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ONTOLOGY REPORT - ANNOTATIONS


Term:intra-Golgi vesicle-mediated transport
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Accession:GO:0006891 term browser browse the term
Definition:The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
Synonyms:exact_synonym: intra-Golgi transport


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intra-Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07035818.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr12:23,463,157...23,469,319 JBrowse link
G AABR07071244.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:106,586,689...106,602,837 JBrowse link
G Cog1 component of oligomeric golgi complex 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:102,167,594...102,180,569
Ensembl chr10:102,167,771...102,180,569
JBrowse link
G Cog2 component of oligomeric golgi complex 2 involved_in IBA
ISO
PMID:21873635
(PMID:7962052)
RGD PMID:7962052, PMID:21873635 RGD:13792537 NCBI chr19:57,286,955...57,322,853
Ensembl chr19:57,286,985...57,319,329
JBrowse link
G Cog3 component of oligomeric golgi complex 3 involved_in ISO
IBA
(PMID:11929878)
PMID:21873635
RGD PMID:11929878, PMID:21873635 RGD:13792537 NCBI chr15:57,753,814...57,805,627
Ensembl chr15:57,755,189...57,805,184
JBrowse link
G Cog5 component of oligomeric golgi complex 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:50,953,868...51,230,860
Ensembl chr 6:50,954,631...51,230,701
JBrowse link
G Cog6 component of oligomeric golgi complex 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:142,197,566...142,235,054
Ensembl chr 2:142,196,754...142,235,066
JBrowse link
G Cog8 component of oligomeric golgi complex 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,246,656...39,257,406
Ensembl chr19:39,246,625...39,257,451
JBrowse link
G Copa COPI coat complex subunit alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:90,467,285...90,508,894
Ensembl chr13:90,467,265...90,508,932
JBrowse link
G Copb1 COPI coat complex subunit beta 1 involved_in IBA
IDA
PMID:21873635
PMID:1840503
GO_Central
UniProt
PMID:21873635, PMID:1840503 RGD:13792537, RGD:632446 NCBI chr 1:183,695,480...183,729,569
Ensembl chr 1:183,695,481...183,729,569
JBrowse link
G Copb2 COPI coat complex subunit beta 2 involved_in IBA
ISO
PMID:21873635
(PMID:8335000)
RGD PMID:8335000, PMID:21873635 RGD:13792537 NCBI chr 8:106,582,339...106,603,763 JBrowse link
G Cope COPI coat complex subunit epsilon involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:20,863,141...20,873,516
Ensembl chr16:20,863,141...20,873,521
JBrowse link
G Copg1 COPI coat complex subunit gamma 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,815,041...119,840,997
Ensembl chr 4:119,815,139...119,864,114
JBrowse link
G Copg2 COPI coat complex subunit gamma 2 involved_in ISO
IBA
IEA
(PMID:11056392)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:11056392, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:58,064,394...58,195,242
Ensembl chr 4:58,064,833...58,195,143
JBrowse link
G Copz1 COPI coat complex subunit zeta 1 involved_in ISO
IBA
(PMID:11056392)
PMID:21873635
RGD PMID:11056392, PMID:21873635 RGD:13792537 NCBI chr 7:144,900,050...144,926,299
Ensembl chr 7:144,899,534...144,926,350
JBrowse link
G Copz2 COPI coat complex subunit zeta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:84,718,824...84,731,880
Ensembl chr10:84,718,824...84,731,880
JBrowse link
G Gosr2 golgi SNAP receptor complex member 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:9349823)
PMID:21873635
UniProt
RGD
PMID:9349823, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:91,735,772...91,756,123
Ensembl chr10:91,736,780...91,756,081
JBrowse link
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,879,608...91,986,242
Ensembl chr10:91,878,633...92,008,082
JBrowse link
G Rab33b RAB33B, member RAS oncogene family involved_in ISO (PMID:20163571) RGD PMID:20163571 NCBI chr 2:140,541,619...140,552,220
Ensembl chr 2:140,541,619...140,552,220
JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,624,973...165,664,201
Ensembl chr 1:165,625,058...165,664,192
JBrowse link
G Rab6b RAB6B, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:111,600,375...111,668,817
Ensembl chr 8:111,600,532...111,668,808
JBrowse link
G Trappc10 trafficking protein particle complex subunit 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:11,168,298...11,228,634
Ensembl chr20:11,168,298...11,228,625
JBrowse link
G Trappc3 trafficking protein particle complex subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:144,281,720...144,295,306
Ensembl chr 5:144,281,614...144,295,331
JBrowse link
G Trappc3l trafficking protein particle complex subunit 3L involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:27,578,268...27,664,689
Ensembl chr20:27,592,379...27,664,595
JBrowse link
G Uso1 USO1 vesicle transport factor TAS RGD PMID:7831324 RGD:730003 NCBI chr14:17,371,451...17,436,948
Ensembl chr14:17,371,453...17,436,897
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:276,310,072...276,508,635
Ensembl chr 1:276,309,927...276,490,602
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:102,340,261...102,353,612
Ensembl chr 6:102,339,857...102,353,403
JBrowse link
inter-Golgi cisterna vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cog5 component of oligomeric golgi complex 5 acts_upstream_of_or_within ISO (PMID:9792665) RGD PMID:9792665 NCBI chr 6:50,953,868...51,230,860
Ensembl chr 6:50,954,631...51,230,701
JBrowse link
retrograde transport, vesicle recycling within Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cux1 cut-like homeobox 1 IMP RGD PMID:15718469 RGD:1599272 NCBI chr12:23,150,886...23,470,095
Ensembl chr12:23,151,180...23,445,074
JBrowse link
G Golga5 golgin A5 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:15718469, PMID:21873635 RGD:1599272, RGD:13792537 NCBI chr 6:126,350,572...126,378,735
Ensembl chr 6:126,353,223...126,378,610
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      vesicle-mediated transport 1672
        Golgi vesicle transport 283
          intra-Golgi vesicle-mediated transport 29
            cisternal progression 0
            inter-Golgi cisterna vesicle-mediated transport + 1
            retrograde transport, vesicle recycling within Golgi + 2
Path 2
Term Annotations click to browse term
  biological_process 19612
    localization 6449
      establishment of localization 4865
        transport 4700
          vesicle-mediated transport 1672
            Golgi vesicle transport 283
              intra-Golgi vesicle-mediated transport 29
                cisternal progression 0
                inter-Golgi cisterna vesicle-mediated transport + 1
                retrograde transport, vesicle recycling within Golgi + 2
paths to the root