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ONTOLOGY REPORT - ANNOTATIONS


Term:phagocytosis, engulfment
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Accession:GO:0006911 term browser browse the term
Definition:The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis.
Synonyms:related_synonym: phagosome biosynthesis;   phagosome formation


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phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034739.1 Ig lambda-2 chain C region involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:86,092,468...86,092,779 JBrowse link
G AABR07065640.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,506,718...138,507,294 JBrowse link
G AABR07065643.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,535,670...138,536,321 JBrowse link
G AABR07065645.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,549,564...138,550,576 JBrowse link
G AABR07065645.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,564,828...138,565,404 JBrowse link
G AABR07065651.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,735,742...138,736,203 JBrowse link
G AABR07065651.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,772,045...138,772,894 JBrowse link
G AABR07065651.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,764,502...138,764,901 JBrowse link
G AABR07065651.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,631,604...138,631,997 JBrowse link
G AABR07065651.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,679,089...138,679,665 JBrowse link
G AABR07065651.6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,744,049...138,744,480 JBrowse link
G AABR07065651.7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,639,759...138,640,187 JBrowse link
G AABR07065651.8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,685,363...138,685,656 JBrowse link
G AABR07065656.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,040,963...139,041,812 JBrowse link
G AABR07065656.10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,908,677...138,909,105 JBrowse link
G AABR07065656.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,948,007...138,948,583 JBrowse link
G AABR07065656.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,900,522...138,900,915 JBrowse link
G AABR07065656.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,004,388...139,004,983 JBrowse link
G AABR07065656.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,012,967...139,102,378 JBrowse link
G AABR07065656.6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,033,420...139,033,819 JBrowse link
G AABR07065656.7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,953,951...138,954,741 JBrowse link
G AABR07065656.8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,930,633...138,931,429 JBrowse link
G AABR07065656.9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,852,141...138,852,571 JBrowse link
G AABR07065673.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,158,334...139,158,765 JBrowse link
G AABR07065676.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,177,200...139,177,631 JBrowse link
G AABR07065680.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,209,936...139,210,367 JBrowse link
G AABR07065684.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,293,130...139,293,926 JBrowse link
G AABR07065688.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,345,486...139,345,914 JBrowse link
G AABR07065693.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,412,169...139,412,745 JBrowse link
G AABR07065693.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,428,999...139,429,783 JBrowse link
G AABR07065693.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,405,966...139,406,844 JBrowse link
G AABR07065699.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,560,028...139,560,489 JBrowse link
G AABR07065699.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,531,330...139,531,729 JBrowse link
G AABR07065699.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,551,751...139,552,182 JBrowse link
G AABR07065699.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,486,775...139,487,576 JBrowse link
G AABR07065699.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,523,337...139,524,186 JBrowse link
G AABR07065705.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,636,594...139,637,354 JBrowse link
G AABR07065705.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,746,888...139,747,737 JBrowse link
G AABR07065705.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,718,892...139,719,323 JBrowse link
G AABR07065705.6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,654,077...139,654,508 JBrowse link
G AABR07065714.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,783,839...139,911,839 JBrowse link
G AABR07065737.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,972,140...139,973,811 JBrowse link
G AABR07065740.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,997,178...139,997,537 JBrowse link
G AABR07065750.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,215,386...140,216,072 JBrowse link
G AABR07065750.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,101,861...140,102,325 JBrowse link
G AABR07065753.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,266,079...140,266,507 JBrowse link
G AABR07065768.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,485,452...140,485,913 JBrowse link
G AABR07065768.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,416,650...140,418,831 JBrowse link
G AABR07065768.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,406,876...140,407,307 JBrowse link
G AABR07065772.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,571,595...140,572,023 JBrowse link
G AABR07065772.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,641,757...140,642,221 JBrowse link
G AABR07065772.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,585,071...140,587,251 JBrowse link
G AABR07065773.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,714,676...140,715,174 JBrowse link
G AABR07065774.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,805,046...140,805,551 JBrowse link
G AABR07065776.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,833,610...140,834,159 JBrowse link
G AABR07065776.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,879,774...140,880,070 JBrowse link
G AABR07065778.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,979,710...140,980,193 JBrowse link
G AABR07065778.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,008,140...141,008,427 JBrowse link
G AABR07065778.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,062,124...141,062,581 JBrowse link
G AABR07065781.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,146,719...141,147,264 JBrowse link
G AABR07065782.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,198,248...141,198,565 JBrowse link
G AABR07065789.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,290,922...141,291,347 JBrowse link
G AABR07065789.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,364,359...141,365,198 JBrowse link
G AABR07065789.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,320,809...141,321,108 JBrowse link
G AABR07065790.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,383,872...141,384,305 JBrowse link
G AABR07065792.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,487,555...141,488,290 JBrowse link
G AABR07065792.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,472,292...141,472,746 JBrowse link
G AABR07065798.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,715,354...141,715,846 JBrowse link
G AABR07065802.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,831,336...141,831,632 JBrowse link
G AABR07065804.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,866,364...141,866,756 JBrowse link
G AABR07065808.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,957,036...141,957,537 JBrowse link
G AABR07065811.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,059,736...142,060,032 JBrowse link
G AABR07065812.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,251,680...142,251,976 JBrowse link
G AABR07065812.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,177,345...142,178,771 JBrowse link
G AABR07065813.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,299,568...142,299,996 JBrowse link
G AABR07065814.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,418,316...142,418,800 JBrowse link
G AABR07065814.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,352,806...142,353,308 JBrowse link
G AABR07065814.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,371,639...142,372,031 JBrowse link
G AABR07065814.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,533,676...142,534,112 JBrowse link
G AABR07065814.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,479,319...142,479,939 JBrowse link
G AABR07065814.7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,385,310...142,385,773 JBrowse link
G AABR07065815.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,584,754...142,585,188 JBrowse link
G AABR07065815.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,635,329...142,676,432 JBrowse link
G AABR07065823.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,992,767...142,993,147 JBrowse link
G AABR07065823.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,932,678...142,933,110 JBrowse link
G AABR07065823.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,903,147...142,903,440 JBrowse link
G AABR07065827.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,065,206...143,065,639 JBrowse link
G AABR07065834.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,130,685...143,131,118 JBrowse link
G AABR07065837.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,194,515...143,195,445 JBrowse link
G AABR07065839.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,206,479...143,206,772 JBrowse link
G AABR07065844.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,228,835...143,230,111 JBrowse link
G AABR07065877.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,536,737...143,537,030 JBrowse link
G AABR07065883.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,590,014...143,590,448 JBrowse link
G AABR07065886.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,701,600...143,702,033 JBrowse link
G AABR07065889.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,768,677...143,768,985 JBrowse link
G Abca1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within ISO MGI:1935192 (MGI:1860694|PMID:10878804) RGD PMID:10878804 MGI:1860694 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G AC109737.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:70,828,894...70,830,344 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:5908515|PMID:26838550) RGD PMID:26838550 MGI:5908515 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5315376|PMID:10934045)
UniProt
RGD
PMID:10934045 GO_REF:0000024 MGI:5315376 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448
JBrowse link
G Arhgap12 Rho GTPase activating protein 12 involved_in ISO (PMID:26465210) RGD PMID:26465210 NCBI chr17:54,280,815...54,394,716
Ensembl chr17:54,280,851...54,394,634
JBrowse link
G Arhgap25 Rho GTPase activating protein 25 involved_in IBA
ISO
PMID:21873635
(PMID:26465210)
RGD PMID:26465210, PMID:21873635 RGD:13792537 NCBI chr 4:119,249,682...119,327,822
Ensembl chr 4:119,249,682...119,327,822
JBrowse link
G Bin2 bridging integrator 2 involved_in IBA
ISO
PMID:21873635
(PMID:23285027)
RGD PMID:23285027, PMID:21873635 RGD:13792537 NCBI chr 7:142,273,832...142,304,731
Ensembl chr 7:142,273,833...142,300,382
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO
ISS
(PMID:26465210)
GO_REF:0000024
RGD
UniProt
PMID:26465210 GO_REF:0000024 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2447864 (MGI:3663198|PMID:16522634)
Ensembl
RGD
PMID:16522634 GO_REF:0000107 MGI:3663198 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Dppa1 developmental pluripotency associated 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,693,219...31,712,924
Ensembl chr10:31,693,219...31,712,924
JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in ISO UniProtKB:P46108|UniProtKB:Q14185 (PMID:11595183) RGD PMID:11595183 NCBI chr17:46,352,102...46,888,788
Ensembl chr17:46,353,330...46,794,845
JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO MGI:1857165|MGI:2384004 (MGI:2177393|PMID:11901193), (MGI:2679189|PMID:11911823), (MGI:2683721|PMID:11237803) RGD PMID:11237803 PMID:11901193 PMID:11911823 MGI:2177393 MGI:2679189 MGI:2683721 NCBI chr13:89,601,894...89,606,326
Ensembl chr13:89,601,896...89,606,326
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia acts_upstream_of_or_within ISO MGI:2664927|MGI:2679238 (MGI:2664488|PMID:11911824), (MGI:2679188|PMID:9551950), (MGI:2679189|PMID:11911823) RGD PMID:9551950 PMID:11911823 PMID:11911824 MGI:2664488 MGI:2679188 MGI:2679189 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa acts_upstream_of_or_within ISO MGI:1861924 (MGI:2683747|PMID:9834201), (MGI:2683749|PMID:9743367), (MGI:82508|PMID:8769481) RGD PMID:8769481 PMID:9743367 PMID:9834201 MGI:2683747 MGI:2683749 MGI:82508 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (MGI:82508|PMID:8769481) RGD PMID:8769481 MGI:82508 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Gsn gelsolin involved_in ISO (MGI:5619440|PMID:23325791) RGD PMID:23325791 MGI:5619440 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
G Gulp1 GULP PTB domain containing engulfment adaptor 1 involved_in ISO (PMID:11729193) RGD PMID:11729193 NCBI chr 9:51,263,484...51,538,066
Ensembl chr 9:51,263,622...51,538,072
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18414680, PMID:21873635 RGD:2316597, RGD:13792537 NCBI chr10:31,813,819...31,860,934
Ensembl chr10:31,813,814...31,848,379
JBrowse link
G IgG-2a gamma-2a immunoglobulin heavy chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igh-6 immunoglobulin heavy chain 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,092,131...138,093,643 JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2177393|PMID:11901193), (MGI:2664488|PMID:11911824), (MGI:2679188|PMID:9551950), (MGI:2679189|PMID:11911823), (MGI:2683747|PMID:9834201), (MGI:2683749|PMID:9743367), (MGI:82508|PMID:8769481)
RGD PMID:8769481 PMID:9551950 PMID:9743367 PMID:9834201 PMID:11901193 PMID:11911823 PMID:11911824, PMID:21873635 MGI:2177393 MGI:2664488 MGI:2679188 MGI:2679189 MGI:2683747 MGI:2683749 MGI:82508, RGD:13792537 NCBI chr 6:139,140,572...139,784,388
Ensembl chr 6:139,140,679...139,142,218
JBrowse link
G Ighm immunoglobulin heavy constant mu involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Ighv1-58 immunoglobulin heavy variable 1-58 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,791,766...142,880,382 JBrowse link
G Igkc immunoglobulin kappa constant involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igll1 immunoglobulin lambda-like polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:88,388,378...88,391,524
Ensembl chr11:88,388,378...88,391,370
JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (MGI:5319446|PMID:22438044), (MGI:5905548|PMID:20199584), (MGI:6189359|PMID:22632727) RGD PMID:20199584 PMID:22438044 PMID:22632727 MGI:5319446 MGI:5905548 MGI:6189359 NCBI chr 1:199,495,312...199,545,738
Ensembl chr 1:199,495,298...199,623,960
JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5905548|PMID:20199584) RGD PMID:20199584 MGI:5905548 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G LOC100359530 rCG21044-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,930,894...138,931,525 JBrowse link
G LOC100359684 mCG114411-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,406,777...140,407,357 JBrowse link
G LOC100359777 mCG12681-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,603,613...31,620,449
Ensembl chr10:31,603,613...31,620,443
JBrowse link
G LOC100360344 hypothetical protein LOC100360344 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,292,970...139,293,665 JBrowse link
G LOC100360436 hypothetical LOC100360436 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,345,463...139,346,007 JBrowse link
G LOC100360628 rCG58847-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,660,026...139,660,764 JBrowse link
G LOC100360761 rCG64219-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,979,689...140,980,243 JBrowse link
G LOC100361105 Igh protein-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:141,146,691...141,147,268 JBrowse link
G LOC100361706 lambda-chain C1-region-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,094,822...86,096,399
Ensembl chr11:86,094,567...86,096,397
JBrowse link
G LOC100361945 mCG129376-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,486,687...139,487,301 JBrowse link
G LOC100365649 hypothetical LOC100365649 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,743,974...138,744,542 JBrowse link
G LOC362795 immunoglobulin G heavy chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,192,156...138,201,560 JBrowse link
G LOC689968 similar to kidney injury molecule 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,647,519...31,661,204
Ensembl chr10:31,647,898...31,661,344
JBrowse link
G LOC691815 Ig heavy chain V region PJ14-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,714,720...140,715,176 JBrowse link
G Marco macrophage receptor with collagenous structure involved_in IMP PMID:15987691 ARUK-UCL PMID:15987691 RGD:13432286 NCBI chr16:85,115,199...85,147,683
Ensembl chr16:85,115,201...85,135,859
JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2681272|PMID:12000961)
Ensembl
RGD
PMID:12000961 GO_REF:0000107 MGI:2681272 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894
JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO UniProtKB:P01027|UniProtKB:P05555 (MGI:5319446|PMID:22438044) RGD PMID:22438044 MGI:5319446 NCBI chr16:56,817,714...56,900,025
Ensembl chr16:56,813,791...56,900,052
JBrowse link
G Myh9 myosin, heavy chain 9 involved_in ISO (MGI:5619440|PMID:23325791) RGD PMID:23325791 MGI:5619440 NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:5315376|PMID:10934045) RGD PMID:10934045 MGI:5315376 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G RGD1564318 similar to immunoglobulin light chain variable region involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Sh3bp1 SH3-domain binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:26465210)
UniProt
RGD
PMID:26465210 GO_REF:0000024 NCBI chr 7:120,125,747...120,138,148
Ensembl chr 7:120,125,633...120,138,196
JBrowse link
G Sirpa signal-regulatory protein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2680858|PMID:14634079)
Ensembl
RGD
PMID:14634079 GO_REF:0000107 MGI:2680858 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:31,755,473...31,796,423
Ensembl chr10:31,755,510...31,790,263
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3830759|PMID:19155473)
(MGI:5606096|PMID:24990881)
RGD PMID:19155473 PMID:24990881 MGI:3830759 MGI:5606096 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 acts_upstream_of_or_within ISO (MGI:3830759|PMID:19155473) RGD PMID:19155473 MGI:3830759 NCBI chr 9:14,668,691...14,707,122
Ensembl chr 9:14,685,900...14,706,557
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 involved_in IDA PMID:15133481 UniProt PMID:15133481 RGD:4892614 NCBI chr12:18,996,566...19,033,714
Ensembl chr12:18,996,591...19,030,381
JBrowse link
engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO
IBA
(PMID:24509909)
(MGI:3764740|PMID:17960134)
PMID:21873635
RGD PMID:17960134 PMID:24509909, PMID:21873635 MGI:3764740, RGD:13792537 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Becn1 beclin 1 involved_in ISO (MGI:5619450|PMID:22393062) RGD PMID:22393062 MGI:5619450 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Megf10 multiple EGF-like domains 10 acts_upstream_of_or_within ISO MGI:4454190 (MGI:5775214|PMID:27170117) RGD PMID:27170117 MGI:5775214 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IBA
ISO
PMID:21873635
(MGI:4943793|PMID:20691665)
RGD PMID:20691665, PMID:21873635 MGI:4943793, RGD:13792537 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rac2 Rac family small GTPase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:119,769,708...119,797,111
Ensembl chr 7:119,783,849...119,797,098
JBrowse link
G Rhobtb1 Rho-related BTB domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:20,638,579...20,715,437
Ensembl chr20:20,638,579...20,713,128
JBrowse link
G Rhobtb2 Rho-related BTB domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,465,148...51,485,562
Ensembl chr15:51,465,148...51,485,692
JBrowse link
G Rhog ras homolog family member G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:167,336,147...167,347,720
Ensembl chr 1:167,335,248...167,347,671
JBrowse link
G Rhoh ras homolog family member H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:43,961,756...43,992,587
Ensembl chr14:43,961,756...43,992,587
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Xkr4 XK related 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:15,746,012...16,141,059
Ensembl chr 5:15,747,614...16,140,896
JBrowse link
G Xkr5 XK related 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,744,786...75,762,694
Ensembl chr16:75,744,786...75,762,693
JBrowse link
G Xkr6 XK related 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:46,784,963...47,173,352
Ensembl chr15:46,784,963...47,173,335
JBrowse link
G Xkr7 XK related 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:148,508,622...148,537,904
Ensembl chr 3:148,510,779...148,533,404
JBrowse link
G Xkr8 XK related 8 involved_in ISO
IBA
(PMID:23845944)
PMID:21873635
RGD PMID:23845944, PMID:21873635 RGD:13792537 NCBI chr 5:150,918,600...150,925,727
Ensembl chr 5:150,918,603...150,925,727
JBrowse link
G Xkr9 XK related 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:4,946,332...4,975,436
Ensembl chr 5:4,946,006...4,975,436
JBrowse link
negative regulation of phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a Cd300a molecule involved_in ISO (PMID:22302738) RGD PMID:22302738 NCBI chr10:103,437,978...103,451,170
Ensembl chr10:103,438,303...103,450,947
JBrowse link
G Siglec8 sialic acid binding Ig-like lectin 8 acts_upstream_of_or_within ISO (MGI:5529741|PMID:24227736) RGD PMID:24227736 MGI:5529741 NCBI chr 1:99,576,946...99,587,441
Ensembl chr 1:99,578,372...99,587,205
JBrowse link
positive regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:3662940|PMID:16908670)
Alzheimers_University_of_Toronto
RGD
PMID:16908670 GO_REF:0000024 MGI:3662940 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:24990881) RGD PMID:24990881 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
positive regulation of phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IMP RGD PMID:23238794 RGD:8696010 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Ano6 anoctamin 6 involved_in ISO (MGI:5634870|PMID:25651887) RGD PMID:25651887 MGI:5634870 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (MGI:6271154|PMID:25568335) RGD PMID:25568335 MGI:6271154 NCBI chr 7:26,256,179...26,306,128
Ensembl chr 7:26,256,459...26,306,126
JBrowse link
G C3 complement C3 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P05555 (MGI:5319446|PMID:22438044), (MGI:5905548|PMID:20199584), (MGI:6189359|PMID:22632727)
Ensembl
RGD
PMID:20199584 PMID:22438044 PMID:22632727 GO_REF:0000107 MGI:5319446 MGI:5905548 MGI:6189359 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:2447190 (MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia IMP RGD PMID:19657115 RGD:9685698 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Gata2 GATA binding protein 2 IMP RGD PMID:12933836 RGD:632788 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:9284952 RGD:2307413 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Lbp lipopolysaccharide binding protein IDA RGD PMID:11104656 RGD:9685187 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO
GO_REF:0000024
(MGI:3818191|PMID:19015308)
UniProt
RGD
PMID:19015308 GO_REF:0000024 MGI:3818191 NCBI chr 7:145,068,239...145,113,507
Ensembl chr 7:145,068,286...145,113,507
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:15940641 RGD:8553017 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Rab31 RAB31, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(MGI:6271154|PMID:25568335)
UniProt
RGD
PMID:25568335 GO_REF:0000024 MGI:6271154 NCBI chr 9:113,370,072...113,504,606
Ensembl chr 9:113,370,033...113,504,605
JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:3831067 NCBI chr14:23,575,400...23,604,984
Ensembl chr14:23,576,085...23,604,834
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IBA
ISO
PMID:21873635
(MGI:6304666|PMID:25631124)
(PMID:28855300)
RGD PMID:25631124 PMID:28855300, PMID:21873635 MGI:6304666, RGD:13792537 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
ISO
GO_REF:0000024
(MGI:5436199|PMID:22503541), (MGI:5508294|PMID:11278875)
UniProt
RGD
PMID:11278875 PMID:22503541 GO_REF:0000024 MGI:5436199 MGI:5508294 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    cellular process 18481
      vesicle-mediated transport 1670
        phagocytosis 351
          phagocytosis, engulfment 180
            cytoskeletal rearrangement involved in phagocytosis, engulfment 0
            engulfment of apoptotic cell + 19
            membrane reorganization involved in phagocytosis, engulfment 0
            negative regulation of phagocytosis, engulfment + 2
            positive regulation of phagocytosis, engulfment + 16
            regulation of phagocytosis, engulfment + 19
Path 2
Term Annotations click to browse term
  biological_process 19634
    cellular process 18481
      cellular component organization or biogenesis 6713
        cellular component organization 6470
          membrane organization 873
            membrane invagination 197
              plasma membrane invagination 189
                phagocytosis, engulfment 180
                  cytoskeletal rearrangement involved in phagocytosis, engulfment 0
                  engulfment of apoptotic cell + 19
                  membrane reorganization involved in phagocytosis, engulfment 0
                  negative regulation of phagocytosis, engulfment + 2
                  positive regulation of phagocytosis, engulfment + 16
                  regulation of phagocytosis, engulfment + 19
paths to the root