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ONTOLOGY REPORT - ANNOTATIONS


Term:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
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Accession:GO:0006890 term browser browse the term
Definition:The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
Synonyms:exact_synonym: cis-Golgi to rough ER transport;   cis-Golgi to rough ER vesicle-mediated transport;   cis-Golgi to rough endoplasmic reticulum transport;   cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport;   retrograde transport, Golgi to ER;   retrograde transport, Golgi to endoplasmic reticulum;   retrograde vesicle-mediated transport, Golgi to ER
 alt_id: GO:0048220



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retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071244.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Arcn1 archain 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247
JBrowse link
G Arf3 ADP-ribosylation factor 3 involved_in ISO UniProtKB:P18085 (PMID:24768165) RGD PMID:24768165 NCBI chr 7:129,886,082...129,912,022
Ensembl chr 7:129,886,082...129,912,002
JBrowse link
G Arf4 ADP-ribosylation factor 4 involved_in ISO UniProtKB:P61204|UniProtKB:P84085 (PMID:24768165) RGD PMID:24768165 NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261
JBrowse link
G Arf5 ADP-ribosylation factor 5 involved_in ISO UniProtKB:P18085 (PMID:24768165) RGD PMID:24768165 NCBI chr 4:57,038,521...57,041,447
Ensembl chr 4:57,038,521...57,041,441
JBrowse link
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:157,360,354...157,467,628
Ensembl chr 3:157,360,359...157,467,818
JBrowse link
G Atp9b ATPase phospholipid transporting 9B (putative) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:74,176,863...74,368,993
Ensembl chr18:74,176,863...74,368,953
JBrowse link
G Bicd2 BICD cargo adaptor 2 involved_in IBA
ISO
PMID:21873635
(MGI:5810253|PMID:25962623)
(PMID:25962623)
RGD PMID:25962623 PMID:21873635 MGI:5810253, RGD:13792537 NCBI chr17:15,259,773...15,304,889
Ensembl chr17:15,259,773...15,304,889
JBrowse link
G Bnip1 BCL2 interacting protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:16,386,876...16,399,124
Ensembl chr10:16,386,841...16,399,157
JBrowse link
G Cog3 component of oligomeric golgi complex 3 involved_in ISO (PMID:16420527) RGD PMID:16420527 NCBI chr15:51,020,808...51,071,288
Ensembl chr15:51,020,813...51,070,570
JBrowse link
G Cog4 component of oligomeric golgi complex 4 involved_in IBA
ISO
PMID:21873635
(PMID:19536132)
RGD PMID:19536132 PMID:21873635 RGD:13792537 NCBI chr19:38,820,478...38,854,803
Ensembl chr19:38,820,501...38,854,796
JBrowse link
G Cog7 component of oligomeric golgi complex 7 involved_in IBA
ISO
PMID:21873635
(PMID:16420527), (PMID:16510524)
RGD PMID:16420527 PMID:16510524 PMID:21873635 RGD:13792537 NCBI chr 1:176,489,795...176,549,455
Ensembl chr 1:176,489,791...176,549,455
JBrowse link
G Copa COPI coat complex subunit alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:84,546,483...84,586,879
Ensembl chr13:84,545,943...84,586,874
JBrowse link
G Copb1 COPI coat complex subunit beta 1 involved_in TAS PMID:11030615 UniProt PMID:11030615 RGD:8554029 NCBI chr 1:168,404,334...168,438,589
Ensembl chr 1:168,404,335...168,438,416
JBrowse link
G Copb2 COPI coat complex subunit beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:99,161,324...99,183,452 JBrowse link
G Cope COPI coat complex subunit epsilon involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr16:19,114,871...19,125,527
Ensembl chr16:19,114,871...19,128,907
JBrowse link
G Copz1 COPI coat complex subunit zeta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:134,409,523...134,435,661
Ensembl chr 7:134,409,799...134,435,662
JBrowse link
G Copz2 COPI coat complex subunit zeta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:81,832,441...81,845,514
Ensembl chr10:81,832,418...81,845,514
JBrowse link
G Dnajc28 DnaJ heat shock protein family (Hsp40) member C28 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:30,855,566...30,858,386
Ensembl chr11:30,853,526...30,858,441
JBrowse link
G Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:16,531,192...16,627,183
Ensembl chr10:16,531,194...16,626,957
JBrowse link
G Ergic2 ERGIC and golgi 2 involved_in ISO
IBA
(PMID:24768165)
PMID:21873635
RGD PMID:24768165 PMID:21873635 RGD:13792537 NCBI chr 4:181,092,025...181,123,060
Ensembl chr 4:181,090,808...181,123,060
JBrowse link
G Ergic3 ERGIC and golgi 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,525,059...144,534,813
Ensembl chr 3:144,525,092...144,534,813
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:12047556) RGD PMID:12047556 NCBI chr 1:245,018,535...245,147,052
Ensembl chr 1:245,018,568...245,147,042
JBrowse link
G Golph3 golgi phosphoprotein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:61,348,030...61,376,051
Ensembl chr 2:61,348,030...61,376,049
JBrowse link
G Golph3l golgi phosphoprotein 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,151,941...183,183,094
Ensembl chr 2:183,153,301...183,183,083
JBrowse link
G Htt huntingtin involved_in ISO
IEA
(PMID:20515468)
GO_REF:0000107
RGD
Ensembl
PMID:20515468 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:18086916), (PMID:8392934)
UniProt
RGD
PMID:8392934 PMID:18086916 GO_REF:0000024 NCBI chr 1:96,347,258...96,358,145
Ensembl chr 1:96,347,150...96,358,157
JBrowse link
G Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 involved_in ISO
ISS
(PMID:1325562), (PMID:18086916)
GO_REF:0000024
RGD
UniProt
PMID:1325562 PMID:18086916 GO_REF:0000024 NCBI chr12:11,138,820...11,157,117
Ensembl chr12:11,138,820...11,157,153
JBrowse link
G Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 involved_in ISO (PMID:18086916) RGD PMID:18086916 NCBI chr 7:111,079,236...111,089,463
Ensembl chr 7:111,079,218...111,101,600
JBrowse link
G Kif1c kinesin family member 1C acts_upstream_of_or_within ISO (MGI:2157254|PMID:11784862) RGD PMID:11784862 MGI:2157254 NCBI chr10:55,414,412...55,444,587
Ensembl chr10:55,415,900...55,443,545
JBrowse link
G Lman2 lectin, mannose-binding 2 involved_in ISO (PMID:20477988) RGD PMID:20477988 NCBI chr17:9,269,236...9,286,923
Ensembl chr17:9,269,022...9,287,265
JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO
IBA
(PMID:19369418)
PMID:21873635
RGD PMID:19369418 PMID:21873635 RGD:13792537 NCBI chr 6:36,048,357...36,353,206
Ensembl chr 6:36,048,191...36,352,984
JBrowse link
G Pitpnb phosphatidylinositol transfer protein, beta involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20332109)
UniProt
Ensembl
RGD
PMID:20332109 GO_REF:0000024 GO_REF:0000107 NCBI chr12:45,249,308...45,298,388
Ensembl chr12:45,249,333...45,298,314
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:23591818)
UniProt
RGD
PMID:23591818 GO_REF:0000024 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205
JBrowse link
G Rab6a RAB6A, member RAS oncogene family involved_in ISO
IEA
ISS
IBA
(PMID:25962623)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:25962623 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 1:154,957,870...155,008,922
Ensembl chr 1:154,958,189...154,996,715
JBrowse link
G Rab6b RAB6B, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:103,695,328...103,764,023
Ensembl chr 8:103,695,631...103,805,732
JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 involved_in IBA
ISO
PMID:21873635
(PMID:9309388)
RGD PMID:9309388 PMID:21873635 RGD:13792537 NCBI chr 5:165,634,567...165,646,643
Ensembl chr 5:165,634,300...165,646,750
JBrowse link
G Rint1 RAD50 interactor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:11,319,416...11,355,773
Ensembl chr 4:11,320,955...11,355,736
JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in IMP PMID:19536132 UniProt PMID:19536132 RGD:8554815 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Scyl1 SCY1 like pseudokinase 1 involved_in ISO
ISS
(PMID:18556652)
GO_REF:0000024
RGD
UniProt
PMID:18556652 GO_REF:0000024 NCBI chr 1:203,045,776...203,059,550
Ensembl chr 1:203,045,741...203,059,533
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
JBrowse link
G Stx18 syntaxin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:72,670,683...72,761,423
Ensembl chr14:72,670,411...72,761,464
JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
G Tmem115 transmembrane protein 115 involved_in ISO
IBA
(PMID:24806965)
PMID:21873635
RGD PMID:24806965 PMID:21873635 RGD:13792537 NCBI chr 8:108,207,463...108,212,327
Ensembl chr 8:108,207,654...108,212,298
JBrowse link
G Use1 unconventional SNARE in the ER 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,038,284...18,041,826
Ensembl chr16:18,039,173...18,041,826
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:24056303) RGD PMID:24056303 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
regulation of retrograde vesicle-mediated transport, Golgi to ER term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bet1l Bet1 golgi vesicular membrane trafficking protein-like involved_in ISO
IBA
(PMID:17389686)
PMID:21873635
RGD PMID:17389686 PMID:21873635 RGD:13792537 NCBI chr 1:195,930,165...195,935,072
Ensembl chr 1:195,931,411...195,935,040
JBrowse link
G Rab33b RAB33B, member RAS oncogene family involved_in ISO (PMID:20163571) RGD PMID:20163571 NCBI chr 2:135,528,116...135,538,719
Ensembl chr 2:135,528,116...135,538,719
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    cellular process 18252
      vesicle-mediated transport 1667
        Golgi vesicle transport 285
          retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 48
            Golgi vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane 0
            endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane 0
            regulation of retrograde vesicle-mediated transport, Golgi to ER 2
            vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
Path 2
Term Annotations click to browse term
  biological_process 19390
    localization 6437
      establishment of localization 4853
        transport 4689
          vesicle-mediated transport 1667
            Golgi vesicle transport 285
              retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 48
                Golgi vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane 0
                endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane 0
                regulation of retrograde vesicle-mediated transport, Golgi to ER 2
                vesicle targeting, cis-Golgi to rough endoplasmic reticulum + 0
paths to the root