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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle docking involved in exocytosis
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Accession:GO:0006904 term browser browse the term
Definition:The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.
Synonyms:related_synonym: vesicle docking during exocytosis



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vesicle docking involved in exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in IEA
ISO
GO_REF:0000107
(MGI:5640937|PMID:24885604)
Ensembl
RGD
PMID:24885604 GO_REF:0000107 MGI:5640937 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Cplx2 complexin 2 involved_in TAS PMID:7553862 PINC PMID:7553862 RGD:70701 NCBI chr17:10,219,577...10,292,835
Ensembl chr17:10,222,347...10,293,855
JBrowse link
G Exoc2 exocyst complex component 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:12459492)
Ensembl
RGD
PMID:12459492 GO_REF:0000107 NCBI chr17:33,506,289...33,698,246
Ensembl chr17:33,506,338...33,693,289
JBrowse link
G Exoc4 exocyst complex component 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Gnao1 G protein subunit alpha o1 involved_in
acts_upstream_of_negative_effect
IEA
ISO
GO_REF:0000107
MGI:4941848 (PMID:20622165)
Ensembl
RGD
PMID:20622165 GO_REF:0000107 NCBI chr19:11,034,874...11,192,531
Ensembl chr19:11,035,956...11,192,493
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 involved_in IDA PMID:20484665 UniProt PMID:20484665 RGD:10047179 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
JBrowse link
G Nrxn1 neurexin 1 acts_upstream_of_or_within IMP PMID:22235116 MGI PMID:22235116 RGD:8553305 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Plek pleckstrin involved_in ISO
IEA
(MGI:3844782|PMID:19190246)
GO_REF:0000107
RGD
Ensembl
PMID:19190246 GO_REF:0000107 MGI:3844782 NCBI chr14:91,397,015...91,429,693
Ensembl chr14:91,397,019...91,454,131
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO
IEA
(PMID:17574030)
GO_REF:0000107
RGD
Ensembl
PMID:17574030 GO_REF:0000107 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Stx1b syntaxin 1B involved_in ISS
ISO
GO_REF:0000024
(MGI:3803800|PMID:18703708)
ParkinsonsUK-UCL
RGD
PMID:18703708 GO_REF:0000024 MGI:3803800 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:2183278 (PMID:11545717)
GO_REF:0000033
(MGI:3803800|PMID:18703708)
ParkinsonsUK-UCL
RGD
GO_Central
PMID:11545717 PMID:18703708 GO_REF:0000024 GO_REF:0000033 MGI:3803800 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Stxbp2 syntaxin binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:1,689,364...1,701,145
Ensembl chr12:1,689,410...1,700,458
JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in TAS
IBA
GO_REF:0000033 GO_Central
RGD
PMID:15563604 GO_REF:0000033, RGD:1302922 NCBI chr 2:196,442,738...196,485,733
Ensembl chr 2:196,442,634...196,485,671
JBrowse link
G Sytl2 synaptotagmin-like 2 involved_in ISO (PMID:18812475) RGD PMID:18812475 NCBI chr 1:144,272,870...144,379,310
Ensembl chr 1:144,273,360...144,379,222
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:44,684,129...44,698,568
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964
JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in ISO
ISS
(PMID:9211930) RGD PMID:9211930 PMID:9211930 RGD:8553660 NCBI chr14:80,832,187...80,843,394
Ensembl chr14:80,832,187...80,843,385
JBrowse link
dense core granule docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13a unc-13 homolog A NOT|involved_in ISO UniProtKB:Q9Z1N9 (MGI:5819330|PMID:26575293) RGD PMID:26575293 MGI:5819330 NCBI chr16:18,333,910...18,381,813
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B NOT|involved_in ISO UniProtKB:Q4KUS2 (MGI:5819330|PMID:26575293) RGD PMID:26575293 MGI:5819330 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
regulation of exocyst assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncam1 neural cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:21389209) RGD PMID:21389209 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Ralb RAS like proto-oncogene B involved_in IDA PMID:16382162 UniProt PMID:16382162 RGD:8554641 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in ISO (PMID:17660813) RGD PMID:17660813 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Septin5 septin 5 involved_in ISO (PMID:20624595) RGD PMID:20624595 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbp2 C-terminal binding protein 2 involved_in ISO (PMID:26929012) RGD PMID:26929012 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:29439199)
Ensembl
RGD
PMID:29439199 GO_REF:0000107 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in ISO (PMID:21241895) RGD PMID:21241895 NCBI chr 9:24,696,959...25,196,404
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (PMID:21241895) RGD PMID:21241895 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in TAS PMID:9704016 UniProt PMID:9704016 RGD:70020 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Stx1a syntaxin 1A involved_in IEP PMID:1321498 UniProt PMID:1321498 RGD:8553325 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx1b syntaxin 1B involved_in ISS
ISO
IEA
GO_REF:0000024
UniProtKB:O35526 (MGI:5521403|PMID:24133272), (MGI:5603022|PMID:24587181)
GO_REF:0000107
ParkinsonsUK-UCL
RGD
Ensembl
PMID:24133272 PMID:24587181 GO_REF:0000024 GO_REF:0000107 MGI:5521403 MGI:5603022 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stx3 syntaxin 3 TAS RGD PMID:7690687 RGD:68313 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 IDA RGD PMID:7690687 RGD:68313 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO MGI:4841821 (PMID:23791195) RGD PMID:23791195 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869
JBrowse link
G Tprg1l tumor protein p63 regulated 1-like involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:6385150 (PMID:33431696)
Ensembl
RGD
PMID:33431696 GO_REF:0000107 NCBI chr 5:164,722,151...164,725,358
Ensembl chr 5:164,710,285...164,725,425
JBrowse link
G Unc13a unc-13 homolog A involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1342278 (PMID:19558619)
GO_Central
RGD
PMID:19558619 GO_REF:0000033 NCBI chr16:18,333,910...18,381,813
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3051532 (PMID:19558619)
GO_Central
RGD
PMID:19558619 GO_REF:0000033 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in ISO (PMID:25374362) RGD PMID:25374362 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    cellular process 18312
      exocytic process 99
        vesicle docking involved in exocytosis 35
          dense core granule docking 2
          exocyst assembly + 2
          exocytic insertion of neurotransmitter receptor to plasma membrane 0
          synaptic vesicle docking + 17
Path 2
Term Annotations click to browse term
  biological_process 19872
    localization 5633
      establishment of localization 4939
        transport 4625
          export from cell 1093
            secretion by cell 1008
              exocytosis 406
                exocytic process 99
                  vesicle docking involved in exocytosis 35
                    dense core granule docking 2
                    exocyst assembly + 2
                    exocytic insertion of neurotransmitter receptor to plasma membrane 0
                    synaptic vesicle docking + 17
paths to the root