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ONTOLOGY REPORT - ANNOTATIONS

Term:endocytosis
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Accession:GO:0006897 term browser browse the term
Definition:A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a part of the plasma membrane to form a new membrane-bounded vesicle.
Synonyms:exact_synonym: endocytic import into cell;   vesicle endocytosis
 narrow_synonym: plasma membrane invagination
 related_synonym: nonselective vesicle endocytosis
 alt_id: GO:0016193;   GO:0016196;   GO:0098701
 xref: Wikipedia:Endocytosis

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endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936888:689,673...735,119
Ensembl chrNW_004936888:689,727...733,541 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:5,023,896...5,050,822 JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936785:503,615...525,361
Ensembl chrNW_004936785:508,848...525,391 		JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16025111) Ensembl
MGI		 PMID:16025111 GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Arr3 arrestin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15218143) Ensembl
MGI		 PMID:15218143 GO_REF:0000107 NCBI chrNW_004936762:1,194,251...1,207,914
Ensembl chrNW_004936762:1,194,166...1,208,844 		JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:12519791 RGD:1304268 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:12600992 RGD:1304363 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Atp6v1h ATPase H+ transporting V1 subunit H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:647,171...750,369
Ensembl chrNW_004936496:646,760...750,461 		JBrowse link
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:3,341,207...3,428,948
Ensembl chrNW_004936514:3,341,426...3,424,637 		JBrowse link
G Atp9b ATPase phospholipid transporting 9B (putative) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936616:604,132...846,645
Ensembl chrNW_004936616:603,588...846,640 		JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936611:2,074,655...2,101,846
Ensembl chrNW_004936611:2,078,716...2,101,881 		JBrowse link
G Cav3 caveolin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14600260) Ensembl
MGI		 PMID:14600260 GO_REF:0000107 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161 		JBrowse link
G Cdc42 cell division cycle 42 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24792215) TreeGrafter
MGI		 PMID:24792215 GO_REF:0000118 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16025111) Ensembl
MGI		 PMID:16025111 GO_REF:0000107 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246 		JBrowse link
G Clcn5 chloride voltage-gated channel 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12815097) Ensembl
MGI		 PMID:12815097 GO_REF:0000107 NCBI chrNW_004936721:1,552,312...1,602,360
Ensembl chrNW_004936721:1,445,779...1,596,814 		JBrowse link
G Clint1 clathrin interactor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936515:5,391,139...5,419,919
Ensembl chrNW_004936515:5,391,262...5,418,546 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24792215) Ensembl
MGI		 PMID:24792215 GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Clta clathrin light chain A ISO RGD PMID:14985443 RGD:2301373 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Creg1 cellular repressor of E1A stimulated genes 1 acts_upstream_of_or_within ISO (PMID:33966596) MGI PMID:33966596 NCBI chrNW_004936481:18,523,022...18,531,227 JBrowse link
G Csnk1d casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,720,887...5,743,206
Ensembl chrNW_004936594:5,724,406...5,743,180 		JBrowse link
G Csnk1g1 casein kinase 1 gamma 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:24,642,337...24,795,633
Ensembl chrNW_004936471:24,645,762...24,795,414 		JBrowse link
G Csnk1g2 casein kinase 1 gamma 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:1,140,332...1,148,265
Ensembl chrNW_004936588:1,140,619...1,147,282 		JBrowse link
G Csnk1g3 casein kinase 1 gamma 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936575:3,858,996...3,965,758
Ensembl chrNW_004936575:3,878,604...3,965,758 		JBrowse link
G Dennd1a DENN domain containing 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:11,815,040...12,332,603
Ensembl chrNW_004936487:11,812,658...12,332,673 		JBrowse link
G Dennd1b DENN domain containing 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936567:6,131,433...6,353,003
Ensembl chrNW_004936567:6,134,179...6,348,086 		JBrowse link
G Dnm1 dynamin 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm2 dynamin 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Dnm3 dynamin 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Dpysl2 dihydropyrimidinase like 2 involved_in ISO (PMID:20801876) UniProt PMID:20801876 NCBI chrNW_004936757:311,317...422,870
Ensembl chrNW_004936757:309,022...422,955 		JBrowse link
G Eea1 early endosome antigen 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936507:9,331,572...9,465,708
Ensembl chrNW_004936507:9,331,455...9,424,835 		JBrowse link
G Egr3 early growth response 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936555:6,347,446...6,393,784
Ensembl chrNW_004936555:6,356,691...6,393,825
Ensembl chrNW_004936555:6,356,691...6,393,825 		JBrowse link
G Ehd1 EH domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15247266) Ensembl
MGI
TreeGrafter		 PMID:15247266 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:4,451,207...4,473,078
Ensembl chrNW_004936599:4,450,188...4,473,738 		JBrowse link
G Ehd2 EH domain containing 2 acts_upstream_of_or_within ISO (PMID:14676205), (PMID:15247266) MGI PMID:14676205 PMID:15247266 NCBI chrNW_004936664:1,316,621...1,331,678 JBrowse link
G Ehd3 EH domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:1,864,836...1,896,079
Ensembl chrNW_004936493:1,864,755...1,896,097 		JBrowse link
G Ehd4 EH domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:5,205,185...5,294,507
Ensembl chrNW_004936471:5,205,183...5,294,557 		JBrowse link
G Enthd1 ENTH domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:1,832,241...1,948,704
Ensembl chrNW_004936492:1,832,241...1,948,562 		JBrowse link
G Epn1 epsin 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:12353027 GO_REF:0000118 RGD:632726 NCBI chrNW_004936981:194,176...213,021
Ensembl chrNW_004936981:194,157...213,066 		JBrowse link
G Epn2 epsin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936881:417,348...504,650
Ensembl chrNW_004936881:419,682...504,650 		JBrowse link
G Epn3 epsin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:11,174,552...11,184,516
Ensembl chrNW_004936490:11,174,276...11,184,517 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:4,142,951...4,241,719
Ensembl chrNW_004936596:4,142,895...4,247,976 		JBrowse link
G Fnbp1 formin binding protein 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936487:17,078,653...17,142,293
Ensembl chrNW_004936487:17,085,443...17,142,296 		JBrowse link
G Fnbp1l formin binding protein 1 like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936537:5,671,517...5,789,480
Ensembl chrNW_004936537:5,671,331...5,790,054 		JBrowse link
G Gapvd1 GTPase activating protein and VPS9 domains 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936487:13,393,800...13,454,007
Ensembl chrNW_004936487:13,399,769...13,456,252 		JBrowse link
G Ghr growth hormone receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936518:235,996...380,225
Ensembl chrNW_004936518:235,990...380,272 		JBrowse link
G Heatr5a HEAT repeat containing 5A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936494:5,902,543...6,024,106
Ensembl chrNW_004936494:5,903,892...6,008,582 		JBrowse link
G Heatr5b HEAT repeat containing 5B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936663:1,177,283...1,245,840
Ensembl chrNW_004936663:1,178,221...1,258,280 		JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:2,496,301...2,569,019
Ensembl chrNW_004936543:2,522,154...2,565,376 		JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936558:1,778,862...1,804,071
Ensembl chrNW_004936558:1,778,888...1,791,610 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12446704) Ensembl
MGI		 PMID:12446704 GO_REF:0000107 NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,524,128...1,539,680
Ensembl chrNW_004936498:1,524,128...1,540,578 		JBrowse link
G Itsn1 intersectin 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936500:8,490,514...8,678,127
Ensembl chrNW_004936500:8,468,940...8,612,942 		JBrowse link
G Itsn2 intersectin 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936493:7,716,424...7,842,818
Ensembl chrNW_004936493:7,738,630...7,842,814 		JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:21466805) MGI PMID:21466805 NCBI chrNW_004936514:10,735,247...10,787,682
Ensembl chrNW_004936514:10,735,809...10,787,678 		JBrowse link
G Kcnq3 potassium voltage-gated channel subfamily Q member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21466805) Ensembl
MGI		 PMID:21466805 GO_REF:0000107 NCBI chrNW_004936470:16,712,508...17,009,648
Ensembl chrNW_004936470:16,712,703...17,009,397 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO
IEA		 RGD
UniProt		 PMID:17256088 GO_REF:0000043 RGD:2324632 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Lmbr1l limb development membrane protein 1 like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936512:6,892,798...6,910,576
Ensembl chrNW_004936512:6,892,801...6,910,576 		JBrowse link
G LOC101954375 AP-3 complex subunit mu-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936613:1,675,209...1,677,312 JBrowse link
G LOC101954473 equatorin acts_upstream_of_or_within ISO (PMID:19285662) MGI PMID:19285662 NCBI chrNW_004936611:2,370,269...2,397,903 JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101960713 CD302 antigen involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936469:18,839,750...18,963,570
Ensembl chrNW_004936469:18,935,870...18,963,872
Ensembl chrNW_004936469:18,935,870...18,963,872 		JBrowse link
G LOC101966144 cell division control protein 42 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:66,778...89,260 JBrowse link
G LOC101967743 casein kinase I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:2,904,622...2,925,904
Ensembl chrNW_004936492:2,907,015...2,928,418 		JBrowse link
G LOC101969002 epidermal growth factor receptor substrate 15-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937146:133,312...136,047 JBrowse link
G LOC101971017 sorting nexin-18-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004939639:383...2,393 JBrowse link
G LOC101972188 nucleoside diphosphate kinase A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109 		JBrowse link
G LOC120883745 prolow-density lipoprotein receptor-related protein 1-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117
G Lrp1 LDL receptor related protein 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Lrp1b LDL receptor related protein 1B involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936469:35,000,773...36,160,216
Ensembl chrNW_004936469:35,203,594...36,159,283 		JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISO
IEA		 RGD
UniProt		 PMID:15670845 GO_REF:0000043 GO_REF:0000117 RGD:1641835 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936562:2,211,519...2,262,899
Ensembl chrNW_004936562:2,211,514...2,263,937 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936522:7,740,887...7,820,488
Ensembl chrNW_004936522:7,740,887...7,816,297 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Marco macrophage receptor with collagenous structure acts_upstream_of_or_within ISO (PMID:19201851) MGI PMID:19201851 NCBI chrNW_004936469:51,323,746...51,366,551 JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637 		JBrowse link
G Micall1 MICAL like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,200,754...3,227,983
Ensembl chrNW_004936492:3,204,969...3,226,559 		JBrowse link
G Mrc1 mannose receptor C-type 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936520:9,463,007...9,547,321
Ensembl chrNW_004936520:9,463,007...9,547,257 		JBrowse link
G Mrc2 mannose receptor C type 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936541:3,461,985...3,487,536
Ensembl chrNW_004936541:3,421,257...3,487,562 		JBrowse link
G Myo1e myosin IE involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:20,244,424...20,435,604
Ensembl chrNW_004936471:20,244,397...20,435,648 		JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15657400) Ensembl
MGI
TreeGrafter		 PMID:15657400 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936788:1,125,332...1,264,372
Ensembl chrNW_004936788:1,174,544...1,262,746 		JBrowse link
G Nckipsd NCK interacting protein with SH3 domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:474,978...485,333
Ensembl chrNW_004936529:471,913...485,389 		JBrowse link
G Necap1 NECAP endocytosis associated 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936892:372,743...385,127
Ensembl chrNW_004936892:372,284...385,202 		JBrowse link
G Necap2 NECAP endocytosis associated 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:3,892,608...3,906,548
Ensembl chrNW_004936474:3,892,608...3,906,558 		JBrowse link
G Nostrin nitric oxide synthase trafficking involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936469:10,659,533...10,716,301
Ensembl chrNW_004936469:10,659,510...10,716,392 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15078881) Ensembl
MGI		 PMID:15078881 GO_REF:0000107 NCBI chrNW_004936550:2,983,172...3,032,222
Ensembl chrNW_004936550:2,980,442...3,032,229 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,845,372...1,964,908
Ensembl chrNW_004936528:1,869,527...1,964,183 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422 		JBrowse link
G Pla2r1 phospholipase A2 receptor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936469:18,679,840...18,789,655
Ensembl chrNW_004936469:18,679,914...18,789,369 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family NOT|involved_in ISO (MGI:5486575|PMID:10942597) UniProt PMID:10942597 MGI:5486575 NCBI chrNW_004936588:5,198,659...5,210,430
Ensembl chrNW_004936588:5,198,394...5,214,603 		JBrowse link
G Rab17 RAB17, member RAS oncogene family NOT|involved_in ISO (MGI:1266871|PMID:9624171) UniProt PMID:9624171 MGI:1266871 NCBI chrNW_004936525:748,851...765,636
Ensembl chrNW_004936525:748,600...765,642 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:21303926) UniProt PMID:21303926 RGD:8554665 NCBI chrNW_004936491:9,858,645...9,891,674 JBrowse link
G Rab22a RAB22A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:907,359...963,490
Ensembl chrNW_004936530:907,400...963,488 		JBrowse link
G Rab34 RAB34, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:12446704) MGI PMID:12446704 NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12446704), (PMID:8197185) RGD
MGI
Ensembl		 PMID:8197185 PMID:12446704 PMID:16154939 GO_REF:0000107 RGD:2306449 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Rabep1 rabaptin, RAB GTPase binding effector protein 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936677:2,417,676...2,481,587
Ensembl chrNW_004936677:2,417,679...2,512,868 		JBrowse link
G Rabep2 rabaptin, RAB GTPase binding effector protein 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936501:11,807,369...11,818,350
Ensembl chrNW_004936501:11,806,836...11,817,838 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:12446704) MGI PMID:12446704 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Ralbp1 ralA binding protein 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:19823667 GO_REF:0000118 RGD:2324918 NCBI chrNW_004936626:1,832,703...1,851,486
Ensembl chrNW_004936626:1,832,584...1,851,467 		JBrowse link
G Rhoj ras homolog family member J involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936495:7,094,522...7,174,371
Ensembl chrNW_004936495:7,094,513...7,174,371 		JBrowse link
G Rhoq ras homolog family member Q involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936508:5,692,482...5,727,608
Ensembl chrNW_004936508:5,692,482...5,727,614 		JBrowse link
G Rhou ras homolog family member U involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:20,406,053...20,413,428
Ensembl chrNW_004936484:20,406,051...20,412,807 		JBrowse link
G Rhov ras homolog family member V involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:4,265,581...4,267,655
Ensembl chrNW_004936471:4,265,567...4,267,694 		JBrowse link
G Rinl Ras and Rab interactor like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21419809) Ensembl
MGI		 PMID:21419809 GO_REF:0000107 NCBI chrNW_004936661:1,821,767...1,824,526
Ensembl chrNW_004936661:1,821,823...1,827,010 		JBrowse link
G Scamp1 secretory carrier membrane protein 1 ISO RGD PMID:10777571 RGD:631946 NCBI chrNW_004936549:6,291,063...6,389,000
Ensembl chrNW_004936549:6,291,151...6,391,952 		JBrowse link
G Scara5 scavenger receptor class A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:763,467...868,021
Ensembl chrNW_004936675:765,378...863,843 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936483:18,051,023...18,176,514
Ensembl chrNW_004936483:18,050,899...18,176,519 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477453) Ensembl
MGI		 PMID:18477453 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Snx10 sorting nexin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25811986) Ensembl
MGI		 PMID:25811986 GO_REF:0000107 NCBI chrNW_004936478:3,048,801...3,113,610
Ensembl chrNW_004936478:3,048,691...3,114,876 		JBrowse link
G Snx18 sorting nexin 18 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936480:13,108,510...13,137,550 JBrowse link
G Snx33 sorting nexin 33 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:34,414,086...34,425,236
Ensembl chrNW_004936471:34,414,474...34,428,784 		JBrowse link
G Snx9 sorting nexin 9 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936489:9,736,255...9,804,841
Ensembl chrNW_004936489:9,736,242...9,804,874 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936542:6,192,407...6,352,835
Ensembl chrNW_004936542:6,192,407...6,352,424 		JBrowse link
G Sort1 sortilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24163244) Ensembl
MGI
TreeGrafter		 PMID:24163244 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936704:832,651...901,658
Ensembl chrNW_004936704:837,057...901,392 		JBrowse link
G Stab2 stabilin 2 involved_in ISO PMID:12181351 UniProt PMID:12181351 RGD:625583 NCBI chrNW_004936492:10,678,074...10,817,870
Ensembl chrNW_004936492:10,678,115...10,833,963 		JBrowse link
G Steap2 STEAP2 metalloreductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:3,784,628...3,806,787
Ensembl chrNW_004936621:3,779,745...3,806,851 		JBrowse link
G Ston1 stonin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26437238) Ensembl
MGI
UniProt
InterPro		 PMID:26437238 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936508:4,068,102...4,116,166
Ensembl chrNW_004936508:4,065,711...4,116,652 		JBrowse link
G Ston2 stonin 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936488:9,689,595...9,816,672
Ensembl chrNW_004936488:9,682,823...9,816,703 		JBrowse link
G Syp synaptophysin involved_in ISO PMID:17005904 UniProt PMID:17005904 RGD:8554727 NCBI chrNW_004936721:1,062,206...1,075,935
Ensembl chrNW_004936721:1,062,217...1,075,988 		JBrowse link
G Tbc1d2b TBC1 domain family member 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:36,905,690...36,976,916
Ensembl chrNW_004936471:36,905,684...36,981,220 		JBrowse link
G Tfrc transferrin receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543 		JBrowse link
G Trip10 thyroid hormone receptor interactor 10 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936588:4,035,370...4,044,751
Ensembl chrNW_004936588:4,037,511...4,044,486 		JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936538:4,772,236...4,778,149
Ensembl chrNW_004936538:4,772,283...4,778,137 		JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936487:17,030,397...17,069,165
Ensembl chrNW_004936487:17,044,073...17,069,104 		JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936571:4,537,461...4,600,238
Ensembl chrNW_004936571:4,537,405...4,588,570 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502 		JBrowse link
G Wasf2 WASP family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12446704) Ensembl
MGI		 PMID:12446704 GO_REF:0000107 NCBI chrNW_004936474:11,711,582...11,736,154
Ensembl chrNW_004936474:11,711,582...11,735,897 		JBrowse link
apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,232,183...3,241,307
Ensembl chrNW_004936677:3,232,183...3,241,253 		JBrowse link
G Axl AXL receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17442946)
(PMID:23878224)
(PMID:18804096)
(PMID:18159085)		 Ensembl
MGI		 PMID:17442946 PMID:18159085 PMID:18804096 PMID:23878224 GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15647754) Ensembl
MGI		 PMID:15647754 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Gas6 growth arrest specific 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18159085) Ensembl
MGI		 PMID:18159085 GO_REF:0000107 NCBI chrNW_004936472:27,116...57,158
Ensembl chrNW_004936472:32,123...54,028 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:18768881) UniProt PMID:18768881 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Itgav integrin subunit alpha V involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15647754) Ensembl
MGI		 PMID:15647754 GO_REF:0000107 NCBI chrNW_004936506:10,750,116...10,839,018
Ensembl chrNW_004936506:10,750,101...10,839,303 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:2,822,789...2,871,069
Ensembl chrNW_004936541:2,815,738...2,871,035 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:14715629)
(PMID:15345036)
(PMID:15647754)		 Ensembl
MGI		 PMID:14715629 PMID:15345036 PMID:15647754 GO_REF:0000107 NCBI chrNW_004936594:1,760,924...1,771,022
Ensembl chrNW_004936594:1,760,853...1,770,765 		JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230 		JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within ISO (PMID:15647754) MGI PMID:15647754 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Marco macrophage receptor with collagenous structure acts_upstream_of_or_within ISO (PMID:19201851) MGI PMID:19201851 NCBI chrNW_004936469:51,323,746...51,366,551 JBrowse link
G Megf10 multiple EGF like domains 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936504:634,167...753,438
Ensembl chrNW_004936504:586,190...756,255 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29440417)
(PMID:18159085)
(PMID:23878224)
(PMID:17442946)		 Ensembl
MGI		 PMID:17442946 PMID:18159085 PMID:23878224 PMID:29440417 GO_REF:0000107 NCBI chrNW_004936783:607,425...704,879
Ensembl chrNW_004936783:607,382...704,889 		JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:14,868,171...14,880,552
Ensembl chrNW_004936483:14,865,033...14,880,794 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669 		JBrowse link
G Rara retinoic acid receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Tgm2 transglutaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,178,244...3,207,551
Ensembl chrNW_004936561:3,178,293...3,207,561 		JBrowse link
G Timd4 T cell immunoglobulin and mucin domain containing 4 acts_upstream_of_or_within ISO (PMID:29440417) MGI PMID:29440417 NCBI chrNW_004936515:6,106,991...6,141,027 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218451) Ensembl
MGI		 PMID:24218451 GO_REF:0000107 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17442946)
(PMID:18159085)		 Ensembl
MGI		 PMID:17442946 PMID:18159085 GO_REF:0000107 NCBI chrNW_004936471:4,893,185...4,910,779
Ensembl chrNW_004936471:4,893,078...4,910,859 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (MGI:3531054|PMID:15728241) UniProt PMID:15728241 MGI:3531054 NCBI chrNW_004936570:457,993...460,735
Ensembl chrNW_004936570:458,054...460,579 		JBrowse link
caveolin-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17715130) Ensembl
MGI		 PMID:17715130 GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180 		JBrowse link
G Mlc1 modulator of VRAC current 1 involved_in ISO PMID:19931615 UniProt PMID:19931615 RGD:2326037 NCBI chrNW_004936629:696,592...719,363
Ensembl chrNW_004936629:696,451...719,416 		JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936718:739,133...850,775
Ensembl chrNW_004936718:739,133...801,662 		JBrowse link
clathrin coat assembly involved in endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
clathrin-dependent endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936888:689,673...735,119
Ensembl chrNW_004936888:689,727...733,541 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Canx calnexin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:1,051,853...1,085,658
Ensembl chrNW_004936739:1,051,240...1,086,405 		JBrowse link
G Clta clathrin light chain A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:4,170,425...4,191,951
Ensembl chrNW_004936524:4,169,732...4,191,951 		JBrowse link
G Cltb clathrin light chain B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936597:665,365...689,867
Ensembl chrNW_004936597:662,725...689,873 		JBrowse link
G Cltc clathrin heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO PMID:22658936 UniProt PMID:22658936 RGD:10402035 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427 		JBrowse link
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936692:2,788,477...2,836,094
Ensembl chrNW_004936692:2,741,632...2,834,078 		JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:3,234,603...3,265,484
Ensembl chrNW_004936596:3,252,826...3,265,359 		JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:3,455,172...3,565,507
Ensembl chrNW_004936549:3,455,172...3,565,558 		JBrowse link
G Fchsd2 FCH and double SH3 domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:2,089,069...2,344,007
Ensembl chrNW_004936498:2,086,282...2,344,708 		JBrowse link
G Fnbp1l formin binding protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:5,671,517...5,789,480
Ensembl chrNW_004936537:5,671,331...5,790,054 		JBrowse link
G Gak cyclin G associated kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18434600), (PMID:20160091) Ensembl
MGI		 PMID:18434600 PMID:20160091 GO_REF:0000107 NCBI chrNW_004936477:22,254,109...22,300,827
Ensembl chrNW_004936477:22,253,471...22,300,932 		JBrowse link
G Gpr107 G protein-coupled receptor 107 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24849652) Ensembl
MGI
TreeGrafter		 PMID:24849652 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:17,192,159...17,272,782
Ensembl chrNW_004936487:17,192,155...17,273,166 		JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:9,123,176...9,166,715
Ensembl chrNW_004936486:9,123,119...9,188,117 		JBrowse link
G Lmbrd1 LMBR1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936618:1,694,886...1,792,586
Ensembl chrNW_004936618:1,689,646...1,792,802 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:5573004|PMID:24608321) UniProt PMID:24608321 MGI:5573004 NCBI chrNW_004936479:21,373,917...22,062,498
Ensembl chrNW_004936479:21,373,746...21,920,214 		JBrowse link
G P2rx4 purinergic receptor P2X 4 enables ISO RGD PMID:16282518 RGD:1642691 NCBI chrNW_004936558:3,062,279...3,077,493
Ensembl chrNW_004936558:3,059,886...3,077,451 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,502,854...13,564,886
Ensembl chrNW_004936492:13,501,663...13,564,867 		JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936591:4,815,222...5,015,250
Ensembl chrNW_004936591:4,817,184...5,016,140 		JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:21359217) AgBase PMID:21359217 NCBI chrNW_004936485:14,979,838...14,999,047
Ensembl chrNW_004936485:14,979,819...14,998,004 		JBrowse link
G Slc9b2 solute carrier family 9 member B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:316,070...371,590
Ensembl chrNW_004936520:331,845...371,470 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:14,979,838...14,999,047
Ensembl chrNW_004936485:14,979,819...14,998,004 		JBrowse link
clathrin-dependent extracellular exosome endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 ISO RGD PMID:20124479 RGD:9698434 NCBI chrNW_004936509:10,215,283...10,293,653
Ensembl chrNW_004936509:10,215,283...10,292,252 		JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itsn1 intersectin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936500:8,490,514...8,678,127
Ensembl chrNW_004936500:8,468,940...8,612,942 		JBrowse link
G Reps1 RALBP1 associated Eps domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936560:5,981,037...6,057,059
Ensembl chrNW_004936560:5,981,244...6,056,984 		JBrowse link
G Reps2 RALBP1 associated Eps domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:6,218,035...6,428,776
Ensembl chrNW_004936470:6,218,047...6,423,408 		JBrowse link
endocytic hemoglobin import into cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin ISO RGD PMID:11805171 RGD:2317837 NCBI chrNW_004936520:10,140,784...10,410,082
Ensembl chrNW_004936520:10,140,784...10,409,851 		JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:11805171 RGD:2317837 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
endocytic iron import into cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfr2 transferrin receptor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:667,570...681,872
Ensembl chrNW_004936543:668,157...682,174 		JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jpt2 Jupiter microtubule associated homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:2,265,360...2,283,887
Ensembl chrNW_004936694:2,265,360...2,283,878 		JBrowse link
G Tpcn1 two pore segment channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:3,111,038...3,162,163
Ensembl chrNW_004936668:3,111,002...3,163,396 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:1,301,937...1,343,046
Ensembl chrNW_004936599:1,318,169...1,343,106 		JBrowse link
engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230 		JBrowse link
G Megf10 multiple EGF like domains 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27170117) Ensembl
MGI		 PMID:27170117 GO_REF:0000107 NCBI chrNW_004936504:634,167...753,438
Ensembl chrNW_004936504:586,190...756,255 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Rac2 Rac family small GTPase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:3,726,375...3,737,961
Ensembl chrNW_004936492:3,726,313...3,736,905 		JBrowse link
G Rac3 Rac family small GTPase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,527,788...5,530,694
Ensembl chrNW_004936594:5,528,908...5,531,420 		JBrowse link
G Rhobtb1 Rho related BTB domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936614:2,101,175...2,230,441
Ensembl chrNW_004936614:2,103,101...2,230,444 		JBrowse link
G Rhobtb2 Rho related BTB domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936555:6,664,811...6,684,756
Ensembl chrNW_004936555:6,664,768...6,682,822 		JBrowse link
G Rhog ras homolog family member G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936498:1,077,354...1,088,003
Ensembl chrNW_004936498:1,077,422...1,088,003 		JBrowse link
G Rhoh ras homolog family member H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:7,721,815...7,723,395
Ensembl chrNW_004936482:7,689,371...7,723,321 		JBrowse link
G Rhot1 ras homolog family member T1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:2,658,225...2,725,889
Ensembl chrNW_004936538:2,658,172...2,726,092 		JBrowse link
G Thbs1 thrombospondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,064,466...3,081,125
Ensembl chrNW_004936471:3,064,422...3,081,949 		JBrowse link
G Xkr4 XK related 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936496:1,887,943...2,289,928
Ensembl chrNW_004936496:1,888,068...2,287,963 		JBrowse link
G Xkr5 XK related 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936615:4,734,805...4,753,194
Ensembl chrNW_004936615:4,734,805...4,753,194 		JBrowse link
G Xkr6 XK related 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936675:2,750,401...2,768,457
Ensembl chrNW_004936675:2,751,400...2,983,960 		JBrowse link
G Xkr7 XK related 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:18,907,218...18,935,306
Ensembl chrNW_004936485:18,907,218...18,929,904 		JBrowse link
G Xkr8 XK related 8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:12,180,741...12,187,904
Ensembl chrNW_004936474:12,180,424...12,187,876 		JBrowse link
G Xkr9 XK related 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936648:1,607...5,784
Ensembl chrNW_004936648:1,573...5,784 		JBrowse link
Fc receptor-mediated immune complex endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer2 Fc fragment of IgE receptor II involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,717,010...4,724,664
Ensembl chrNW_004936588:4,719,447...4,724,664 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (MGI:5904203|PMID:28389502) UniProt PMID:28389502 MGI:5904203 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Fcmr Fc mu receptor involved_in ISO (PMID:21908732) UniProt PMID:21908732 NCBI chrNW_004936557:5,707,138...5,718,192 JBrowse link
G LOC101955076 low affinity immunoglobulin gamma Fc region receptor III-A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937131:42,523...49,533 JBrowse link
Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo1g myosin IG involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,788,032...19,802,546
Ensembl chrNW_004936478:19,788,031...19,802,501 		JBrowse link
G protein-coupled receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643 		JBrowse link
G Arr3 arrestin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936762:1,194,251...1,207,914
Ensembl chrNW_004936762:1,194,166...1,208,844 		JBrowse link
G Arrb1 arrestin beta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrb2 arrestin beta 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Calca calcitonin related polypeptide alpha involved_in ISO (PMID:10882736) UniProt PMID:10882736 NCBI chrNW_004936528:3,800,801...3,806,000
Ensembl chrNW_004936528:3,800,577...3,805,004 		JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:14709338 RGD:9685157 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:14709338 RGD:9685157 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:14617818 RGD:1581465 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Drd3 dopamine receptor D3 involved_in ISO
IEA		 RGD
Ensembl		 PMID:14617818 GO_REF:0000107 RGD:1581465 NCBI chrNW_004936536:1,580,732...1,616,726
Ensembl chrNW_004936536:1,580,732...1,616,725 		JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936890:154,252...157,044
Ensembl chrNW_004936890:155,233...156,408 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,711,894...5,729,074
Ensembl chrNW_004936525:5,712,329...5,729,831 		JBrowse link
G LOC101957203 general transcription factor IIH subunit 2 involved_in ISO (PMID:15775968) UniProt PMID:15775968 NCBI chrNW_004936480:72,730...92,868 JBrowse link
G Pld2 phospholipase D2 acts_upstream_of_or_within ISO (PMID:14718562) MGI PMID:14718562 NCBI chrNW_004936677:2,870,664...2,883,545
Ensembl chrNW_004936677:2,870,660...2,883,567 		JBrowse link
G Sag S-antigen visual arrestin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:3,932,118...3,965,651
Ensembl chrNW_004936525:3,931,933...3,964,834 		JBrowse link
insulin receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Lmbrd1 LMBR1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936618:1,694,886...1,792,586
Ensembl chrNW_004936618:1,689,646...1,792,802 		JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 involved_in ISO PMID:9712832
PMID:7592607		 UniProt PMID:7592607 PMID:9712832 RGD:11059573 RGD:11059580 NCBI chrNW_004936706:37,480...53,306 JBrowse link
macropinocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil1 capping protein regulator and myosin 1 linker 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,404,595...1,632,916
Ensembl chrNW_004936671:1,404,589...1,633,328 		JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:18003703 RGD:9685165 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Dock2 dedicator of cytokinesis 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:4,695,202...5,099,038
Ensembl chrNW_004936609:4,695,628...5,099,038 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,867,182...5,911,207
Ensembl chrNW_004936557:5,867,211...5,911,213 		JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:2,130,421...2,159,859
Ensembl chrNW_004936529:2,130,252...2,160,313 		JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Rab34 RAB34, member RAS oncogene family NOT|involved_in ISO (PMID:17881736) UniProt PMID:17881736 NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809 		JBrowse link
G Snx33 sorting nexin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,414,086...34,425,236
Ensembl chrNW_004936471:34,414,474...34,428,784 		JBrowse link
negative regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:20826760) BHF-UCL PMID:20826760 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
negative regulation of caveolin-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prom2 prominin 2 involved_in ISO (PMID:23583380) UniProt PMID:23583380 NCBI chrNW_004936744:73,004...85,911 JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:4,772,236...4,778,149
Ensembl chrNW_004936538:4,772,283...4,778,137 		JBrowse link
negative regulation of clathrin-dependent endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neu3 neuraminidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:3,897,511...3,915,013
Ensembl chrNW_004936498:3,897,485...3,910,115 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 ISO RGD PMID:15066995 RGD:13504745 NCBI chrNW_004936483:18,051,023...18,176,514
Ensembl chrNW_004936483:18,050,899...18,176,519 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920 		JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:4,772,236...4,778,149
Ensembl chrNW_004936538:4,772,283...4,778,137 		JBrowse link
negative regulation of endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:5694857|PMID:26260791) UniProt PMID:26260791 MGI:5694857 NCBI chrNW_004936588:460,308...477,382
Ensembl chrNW_004936588:461,389...477,229 		JBrowse link
G Ank3 ankyrin 3 ISO RGD PMID:31474508 RGD:153344605 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Epha3 EPH receptor A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936610:462,842...799,466
Ensembl chrNW_004936610:462,853...799,364 		JBrowse link
G Lgals3 galectin 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936697:20,861...38,568
Ensembl chrNW_004936697:27,145...38,586 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,181,009...15,217,952
Ensembl chrNW_004936487:15,180,811...15,217,406 		JBrowse link
G Mctp1 multiple C2 and transmembrane domain containing 1 involved_in ISO PMID:26195140 UniProt PMID:26195140 RGD:13210552 NCBI chrNW_004936523:8,050,001...8,553,427
Ensembl chrNW_004936523:8,050,006...8,553,432 		JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004936700:1,790,592...1,873,019
Ensembl chrNW_004936700:1,790,064...1,873,034 		JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11082044) Ensembl
MGI		 PMID:11082044 GO_REF:0000107 NCBI chrNW_004936476:24,574,106...24,622,494
Ensembl chrNW_004936476:24,571,877...24,622,707 		JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11082044) Ensembl
MGI		 PMID:11082044 GO_REF:0000107 NCBI chrNW_004936718:739,133...850,775
Ensembl chrNW_004936718:739,133...801,662 		JBrowse link
G Pacsin3 protein kinase C and casein kinase substrate in neurons 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11082044) Ensembl
MGI		 PMID:11082044 GO_REF:0000107 NCBI chrNW_004936562:1,988,839...1,995,597
Ensembl chrNW_004936562:1,989,662...1,995,580 		JBrowse link
G Rubcn rubicon autophagy regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936784:370,173...438,263
Ensembl chrNW_004936784:383,899...438,275 		JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,936,721...33,958,439
Ensembl chrNW_004936471:33,936,531...33,958,573
Ensembl chrNW_004936471:33,936,531...33,958,573 		JBrowse link
G Snx33 sorting nexin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,414,086...34,425,236
Ensembl chrNW_004936471:34,414,474...34,428,784 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
negative regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923 		JBrowse link
negative regulation of G protein-coupled receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Necab2 N-terminal EF-hand calcium binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:3,779,024...3,802,883
Ensembl chrNW_004936641:3,779,374...3,799,581 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920 		JBrowse link
negative regulation of phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:3,168,599...3,179,369
Ensembl chrNW_004936578:3,168,331...3,171,928 		JBrowse link
G Atg3 autophagy related 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24035364) Ensembl
MGI		 PMID:24035364 GO_REF:0000107 NCBI chrNW_004936536:232,343...257,949
Ensembl chrNW_004936536:232,192...257,954 		JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24035364) Ensembl
MGI		 PMID:24035364 GO_REF:0000107 NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:24035364) MGI PMID:24035364 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Cnn2 calponin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18617524) Ensembl
MGI		 PMID:18617524 GO_REF:0000107 NCBI chrNW_004936588:453,908...459,916
Ensembl chrNW_004936588:453,876...460,015 		JBrowse link
G Csk C-terminal Src kinase ISO RGD PMID:10884975 RGD:5134370 NCBI chrNW_004936471:33,757,778...33,777,871
Ensembl chrNW_004936471:33,757,772...33,778,933 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18276788) MGI
Ensembl		 PMID:18276788 GO_REF:0000107 NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:12385742) MGI PMID:12385742 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G LOC101967799 leukocyte surface antigen CD47 involved_in ISO PMID:21401967 ARUK-UCL PMID:21401967 RGD:13792533 NCBI chrNW_004936645:1,363,406...1,408,624 JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:4,621,222...4,669,808
Ensembl chrNW_004936544:4,618,660...4,670,140 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO (PMID:26745724) UniProt PMID:26745724 NCBI chrNW_004936519:8,759,702...8,790,823 JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:18056380 RGD:2292524 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936826:748,256...753,460
Ensembl chrNW_004936826:747,291...753,442 		JBrowse link
G Sftpd surfactant protein D ISO RGD PMID:12654779 RGD:4144053 NCBI chrNW_004936716:60,754...73,010
Ensembl chrNW_004936716:60,656...73,099 		JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:22630829) AgBase PMID:22630829 NCBI chrNW_004936485:14,979,838...14,999,047
Ensembl chrNW_004936485:14,979,819...14,998,004 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO PMID:21401967
(MGI:6201881|PMID:21401967)		 ARUK-UCL PMID:21401967 MGI:6201881 RGD:13792533 NCBI chrNW_004936485:16,608,317...16,654,552 JBrowse link
G Snx3 sorting nexin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,472,171...4,520,732
Ensembl chrNW_004936564:4,471,652...4,520,785 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:16272332 RGD:1579756 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (MGI:5307186|PMID:22198949) ARUK-UCL PMID:22198949 MGI:5307186 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
negative regulation of pinocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936889:223,137...229,968
Ensembl chrNW_004936889:223,101...229,990 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669 		JBrowse link
G Prom2 prominin 2 involved_in ISO (PMID:23583380) UniProt PMID:23583380 NCBI chrNW_004936744:73,004...85,911 JBrowse link
G Tsc2 TSC complex subunit 2 ISO RGD PMID:9045618 RGD:11568652 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363 		JBrowse link
negative regulation of receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd13a ankyrin repeat domain 13A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:1,581,517...1,617,696
Ensembl chrNW_004936769:1,581,187...1,617,712 		JBrowse link
G Ankrd13b ankyrin repeat domain 13B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,700,063...5,724,335
Ensembl chrNW_004936538:5,705,026...5,724,335 		JBrowse link
G Ankrd13d ankyrin repeat domain 13D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,423,095...2,434,534
Ensembl chrNW_004936599:2,423,048...2,434,897 		JBrowse link
G Anxa2 annexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,274,112...21,329,286
Ensembl chrNW_004936471:21,274,027...21,329,503 		JBrowse link
G Atxn2 ataxin 2 involved_in ISO (PMID:18602463) UniProt PMID:18602463 NCBI chrNW_004936558:4,127,477...4,188,307
Ensembl chrNW_004936558:4,127,477...4,232,393 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:11526121 UniProt PMID:11526121 RGD:8554437 NCBI chrNW_004936595:487,918...513,843
Ensembl chrNW_004936595:485,554...513,815 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:17881561 RGD:12050150 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:20,234,582...20,250,756
Ensembl chrNW_004936477:20,234,533...20,250,751 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23931994) Ensembl
MGI		 PMID:23931994 GO_REF:0000107 NCBI chrNW_004936556:5,915,265...5,934,004
Ensembl chrNW_004936556:5,928,622...5,931,499 		JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23931994) Ensembl
MGI		 PMID:23931994 GO_REF:0000107 NCBI chrNW_004936531:7,968,111...7,973,823
Ensembl chrNW_004936531:7,967,213...7,974,266 		JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004936700:1,790,592...1,873,019
Ensembl chrNW_004936700:1,790,064...1,873,034 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
G Rin3 Ras and Rab interactor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23185384) ARUK-UCL
Ensembl		 PMID:23185384 GO_REF:0000107 NCBI chrNW_004936733:683,309...765,897
Ensembl chrNW_004936733:683,272...765,906 		JBrowse link
G Sdcbp syndecan binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,331,971...14,347,123
Ensembl chrNW_004936496:14,331,662...14,347,197 		JBrowse link
G Wdr54 WD repeat domain 54 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:646,312...649,961
Ensembl chrNW_004936556:645,933...662,452 		JBrowse link
negative regulation of receptor-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:1917954) BHF-UCL PMID:1917954 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:1917954) BHF-UCL PMID:1917954 NCBI chrNW_004936706:1,531,219...1,531,921 JBrowse link
G Apoc3 apolipoprotein C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,106,927...2,108,412
Ensembl chrNW_004936542:2,106,318...2,108,603 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16533754) Ensembl
MGI		 PMID:16533754 GO_REF:0000107 NCBI chrNW_004936543:7,405,070...7,447,940
Ensembl chrNW_004936543:7,404,944...7,447,173 		JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:21810484) ARUK-UCL
Ensembl		 PMID:21810484 GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:4,125,182...4,232,239
Ensembl chrNW_004936492:4,125,173...4,236,062 		JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936501:8,762,386...8,840,123
Ensembl chrNW_004936501:8,762,376...8,840,915 		JBrowse link
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:6,051,021...6,062,275
Ensembl chrNW_004936541:6,053,391...6,059,505 		JBrowse link
G Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:6,168,186...6,209,924
Ensembl chrNW_004936541:6,168,904...6,182,787 		JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936994:107,973...126,317
Ensembl chrNW_004936994:108,213...126,435 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:9,198,744...9,279,854
Ensembl chrNW_004936485:9,195,110...9,279,920 		JBrowse link
neutrophil clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413 		JBrowse link
G Axl AXL receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23878224) Ensembl
MGI		 PMID:23878224 GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:18768881) UniProt PMID:18768881 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G LOC101964770 C-C chemokine receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:285,559...287,198
Ensembl chrNW_004936596:285,559...286,680 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23878224) Ensembl
MGI		 PMID:23878224 GO_REF:0000107 NCBI chrNW_004936783:607,425...704,879
Ensembl chrNW_004936783:607,382...704,889 		JBrowse link
G Xkr8 XK related 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,180,741...12,187,904
Ensembl chrNW_004936474:12,180,424...12,187,876 		JBrowse link
opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967799 leukocyte surface antigen CD47 acts_upstream_of_or_within ISO (PMID:14634079) MGI PMID:14634079 NCBI chrNW_004936645:1,363,406...1,408,624 JBrowse link
G Ptx3 pentraxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14726497) Ensembl
MGI		 PMID:14726497 GO_REF:0000107 NCBI chrNW_004936519:4,303,549...4,309,143
Ensembl chrNW_004936519:4,303,464...4,309,173 		JBrowse link
G Sftpd surfactant protein D ISO RGD PMID:19017984 RGD:4143523 NCBI chrNW_004936716:60,754...73,010
Ensembl chrNW_004936716:60,656...73,099 		JBrowse link
G Spon2 spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14691481) Ensembl
MGI		 PMID:14691481 GO_REF:0000107 NCBI chrNW_004936477:22,087,450...22,093,677
Ensembl chrNW_004936477:22,087,394...22,093,723 		JBrowse link
phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23100514)
(PMID:22665498)		 Ensembl
MGI		 PMID:22665498 PMID:23100514 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:22665498)
(PMID:23100514)		 MGI PMID:22665498 PMID:23100514 NCBI chrNW_004936481:9,823,790...9,847,291
Ensembl chrNW_004936481:9,824,392...9,847,104 		JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of ISO (PMID:17116687) MGI PMID:17116687 NCBI chrNW_004936538:6,674,595...6,819,511
Ensembl chrNW_004936538:6,674,907...6,816,674 		JBrowse link
G Anxa1 annexin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:9,124,314...9,142,372
Ensembl chrNW_004936503:9,124,264...9,142,413 		JBrowse link
G Anxa11 annexin A11 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936521:231,294...275,138
Ensembl chrNW_004936521:228,298...275,151 		JBrowse link
G Anxa3 annexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:2,153,752...2,216,498
Ensembl chrNW_004936676:2,153,689...2,216,627 		JBrowse link
G Axl AXL receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19602523) Ensembl
MGI		 PMID:19602523 GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17116687) Ensembl
MGI		 PMID:17116687 GO_REF:0000107 NCBI chrNW_004936619:288,377...432,297
Ensembl chrNW_004936619:288,340...432,315 		JBrowse link
G Bltp1 bridge-like lipid transfer protein family member 1 involved_in ISO (PMID:31540829) UniProt PMID:31540829 NCBI chrNW_004936662:1,329,646...1,526,610
Ensembl chrNW_004936662:1,330,446...1,526,633 		JBrowse link
G Cdc42se1 CDC42 small effector 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936580:1,268,202...1,276,485
Ensembl chrNW_004936580:1,268,195...1,276,361 		JBrowse link
G Cdc42se2 CDC42 small effector 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936647:3,669,141...3,734,515
Ensembl chrNW_004936647:3,669,209...3,734,491 		JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10216107), (PMID:11861297) Ensembl
MGI		 PMID:10216107 PMID:11861297 GO_REF:0000107 NCBI chrNW_004936722:1,207,718...1,209,482
Ensembl chrNW_004936722:1,207,743...1,209,482 		JBrowse link
G Cnn2 calponin 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18617524) Ensembl
MGI		 PMID:18617524 GO_REF:0000107 NCBI chrNW_004936588:453,908...459,916
Ensembl chrNW_004936588:453,876...460,015 		JBrowse link
G Coro1a coronin 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,338,542...12,344,236
Ensembl chrNW_004936501:12,338,542...12,344,265 		JBrowse link
G Cryba1 crystallin beta A1 ISO RGD PMID:21266465 RGD:126925759 NCBI chrNW_004936538:5,392,159...5,400,583
Ensembl chrNW_004936538:5,392,105...5,400,070 		JBrowse link
G CUNH1orf43 chromosome unknown C1orf43 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:3,902,345...3,914,293
Ensembl chrNW_004936580:3,906,135...3,914,298 		JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17932563) Ensembl
MGI		 PMID:17932563 GO_REF:0000107 NCBI chrNW_004936750:389,913...430,783
Ensembl chrNW_004936750:389,845...432,460 		JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11595183) UniProt
MGI
Ensembl		 PMID:11595183 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936478:12,308,255...12,754,957
Ensembl chrNW_004936478:12,306,450...12,754,963 		JBrowse link
G Elmo2 engulfment and cell motility 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936514:6,706,236...6,745,538
Ensembl chrNW_004936514:6,706,236...6,746,006 		JBrowse link
G Elmo3 engulfment and cell motility 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936475:17,670,651...17,677,367
Ensembl chrNW_004936475:17,670,517...17,675,039 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in
acts_upstream_of		 ISO (PMID:2142460)
(PMID:12385742)		 ARUK-UCL
MGI		 PMID:2142460 PMID:12385742 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Gas6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:27,116...57,158
Ensembl chrNW_004936472:32,123...54,028 		JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:8125254) MGI PMID:8125254 NCBI chrNW_004936485:18,996,016...19,017,908
Ensembl chrNW_004936485:18,978,412...19,017,908 		JBrowse link
G Icam5 intercellular adhesion molecule 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15452145) Ensembl
MGI		 PMID:15452145 GO_REF:0000107 NCBI chrNW_004936659:630,177...636,586
Ensembl chrNW_004936659:630,235...636,425 		JBrowse link
G Irf8 interferon regulatory factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18045875) Ensembl
MGI		 PMID:18045875 GO_REF:0000107 NCBI chrNW_004936641:2,608,109...2,622,446
Ensembl chrNW_004936641:2,608,100...2,622,409 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (MGI:85444|PMID:8986723) UniProt PMID:8986723 MGI:85444 NCBI chrNW_004936543:8,460,526...8,508,524
Ensembl chrNW_004936543:8,461,307...8,508,524 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO PMID:17410128 ARUK-UCL PMID:17410128 RGD:13673830 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:1,760,924...1,771,022
Ensembl chrNW_004936594:1,760,853...1,770,765 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Lep leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334 		JBrowse link
G Lepr leptin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444 		JBrowse link
G LOC101960713 CD302 antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:18,839,750...18,963,570
Ensembl chrNW_004936469:18,935,870...18,963,872
Ensembl chrNW_004936469:18,935,870...18,963,872 		JBrowse link
G LOC101961846 neutrophil elastase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15034066) Ensembl
MGI
TreeGrafter		 PMID:15034066 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
G LOC101974928 protein C1orf43 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004942867:7...3,153 JBrowse link
G LOC101975211 protein C1orf43 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004942913:7...3,098 JBrowse link
G LOC101977599 protein C1orf43 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936682:1,400,810...1,402,689 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase involved_in ISO
IEA		 RGD
Ensembl		 PMID:11861639 GO_REF:0000107 RGD:1299193 NCBI chrNW_004936783:607,425...704,879
Ensembl chrNW_004936783:607,382...704,889 		JBrowse link
G Mesd mesoderm development LRP chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:19,697,241...19,706,719
Ensembl chrNW_004936483:19,696,739...19,708,447 		JBrowse link
G Mex3b mex-3 RNA binding family member B acts_upstream_of ISO (PMID:24803656) MGI PMID:24803656 NCBI chrNW_004936483:18,766,000...18,771,924
Ensembl chrNW_004936483:18,766,000...18,771,949 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Myo1g myosin IG involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24310084) Ensembl
MGI		 PMID:24310084 GO_REF:0000107 NCBI chrNW_004936478:19,788,032...19,802,546
Ensembl chrNW_004936478:19,788,031...19,802,501 		JBrowse link
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743369) Ensembl
MGI		 PMID:12743369 GO_REF:0000107 NCBI chrNW_004936498:5,758,572...5,824,526
Ensembl chrNW_004936498:5,751,779...5,824,378 		JBrowse link
G Ncf2 neutrophil cytosolic factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936481:6,300,894...6,325,878
Ensembl chrNW_004936481:6,301,012...6,324,787 		JBrowse link
G Ncf4 neutrophil cytosolic factor 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936492:4,001,711...4,015,253
Ensembl chrNW_004936492:4,001,898...4,010,456 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:32183151) MGI PMID:32183151 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19139201) Ensembl
MGI		 PMID:19139201 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO PMID:17410128 ARUK-UCL PMID:17410128 RGD:13673830 NCBI chrNW_004936498:2,468,020...2,501,344
Ensembl chrNW_004936498:2,500,128...2,501,114 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:4,873,459...4,919,787
Ensembl chrNW_004936541:4,873,182...4,937,500 		JBrowse link
G Pld4 phospholipase D family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22102906) Ensembl
MGI
TreeGrafter		 PMID:22102906 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936621:515,710...523,317
Ensembl chrNW_004936621:515,636...523,359 		JBrowse link
G Rab11fip2 RAB11 family interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:7,692,577...7,729,736
Ensembl chrNW_004936486:7,691,752...7,729,742 		JBrowse link
G Rap1gap RAP1 GTPase activating protein acts_upstream_of ISO (PMID:24803656) MGI PMID:24803656 NCBI chrNW_004936474:7,242,528...7,284,342
Ensembl chrNW_004936474:7,242,824...7,284,395 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18045875) Ensembl
MGI		 PMID:18045875 GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Slc48a1 solute carrier family 48 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,672,952...5,680,502
Ensembl chrNW_004936512:5,672,952...5,684,113 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:4849340|PMID:21041449) UniProt PMID:21041449 MGI:4849340 NCBI chrNW_004936581:1,516,199...1,557,992
Ensembl chrNW_004936581:1,512,855...1,559,679 		JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:19,029,181...19,079,468
Ensembl chrNW_004936485:19,029,073...19,080,830 		JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936529:1,853,120...1,856,637 JBrowse link
G Unc13d unc-13 homolog D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17420270) Ensembl
MGI		 PMID:17420270 GO_REF:0000107 NCBI chrNW_004936594:1,008,215...1,023,023
Ensembl chrNW_004936594:1,008,327...1,021,878 		JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15249579) Ensembl
MGI		 PMID:15249579 GO_REF:0000107 NCBI chrNW_004936588:4,058,312...4,107,330
Ensembl chrNW_004936588:4,058,343...4,107,109 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936721:634,685...641,248
Ensembl chrNW_004936721:634,706...641,082 		JBrowse link
phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10878804) Ensembl
MGI		 PMID:10878804 GO_REF:0000107 NCBI chrNW_004936559:7,177,887...7,312,660
Ensembl chrNW_004936559:7,177,904...7,312,741 		JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,907,493...1,909,350
Ensembl chrNW_004936727:1,907,505...1,909,338 		JBrowse link
G Arhgap12 Rho GTPase activating protein 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:407,639...514,268
Ensembl chrNW_004936574:407,639...506,950 		JBrowse link
G Arhgap25 Rho GTPase activating protein 25 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936491:13,055,790...13,138,370
Ensembl chrNW_004936491:13,055,790...13,138,227 		JBrowse link
G Bin2 bridging integrator 2 involved_in ISO (PMID:23285027) UniProt PMID:23285027 NCBI chrNW_004936512:8,869,131...8,901,171 JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:26465210) UniProt PMID:26465210 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16522634) Ensembl
MGI		 PMID:16522634 GO_REF:0000107 NCBI chrNW_004936516:1,678,610...1,760,099
Ensembl chrNW_004936516:1,678,653...1,760,294 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within ISO (PMID:14707091) MGI PMID:14707091 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:12,308,255...12,754,957
Ensembl chrNW_004936478:12,306,450...12,754,963 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:11237803), (PMID:11911823)
(PMID:11901193)		 MGI PMID:11237803 PMID:11901193 PMID:11911823 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11911824)
(PMID:11911823), (PMID:9551950)		 Ensembl
MGI		 PMID:9551950 PMID:11911823 PMID:11911824 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:8769481) MGI PMID:8769481 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Gsn gelsolin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936487:9,749,755...9,802,787
Ensembl chrNW_004936487:9,764,944...9,802,841 		JBrowse link
G Gulp1 GULP PTB domain containing engulfment adaptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11729193) MGI
Ensembl		 PMID:11729193 GO_REF:0000107 NCBI chrNW_004936506:9,233,590...9,501,139
Ensembl chrNW_004936506:9,234,691...9,332,911 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:18414680 GO_REF:0000118 RGD:2316597 NCBI chrNW_004936515:6,030,402...6,051,161 JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (MGI:5319446|PMID:22438044), (MGI:5905548|PMID:20199584), (MGI:6189359|PMID:22632727) ARUK-UCL PMID:20199584 PMID:22438044 PMID:22632727 MGI:5319446 MGI:5905548 MGI:6189359 NCBI chrNW_004936543:8,460,526...8,508,524
Ensembl chrNW_004936543:8,461,307...8,508,524 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5905548|PMID:20199584) ARUK-UCL PMID:20199584 MGI:5905548 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194 		JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230 		JBrowse link
G Marco macrophage receptor with collagenous structure involved_in ISO PMID:15987691 ARUK-UCL PMID:15987691 RGD:13432286 NCBI chrNW_004936469:51,323,746...51,366,551 JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936573:5,345,282...5,391,946
Ensembl chrNW_004936573:5,328,526...5,388,901 		JBrowse link
G Myh9 myosin heavy chain 9 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:5315376|PMID:10934045) UniProt PMID:10934045 MGI:5315376 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Sh3bp1 SH3 domain binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,430,099...3,440,432
Ensembl chrNW_004936492:3,429,949...3,440,334 		JBrowse link
G Sirpa signal regulatory protein alpha acts_upstream_of_or_within ISO (PMID:14634079) MGI PMID:14634079 NCBI chrNW_004936485:16,608,317...16,654,552 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19155473) Ensembl
MGI		 PMID:19155473 GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 acts_upstream_of_or_within ISO (PMID:19155473) MGI PMID:19155473 NCBI chrNW_004936476:18,603,620...18,612,050 JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO PMID:15133481 UniProt PMID:15133481 RGD:4892614 NCBI chrNW_004936958:345,055...393,384 JBrowse link
phagocytosis, recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061696) Ensembl
MGI		 PMID:16061696 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14707091) TreeGrafter
MGI		 PMID:14707091 GO_REF:0000118 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Colec12 collectin subfamily member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:169,084...350,209
Ensembl chrNW_004936550:169,084...350,501 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11911824)
(PMID:11911823), (PMID:9551950)		 Ensembl
MGI		 PMID:9551950 PMID:11911823 PMID:11911824 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785 		JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230 		JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO RGD PMID:12016218 RGD:1304245 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G Sirpa signal regulatory protein alpha acts_upstream_of_or_within ISO (PMID:14634079) MGI PMID:14634079 NCBI chrNW_004936485:16,608,317...16,654,552 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Tub TUB bipartite transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19837063)
(PMID:20978472)		 Ensembl
MGI		 PMID:19837063 PMID:20978472 GO_REF:0000107 NCBI chrNW_004936528:9,829,889...9,912,645
Ensembl chrNW_004936528:9,834,954...9,855,080 		JBrowse link
G Tulp1 TUB like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19837063)
(PMID:20978472)		 Ensembl
MGI		 PMID:19837063 PMID:20978472 GO_REF:0000107 NCBI chrNW_004936476:23,744,707...23,757,002
Ensembl chrNW_004936476:23,744,757...23,756,565 		JBrowse link
phagolysosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1a coronin 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,338,542...12,344,236
Ensembl chrNW_004936501:12,338,542...12,344,265 		JBrowse link
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12743369) Ensembl
MGI		 PMID:12743369 GO_REF:0000107 NCBI chrNW_004936498:5,758,572...5,824,526
Ensembl chrNW_004936498:5,751,779...5,824,378 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11544318) Ensembl
MGI		 PMID:11544318 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Srpx sushi repeat containing protein X-linked involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19368996) Ensembl
MGI
TreeGrafter		 PMID:19368996 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936502:5,010,692...5,107,221
Ensembl chrNW_004936502:5,010,682...5,107,254 		JBrowse link
phagosome-lysosome docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
phagosome-lysosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,430,939...4,475,186
Ensembl chrNW_004936577:4,430,898...4,475,212 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:7,193,726...7,225,415
Ensembl chrNW_004936493:7,193,709...7,228,625 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078 		JBrowse link
G Pla2g5 phospholipase A2 group V involved_in ISO (MGI:3841317|PMID:19342668) UniProt PMID:19342668 MGI:3841317 NCBI chrNW_004936474:6,131,915...6,150,810
Ensembl chrNW_004936474:6,131,884...6,150,819 		JBrowse link
G Rab20 RAB20, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,234,826...2,264,613
Ensembl chrNW_004936472:2,234,873...2,264,622 		JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:6,673,092...6,679,715
Ensembl chrNW_004936557:6,673,065...6,683,468 		JBrowse link
G Rab32 RAB32, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:35,620...51,809 JBrowse link
G Rab34 RAB34, member RAS oncogene family involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809 		JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936736:1,304,290...1,360,412
Ensembl chrNW_004936736:1,304,185...1,361,221 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936551:750,940...778,432
Ensembl chrNW_004936551:746,936...778,432 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:6,504,562...6,519,219
Ensembl chrNW_004936557:6,504,509...6,519,219 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:3690533|PMID:16982801) UniProt PMID:16982801 MGI:3690533 NCBI chrNW_004936581:1,516,199...1,557,992
Ensembl chrNW_004936581:1,512,855...1,559,679 		JBrowse link
G Tmem175 transmembrane protein 175 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,239,093...22,254,028
Ensembl chrNW_004936477:22,239,093...22,254,439 		JBrowse link
phagosome-lysosome fusion involved in apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO (PMID:26284655) MGI PMID:26284655 NCBI chrNW_004936471:7,540,647...7,618,783 JBrowse link
pinocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd4 EH domain containing 4 ISO RGD PMID:12011113 RGD:632501 NCBI chrNW_004936471:5,205,185...5,294,507
Ensembl chrNW_004936471:5,205,183...5,294,557 		JBrowse link
G LOC101966732 sorting nexin-5-like involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936584:1,143,173...1,144,374 JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16542649) MGI
Ensembl		 PMID:16542649 GO_REF:0000107 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
G Snx5 sorting nexin 5 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:2,167,987...2,191,157
Ensembl chrNW_004936485:2,168,243...2,190,402 		JBrowse link
positive regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2 complement C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,602,400...1,615,974
Ensembl chrNW_004936727:1,602,398...1,616,060 		JBrowse link
G C3 complement C3 involved_in ISO (PMID:19302245) BHF-UCL PMID:19302245 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G LOC101975827 complement C4-A involved_in ISO (PMID:19302245) BHF-UCL PMID:19302245 NCBI chrNW_004936727:1,556,204...1,570,084 JBrowse link
positive regulation of caveolin-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in ISO PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Itsn1 intersectin 1 ISO RGD PMID:19258322 RGD:13461864 NCBI chrNW_004936500:8,490,514...8,678,127
Ensembl chrNW_004936500:8,468,940...8,612,942 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chrNW_004936497:6,106,284...6,318,339
Ensembl chrNW_004936497:6,106,268...6,318,354 		JBrowse link
positive regulation of clathrin-dependent endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Dgkd diacylglycerol kinase delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:3,826,929...3,897,618
Ensembl chrNW_004936525:3,828,939...3,897,529 		JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:11925437 RGD:728683 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chrNW_004936605:1,741,832...1,816,694
Ensembl chrNW_004936605:1,742,776...1,816,690 		JBrowse link
positive regulation of endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 ISO RGD PMID:18524856 RGD:5148004 NCBI chrNW_004936477:20,695,109...20,766,053
Ensembl chrNW_004936477:20,691,951...20,766,152 		JBrowse link
G Alms1 ALMS1 centrosome and basal body associated protein ISO RGD PMID:30385718 RGD:151361229 NCBI chrNW_004936491:17,152,759...17,342,648 JBrowse link
G Amph amphiphysin ISO RGD PMID:9348539 RGD:631926 NCBI chrNW_004936478:13,959,669...14,183,835
Ensembl chrNW_004936478:13,960,771...14,183,764 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 ISO RGD PMID:19240038 RGD:13461853 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:7683668), (PMID:8300609) ARUK-UCL PMID:7683668 PMID:8300609 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Arf1 ADP ribosylation factor 1 ISO RGD PMID:8294513 RGD:9684859 NCBI chrNW_004936864:117,510...119,612 JBrowse link
G Bin1 bridging integrator 1 ISO RGD PMID:9348539 RGD:631926 NCBI chrNW_004936469:44,128,308...44,185,739
Ensembl chrNW_004936469:44,127,970...44,185,246 		JBrowse link
G Caly calcyon neuron specific vesicular protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,463,989...19,471,976
Ensembl chrNW_004936486:19,464,158...19,472,176 		JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:17715130 RGD:2289117 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Cbll1 Cbl proto-oncogene like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11836526) Ensembl
MGI		 PMID:11836526 GO_REF:0000107 NCBI chrNW_004936479:16,382,280...16,401,997
Ensembl chrNW_004936479:16,380,937...16,402,345 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:5284790|PMID:16027136) BHF-UCL PMID:16027136 MGI:5284790 NCBI chrNW_004936524:2,765,271...2,767,259
Ensembl chrNW_004936524:2,765,267...2,767,385 		JBrowse link
G Cd14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd151 CD151 molecule (Raph blood group) acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17716972) MGI
Ensembl		 PMID:17716972 GO_REF:0000107 NCBI chrNW_004936888:592,325...597,116
Ensembl chrNW_004936888:592,849...597,107 		JBrowse link
G Cd63 CD63 molecule ISO RGD PMID:14660791 RGD:1302249 NCBI chrNW_004936646:196,002...199,177
Ensembl chrNW_004936646:191,128...199,777 		JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:23936366) MGI PMID:23936366 NCBI chrNW_004936562:2,269,341...2,369,098
Ensembl chrNW_004936562:2,269,332...2,371,224 		JBrowse link
G Clip3 CAP-Gly domain containing linker protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936922:50,230...63,215
Ensembl chrNW_004936922:49,894...63,158 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA
ISO		 Ensembl
TreeGrafter
RGD		 PMID:19000037 GO_REF:0000107 GO_REF:0000118 RGD:7243162 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Dcx doublecortin ISO RGD PMID:22649224 RGD:12904752 NCBI chrNW_004936499:3,905,262...4,004,457
Ensembl chrNW_004936499:3,903,376...4,005,508 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427 		JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:18435821 RGD:9685294 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:18045921 RGD:10401629 NCBI chrNW_004936501:7,160,134...7,205,231
Ensembl chrNW_004936501:7,160,134...7,207,377 		JBrowse link
G Flot1 flotillin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477453) Ensembl
MGI		 PMID:18477453 GO_REF:0000107 NCBI chrNW_004936691:1,060,013...1,459,736
Ensembl chrNW_004936691:1,059,994...1,459,740 		JBrowse link
G Itgb1 integrin subunit beta 1 ISO fibronectin endocytosis RGD PMID:18577581 RGD:2325690 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:10766831 RGD:1641845 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637 		JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:19340093 RGD:6902911 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:1,987,989...2,146,473
Ensembl chrNW_004936520:1,987,045...2,146,540 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Tfr2 transferrin receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:667,570...681,872
Ensembl chrNW_004936543:668,157...682,174 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24305805) Ensembl
MGI		 PMID:24305805 GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
positive regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:3662940|PMID:16908670) Alzheimers_University_of_Toronto PMID:16908670 MGI:3662940 NCBI chrNW_004936588:460,308...477,382
Ensembl chrNW_004936588:461,389...477,229 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
positive regulation of G protein-coupled receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apela apelin receptor early endogenous ligand involved_in ISO (PMID:25639753) UniProt PMID:25639753 NCBI chrNW_004936555:969,902...978,736 JBrowse link
G Apln apelin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:1,889,930...1,899,811
Ensembl chrNW_004936479:1,890,229...1,899,730 		JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:18723082) ARUK-UCL PMID:18723082 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
positive regulation of macropinocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
positive regulation of opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colec10 collectin subfamily member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:27,416,471...27,449,206
Ensembl chrNW_004936470:27,416,494...27,449,206 		JBrowse link
G Colec11 collectin subfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:1,757,288...1,776,053
Ensembl chrNW_004936532:1,749,894...1,776,001 		JBrowse link
G Fcn3 ficolin 3 involved_in ISO (PMID:11907111) ComplexPortal PMID:11907111 NCBI chrNW_004936474:11,680,166...11,685,214 JBrowse link
G LOC101965964 ficolin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,421,092...2,428,240
Ensembl chrNW_004936669:2,421,087...2,431,714 		JBrowse link
G Myo18a myosin XVIIIA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,257,165...5,351,757
Ensembl chrNW_004936538:5,258,401...5,344,669 		JBrowse link
G Pla2g5 phospholipase A2 group V involved_in ISO (MGI:3841317|PMID:19342668) UniProt PMID:19342668 MGI:3841317 NCBI chrNW_004936474:6,131,915...6,150,810
Ensembl chrNW_004936474:6,131,884...6,150,819 		JBrowse link
positive regulation of phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:5553241|PMID:20495215), (MGI:6271506|PMID:27472885) UniProt PMID:20495215 PMID:27472885 MGI:5553241 MGI:6271506 NCBI chrNW_004936588:460,308...477,382
Ensembl chrNW_004936588:461,389...477,229 		JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:17116687) MGI PMID:17116687 NCBI chrNW_004936538:6,674,595...6,819,511
Ensembl chrNW_004936538:6,674,907...6,816,674 		JBrowse link
G Ahsg alpha 2-HS glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:3,332,934...3,339,903
Ensembl chrNW_004936578:3,332,934...3,339,903 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,111,055...2,112,626
Ensembl chrNW_004936542:2,111,052...2,112,854 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:520,420...521,726
Ensembl chrNW_004936903:520,650...521,910 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17116687) Ensembl
MGI		 PMID:17116687 GO_REF:0000107 NCBI chrNW_004936619:288,377...432,297
Ensembl chrNW_004936619:288,340...432,315 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:28352114 RGD:151665126 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
G C3 complement C3 acts_upstream_of_or_within ISO (PMID:11901193) MGI PMID:11901193 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Calr calreticulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,994,695...1,999,070
Ensembl chrNW_004936659:1,994,648...1,999,430 		JBrowse link
G Camk1d calcium/calmodulin dependent protein kinase ID involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:2,626,909...2,768,304
Ensembl chrNW_004936484:2,632,107...3,023,869 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:23238794 RGD:8696010 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14707091) TreeGrafter
MGI		 PMID:14707091 GO_REF:0000118 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:12802072 RGD:9685290 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Dock2 dedicator of cytokinesis 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:4,695,202...5,099,038
Ensembl chrNW_004936609:4,695,628...5,099,038 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11237803), (PMID:11911823)
(PMID:11901193)		 TreeGrafter
MGI		 PMID:11237803 PMID:11901193 PMID:11911823 GO_REF:0000118 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11911823), (PMID:9551950)
(PMID:11911824)		 Ensembl
MGI		 PMID:9551950 PMID:11911823 PMID:11911824 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (PMID:8769481) MGI PMID:8769481 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Gas6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:27,116...57,158
Ensembl chrNW_004936472:32,123...54,028 		JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO PMID:12933836 UniProt PMID:12933836 RGD:632788 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9886410 RGD:10059405 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:4454469|PMID:20368278) ARUK-UCL PMID:20368278 MGI:4454469 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Il15 interleukin 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:6,344,348...6,358,803
Ensembl chrNW_004936535:6,344,395...6,350,197 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:8,590,945...8,623,478
Ensembl chrNW_004936484:8,590,482...8,623,469 		JBrowse link
G Il2rb interleukin 2 receptor subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,795,940...3,805,822
Ensembl chrNW_004936492:3,795,940...3,805,774 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:487,414...491,028
Ensembl chrNW_004936762:487,380...491,044 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (PMID:25453580) AgBase PMID:25453580 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194 		JBrowse link
G Lman2 lectin, mannose binding 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:1,619,380...1,638,469
Ensembl chrNW_004936597:1,616,297...1,638,569 		JBrowse link
G LOC101967032 cytochrome b-245 light chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991 		JBrowse link
G LOC101967799 leukocyte surface antigen CD47 acts_upstream_of_or_within ISO (PMID:14634079) RGD
MGI		 PMID:14634079 PMID:23238794 RGD:8696010 NCBI chrNW_004936645:1,363,406...1,408,624 JBrowse link
G LOC101971779 N-formyl peptide receptor 2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937026:169,334...170,717
Ensembl chrNW_004937026:167,935...170,389 		JBrowse link
G LOC101972741 signal-regulatory protein beta-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:16,788,926...16,807,352 JBrowse link
G LOC101977501 mannose-binding protein A-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936716:89,232...91,728 JBrowse link
G Lrp1 LDL receptor related protein 1 ISO RGD PMID:19299462 RGD:13800552 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Lyar Ly1 antibody reactive involved_in ISO (MGI:6107438|PMID:25735755) UniProt PMID:25735755 MGI:6107438 NCBI chrNW_004936477:16,934,401...16,958,722 JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase involved_in ISO
IEA		 RGD
Ensembl		 PMID:11592982 GO_REF:0000107 RGD:69668 NCBI chrNW_004936783:607,425...704,879
Ensembl chrNW_004936783:607,382...704,889 		JBrowse link
G Mex3b mex-3 RNA binding family member B acts_upstream_of_or_within ISO (PMID:24803656) MGI PMID:24803656 NCBI chrNW_004936483:18,766,000...18,771,924
Ensembl chrNW_004936483:18,766,000...18,771,949 		JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:19117932 RGD:6902913 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19139201) Ensembl
MGI		 PMID:19139201 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Pla2g5 phospholipase A2 group V involved_in ISO (MGI:3639848|PMID:16407308) UniProt PMID:16407308 MGI:3639848 NCBI chrNW_004936474:6,131,915...6,150,810
Ensembl chrNW_004936474:6,131,884...6,150,819 		JBrowse link
G Pros1 protein S ISO RGD PMID:15949798 RGD:2300013 NCBI chrNW_004936666:18,303...110,357
Ensembl chrNW_004936666:19,387...110,014 		JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO RGD PMID:12912913 RGD:1299194 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,161,764...1,234,800
Ensembl chrNW_004936562:1,165,304...1,211,817 		JBrowse link
G Ptx3 pentraxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14726497) Ensembl
MGI		 PMID:14726497 GO_REF:0000107 NCBI chrNW_004936519:4,303,549...4,309,143
Ensembl chrNW_004936519:4,303,464...4,309,173 		JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561
Ensembl chrNW_004936471:16,738,230...16,815,943 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004936690:275,840...363,752
Ensembl chrNW_004936690:315,752...366,413 		JBrowse link
G Rap1gap RAP1 GTPase activating protein acts_upstream_of_or_within ISO (PMID:24803656) MGI PMID:24803656 NCBI chrNW_004936474:7,242,528...7,284,342
Ensembl chrNW_004936474:7,242,824...7,284,395 		JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004936487:18,305,537...18,411,170
Ensembl chrNW_004936487:18,305,488...18,410,952 		JBrowse link
G Sftpd surfactant protein D ISO RGD PMID:15591410 RGD:4144046 NCBI chrNW_004936716:60,754...73,010
Ensembl chrNW_004936716:60,656...73,099 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14634079) TreeGrafter
MGI		 PMID:14634079 GO_REF:0000118 NCBI chrNW_004936485:16,608,317...16,654,552 JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18984740)
(PMID:18456389)		 Ensembl
MGI		 PMID:18456389 PMID:18984740 GO_REF:0000107 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Sod1 superoxide dismutase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:10,345,154...10,352,873
Ensembl chrNW_004936500:10,345,154...10,352,867 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Tub TUB bipartite transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:9,829,889...9,912,645
Ensembl chrNW_004936528:9,834,954...9,855,080 		JBrowse link
G Tulp1 TUB like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,744,707...23,757,002
Ensembl chrNW_004936476:23,744,757...23,756,565 		JBrowse link
positive regulation of phagocytosis, engulfment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end-product specific receptor ISO RGD PMID:23238794 RGD:8696010 NCBI chrNW_004936727:1,418,342...1,422,005
Ensembl chrNW_004936727:1,418,799...1,422,147 		JBrowse link
G Ano6 anoctamin 6 involved_in ISO (MGI:5634870|PMID:25651887) UniProt PMID:25651887 MGI:5634870 NCBI chrNW_004936512:3,649,103...3,736,274
Ensembl chrNW_004936512:3,540,129...3,732,776 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
G C3 complement C3 involved_in ISO (MGI:5905548|PMID:20199584)
(MGI:5319446|PMID:22438044), (MGI:6189359|PMID:22632727)		 ARUK-UCL PMID:20199584 PMID:22438044 PMID:22632727 MGI:5319446 MGI:5905548 MGI:6189359 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16061696) Ensembl
MGI		 PMID:16061696 GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia ISO RGD PMID:19657115 RGD:9685698 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785 		JBrowse link
G Gata2 GATA binding protein 2 ISO RGD PMID:12933836 RGD:632788 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:9284952 RGD:2307413 NCBI chrNW_004936480:14,320,292...14,417,828
Ensembl chrNW_004936480:14,320,692...14,417,786 		JBrowse link
G Lbp lipopolysaccharide binding protein ISO RGD PMID:11104656 RGD:9685187 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,683,330...11,734,423
Ensembl chrNW_004936512:11,683,321...11,734,391 		JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:32514138) ARUK-UCL
Ensembl		 PMID:32514138 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:15940641 RGD:8553017 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Rab31 RAB31, member RAS oncogene family involved_in ISO (MGI:6271154|PMID:25568335) UniProt PMID:25568335 MGI:6271154 NCBI chrNW_004936626:1,628,379...1,673,150
Ensembl chrNW_004936626:1,628,451...1,660,510 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936582:877,241...908,697
Ensembl chrNW_004936582:877,474...913,770 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:32514138) ARUK-UCL
TreeGrafter
Ensembl		 PMID:32514138 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
positive regulation of pinocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (MGI:3687817|PMID:10954430) UniProt PMID:10954430 MGI:3687817 NCBI chrNW_004936801:1,333,077...1,402,885
Ensembl chrNW_004936801:1,333,077...1,404,054 		JBrowse link
G Ankfy1 ankyrin repeat and FYVE domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:746,408...836,495
Ensembl chrNW_004936677:749,379...836,480 		JBrowse link
G Axl AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (MGI:5607692|PMID:24792215) UniProt PMID:24792215 MGI:5607692 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
positive regulation of receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (MGI:4840150|PMID:20956301) UniProt PMID:20956301 MGI:4840150 NCBI chrNW_004936560:2,881,631...3,057,256
Ensembl chrNW_004936560:2,881,977...3,038,725 		JBrowse link
G Angpt1 angiopoietin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:12105201 RGD:13461854 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Arrb1 arrestin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO
IEA		 Oprm1 RGD
Ensembl		 PMID:16120787 GO_REF:0000107 RGD:5510008 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Atad1 ATPase family AAA domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:1,377,168...1,423,696
Ensembl chrNW_004936735:1,376,526...1,422,126 		JBrowse link
G Cd63 CD63 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:196,002...199,177
Ensembl chrNW_004936646:191,128...199,777 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in ISO (MGI:5476876|PMID:23354168) CACAO PMID:23354168 MGI:5476876 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:18809670 RGD:2311559 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 ISO RGD PMID:17989303 RGD:8553895 NCBI chrNW_004936552:1,787,687...1,926,516 JBrowse link
G Egf epidermal growth factor involved_in ISO (PMID:22732145) ParkinsonsUK-UCL PMID:22732145 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311 		JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO (PMID:15514116) BHF-UCL PMID:15514116 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Insr insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668 		JBrowse link
G LOC101967553 synaptojanin-2-binding protein involved_in ISO (MGI:3623710|PMID:16648306) UniProt PMID:16648306 MGI:3623710 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914 		JBrowse link
G LOC101969021 somatotropin NOT|involved_in ISO (PMID:9360546) BHF-UCL PMID:9360546 NCBI chrNW_004936541:4,524,397...4,528,234 JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:21,373,917...22,062,498
Ensembl chrNW_004936479:21,373,746...21,920,214 		JBrowse link
G Ntf3 neurotrophin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:2,163,510...2,223,429
Ensembl chrNW_004936709:2,163,334...2,223,552 		JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in ISO (MGI:5476876|PMID:23354168) CACAO PMID:23354168 MGI:5476876 NCBI chrNW_004936574:2,472,064...3,013,590
Ensembl chrNW_004936574:2,473,675...3,013,582 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Plk2 polo like kinase 2 ISO RGD PMID:20802490 RGD:152995511 NCBI chrNW_004936480:9,680,461...9,686,593
Ensembl chrNW_004936480:9,680,449...9,686,595 		JBrowse link
G Ptpn5 protein tyrosine phosphatase non-receptor type 5 ISO RGD PMID:19625523 RGD:9835004 NCBI chrNW_004936528:523,884...586,306
Ensembl chrNW_004936528:525,769...586,327 		JBrowse link
G Sele selectin E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:16,915,203...16,921,840
Ensembl chrNW_004936481:16,915,182...16,921,840 		JBrowse link
G Sfrp4 secreted frizzled related protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:13,257,183...13,266,972
Ensembl chrNW_004936478:13,257,801...13,266,701 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tbc1d5 TBC1 domain family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:9,868,657...10,294,554
Ensembl chrNW_004936473:9,868,430...10,188,484 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
G Wnt3a Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423 		JBrowse link
positive regulation of receptor-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 ISO RGD PMID:11717353 RGD:13452389 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791 		JBrowse link
G B2m beta-2-microglobulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:7,646,504...7,655,656
Ensembl chrNW_004936471:7,646,373...7,655,778 		JBrowse link
G Bicd1 BICD cargo adaptor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936607:3,893,350...4,126,813
Ensembl chrNW_004936607:3,895,634...4,126,880 		JBrowse link
G C3 complement C3 involved_in ISO (MGI:5905548|PMID:20199584)
(MGI:5319446|PMID:22438044)		 ARUK-UCL PMID:20199584 PMID:22438044 MGI:5319446 MGI:5905548 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G Cbl Cbl proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,136,389...4,235,746
Ensembl chrNW_004936542:4,136,511...4,228,288 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:2667257|PMID:12609829) BHF-UCL PMID:12609829 MGI:2667257 NCBI chrNW_004936524:2,765,271...2,767,259
Ensembl chrNW_004936524:2,765,267...2,767,385 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (MGI:2667257|PMID:12609829) BHF-UCL PMID:12609829 MGI:2667257 NCBI chrNW_004936524:2,787,963...2,789,116
Ensembl chrNW_004936524:2,788,341...2,789,016 		JBrowse link
G Clu clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836 		JBrowse link
G H1-1 H1.1 linker histone, cluster member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,876,497...1,878,006
Ensembl chrNW_004936671:1,877,303...1,877,959 		JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580 		JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,496,301...2,569,019
Ensembl chrNW_004936543:2,522,154...2,565,376 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of
involved_in		 ISO
IEA		 (PMID:20371611) BHF-UCL
Ensembl		 PMID:20371611 GO_REF:0000107 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720 		JBrowse link
G Kif3a kinesin family member 3A ISO RGD PMID:15181154 RGD:1581596 NCBI chrNW_004936647:2,461,017...2,502,550
Ensembl chrNW_004936647:2,461,138...2,501,871 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777 		JBrowse link
G LOC101970831 serotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394 		JBrowse link
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase ISO RGD PMID:21807099 RGD:152999022 NCBI chrNW_004936541:1,989,092...2,137,006
Ensembl chrNW_004936541:1,987,326...2,137,067 		JBrowse link
G Pld2 phospholipase D2 ISO RGD PMID:15470141 RGD:2299909 NCBI chrNW_004936677:2,870,664...2,883,545
Ensembl chrNW_004936677:2,870,660...2,883,567 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
G Rab21 RAB21, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:814,647...846,426
Ensembl chrNW_004936568:814,656...846,206 		JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123 		JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:4,815,222...5,015,250
Ensembl chrNW_004936591:4,817,184...5,016,140 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:15541315 RGD:2314546 NCBI chrNW_004936489:4,903,176...5,177,987 JBrowse link
G Synj1 synaptojanin 1 ISO RGD PMID:15821731 RGD:2312450 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
G Vtn vitronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,522,275...4,525,245
Ensembl chrNW_004936538:4,522,074...4,525,336 		JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,274,112...21,329,286
Ensembl chrNW_004936471:21,274,027...21,329,503 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777 		JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Mff mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936525:8,604,478...8,636,352
Ensembl chrNW_004936525:8,604,481...8,636,357 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chrNW_004936555:6,216,202...6,283,012
Ensembl chrNW_004936555:6,236,464...6,283,012 		JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chrNW_004936588:2,504,372...2,535,993
Ensembl chrNW_004936588:2,504,374...2,536,011 		JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
G Tor1a torsin family 1 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,012,661...17,020,657
Ensembl chrNW_004936487:17,011,670...17,020,699 		JBrowse link
positive regulation of ubiquitin-dependent endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970059 uncharacterized LOC101970059 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:752,572...809,127
Ensembl chrNW_004936528:752,694...808,888 		JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,829,207...7,833,213
Ensembl chrNW_004936470:7,830,114...7,833,047 		JBrowse link
postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISO (PMID:27568566) SynGO PMID:27568566 NCBI chrNW_004936521:5,023,896...5,050,822 JBrowse link
G Caly calcyon neuron specific vesicular protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,463,989...19,471,976
Ensembl chrNW_004936486:19,464,158...19,472,176 		JBrowse link
G Dnm3 dynamin 3 involved_in ISO PMID:17880892 SynGO PMID:17880892 RGD:8553820 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO PMID:25023288 SynGO PMID:25023288 RGD:13702241 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Myo6 myosin VI involved_in ISO (PMID:15657400) SynGO PMID:15657400 NCBI chrNW_004936788:1,125,332...1,264,372
Ensembl chrNW_004936788:1,174,544...1,262,746 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 involved_in ISO (PMID:25972173) SynGO PMID:25972173 NCBI chrNW_004936491:16,883,972...16,919,539
Ensembl chrNW_004936491:16,886,065...16,919,545 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO PMID:15629704 SynGO PMID:15629704 RGD:155230721 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Sh3glb2 SH3 domain containing GRB2 like, endophilin B2 involved_in ISO PMID:26776730 SynGO PMID:26776730 RGD:11564596 NCBI chrNW_004936487:16,463,705...16,474,699
Ensembl chrNW_004936487:16,463,666...16,474,969 		JBrowse link
G Synj1 synaptojanin 1 involved_in ISO (MGI:5819348|PMID:18987319) SynGO PMID:18987319 MGI:5819348 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
presynaptic endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,720,687...13,897,899
Ensembl chrNW_004936491:13,729,727...13,897,923 		JBrowse link
G Arfgap3 ADP ribosylation factor GTPase activating protein 3 involved_in ISO (PMID:24719103) SynGO PMID:24719103 NCBI chrNW_004936718:674,177...714,204
Ensembl chrNW_004936718:674,033...714,228 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:31628181) SynGO PMID:31628181 NCBI chrNW_004936488:17,580,425...17,588,480
Ensembl chrNW_004936488:17,580,454...17,588,507 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:31628181) SynGO PMID:31628181 NCBI chrNW_004936508:5,207,909...5,223,780
Ensembl chrNW_004936508:5,207,904...5,223,780 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:31628181) SynGO PMID:31628181 NCBI chrNW_004936664:471,446...480,858
Ensembl chrNW_004936664:471,440...480,441 		JBrowse link
G Necap1 NECAP endocytosis associated 1 involved_in ISO PMID:24130457 SynGO PMID:24130457 RGD:13432276 NCBI chrNW_004936892:372,743...385,127
Ensembl chrNW_004936892:372,284...385,202 		JBrowse link
prostaglandin receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:15937517 RGD:10043344 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase (Cartwright blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14645660) Ensembl
MGI		 PMID:14645660 GO_REF:0000107 NCBI chrNW_004936543:856,678...862,080
Ensembl chrNW_004936543:856,676...862,109 		JBrowse link
G Ackr3 atypical chemokine receptor 3 involved_in ISO (PMID:22300987), (PMID:22457824) UniProt PMID:22300987 PMID:22457824 NCBI chrNW_004936525:1,559,575...1,570,679 JBrowse link
G Adm adrenomedullin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Arrb2 arrestin beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Calca calcitonin related polypeptide alpha involved_in ISO (PMID:10882736) UniProt PMID:10882736 NCBI chrNW_004936528:3,800,801...3,806,000
Ensembl chrNW_004936528:3,800,577...3,805,004 		JBrowse link
G Calcrl calcitonin receptor like receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:10,191,789...10,292,355
Ensembl chrNW_004936506:10,249,687...10,292,424 		JBrowse link
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800 		JBrowse link
G Cd9 CD9 molecule involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004936709:1,497,504...1,530,114 JBrowse link
G Cltc clathrin heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Cxcr1 C-X-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:715,129...716,187
Ensembl chrNW_004936569:715,129...716,181 		JBrowse link
G Dnm1 dynamin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm2 dynamin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Dnm3 dynamin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Entrep1 endosomal transmembrane epsin interactor 1 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:34927784) UniProt
Ensembl		 PMID:34927784 GO_REF:0000107 NCBI chrNW_004936503:5,611,867...5,671,947
Ensembl chrNW_004936503:5,610,573...5,672,308 		JBrowse link
G Ezr ezrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16365167) Ensembl
MGI		 PMID:16365167 GO_REF:0000107 NCBI chrNW_004936489:10,413,374...10,457,771
Ensembl chrNW_004936489:10,412,710...10,458,201 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948 		JBrowse link
G Ghr growth hormone receptor involved_in
NOT|involved_in		 ISO (PMID:9360546) BHF-UCL PMID:9360546 NCBI chrNW_004936518:235,996...380,225
Ensembl chrNW_004936518:235,990...380,272 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 involved_in ISO PMID:11100149 UniProt PMID:11100149 RGD:8554168 NCBI chrNW_004936576:3,800,369...3,940,324
Ensembl chrNW_004936576:3,800,075...3,941,003 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,437,061...2,456,141
Ensembl chrNW_004936599:2,437,032...2,456,147 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:425,902...522,331
Ensembl chrNW_004936657:426,787...521,198 		JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,285,678...5,301,267
Ensembl chrNW_004936594:5,285,551...5,301,233 		JBrowse link
G Ins insulin acts_upstream_of_positive_effect ISO (PMID:17264162) MGI PMID:17264162 NCBI chrNW_004936816:1,002,137...1,003,357
Ensembl chrNW_004936816:1,002,137...1,003,357 		JBrowse link
G Insr insulin receptor involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:17264162) Ensembl
MGI		 PMID:17264162 GO_REF:0000107 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777 		JBrowse link
G LOC101956095 C-X-C chemokine receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:688,698...690,563
Ensembl chrNW_004936569:681,301...690,563 		JBrowse link
G LOC101964975 interleukin-8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353 		JBrowse link
G LOC101966195 huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071 		JBrowse link
G LOC120889510 insulin acts_upstream_of_positive_effect ISO (PMID:17264162) MGI PMID:17264162
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23931994) Ensembl
MGI		 PMID:23931994 GO_REF:0000107 NCBI chrNW_004936556:5,915,265...5,934,004
Ensembl chrNW_004936556:5,928,622...5,931,499 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:15937517 RGD:10043344 NCBI chrNW_004936591:1,174,364...1,250,233
Ensembl chrNW_004936591:1,174,069...1,249,410 		JBrowse link
G Rab31 RAB31, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:1,628,379...1,673,150
Ensembl chrNW_004936626:1,628,451...1,660,510 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Rala RAS like proto-oncogene A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:15,167,651...15,186,594
Ensembl chrNW_004936478:15,167,751...15,186,633 		JBrowse link
G Ralb RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:50,237,804...50,279,483
Ensembl chrNW_004936469:50,236,409...50,279,583 		JBrowse link
G Ramp1 receptor activity modifying protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936525:503,119...540,159
Ensembl chrNW_004936525:503,070...540,281 		JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:17,479,899...17,481,788
Ensembl chrNW_004936490:17,479,650...17,482,716 		JBrowse link
G Ramp3 receptor activity modifying protein 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:19,977,618...20,001,366
Ensembl chrNW_004936478:19,977,539...20,004,838 		JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,502,854...13,564,886
Ensembl chrNW_004936492:13,501,663...13,564,867 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Snx1 sorting nexin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:24,569,677...24,617,016
Ensembl chrNW_004936471:24,569,609...24,619,826 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tfrc transferrin receptor involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:17389358) MGI PMID:17389358 NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080 		JBrowse link
receptor-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Adrb3 adrenoceptor beta 3 NOT|involved_in ISO (PMID:15123695) HGNC-UCL PMID:15123695 NCBI chrNW_004936710:1,410,589...1,413,279
Ensembl chrNW_004936710:1,411,446...1,413,098 		JBrowse link
G Amn amnion associated transmembrane protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936835:961,840...970,287
Ensembl chrNW_004936835:961,826...970,234 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:1917954) BHF-UCL PMID:1917954 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Arhgap27 Rho GTPase activating protein 27 acts_upstream_of_or_within
involved_in		 ISO PMID:15147912 RGD
MGI
HGNC-UCL		 PMID:15147912 RGD:1302833 NCBI chrNW_004936541:1,650,704...1,685,357
Ensembl chrNW_004936541:1,650,413...1,683,824 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO RGD PMID:12511957 RGD:629531 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15004221) Ensembl
MGI		 PMID:15004221 GO_REF:0000107 NCBI chrNW_004936474:21,854,454...21,881,622
Ensembl chrNW_004936474:21,854,330...21,881,622 		JBrowse link
G Cd14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:26528478) MGI PMID:26528478 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Clec9a C-type lectin domain containing 9A involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936902:484,390...499,052
Ensembl chrNW_004936902:484,456...499,052 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Cltc clathrin heavy chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Cltcl1 clathrin heavy chain like 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:3,181,890...3,276,305
Ensembl chrNW_004936619:3,181,516...3,276,328 		JBrowse link
G Cttn cortactin involved_in ISO PMID:19995918 RGD
UniProt		 PMID:12612086 PMID:19995918 RGD:10047197 RGD:727733 NCBI chrNW_004936599:481,234...503,857
Ensembl chrNW_004936599:481,243...501,743 		JBrowse link
G Cubn cubilin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15616221) RGD
MGI
Ensembl		 PMID:11595644 PMID:15616221 GO_REF:0000107 RGD:628443 NCBI chrNW_004936520:10,140,784...10,410,082
Ensembl chrNW_004936520:10,140,784...10,409,851 		JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936677:3,157,173...3,162,599
Ensembl chrNW_004936677:3,157,144...3,163,210 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12413896) TreeGrafter
MGI		 PMID:12413896 GO_REF:0000118 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:5,768,229...5,883,841
Ensembl chrNW_004936529:5,785,538...5,883,097 		JBrowse link
G Dnm1 dynamin 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12011079 GO_REF:0000107 RGD:727371 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm2 dynamin 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:11925437 GO_REF:0000107 RGD:728683 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:16543144) CACAO PMID:16543144 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11911823) Ensembl
MGI		 PMID:11911823 GO_REF:0000107 NCBI chrNW_004936580:115,552...144,970
Ensembl chrNW_004936580:115,450...145,785 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (PMID:2142460) RGD
ARUK-UCL		 PMID:2142460 PMID:17680646 RGD:9588617 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Gak cyclin G associated kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,254,109...22,300,827
Ensembl chrNW_004936477:22,253,471...22,300,932 		JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10613908) Ensembl
MGI		 PMID:10613908 GO_REF:0000107 NCBI chrNW_004936558:1,778,862...1,804,071
Ensembl chrNW_004936558:1,778,888...1,791,610 		JBrowse link
G Hmmr hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:570,112...599,400
Ensembl chrNW_004936515:571,139...600,132 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 involved_in ISO (MGI:5897551|PMID:21289173) ARUK-UCL PMID:21289173 MGI:5897551 NCBI chrNW_004936474:7,407,622...7,478,950
Ensembl chrNW_004936474:7,408,518...7,467,851 		JBrowse link
G Insr insulin receptor involved_in ISO PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (MGI:5319446|PMID:22438044), (MGI:5905548|PMID:20199584) ARUK-UCL PMID:20199584 PMID:22438044 MGI:5319446 MGI:5905548 NCBI chrNW_004936543:8,460,526...8,508,524
Ensembl chrNW_004936543:8,461,307...8,508,524 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5905548|PMID:20199584) ARUK-UCL PMID:20199584 MGI:5905548 NCBI chrNW_004936778:1,286,475...1,311,184
Ensembl chrNW_004936778:1,286,341...1,311,194 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Ldlrad3 low density lipoprotein receptor class A domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21795536) Ensembl
MGI
TreeGrafter		 PMID:21795536 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936533:2,105,844...2,263,621
Ensembl chrNW_004936533:2,105,197...2,263,675 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777 		JBrowse link
G Lmbr1l limb development membrane protein 1 like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:6,892,798...6,910,576
Ensembl chrNW_004936512:6,892,801...6,910,576 		JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein involved_in ISO (PMID:19189310) UniProt PMID:19189310 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G LOC120883745 prolow-density lipoprotein receptor-related protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21795536) RGD
MGI
TreeGrafter
Ensembl		 PMID:18285446 PMID:21795536 GO_REF:0000107 GO_REF:0000118 RGD:13800558 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Lrp2 LDL receptor related protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10052453) RGD
MGI
TreeGrafter
Ensembl		 PMID:10052453 PMID:11595644 GO_REF:0000107 GO_REF:0000118 RGD:628443 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936562:2,211,519...2,262,899
Ensembl chrNW_004936562:2,211,514...2,263,937 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:7,788,560...7,802,821
Ensembl chrNW_004936528:7,788,352...7,802,902 		JBrowse link
G Marco macrophage receptor with collagenous structure involved_in ISO PMID:15987691 ARUK-UCL PMID:15987691 RGD:13432286 NCBI chrNW_004936469:51,323,746...51,366,551 JBrowse link
G Micall1 MICAL like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,200,754...3,227,983
Ensembl chrNW_004936492:3,204,969...3,226,559 		JBrowse link
G Mrc1 mannose receptor C-type 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:9,463,007...9,547,321
Ensembl chrNW_004936520:9,463,007...9,547,257 		JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936573:5,345,282...5,391,946
Ensembl chrNW_004936573:5,328,526...5,388,901 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004936762:435,729...458,261
Ensembl chrNW_004936762:435,729...458,423 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing NOT|involved_in ISO (PMID:14551253) UniProt PMID:14551253 NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078 		JBrowse link
G Pla2r1 phospholipase A2 receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:18,679,840...18,789,655
Ensembl chrNW_004936469:18,679,914...18,789,369 		JBrowse link
G Pld2 phospholipase D2 acts_upstream_of_or_within ISO (PMID:14718562) MGI PMID:14718562 NCBI chrNW_004936677:2,870,664...2,883,545
Ensembl chrNW_004936677:2,870,660...2,883,567 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16542649) MGI
TreeGrafter
Ensembl		 PMID:16542649 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16533754) Ensembl
MGI		 PMID:16533754 GO_REF:0000107 NCBI chrNW_004936543:7,405,070...7,447,940
Ensembl chrNW_004936543:7,404,944...7,447,173 		JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) UniProt PMID:26212330 NCBI chrNW_004936595:284,313...286,167
Ensembl chrNW_004936595:284,151...286,167 		JBrowse link
G Scarb2 scavenger receptor class B member 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936676:167,482...225,827
Ensembl chrNW_004936676:170,010...225,457 		JBrowse link
G Sdc1 syndecan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,177,804...11,199,678
Ensembl chrNW_004936493:11,177,708...11,199,804 		JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15113744 RGD:1581379 NCBI chrNW_004936815:963,715...999,280
Ensembl chrNW_004936815:963,715...999,280 		JBrowse link
G Snx17 sorting nexin 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12169628) Ensembl
MGI		 PMID:12169628 GO_REF:0000107 NCBI chrNW_004936493:5,207,134...5,212,957
Ensembl chrNW_004936493:5,204,846...5,212,957 		JBrowse link
G Snx9 sorting nexin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:9,736,255...9,804,841
Ensembl chrNW_004936489:9,736,242...9,804,874 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:6,192,407...6,352,835
Ensembl chrNW_004936542:6,192,407...6,352,424 		JBrowse link
G Stab2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,678,074...10,817,870
Ensembl chrNW_004936492:10,678,115...10,833,963 		JBrowse link
G Tfr2 transferrin receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:667,570...681,872
Ensembl chrNW_004936543:668,157...682,174 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:14729511 RGD:1579921 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430 		JBrowse link
G Tmem108 transmembrane protein 108 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,326,775...6,629,247
Ensembl chrNW_004936529:6,326,702...6,629,898 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502 		JBrowse link
G Wasf1 WASP family member 1 involved_in ISO (MGI:5825407|PMID:27605705) UniProt PMID:27605705 MGI:5825407 NCBI chrNW_004936564:6,036,135...6,096,046 JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:10,196,228...10,219,137
Ensembl chrNW_004936474:10,196,211...10,221,777 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18948618) TreeGrafter
MGI		 PMID:18948618 GO_REF:0000118 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Cav2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,553,932...2,561,186
Ensembl chrNW_004936589:2,552,477...2,561,569 		JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32855215) UniProt PMID:16081529 PMID:32855215 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Kiaa0319l KIAA0319 like acts_upstream_of_or_within ISO (PMID:26814968) MGI PMID:26814968 NCBI chrNW_004936474:18,002,864...18,110,000
Ensembl chrNW_004936474:18,003,930...18,106,273 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078 		JBrowse link
G Rnasek ribonuclease K involved_in ISO (PMID:26212330) UniProt PMID:26212330 NCBI chrNW_004936595:284,313...286,167
Ensembl chrNW_004936595:284,151...286,167 		JBrowse link
G Tpcn2 two pore segment channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,301,937...1,343,046
Ensembl chrNW_004936599:1,318,169...1,343,106 		JBrowse link
recognition of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcn3 ficolin 3 involved_in ISO (PMID:15804047) UniProt PMID:15804047 NCBI chrNW_004936474:11,680,166...11,685,214 JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14645847)
(PMID:10811223)		 Ensembl
MGI		 PMID:10811223 PMID:14645847 GO_REF:0000107 NCBI chrNW_004936594:1,760,924...1,771,022
Ensembl chrNW_004936594:1,760,853...1,770,765 		JBrowse link
G LOC101965964 ficolin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,421,092...2,428,240
Ensembl chrNW_004936669:2,421,087...2,431,714 		JBrowse link
G Megf10 multiple EGF like domains 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19915564) Ensembl
MGI		 PMID:19915564 GO_REF:0000107 NCBI chrNW_004936504:634,167...753,438
Ensembl chrNW_004936504:586,190...756,255 		JBrowse link
G Pear1 platelet endothelial aggregation receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19915564) Ensembl
MGI		 PMID:19915564 GO_REF:0000107 NCBI chrNW_004936580:6,030,426...6,052,330
Ensembl chrNW_004936580:6,040,482...6,051,239 		JBrowse link
G Scarb1 scavenger receptor class B member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgm2 transglutaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,178,244...3,207,551
Ensembl chrNW_004936561:3,178,293...3,207,561 		JBrowse link
regulation of caveolin-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
regulation of clathrin-dependent endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:13,720,687...13,897,899
Ensembl chrNW_004936491:13,729,727...13,897,923 		JBrowse link
G Ccdc32 coiled-coil domain containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,016,063...4,028,040
Ensembl chrNW_004936471:4,015,824...4,028,070 		JBrowse link
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20160091) Ensembl
MGI		 PMID:20160091 GO_REF:0000107 NCBI chrNW_004936692:2,788,477...2,836,094
Ensembl chrNW_004936692:2,741,632...2,834,078 		JBrowse link
G Gak cyclin G associated kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:22,254,109...22,300,827
Ensembl chrNW_004936477:22,253,471...22,300,932 		JBrowse link
G Prom2 prominin 2 NOT|involved_in ISO (PMID:23583380) UniProt PMID:23583380 NCBI chrNW_004936744:73,004...85,911 JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 ISO RGD PMID:15066995 RGD:13504745 NCBI chrNW_004936483:18,051,023...18,176,514
Ensembl chrNW_004936483:18,050,899...18,176,519 		JBrowse link
G Smap1 small ArfGAP 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15659652) Ensembl
MGI
TreeGrafter		 PMID:15659652 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936618:2,523,572...2,703,803
Ensembl chrNW_004936618:2,523,397...2,704,205 		JBrowse link
G Snap91 synaptosome associated protein 91 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16254249) MGI
Ensembl		 PMID:16254249 GO_REF:0000107 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
G Tnk2 tyrosine kinase non receptor 2 involved_in ISO (PMID:18262180) UniProt PMID:18262180 NCBI chrNW_004936784:636,105...685,080
Ensembl chrNW_004936784:636,139...685,210 		JBrowse link
G Ush1g USH1 protein network component sans involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:258,115...262,739
Ensembl chrNW_004936594:259,030...262,778 		JBrowse link
regulation of endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgap1 ADP ribosylation factor GTPase activating protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24792215) TreeGrafter
MGI		 PMID:24792215 GO_REF:0000118 NCBI chrNW_004936514:10,627,700...10,641,157
Ensembl chrNW_004936514:10,627,639...10,640,869 		JBrowse link
G Arhgap21 Rho GTPase activating protein 21 acts_upstream_of_or_within ISO (PMID:24792215) MGI PMID:24792215 NCBI chrNW_004936484:348,671...393,993
Ensembl chrNW_004936484:349,466...483,523 		JBrowse link
G Bin1 bridging integrator 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936469:44,128,308...44,185,739
Ensembl chrNW_004936469:44,127,970...44,185,246 		JBrowse link
G Cd177 CD177 molecule involved_in ISO (PMID:28807980) UniProt PMID:28807980 NCBI chrNW_004936706:630,098...637,775 JBrowse link
G Cd22 CD22 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:960,592...971,688
Ensembl chrNW_004936570:960,746...969,049 		JBrowse link
G Cdh13 cadherin 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:3,925,185...4,223,421
Ensembl chrNW_004936641:3,931,033...4,224,101 		JBrowse link
G Ehd4 EH domain containing 4 ISO RGD PMID:12011113 RGD:632501 NCBI chrNW_004936471:5,205,185...5,294,507
Ensembl chrNW_004936471:5,205,183...5,294,557 		JBrowse link
G Epn2 epsin 2 ISO RGD PMID:10567358 RGD:708327 NCBI chrNW_004936881:417,348...504,650
Ensembl chrNW_004936881:419,682...504,650 		JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:1,778,862...1,804,071
Ensembl chrNW_004936558:1,778,888...1,791,610 		JBrowse link
G LOC101967553 synaptojanin-2-binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11882656) Ensembl
MGI		 PMID:11882656 GO_REF:0000107 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914 		JBrowse link
G Ophn1 oligophrenin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19481455) Ensembl
MGI
TreeGrafter		 PMID:19481455 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408 		JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:24,574,106...24,622,494
Ensembl chrNW_004936476:24,571,877...24,622,707 		JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936718:739,133...850,775
Ensembl chrNW_004936718:739,133...801,662 		JBrowse link
G Pacsin3 protein kinase C and casein kinase substrate in neurons 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936562:1,988,839...1,995,597
Ensembl chrNW_004936562:1,989,662...1,995,580 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 involved_in ISO (PMID:21135139) UniProt PMID:21135139 NCBI chrNW_004936514:4,065,455...4,083,847
Ensembl chrNW_004936514:4,068,238...4,084,009 		JBrowse link
G Rab4a RAB4A, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11172003) UniProt
MGI
TreeGrafter
Ensembl		 PMID:11172003 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936484:20,281,495...20,301,906
Ensembl chrNW_004936484:20,281,435...20,301,391 		JBrowse link
G Rab4b RAB4B, member RAS oncogene family involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936661:3,049,802...3,059,921
Ensembl chrNW_004936661:3,049,638...3,059,963 		JBrowse link
G Rab5b RAB5B, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7789520) Ensembl
MGI		 PMID:7789520 GO_REF:0000107 NCBI chrNW_004936646:386,958...408,265
Ensembl chrNW_004936646:386,833...410,192 		JBrowse link
G Rab5c RAB5C, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:7789520) MGI PMID:7789520 NCBI chrNW_004936490:16,962,793...16,985,006
Ensembl chrNW_004936490:16,960,917...16,985,022 		JBrowse link
G Rit2 Ras like without CAAX 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,145,761...3,535,014
Ensembl chrNW_004936517:3,145,598...3,480,781 		JBrowse link
G Rufy1 RUN and FYVE domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11172003) Ensembl
MGI
TreeGrafter		 PMID:11172003 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936739:1,148,676...1,206,485
Ensembl chrNW_004936739:1,148,689...1,206,064 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in ISO PMID:18842885 BHF-UCL PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
G Snx12 sorting nexin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:523,641...534,646
Ensembl chrNW_004936762:523,564...542,757 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Ston1 stonin 1 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936508:4,068,102...4,116,166
Ensembl chrNW_004936508:4,065,711...4,116,652 		JBrowse link
G Ston2 stonin 2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936488:9,689,595...9,816,672
Ensembl chrNW_004936488:9,682,823...9,816,703 		JBrowse link
G Syt4 synaptotagmin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,035,840...3,044,065
Ensembl chrNW_004936517:3,035,521...3,047,964 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:10827137) MGI PMID:10827137 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363 		JBrowse link
G Vamp8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:18227281) MGI PMID:18227281 NCBI chrNW_004936712:1,688,126...1,689,742
Ensembl chrNW_004936712:1,688,093...1,689,816 		JBrowse link
regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,232,183...3,241,307
Ensembl chrNW_004936677:3,232,183...3,241,253 		JBrowse link
regulation of opsonization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4bpb complement component 4 binding protein beta involved_in ISO (PMID:22333221) BHF-UCL PMID:22333221 NCBI chrNW_004936557:5,546,692...5,561,531 JBrowse link
G LOC101973539 C4b-binding protein alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,511,372...5,535,158
Ensembl chrNW_004936557:5,511,320...5,542,713 		JBrowse link
regulation of phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr2a Fc fragment of IgG receptor IIa ISO RGD PMID:16482158 PMID:22184119 RGD:11041001 RGD:2293335 NCBI chrNW_004937131:15,542...22,099 JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,897,998...11,919,153
Ensembl chrNW_004936474:11,896,914...11,919,190 		JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:18,996,016...19,017,908
Ensembl chrNW_004936485:18,978,412...19,017,908 		JBrowse link
G Itgav integrin subunit alpha V involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:10,750,116...10,839,018
Ensembl chrNW_004936506:10,750,101...10,839,303 		JBrowse link
G Letmd1 LETM1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:8,684,597...8,694,074
Ensembl chrNW_004936512:8,684,587...8,694,074 		JBrowse link
G Prkcg protein kinase C gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15006698) Ensembl
MGI		 PMID:15006698 GO_REF:0000107 NCBI chrNW_004936994:87,525...105,125
Ensembl chrNW_004936994:87,519...105,134 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO RGD PMID:12016218 RGD:1304245 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:3690533|PMID:16982801) UniProt PMID:16982801 MGI:3690533 NCBI chrNW_004936581:1,516,199...1,557,992
Ensembl chrNW_004936581:1,512,855...1,559,679 		JBrowse link
regulation of postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in ISO PMID:19169250 SynGO PMID:19169250 RGD:2313185 NCBI chrNW_004936495:8,173,521...8,179,249
Ensembl chrNW_004936495:8,176,249...8,177,556 		JBrowse link
G Arc activity regulated cytoskeleton associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,185,145...9,188,260
Ensembl chrNW_004936470:9,185,145...9,186,320 		JBrowse link
G Atad1 ATPase family AAA domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:1,377,168...1,423,696
Ensembl chrNW_004936735:1,376,526...1,422,126 		JBrowse link
G Cblb Cbl proto-oncogene B involved_in ISO (PMID:32606037) SynGO PMID:32606037 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388 		JBrowse link
G Drd3 dopamine receptor D3 involved_in ISO PMID:16510729 SynGO PMID:16510729 RGD:13702467 NCBI chrNW_004936536:1,580,732...1,616,726
Ensembl chrNW_004936536:1,580,732...1,616,725 		JBrowse link
G Drd4 dopamine receptor D4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:468,334...471,254
Ensembl chrNW_004936888:468,403...471,205 		JBrowse link
G Efnb2 ephrin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:5,138,751...5,181,630
Ensembl chrNW_004936472:5,138,745...5,181,668 		JBrowse link
G Gsg1l GSG1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,332,597...11,444,732
Ensembl chrNW_004936501:11,332,390...11,444,787 		JBrowse link
G Hap1 huntingtin associated protein 1 involved_in ISO PMID:15310851 SynGO PMID:15310851 RGD:13702182 NCBI chrNW_004936490:16,645,116...16,652,310
Ensembl chrNW_004936490:16,643,520...16,652,479 		JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,496,301...2,569,019
Ensembl chrNW_004936543:2,522,154...2,565,376 		JBrowse link
G Hpca hippocalcin involved_in ISO PMID:20852624 SynGO PMID:20852624 RGD:13702412 NCBI chrNW_004936474:15,786,171...15,794,830
Ensembl chrNW_004936474:15,785,879...15,798,740 		JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 involved_in ISO (PMID:20547133) RGD
SynGO		 PMID:20547133 PMID:26884337 RGD:11560558 NCBI chrNW_004936898:318,564...425,785
Ensembl chrNW_004936898:337,400...425,859 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:2,822,789...2,871,069
Ensembl chrNW_004936541:2,815,738...2,871,035 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 involved_in ISO PMID:25996636 SynGO PMID:25996636 RGD:155230734 NCBI chrNW_004936559:2,187,791...2,331,587
Ensembl chrNW_004936559:2,259,420...2,332,806 		JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:23760271) SynGO PMID:23760271 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Ncdn neurochondrin involved_in ISO (PMID:34907024) SynGO PMID:34907024 NCBI chrNW_004936474:18,110,143...18,119,347
Ensembl chrNW_004936474:18,110,113...18,119,341 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO PMID:21148011 SynGO PMID:21148011 RGD:13702142 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO (PMID:28212375) SynGO PMID:28212375 NCBI chrNW_004936497:6,106,284...6,318,339
Ensembl chrNW_004936497:6,106,268...6,318,354 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:16221846) SynGO PMID:16221846 NCBI chrNW_004936766:1,104,841...1,306,368
Ensembl chrNW_004936766:1,104,728...1,305,972 		JBrowse link
G Numb NUMB endocytic adaptor protein involved_in ISO (PMID:26621723) SynGO PMID:26621723 NCBI chrNW_004936488:2,579,017...2,742,961 JBrowse link
G Ophn1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408 		JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in ISO PMID:16617342
PMID:23918399		 SynGO PMID:16617342 PMID:23918399 RGD:13702399 RGD:13702454 NCBI chrNW_004936476:24,574,106...24,622,494
Ensembl chrNW_004936476:24,571,877...24,622,707 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:28855251 SynGO PMID:28855251 RGD:13702248 NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (PMID:22243752) SynGO PMID:22243752 NCBI chrNW_004936588:2,070,873...2,088,144
Ensembl chrNW_004936588:2,068,952...2,091,956 		JBrowse link
G Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,623,931...12,654,463
Ensembl chrNW_004936491:12,623,349...12,654,502
Ensembl chrNW_004936491:12,623,349...12,654,502 		JBrowse link
G Rabep1 rabaptin, RAB GTPase binding effector protein 1 involved_in ISO (PMID:34564930) SynGO PMID:34564930 NCBI chrNW_004936677:2,417,676...2,481,587
Ensembl chrNW_004936677:2,417,679...2,512,868 		JBrowse link
G Rala RAS like proto-oncogene A involved_in ISO PMID:19823667 SynGO PMID:19823667 RGD:2324918 NCBI chrNW_004936478:15,167,651...15,186,594
Ensembl chrNW_004936478:15,167,751...15,186,633 		JBrowse link
G Rnf216 ring finger protein 216 involved_in ISO PMID:24945773 SynGO PMID:24945773 RGD:11553202 NCBI chrNW_004936765:452,755...592,358
Ensembl chrNW_004936765:473,025...589,681 		JBrowse link
G Rnf220 ring finger protein 220 involved_in ISO (PMID:36179027) SynGO PMID:36179027 NCBI chrNW_004936474:25,678,672...25,894,337
Ensembl chrNW_004936474:25,678,667...25,897,665 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chrNW_004936470:8,349,175...8,370,099
Ensembl chrNW_004936470:8,349,188...8,369,864 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO PMID:28793258 SynGO PMID:28793258 RGD:13702139 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Susd4 sushi domain containing 4 involved_in ISO (PMID:33661101) SynGO PMID:33661101 NCBI chrNW_004936526:488,604...615,265
Ensembl chrNW_004936526:485,348...615,265 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:24191017 RGD:13209020 NCBI chrNW_004936489:4,903,176...5,177,987 JBrowse link
G Synj1 synaptojanin 1 involved_in ISO (PMID:18987319) SynGO PMID:18987319 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
G Tamalin trafficking regulator and scaffold protein tamalin involved_in ISO (PMID:32376687) SynGO PMID:32376687 NCBI chrNW_004936512:9,458,549...9,467,350
Ensembl chrNW_004936512:9,458,444...9,467,351 		JBrowse link
G Tspan7 tetraspanin 7 involved_in ISO PMID:22445342 SynGO PMID:22445342 RGD:11068824 NCBI chrNW_004936502:5,416,454...5,538,870
Ensembl chrNW_004936502:5,416,454...5,538,905 		JBrowse link
G Usp46 ubiquitin specific peptidase 46 involved_in ISO PMID:26077708 SynGO PMID:26077708 RGD:11056935 NCBI chrNW_004936482:15,539,123...15,603,733
Ensembl chrNW_004936482:15,538,504...15,603,693 		JBrowse link
G Vac14 VAC14 component of PIKFYVE complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:22,842,333...22,944,680
Ensembl chrNW_004936475:22,842,248...22,944,690 		JBrowse link
regulation of receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP ribosylation factor 1 involved_in ISO PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chrNW_004936864:117,510...119,612 JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166 		JBrowse link
G Flot1 flotillin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071 		JBrowse link
G LOC101967553 synaptojanin-2-binding protein NOT|involved_in ISO (MGI:3623710|PMID:16648306) UniProt PMID:16648306 MGI:3623710 NCBI chrNW_004936495:13,446,325...13,510,495
Ensembl chrNW_004936495:13,444,726...13,471,914
Ensembl chrNW_004936495:13,444,726...13,471,914 		JBrowse link
G Mkln1 muskelin 1 involved_in ISO PMID:25579817 UniProt PMID:25579817 RGD:13702173 NCBI chrNW_004936579:3,982,296...4,150,071
Ensembl chrNW_004936579:3,982,296...4,150,063 		JBrowse link
G Napb NSF attachment protein beta involved_in ISO PMID:11931741 UniProt PMID:11931741 RGD:633462 NCBI chrNW_004936620:2,158,246...2,205,624
Ensembl chrNW_004936620:2,157,528...2,205,586 		JBrowse link
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase involved_in ISO PMID:11931741 UniProt PMID:11931741 RGD:633462 NCBI chrNW_004936541:1,989,092...2,137,006
Ensembl chrNW_004936541:1,987,326...2,137,067 		JBrowse link
G Rspo1 R-spondin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,826,808...19,846,453
Ensembl chrNW_004936474:19,827,669...19,842,726 		JBrowse link
regulation of receptor-mediated endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd2ap CD2 associated protein ISO RGD PMID:15001553 RGD:1302417 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843 		JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:20,234,582...20,250,756
Ensembl chrNW_004936477:20,234,533...20,250,751 		JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:15272003 RGD:1601478 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052 		JBrowse link
regulation of signal transduction by receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20472890) MGI
Ensembl		 PMID:20472890 GO_REF:0000107 NCBI chrNW_004936602:4,264,896...4,278,160
Ensembl chrNW_004936602:4,264,889...4,278,161 		JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chrNW_004936595:567,267...574,051
Ensembl chrNW_004936595:567,219...574,059 		JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,236,320...20,239,385
Ensembl chrNW_004936484:20,236,320...20,239,430 		JBrowse link
G Acta2 actin alpha 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:266,918...283,858
Ensembl chrNW_004936735:266,754...284,377 		JBrowse link
G Actb actin beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936765:667,107...670,627
Ensembl chrNW_004936765:667,053...670,672 		JBrowse link
G Actbl2 actin beta like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:10,524,713...10,526,021 JBrowse link
G Actc1 actin alpha cardiac muscle 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,092,700...1,098,256
Ensembl chrNW_004936673:1,092,717...1,100,331 		JBrowse link
G Actg1 actin gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,170,711...5,173,251
Ensembl chrNW_004936594:5,170,711...5,173,247 		JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:174,602...220,088
Ensembl chrNW_004936556:174,602...220,285 		JBrowse link
G Btbd9 BTB domain containing 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22536397) Ensembl
MGI		 PMID:22536397 GO_REF:0000107 NCBI chrNW_004936476:20,953,377...21,351,925
Ensembl chrNW_004936476:20,953,347...21,351,255 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936488:17,580,425...17,588,480
Ensembl chrNW_004936488:17,580,454...17,588,507 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936508:5,207,909...5,223,780
Ensembl chrNW_004936508:5,207,904...5,223,780 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936664:471,446...480,858
Ensembl chrNW_004936664:471,440...480,441 		JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule involved_in ISO (PMID:31043663) SynGO PMID:31043663 NCBI chrNW_004936505:9,971,393...10,032,238
Ensembl chrNW_004936505:9,971,118...10,032,238 		JBrowse link
G Dgkq diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,225,624...22,238,825
Ensembl chrNW_004936477:22,225,618...22,238,803 		JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 involved_in ISO (PMID:33508244) SynGO PMID:33508244 NCBI chrNW_004936889:185,349...203,847
Ensembl chrNW_004936889:192,129...202,519 		JBrowse link
G LOC101978301 uncharacterized LOC101978301 involved_in ISO (PMID:34269176) SynGO PMID:34269176 NCBI chrNW_004936558:3,418,664...3,421,693 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO PMID:19481455 SynGO PMID:19481455 RGD:155230799 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:29386384) SynGO PMID:29386384 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (PMID:15386003) SynGO PMID:15386003 NCBI chrNW_004936588:2,070,873...2,088,144
Ensembl chrNW_004936588:2,068,952...2,091,956 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:5,576,705...5,614,738
Ensembl chrNW_004936521:5,575,996...5,615,370 		JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chrNW_004936555:6,216,202...6,283,012
Ensembl chrNW_004936555:6,236,464...6,283,012 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:34269176) SynGO PMID:34269176 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:730,462...874,601
Ensembl chrNW_004936550:733,239...874,601 		JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chrNW_004936471:33,936,721...33,958,439
Ensembl chrNW_004936471:33,936,531...33,958,573
Ensembl chrNW_004936471:33,936,531...33,958,573 		JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chrNW_004936588:2,504,372...2,535,993
Ensembl chrNW_004936588:2,504,374...2,536,011 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chrNW_004936664:3,307,562...3,318,184
Ensembl chrNW_004936664:3,306,931...3,318,279 		JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
G Snx9 sorting nexin 9 involved_in ISO PMID:17681954 SynGO PMID:17681954 RGD:155230781 NCBI chrNW_004936489:9,736,255...9,804,841
Ensembl chrNW_004936489:9,736,242...9,804,874 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO PMID:14532108 SynGO PMID:14532108 RGD:155230716 NCBI chrNW_004936581:1,516,199...1,557,992
Ensembl chrNW_004936581:1,512,855...1,559,679 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 involved_in ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chrNW_004936481:15,480,865...15,515,851
Ensembl chrNW_004936481:15,480,879...15,516,945 		JBrowse link
sperm entry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11756548) Ensembl
MGI		 PMID:11756548 GO_REF:0000107 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517 		JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm3 dynamin 3 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amph amphiphysin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11879655) TreeGrafter
MGI		 PMID:11879655 GO_REF:0000118 NCBI chrNW_004936478:13,959,669...14,183,835
Ensembl chrNW_004936478:13,960,771...14,183,764 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO PMID:27534442 SynGO PMID:27534442 RGD:152025525 NCBI chrNW_004936475:21,983,248...22,063,133
Ensembl chrNW_004936475:21,983,248...22,063,181 		JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 involved_in ISO (PMID:35014951) SynGO PMID:35014951 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 involved_in ISO (PMID:35014951) SynGO PMID:35014951 NCBI chrNW_004936888:689,673...735,119
Ensembl chrNW_004936888:689,727...733,541 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,156...127,666
Ensembl chrNW_004936490:12,233...127,715 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,680,748...5,691,666
Ensembl chrNW_004936578:5,682,541...5,689,521 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in ISO (PMID:24133283) SynGO PMID:24133283 NCBI chrNW_004936483:17,301,969...17,336,962
Ensembl chrNW_004936483:17,298,291...17,337,578 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in ISO (PMID:15492041) SynGO PMID:15492041 NCBI chrNW_004936785:503,615...525,361
Ensembl chrNW_004936785:508,848...525,391 		JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in ISO PMID:26731518 SynGO PMID:26731518 RGD:11556875 NCBI chrNW_004936583:181,490...185,466
Ensembl chrNW_004936583:181,490...185,471 		JBrowse link
G Atp8a1 ATPase phospholipid transporting 8A1 involved_in ISO (PMID:37723322) SynGO PMID:37723322 NCBI chrNW_004936482:9,562,214...9,778,494
Ensembl chrNW_004936482:9,562,207...9,778,609 		JBrowse link
G Bin1 bridging integrator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:44,128,308...44,185,739
Ensembl chrNW_004936469:44,127,970...44,185,246 		JBrowse link
G Bltp1 bridge-like lipid transfer protein family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936662:1,329,646...1,526,610
Ensembl chrNW_004936662:1,330,446...1,526,633 		JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (PMID:29262337) SynGO PMID:29262337 NCBI chrNW_004936537:6,899,271...6,977,420
Ensembl chrNW_004936537:6,895,569...6,915,849 		JBrowse link
G Canx calnexin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:1,051,853...1,085,658
Ensembl chrNW_004936739:1,051,240...1,086,405 		JBrowse link
G Capn2 calpain 2 involved_in ISO (PMID:35318705) SynGO PMID:35318705 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO RGD PMID:12855954 RGD:1358501 NCBI chrNW_004936527:6,478,934...6,483,848
Ensembl chrNW_004936527:6,478,982...6,483,866 		JBrowse link
G Cel carboxyl ester lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:19,463,219...19,472,029
Ensembl chrNW_004936487:19,463,182...19,469,900 		JBrowse link
G Cltc clathrin heavy chain involved_in ISO PMID:16982422 SynGO PMID:16982422 RGD:13702168 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274 		JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,032,712...22,055,160
Ensembl chrNW_004936477:22,032,664...22,055,187 		JBrowse link
G Dennd1a DENN domain containing 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17182770) Ensembl
MGI		 PMID:17182770 GO_REF:0000107 NCBI chrNW_004936487:11,815,040...12,332,603
Ensembl chrNW_004936487:11,812,658...12,332,673 		JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (PMID:28231467) SynGO PMID:28231467 NCBI chrNW_004936504:12,548,452...12,645,236
Ensembl chrNW_004936504:12,548,452...12,643,399 		JBrowse link
G Dnm1 dynamin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423
Ensembl chrNW_004936607:3,576,392...3,632,554 		JBrowse link
G Dnm2 dynamin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188 		JBrowse link
G Dnm3 dynamin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 involved_in ISO (PMID:30692166) SynGO PMID:30692166 NCBI chrNW_004936596:4,142,951...4,241,719
Ensembl chrNW_004936596:4,142,895...4,247,976 		JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:3,455,172...3,565,507
Ensembl chrNW_004936549:3,455,172...3,565,558 		JBrowse link
G Grn granulin precursor ISO RGD PMID:21813674 RGD:5509044 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Itsn1 intersectin 1 involved_in ISO (PMID:18676989) SynGO PMID:18676989 NCBI chrNW_004936500:8,490,514...8,678,127
Ensembl chrNW_004936500:8,468,940...8,612,942 		JBrowse link
G LOC101968601 signal transducer CD24 acts_upstream_of_or_within ISO (PMID:16606832) MGI PMID:16606832 NCBI chrNW_004936491:16,706,745...16,707,010 JBrowse link
G Nlgn1 neuroligin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936595:692,340...704,650
Ensembl chrNW_004936595:692,334...704,602 		JBrowse link
G Nlgn3 neuroligin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936762:435,729...458,261
Ensembl chrNW_004936762:435,729...458,423 		JBrowse link
G Nlgn4x neuroligin 4 X-linked involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936644:1,616,704...1,782,377 JBrowse link
G Ophn1 oligophrenin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19481455) Ensembl
MGI
TreeGrafter		 PMID:19481455 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408 		JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:24,574,106...24,622,494
Ensembl chrNW_004936476:24,571,877...24,622,707 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chrNW_004936498:13,785,638...13,885,931
Ensembl chrNW_004936498:13,784,886...13,886,167 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in ISO (PMID:35318705) SynGO PMID:35318705 NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chrNW_004936497:9,039,552...9,176,182
Ensembl chrNW_004936497:9,039,546...9,098,039 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO PMID:20956291 SynGO PMID:20956291 RGD:155230772 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,349,175...8,370,099
Ensembl chrNW_004936470:8,349,188...8,369,864 		JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 involved_in ISO (PMID:31053155) SynGO PMID:31053155 NCBI chrNW_004936591:4,815,222...5,015,250
Ensembl chrNW_004936591:4,817,184...5,016,140 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chrNW_004936510:7,222,200...7,345,138
Ensembl chrNW_004936510:7,223,757...7,343,742 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Sncb synuclein beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936597:878,270...888,346
Ensembl chrNW_004936597:878,286...888,331 		JBrowse link
G Sncg synuclein gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936804:16,869...21,684
Ensembl chrNW_004936804:16,614...21,969 		JBrowse link
G Ston1 stonin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936508:4,068,102...4,116,166
Ensembl chrNW_004936508:4,065,711...4,116,652 		JBrowse link
G Ston2 stonin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936488:9,689,595...9,816,672
Ensembl chrNW_004936488:9,682,823...9,816,703 		JBrowse link
G Stx1a syntaxin 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,909,560...2,918,175
Ensembl chrNW_004936543:2,909,552...2,918,770 		JBrowse link
G Synj1 synaptojanin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18093523) Ensembl
MGI
TreeGrafter		 PMID:18093523 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
G Synj2 synaptojanin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:9,848,070...9,911,952
Ensembl chrNW_004936489:9,848,062...9,908,760 		JBrowse link
G Syp synaptophysin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:1,062,206...1,075,935
Ensembl chrNW_004936721:1,062,217...1,075,988 		JBrowse link
G Syt1 synaptotagmin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936698:65,210...575,538
Ensembl chrNW_004936698:377,179...575,802 		JBrowse link
G Syt15 synaptotagmin 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936601:5,292,516...5,301,871 JBrowse link
G Syt17 synaptotagmin 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936501:4,903,220...4,958,667
Ensembl chrNW_004936501:4,903,211...4,959,597 		JBrowse link
G Syt2 synaptotagmin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936567:1,941,651...1,984,422
Ensembl chrNW_004936567:1,941,639...1,984,428 		JBrowse link
G Syt5 synaptotagmin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936886:451,400...457,093
Ensembl chrNW_004936886:449,194...457,088 		JBrowse link
G Syt8 synaptotagmin 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936816:732,948...737,371
Ensembl chrNW_004936816:732,565...737,309 		JBrowse link
G Tbc1d24 TBC1 domain family member 24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30335140) Ensembl
MGI		 PMID:30335140 GO_REF:0000107 NCBI chrNW_004936694:1,556,717...1,582,019
Ensembl chrNW_004936694:1,556,244...1,569,201 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in ISO (MGI:3573806|PMID:15475946) UniProt PMID:15475946 MGI:3573806 NCBI chrNW_004936595:1,385,692...1,389,484
Ensembl chrNW_004936595:1,385,695...1,389,552 		JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936692:2,788,477...2,836,094
Ensembl chrNW_004936692:2,741,632...2,834,078 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:2,504,372...2,535,993
Ensembl chrNW_004936588:2,504,374...2,536,011 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:18,051,023...18,176,514
Ensembl chrNW_004936483:18,050,899...18,176,519 		JBrowse link
G Synj1 synaptojanin 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10535736)
(PMID:12481038)
(MGI:5300660|PMID:22099461), (PMID:10535736)		 SynGO
MGI		 PMID:10535736 PMID:12481038 PMID:22099461 MGI:5300660 NCBI chrNW_004936500:9,484,571...9,565,980
Ensembl chrNW_004936500:9,484,586...9,566,100 		JBrowse link
ubiquitin-dependent endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbl Cbl proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,136,389...4,235,746
Ensembl chrNW_004936542:4,136,511...4,228,288 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:15383614) MGI PMID:15383614 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,099,484...3,113,159
Ensembl chrNW_004936542:3,099,430...3,113,210 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,181,009...15,217,952
Ensembl chrNW_004936487:15,180,811...15,217,406 		JBrowse link
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28675177) Ensembl
MGI		 PMID:28675177 GO_REF:0000107 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328 		JBrowse link
G Neurl1b neuralized E3 ubiquitin protein ligase 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936609:2,742,466...2,767,010
Ensembl chrNW_004936609:2,745,099...2,783,571 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    cellular process 15001
      vesicle-mediated transport 1524
        endocytosis 673
          caveolin-mediated endocytosis + 12
          endocytosis involved in viral entry into host cell + 11
          endocytosis, site selection 0
          negative regulation of endocytosis + 65
          phagocytosis + 216
          pinocytosis + 24
          positive regulation of endocytosis + 182
          postsynaptic endocytosis + 48
          presynaptic endocytosis + 102
          receptor-mediated endocytosis + 277
          regulation of endocytosis + 334
          sperm entry 1
          ubiquitin-dependent endocytosis + 8
          vesicle scission involved in endocytosis + 0
Path 2
Term Annotations click to browse term
  biological_process 15871
    localization 5129
      establishment of localization 4439
        transport 4141
          vesicle-mediated transport 1524
            endocytosis 673
              caveolin-mediated endocytosis + 12
              endocytosis involved in viral entry into host cell + 11
              endocytosis, site selection 0
              negative regulation of endocytosis + 65
              phagocytosis + 216
              pinocytosis + 24
              positive regulation of endocytosis + 182
              postsynaptic endocytosis + 48
              presynaptic endocytosis + 102
              receptor-mediated endocytosis + 277
              regulation of endocytosis + 334
              sperm entry 1
              ubiquitin-dependent endocytosis + 8
              vesicle scission involved in endocytosis + 0
paths to the root