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ONTOLOGY REPORT - ANNOTATIONS


Term:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
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Accession:GO:0006890 term browser browse the term
Definition:The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
Synonyms:exact_synonym: cis-Golgi to rough ER transport;   cis-Golgi to rough ER vesicle-mediated transport;   cis-Golgi to rough endoplasmic reticulum transport;   cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport;   retrograde transport, Golgi to ER;   retrograde transport, Golgi to endoplasmic reticulum;   retrograde vesicle-mediated transport, Golgi to ER
 alt_id: GO:0048220



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retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARCN1 archain 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
UniProt
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 9:45,863,772...45,897,525
Ensembl chr 9:45,863,559...45,897,613
JBrowse link
G ARF3 ADP ribosylation factor 3 involved_in ISO (PMID:24768165) WB PMID:24768165 NCBI chr 5:14,973,477...14,993,016
Ensembl chr 5:14,975,630...14,978,446
JBrowse link
G ARF4 ADP ribosylation factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,410,094...39,430,177
Ensembl chr13:39,409,376...39,430,129
JBrowse link
G ARF5 ADP ribosylation factor 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:20,695,706...20,698,635
Ensembl chr18:20,694,966...20,698,726
JBrowse link
G ATP9A ATPase phospholipid transporting 9A (putative) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:52,936,169...53,072,620
Ensembl chr17:52,938,725...53,072,379
JBrowse link
G ATP9B ATPase phospholipid transporting 9B (putative) involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:146,022,975...146,228,847
Ensembl chr 1:146,022,978...146,221,769
JBrowse link
G BICD2 BICD cargo adaptor 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 3:42,393,270...42,456,821
Ensembl chr 3:42,393,277...42,456,782
JBrowse link
G BNIP1 BCL2 interacting protein 1 involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr16:51,126,922...51,140,389
Ensembl chr16:51,126,926...51,140,394
JBrowse link
G COG3 component of oligomeric golgi complex 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:21,759,174...21,826,926
Ensembl chr11:21,759,180...21,826,913
JBrowse link
G COG4 component of oligomeric golgi complex 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:13,492,876...13,524,442
Ensembl chr 6:13,490,116...13,524,452
JBrowse link
G COG7 component of oligomeric golgi complex 7 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:22,740,424...22,826,589
Ensembl chr 3:22,740,436...22,826,585
JBrowse link
G COPA COPI coat complex subunit alpha involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:90,142,629...90,191,743
Ensembl chr 4:90,141,216...90,193,389
JBrowse link
G COPB2 COPI coat complex subunit beta 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:80,220,460...80,264,808
Ensembl chr13:80,218,989...80,264,762
JBrowse link
G COPE COPI coat complex subunit epsilon involved_in IEA InterPro
UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 2:58,930,929...58,948,466
Ensembl chr 2:58,930,931...58,948,469
JBrowse link
G COPZ1 COPI coat complex subunit zeta 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
InterPro
UniProt
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 5:19,522,567...19,542,373
Ensembl chr 5:19,522,613...19,542,372
JBrowse link
G COPZ2 COPI coat complex subunit zeta 2 involved_in IEA UniProt
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr12:24,280,662...24,292,828
Ensembl chr12:24,280,665...24,292,892
JBrowse link
G ERGIC1 endoplasmic reticulum-golgi intermediate compartment 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr16:51,283,763...51,403,513
Ensembl chr16:51,285,493...51,330,169
JBrowse link
G ERGIC2 ERGIC and golgi 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
Ensembl
GO_Central
Ensembl
PMID:21873635 GO_REF:0000104 GO_REF:0000107 NCBI chr 5:44,334,224...44,384,777
Ensembl chr 5:44,334,230...44,387,933
JBrowse link
G ERGIC3 ERGIC and golgi 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr17:38,884,830...38,899,140
Ensembl chr17:38,885,117...38,899,138
JBrowse link
G FKBP11 FKBP prolyl isomerase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,959,305...14,964,231
Ensembl chr 5:14,961,518...14,963,546
JBrowse link
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12047556) UniProt PMID:12047556 NCBI chr14:113,245,486...113,379,472
Ensembl chr14:113,245,502...113,379,471
JBrowse link
G GOLPH3L golgi phosphoprotein 3 like involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:98,470,463...98,510,635
Ensembl chr 4:98,470,463...98,510,633
JBrowse link
G HTT huntingtin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,795,401...53,803,620
Ensembl chr 6:53,794,972...53,803,554
JBrowse link
G KDELR2 KDEL endoplasmic reticulum protein retention receptor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:4,716,651...4,735,303
Ensembl chr 3:4,716,646...4,735,300
JBrowse link
G KDELR3 KDEL endoplasmic reticulum protein retention receptor 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:9,505,205...9,515,723
Ensembl chr 5:9,505,206...9,515,723
JBrowse link
G KIF1C kinesin family member 1C acts_upstream_of_or_within ISO (MGI:2157254|PMID:11784862) MGI PMID:11784862 MGI:2157254 NCBI chr12:51,899,762...51,924,465
Ensembl chr12:51,897,494...51,924,432
JBrowse link
G LMAN2 lectin, mannose binding 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:80,595,064...80,636,168
Ensembl chr 2:80,595,334...80,609,594
JBrowse link
G LOC100521239 coatomer subunit epsilon pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:89,460,049...89,461,604 JBrowse link
G LOC100525311 Golgi phosphoprotein 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:17,875,623...17,903,853 JBrowse link
G LOC110257335 Golgi phosphoprotein 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:18,367,264...18,416,496
Ensembl chr16:18,367,282...18,416,501
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:121,882,734...122,242,325
Ensembl chr 3:121,882,744...122,242,326
JBrowse link
G PITPNB phosphatidylinositol transfer protein beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,185,705...45,250,089
Ensembl chr14:45,185,451...45,250,084
JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:155,800,838...155,894,919
Ensembl chr 6:155,800,678...155,894,912
JBrowse link
G RAB6A RAB6A, member RAS oncogene family involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:8,137,901...8,199,212
Ensembl chr 9:8,137,672...8,199,079
JBrowse link
G RAB6B RAB6B, member RAS oncogene family involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:75,012,267...75,075,324
Ensembl chr13:75,012,268...75,075,239
JBrowse link
G RER1 retention in endoplasmic reticulum sorting receptor 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:64,301,139...64,311,526
Ensembl chr 6:64,301,199...64,311,783
JBrowse link
G RINT1 RAD50 interactor 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 9:105,392,853...105,430,198
Ensembl chr 9:105,392,864...105,430,160
JBrowse link
G SCFD1 sec1 family domain containing 1 involved_in ISO PMID:19536132 UniProt PMID:19536132 RGD:8554815 NCBI chr 7:68,694,579...68,851,055
Ensembl chr 7:68,712,773...68,851,008
JBrowse link
G SCYL1 SCY1 like pseudokinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:6,720,047...6,733,477
Ensembl chr 2:6,716,115...6,733,438
JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 4:100,880,843...100,900,942
Ensembl chr 4:100,880,937...100,905,993
JBrowse link
G SLC25A30 solute carrier family 25 member 30 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:21,848,242...21,872,781
Ensembl chr11:21,848,941...21,865,590
JBrowse link
G STX18 syntaxin 18 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:5,883,653...6,000,944
Ensembl chr 8:5,890,765...6,004,399
JBrowse link
G TMEM115 transmembrane protein 115 involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr13:32,837,662...32,842,922
Ensembl chr13:32,837,667...32,842,959
JBrowse link
G USE1 unconventional SNARE in the ER 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:60,450,424...60,454,070
Ensembl chr 2:60,450,425...60,454,800
JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,088,779...10,370,857
Ensembl chr 9:10,088,798...10,370,855
JBrowse link
regulation of retrograde vesicle-mediated transport, Golgi to ER term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BET1L Bet1 golgi vesicular membrane trafficking protein like involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:26,475...31,960
Ensembl chr 2:26,478...30,574
JBrowse link
G RAB33B RAB33B, member RAS oncogene family involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:87,545,106...87,570,545
Ensembl chr 8:87,545,116...87,570,545
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17430
    localization 5366
      establishment of localization 4707
        transport 4540
          vesicle-mediated transport 1563
            Golgi vesicle transport 291
              retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 48
                Golgi vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane 0
                endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane 0
                regulation of retrograde vesicle-mediated transport, Golgi to ER 2
                vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
paths to the root