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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytosis, recognition
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Accession:GO:0006910 term browser browse the term
Definition:The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell.
Comment:Note that cell surface molecules involved in the direct binding of bacteria may be also annotated to the molecular function term 'bacterial cell surface binding ; GO:0051635'. Note that cell surface molecules involved in the direct binding to opsonins such as complement components or antibodies may be also annotated to the term 'opsonin binding ; GO:0001846'.
Synonyms:exact_synonym: recognition of phagocytosed substance by phagocytic cell

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phagocytosis, recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034739.1 Ig lambda-2 chain C region involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:86,092,468...86,092,779 JBrowse link
G AABR07065640.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,506,718...138,507,294 JBrowse link
G AABR07065643.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,535,670...138,536,321 JBrowse link
G AABR07065645.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,549,564...138,550,576 JBrowse link
G AABR07065645.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,564,828...138,565,404 JBrowse link
G AABR07065651.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,735,742...138,736,203 JBrowse link
G AABR07065651.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,772,045...138,772,894 JBrowse link
G AABR07065651.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,764,502...138,764,901 JBrowse link
G AABR07065651.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,631,604...138,631,997 JBrowse link
G AABR07065651.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,679,089...138,679,665 JBrowse link
G AABR07065651.6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,744,049...138,744,480 JBrowse link
G AABR07065651.7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,639,759...138,640,187 JBrowse link
G AABR07065651.8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,685,363...138,685,656 JBrowse link
G AABR07065656.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,040,963...139,041,812 JBrowse link
G AABR07065656.10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,908,677...138,909,105 JBrowse link
G AABR07065656.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,948,007...138,948,583 JBrowse link
G AABR07065656.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,900,522...138,900,915 JBrowse link
G AABR07065656.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,004,388...139,004,983 JBrowse link
G AABR07065656.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,012,967...139,102,378 JBrowse link
G AABR07065656.6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,033,420...139,033,819 JBrowse link
G AABR07065656.7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,953,951...138,954,741 JBrowse link
G AABR07065656.8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,930,633...138,931,429 JBrowse link
G AABR07065656.9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,852,141...138,852,571 JBrowse link
G AABR07065673.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,158,334...139,158,765 JBrowse link
G AABR07065676.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,177,200...139,177,631 JBrowse link
G AABR07065680.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,209,936...139,210,367 JBrowse link
G AABR07065684.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,293,130...139,293,926 JBrowse link
G AABR07065688.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,345,486...139,345,914 JBrowse link
G AABR07065693.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,412,169...139,412,745 JBrowse link
G AABR07065693.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,428,999...139,429,783 JBrowse link
G AABR07065693.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,405,966...139,406,844 JBrowse link
G AABR07065699.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,560,028...139,560,489 JBrowse link
G AABR07065699.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,531,330...139,531,729 JBrowse link
G AABR07065699.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,551,751...139,552,182 JBrowse link
G AABR07065699.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,486,775...139,487,576 JBrowse link
G AABR07065699.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,523,337...139,524,186 JBrowse link
G AABR07065705.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,636,594...139,637,354 JBrowse link
G AABR07065705.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,746,888...139,747,737 JBrowse link
G AABR07065705.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,718,892...139,719,323 JBrowse link
G AABR07065705.6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,654,077...139,654,508 JBrowse link
G AABR07065714.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,783,839...139,911,839 JBrowse link
G AABR07065737.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,972,140...139,973,811 JBrowse link
G AABR07065740.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:139,997,178...139,997,537 JBrowse link
G AABR07065750.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,215,386...140,216,072 JBrowse link
G AABR07065750.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,101,861...140,102,325 JBrowse link
G AABR07065753.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,266,079...140,266,507 JBrowse link
G AABR07065768.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,485,452...140,485,913 JBrowse link
G AABR07065768.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,416,650...140,418,831 JBrowse link
G AABR07065768.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,406,876...140,407,307 JBrowse link
G AABR07065772.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,571,595...140,572,023 JBrowse link
G AABR07065772.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,641,757...140,642,221 JBrowse link
G AABR07065772.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,585,071...140,587,251 JBrowse link
G AABR07065773.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,714,676...140,715,174 JBrowse link
G AABR07065774.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,805,046...140,805,551 JBrowse link
G AABR07065776.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,833,610...140,834,159 JBrowse link
G AABR07065776.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,879,774...140,880,070 JBrowse link
G AABR07065778.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:140,979,710...140,980,193 JBrowse link
G AABR07065778.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,008,140...141,008,427 JBrowse link
G AABR07065778.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,062,124...141,062,581 JBrowse link
G AABR07065781.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,146,719...141,147,264 JBrowse link
G AABR07065782.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,198,248...141,198,565 JBrowse link
G AABR07065789.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,290,922...141,291,347 JBrowse link
G AABR07065789.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,364,359...141,365,198 JBrowse link
G AABR07065789.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,320,809...141,321,108 JBrowse link
G AABR07065790.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,383,872...141,384,305 JBrowse link
G AABR07065792.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,487,555...141,488,290 JBrowse link
G AABR07065792.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,472,292...141,472,746 JBrowse link
G AABR07065798.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,715,354...141,715,846 JBrowse link
G AABR07065802.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,831,336...141,831,632 JBrowse link
G AABR07065804.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,866,364...141,866,756 JBrowse link
G AABR07065808.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:141,957,036...141,957,537 JBrowse link
G AABR07065811.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,059,736...142,060,032 JBrowse link
G AABR07065812.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,251,680...142,251,976 JBrowse link
G AABR07065812.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,177,345...142,178,771 JBrowse link
G AABR07065813.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,299,568...142,299,996 JBrowse link
G AABR07065814.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,418,316...142,418,800 JBrowse link
G AABR07065814.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,352,806...142,353,308 JBrowse link
G AABR07065814.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,371,639...142,372,031 JBrowse link
G AABR07065814.4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,533,676...142,534,112 JBrowse link
G AABR07065814.5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,479,319...142,479,939 JBrowse link
G AABR07065814.7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,385,310...142,385,773 JBrowse link
G AABR07065815.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,584,754...142,585,188 JBrowse link
G AABR07065815.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,635,329...142,676,432 JBrowse link
G AABR07065823.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,992,767...142,993,147 JBrowse link
G AABR07065823.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,932,678...142,933,110 JBrowse link
G AABR07065823.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,903,147...142,903,440 JBrowse link
G AABR07065827.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,065,206...143,065,639 JBrowse link
G AABR07065834.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,130,685...143,131,118 JBrowse link
G AABR07065837.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,194,515...143,195,445 JBrowse link
G AABR07065839.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,206,479...143,206,772 JBrowse link
G AABR07065844.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,228,835...143,230,111 JBrowse link
G AABR07065877.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,536,737...143,537,030 JBrowse link
G AABR07065883.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,590,014...143,590,448 JBrowse link
G AABR07065886.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,701,600...143,702,033 JBrowse link
G AABR07065889.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:143,768,677...143,768,985 JBrowse link
G AC109737.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:70,828,894...70,830,344 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:4939876|PMID:21245295) RGD PMID:21245295 MGI:4939876 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO (MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749 		JBrowse link
G Clec4m C-type lectin domain family 4 member M acts_upstream_of_or_within ISO (MGI:3027358|PMID:14707091) RGD PMID:14707091 MGI:3027358 NCBI chr12:2,817,633...2,826,303
Ensembl chr12:2,816,065...2,826,378 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO
IBA		 (PMID:11567029)
PMID:21873635		 RGD PMID:11567029, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334 		JBrowse link
G Colec12 collectin sub-family member 12 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11564734)		 UniProt
RGD		 PMID:11564734 GO_REF:0000024 NCBI chr18:867,048...1,054,047
Ensembl chr18:867,048...1,052,606 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia acts_upstream_of_or_within ISO MGI:2664927|MGI:2679238 (MGI:2664488|PMID:11911824), (MGI:2679188|PMID:9551950), (MGI:2679189|PMID:11911823) RGD PMID:9551950 PMID:11911823 PMID:11911824 MGI:2664488 MGI:2679188 MGI:2679189 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041 		JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa acts_upstream_of_or_within ISO MGI:1861924 (MGI:2683747|PMID:9834201), (MGI:2683749|PMID:9743367), (MGI:82508|PMID:8769481) RGD PMID:8769481 PMID:9743367 PMID:9834201 MGI:2683747 MGI:2683749 MGI:82508 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036 		JBrowse link
G IgG-2a gamma-2a immunoglobulin heavy chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igh-6 immunoglobulin heavy chain 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,092,131...138,093,643 JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:2664488|PMID:11911824), (MGI:2679188|PMID:9551950), (MGI:2679189|PMID:11911823), (MGI:2683747|PMID:9834201), (MGI:2683749|PMID:9743367), (MGI:82508|PMID:8769481)		 RGD PMID:8769481 PMID:9551950 PMID:9743367 PMID:9834201 PMID:11911823 PMID:11911824, PMID:21873635 MGI:2664488 MGI:2679188 MGI:2679189 MGI:2683747 MGI:2683749 MGI:82508, RGD:13792537 NCBI chr 6:139,140,572...139,784,388
Ensembl chr 6:139,140,679...139,142,218 		JBrowse link
G Ighm immunoglobulin heavy constant mu involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Ighv1-58 immunoglobulin heavy variable 1-58 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:142,791,766...142,880,382 JBrowse link
G Igkc immunoglobulin kappa constant involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Igll1 immunoglobulin lambda-like polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:88,388,378...88,391,524
Ensembl chr11:88,388,378...88,391,370 		JBrowse link
G LOC100359530 rCG21044-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,930,894...138,931,525 JBrowse link
G LOC100359684 mCG114411-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,406,777...140,407,357 JBrowse link
G LOC100360344 hypothetical protein LOC100360344 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,292,970...139,293,665 JBrowse link
G LOC100360436 hypothetical LOC100360436 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,345,463...139,346,007 JBrowse link
G LOC100360628 rCG58847-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,660,026...139,660,764 JBrowse link
G LOC100360761 rCG64219-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,979,689...140,980,243 JBrowse link
G LOC100361105 Igh protein-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:141,146,691...141,147,268 JBrowse link
G LOC100361706 lambda-chain C1-region-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,094,822...86,096,399
Ensembl chr11:86,094,567...86,096,397 		JBrowse link
G LOC100361945 mCG129376-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:139,486,687...139,487,301 JBrowse link
G LOC100365649 hypothetical LOC100365649 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,743,974...138,744,542 JBrowse link
G LOC362795 immunoglobulin G heavy chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:138,192,156...138,201,560 JBrowse link
G LOC691815 Ig heavy chain V region PJ14-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:140,714,720...140,715,176 JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:2681272|PMID:12000961)		 Ensembl
RGD		 PMID:12000961 GO_REF:0000107 MGI:2681272 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894 		JBrowse link
G RGD1564318 similar to immunoglobulin light chain variable region involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Scarb1 scavenger receptor class B, member 1 IMP RGD PMID:12016218 RGD:1304245 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455 		JBrowse link
G Sirpa signal-regulatory protein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:2680858|PMID:14634079)		 Ensembl
RGD		 PMID:14634079 GO_REF:0000107 MGI:2680858 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477 		JBrowse link
G Tub TUB bipartite transcription factor acts_upstream_of_or_within ISO MGI:1861349 (MGI:4441109|PMID:19837063), (MGI:4867371|PMID:20978472) RGD PMID:19837063 PMID:20978472 MGI:4441109 MGI:4867371 NCBI chr 1:173,550,929...173,629,550
Ensembl chr 1:173,607,101...173,625,550 		JBrowse link
G Tulp1 TUB like protein 1 acts_upstream_of_or_within ISO MGI:1859921 (MGI:4441109|PMID:19837063), (MGI:4867371|PMID:20978472) RGD PMID:19837063 PMID:20978472 MGI:4441109 MGI:4867371 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575 		JBrowse link
opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd47 Cd47 molecule acts_upstream_of_or_within ISO (MGI:2680858|PMID:14634079) RGD PMID:14634079 MGI:2680858 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175 		JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (MGI:3037598|PMID:14726497) RGD PMID:14726497 MGI:3037598 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653 		JBrowse link
G Sftpa1 surfactant protein A1 involved_in ISO (PMID:21123169) RGD PMID:21123169 NCBI chr16:18,716,019...18,719,404
Ensembl chr16:18,716,019...18,719,403 		JBrowse link
G Sftpd surfactant protein D IDA RGD PMID:19017984 RGD:4143523 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174 		JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:2686801 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599 		JBrowse link
positive regulation of opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo18a myosin XVIIIa involved_in ISO
IEA		 (PMID:21123169)
GO_REF:0000107
(MGI:5810257|PMID:21123169)		 RGD
Ensembl		 PMID:21123169 GO_REF:0000107 MGI:5810257 NCBI chr10:64,979,770...65,080,535
Ensembl chr10:64,979,770...65,080,535 		JBrowse link
G Pla2g5 phospholipase A2, group V involved_in ISS
ISO		 GO_REF:0000024
(MGI:3841317|PMID:19342668)		 UniProt
RGD		 PMID:19342668 GO_REF:0000024 MGI:3841317 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903 		JBrowse link
recognition of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A involved_in ISO (PMID:15804047) RGD PMID:15804047 NCBI chr 3:2,850,006...2,853,230
Ensembl chr 3:2,849,984...2,853,272 		JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:15804047) RGD PMID:15804047 NCBI chr 3:6,617,816...6,626,193
Ensembl chr 3:6,617,751...6,626,284 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within ISO MGI:2686850 (MGI:1855743|PMID:10811223), (MGI:2682078|PMID:14645847) RGD PMID:10811223 PMID:14645847 MGI:1855743 MGI:2682078 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803 		JBrowse link
G Megf10 multiple EGF-like domains 10 acts_upstream_of_or_within ISO (MGI:4414741|PMID:19915564) RGD PMID:19915564 MGI:4414741 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238 		JBrowse link
G Pear1 platelet endothelial aggregation receptor 1 acts_upstream_of_or_within ISO (MGI:4414741|PMID:19915564) RGD PMID:19915564 MGI:4414741 NCBI chr 2:187,114,219...187,134,209
Ensembl chr 2:187,114,217...187,133,993 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IDA
ISS
IBA		 (PMID:9211901)
PMID:12016218
GO_REF:0000024
PMID:21873635		 RGD
BHF-UCL		 PMID:9211901, PMID:12016218, PMID:21873635 GO_REF:0000024, RGD:1304245, RGD:13792537 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455 		JBrowse link
regulation of opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4bpa complement component 4 binding protein, alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:22333221)		 Ensembl
RGD		 PMID:22333221 GO_REF:0000107 NCBI chr13:47,342,090...47,377,580
Ensembl chr13:47,342,079...47,377,703 		JBrowse link
G C4bpb complement component 4 binding protein, beta involved_in ISO
IEA		 (PMID:22333221)
GO_REF:0000107		 RGD
Ensembl		 PMID:22333221 GO_REF:0000107 NCBI chr13:47,387,173...47,398,115
Ensembl chr13:47,387,173...47,397,890 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    cellular process 18484
      cell recognition 269
        phagocytosis, recognition 143
          opsonization + 9
          recognition of apoptotic cell 6
Path 2
Term Annotations click to browse term
  biological_process 19638
    localization 6422
      establishment of localization 4854
        transport 4692
          vesicle-mediated transport 1667
            endocytosis 694
              phagocytosis, recognition 143
                opsonization + 9
                recognition of apoptotic cell 6
paths to the root