chr23:81,558,082...81,574,830
JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:973,033...996,857
Ensembl chr 6:974,144...995,136
JBrowse link
G SVIP small VCP interacting protein involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:42,185,115...42,193,121
Ensembl chr 1:42,185,121...42,195,006
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,136,162...60,182,354
Ensembl chr11:60,136,232...60,182,344
JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,425,893...30,478,954
Ensembl chr17:30,426,260...30,479,124
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,526,719...4,543,251
Ensembl chr 6:4,527,033...4,529,168
JBrowse link
G TMEM59 transmembrane protein 59 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:78,884,722...78,907,954
Ensembl chr20:78,884,768...78,907,476
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:89,893,531...89,918,054
Ensembl chr 8:89,893,419...89,908,228
JBrowse link
G TPCN1 two pore segment channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:108,459,754...108,549,933
Ensembl chr11:108,475,380...108,552,374
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:62,451,808...62,460,658
Ensembl chr 1:62,451,830...62,460,659
JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:61,018,252...61,036,690
Ensembl chr 1:61,019,464...61,036,548
JBrowse link
G TRIM23 tripartite motif containing 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:61,781,880...61,816,670
Ensembl chr 4:61,784,002...61,816,638
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,893,689...22,906,913
Ensembl chr12:22,894,886...22,896,847
JBrowse link
G TRIM65 tripartite motif containing 65 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:45,790,271...45,798,852
Ensembl chr16:45,791,865...45,797,952
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:95,671,622...95,686,701
Ensembl chr 9:95,672,648...95,689,247
JBrowse link
G TSC2 TSC complex subunit 2 involved_in ISO (PMID:23878245) ParkinsonsUK-UCL PMID:23878245 NCBI chr 5:1,946,534...1,985,168
Ensembl chr 5:1,946,927...1,987,682
JBrowse link
G UBR4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:113,354,561...113,493,936
Ensembl chr20:113,355,676...113,494,386
JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in ISO (PMID:25952549) UniProt PMID:25952549 NCBI chr13:77,357,239...77,387,385
Ensembl chr13:77,357,141...77,387,367
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:18,335,095...18,434,031
Ensembl chr16:18,335,235...18,433,578
JBrowse link
G USP20 ubiquitin specific peptidase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,256,835...8,301,063
Ensembl chr12:8,258,365...8,301,020
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:23184933) UniProt PMID:23184933 NCBI chr19:11,670,605...11,677,168 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:95,388,469...95,398,305
Ensembl chr20:95,388,477...95,397,960
JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L11 BCL2 like 11 ISO RGD PMID:25772147 RGD:13782257 NCBI chr14:14,178,159...14,205,337 JBrowse link
G DDIT3 DNA damage inducible transcript 3 ISO RGD PMID:25772147 RGD:13782257 NCBI chr11:53,424,693...53,429,094
Ensembl chr11:53,424,868...53,425,576
JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:23698117 RGD:11561968 NCBI chr 9:124,570,958...124,586,002
Ensembl chr 9:124,568,695...124,585,980
JBrowse link
G FBXO7 F-box protein 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:15,300,135...15,324,256
Ensembl chr19:15,300,158...15,323,956
JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLK3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:87,989,573...87,995,396
Ensembl chr20:87,989,574...87,994,478
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:51,445,920...51,447,942
Ensembl chr23:51,446,154...51,447,401
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 NCBI chr20:104,521,131...104,544,161
Ensembl chr20:104,521,132...104,544,001
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25332431) MGI
Ensembl
PMID:25332431 GO_REF:0000107 NCBI chr12:102,475,437...102,551,401
Ensembl chr12:102,475,415...102,551,322
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chr24:54,769,072...54,876,963 JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr24:54,769,340...54,823,210 JBrowse link
positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chr 9:124,570,958...124,586,002
Ensembl chr 9:124,568,695...124,585,980
JBrowse link
G BNIP3L BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chr 8:24,497,311...24,521,424
Ensembl chr 8:24,497,351...24,523,553
JBrowse link
G DCN decorin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr11:86,552,392...86,590,229
Ensembl chr11:86,551,072...86,586,891
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20453062) MGI
Ensembl
PMID:20453062 GO_REF:0000107 NCBI chr13:26,152,974...26,266,676
Ensembl chr13:26,153,319...26,264,568
JBrowse link
G GNAI1 G protein subunit alpha i1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:68,687,809...68,770,415
Ensembl chr21:68,687,307...68,770,360
JBrowse link
G GNAI3 G protein subunit alpha i3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:23,950,819...24,000,069
Ensembl chr20:23,954,384...23,999,072
JBrowse link
G GPSM1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chr12:1,845,882...1,877,400
Ensembl chr12:1,847,233...1,877,265
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19273585) Ensembl
MGI
PMID:19273585 GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288
JBrowse link
G HMOX1 heme oxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20705711) MGI
Ensembl
PMID:20705711 GO_REF:0000107 NCBI chr19:18,144,466...18,157,944
Ensembl chr19:18,144,545...18,157,971
JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chr  X:128,781,975...128,816,039
Ensembl chr  X:128,787,785...128,806,083
JBrowse link
G IL4 interleukin 4 involved_in ISO (PMID:26416964) UniProt PMID:26416964 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr 7:13,435,059...13,482,236
Ensembl chr 7:13,435,096...13,482,771
JBrowse link
G LACRT lacritin involved_in ISO (PMID:23640897) FlyBase PMID:23640897 NCBI chr11:50,746,437...50,752,631 JBrowse link
G LACRT lacritin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,746,518...50,750,513 JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:57,126,878...57,265,243
Ensembl chr23:57,238,336...57,261,710
JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chr13:15,284,927...15,360,539
Ensembl chr13:15,284,923...15,360,832
JBrowse link
G PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,514,443...108,542,495
Ensembl chr 1:108,514,172...108,544,049
JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:17476689) MGI PMID:17476689 NCBI chr  X:46,032,640...46,040,220 JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G RAB12 RAB12, member RAS oncogene family involved_in ISO (PMID:23357852) UniProt PMID:23357852 NCBI chr18:67,572,529...67,600,646
Ensembl chr18:67,572,519...67,601,428
JBrowse link
G RUFY4 RUN and FYVE domain containing 4 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:103,958,208...103,979,948
Ensembl chr10:103,958,495...103,979,410
JBrowse link
G SCOC short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr 7:87,326,672...87,336,034 JBrowse link
G SESN1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:64,756,393...64,864,795
Ensembl chr13:64,841,773...64,863,698
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:104,521,131...104,544,161
Ensembl chr20:104,521,132...104,544,001
JBrowse link
G SESN3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:86,426,258...86,486,465
Ensembl chr 1:86,427,988...86,486,477
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr23:42,153,576...42,160,903
Ensembl chr23:42,153,026...42,160,907
JBrowse link
G SUPT5H SPT5 homolog, DSIF elongation factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,052,587...34,086,022
Ensembl chr 6:34,052,577...34,085,782
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI