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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum to Golgi vesicle-mediated transport
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Accession:GO:0006888 term browser browse the term
Definition:The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
Synonyms:exact_synonym: ER to Golgi transport;   ER to Golgi vesicle-mediated transport;   anterograde transport, ER to Golgi;   anterograde transport, endoplasmic reticulum to Golgi;   anterograde vesicle-mediated transport, ER to Golgi;   anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi;   endoplasmic reticulum to Golgi transport;   rough ER to cis-Golgi transport;   rough ER to cis-Golgi vesicle-mediated transport;   rough endoplasmic reticulum to cis-Golgi transport;   rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport
 alt_id: GO:0048221



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endoplasmic reticulum to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064415.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07071244.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ank1 ankyrin 1 involved_in ISO (PMID:18768923) RGD PMID:18768923 NCBI chr16:68,876,294...69,054,812
Ensembl chr16:68,877,504...69,054,759
JBrowse link
G Arcn1 archain 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247
JBrowse link
G Atl2 atlastin GTPase 2 NOT|involved_in ISO (PMID:18270207) RGD PMID:18270207 NCBI chr 6:15,139,071...15,180,421
Ensembl chr 6:15,139,044...15,180,421
JBrowse link
G Atl3 atlastin GTPase 3 NOT|involved_in ISO (PMID:18270207) RGD PMID:18270207 NCBI chr 1:204,680,958...204,727,360
Ensembl chr 1:204,680,968...204,723,354
JBrowse link
G Bcap29 B-cell receptor-associated protein 29 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1350933 (MGI:3044858|PMID:15187134)
RGD PMID:15187134 PMID:21873635 MGI:3044858, RGD:13792537 NCBI chr 6:48,182,702...48,222,698
Ensembl chr 6:48,182,706...48,222,720
JBrowse link
G Bcap31 B-cell receptor-associated protein 31 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:101917 (MGI:3044858|PMID:15187134)
RGD PMID:15187134 PMID:21873635 MGI:3044858, RGD:13792537 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506
JBrowse link
G Bet1 Bet1 golgi vesicular membrane trafficking protein acts_upstream_of_or_within
involved_in
IDA
IBA
PMID:15728249
PMID:21873635
RGD
MGI
GO_Central
PMID:16735505 PMID:15728249 PMID:21873635 RGD:4892613, RGD:8554056, RGD:13792537 NCBI chr 4:32,116,232...32,126,592
Ensembl chr 4:32,116,235...32,126,617
JBrowse link
G Cnih4 cornichon family AMPA receptor auxiliary protein 4 involved_in ISO
IBA
(PMID:24405750)
PMID:21873635
RGD PMID:24405750 PMID:21873635 RGD:13792537 NCBI chr13:92,910,315...92,926,428
Ensembl chr13:92,910,315...92,927,853
JBrowse link
G Cog3 component of oligomeric golgi complex 3 involved_in ISO (PMID:11929878) RGD PMID:11929878 NCBI chr15:51,020,808...51,071,288
Ensembl chr15:51,020,813...51,070,570
JBrowse link
G Copa COPI coat complex subunit alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:84,546,483...84,586,879
Ensembl chr13:84,545,943...84,586,874
JBrowse link
G Copb1 COPI coat complex subunit beta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:168,404,334...168,438,589
Ensembl chr 1:168,404,335...168,438,416
JBrowse link
G Copb2 COPI coat complex subunit beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:99,161,324...99,183,452 JBrowse link
G Cope COPI coat complex subunit epsilon involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,114,871...19,125,527
Ensembl chr16:19,114,871...19,128,907
JBrowse link
G Copg1 COPI coat complex subunit gamma 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,366,540...120,392,502 JBrowse link
G Copg2 COPI coat complex subunit gamma 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:59,366,086...59,501,591
Ensembl chr 4:59,366,086...59,501,618
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 involved_in ISO (MGI:4438315|PMID:19767744) RGD PMID:19767744 MGI:4438315 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Cul3 cullin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:22358839)
UniProt
RGD
PMID:22358839 GO_REF:0000024 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 involved_in IBA
ISO
PMID:21873635
(PMID:15308636)
RGD PMID:15308636 PMID:21873635 RGD:13792537 NCBI chr10:16,531,192...16,627,183
Ensembl chr10:16,531,194...16,626,957
JBrowse link
G Ergic2 ERGIC and golgi 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:181,092,025...181,123,060
Ensembl chr 4:181,090,808...181,123,060
JBrowse link
G Ergic3 ERGIC and golgi 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:144,525,059...144,534,813
Ensembl chr 3:144,525,092...144,534,813
JBrowse link
G Golga2 golgin A2 involved_in IDA PMID:11035033
PMID:10679020
UniProt PMID:11035033 PMID:10679020 RGD:10400877, RGD:10400863 NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
JBrowse link
G Gosr1 golgi SNAP receptor complex member 1 acts_upstream_of_or_within
involved_in
IDA
IBA
PMID:15728249
PMID:21873635
RGD
MGI
GO_Central
PMID:8638159 PMID:15728249 PMID:21873635 RGD:70749, RGD:8554056, RGD:13792537 NCBI chr10:61,570,499...61,607,287
Ensembl chr10:61,450,494...61,607,177
Ensembl chr10:61,450,494...61,607,177
JBrowse link
G Gosr2 golgi SNAP receptor complex member 2 NOT|involved_in ISO (PMID:9349823) RGD PMID:9349823 NCBI chr10:88,585,291...88,605,642
Ensembl chr10:88,586,299...88,605,625
JBrowse link
G Hdhd2 haloacid dehalogenase-like hydrolase domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:70,475,037...70,526,471
Ensembl chr18:70,474,926...70,526,470
JBrowse link
G Hint1-ps1 histidine triad nucleotide binding protein 1, pseudogene 1 IMP RGD PMID:12871960 RGD:724652 NCBI chr 4:92,100,994...92,101,568 JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (MGI:3619161|PMID:11092755) RGD PMID:11092755 MGI:3619161 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in ISO
IEA
(PMID:10837345)
GO_REF:0000107
RGD
Ensembl
PMID:10837345 GO_REF:0000107 NCBI chr 8:44,706,073...44,718,189
Ensembl chr 8:44,706,263...44,718,186
JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,347,258...96,358,145
Ensembl chr 1:96,347,150...96,358,157
JBrowse link
G Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,138,820...11,157,117
Ensembl chr12:11,138,820...11,157,153
JBrowse link
G Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,079,236...111,089,463
Ensembl chr 7:111,079,218...111,101,600
JBrowse link
G Klhl12 kelch-like family member 12 involved_in ISO
ISS
(PMID:22358839), (PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:22358839 PMID:27716508 GO_REF:0000024 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
JBrowse link
G Lman1 lectin, mannose-binding, 1 involved_in TAS
IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro
RGD
PMID:12517452 PMID:21873635 GO_REF:0000002, RGD:1549454, RGD:13792537 NCBI chr18:59,508,996...59,530,873
Ensembl chr18:59,508,996...59,530,851
JBrowse link
G Lman1l lectin, mannose-binding, 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,010,839...58,029,599
Ensembl chr 8:58,010,839...58,023,681
JBrowse link
G Lman2 lectin, mannose-binding 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,269,236...9,286,923
Ensembl chr17:9,269,022...9,287,265
JBrowse link
G Lman2l lectin, mannose-binding 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,683,174...38,685,249
Ensembl chr 9:38,661,712...38,685,337
JBrowse link
G Lmf1 lipase maturation factor 1 acts_upstream_of_or_within ISO MGI:1856820 (MGI:59214|PMID:2211673), (MGI:82166|PMID:8694753) RGD PMID:2211673 PMID:8694753 MGI:59214 MGI:82166 NCBI chr10:14,597,726...14,684,071
Ensembl chr10:14,597,594...14,684,119
JBrowse link
G Mia2 MIA SH3 domain ER export factor 2 involved_in IBA
ISO
PMID:21873635
(PMID:27138255)
(PMID:27170179)
RGD PMID:27138255 PMID:27170179 PMID:21873635 RGD:13792537 NCBI chr 6:76,787,508...76,885,246
Ensembl chr 6:76,787,508...76,885,211
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in IBA
ISO
PMID:21873635
(PMID:27138255)
RGD PMID:27138255 PMID:21873635 RGD:13792537 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553
JBrowse link
G Nrbp1 nuclear receptor binding protein 1 involved_in ISO
IBA
(PMID:11956649)
PMID:21873635
RGD PMID:11956649 PMID:21873635 RGD:13792537 NCBI chr 6:25,122,635...25,133,209
Ensembl chr 6:25,122,635...25,133,182
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:107,798,642...107,805,230
Ensembl chr 7:107,799,497...107,805,230
JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:27716508), (PMID:27813252)
UniProt
RGD
PMID:27716508 PMID:27813252 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Preb prolactin regulatory element binding involved_in IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in
acts_upstream_of_or_within
ISO
IDA
UniProtKB:Q9H0U4 (PMID:17684057), (PMID:21680502), (PMID:22939626)
PMID:15728249
RGD PMID:17684057 PMID:21680502 PMID:22939626 PMID:15728249 RGD:8554056 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in ISO
IEA
UniProtKB:P62820 (PMID:21680502)
GO_REF:0000107
RGD
Ensembl
PMID:21680502 GO_REF:0000107 NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
JBrowse link
G Rab29 RAB29, member RAS oncogene family NOT|involved_in ISO (PMID:24788816) RGD PMID:24788816 NCBI chr13:43,307,757...43,313,420
Ensembl chr13:43,307,775...43,313,417
JBrowse link
G Rab2a RAB2A, member RAS oncogene family NOT|involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 5:21,676,219...21,738,833
Ensembl chr 5:21,676,129...21,739,899
JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:23420830) RGD PMID:23420830 NCBI chr10:53,677,467...53,678,880
Ensembl chr10:53,677,467...53,678,840
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,024,443...36,054,067
Ensembl chr10:36,024,382...36,054,066
JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:8663406 PMID:21873635 RGD:633773, RGD:13792537 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component acts_upstream_of_or_within IDA PMID:15728249 MGI PMID:15728249 RGD:8554056 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:22355596) RGD PMID:22355596 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in ISS
ISO
GO_REF:0000024
(PMID:21478858)
UniProt
RGD
PMID:21478858 GO_REF:0000024 NCBI chr13:69,665,757...69,727,199
Ensembl chr13:69,684,291...69,727,196
JBrowse link
G Sec22a SEC22 homolog A, vesicle trafficking protein IDA RGD PMID:8621431 RGD:69776 NCBI chr11:65,402,583...65,462,329
Ensembl chr11:65,402,684...65,462,319
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
JBrowse link
G Sec22c SEC22 homolog C, vesicle trafficking protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:121,345,839...121,371,509
Ensembl chr 8:121,350,107...121,370,925
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component involved_in ISO (PMID:20427317) RGD PMID:20427317 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component involved_in ISO (PMID:20427317) RGD PMID:20427317 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component involved_in ISO (PMID:20427317) RGD PMID:20427317 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component involved_in ISO (PMID:20427317) RGD PMID:20427317 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273
JBrowse link
G Spast spastin involved_in ISO
ISS
IEA
(PMID:19000169)
GO_REF:0000024
GO_REF:0000104
RGD
UniProt
PMID:19000169 GO_REF:0000024 GO_REF:0000104 NCBI chr 6:21,055,349...21,106,586
Ensembl chr 6:21,055,349...21,107,954
JBrowse link
G Steep1 STING1 ER exit protein 1 involved_in ISO (PMID:32690950) RGD PMID:32690950 NCBI chr  X:116,087,626...116,114,159
Ensembl chr  X:116,060,929...116,114,159
JBrowse link
G Stx17 syntaxin 17 involved_in ISO
ISS
(PMID:21545355)
GO_REF:0000024
RGD
UniProt
PMID:21545355 GO_REF:0000024 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451
JBrowse link
G Stx5 syntaxin 5 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16735505 PMID:21873635 RGD:4892613, RGD:13792537 NCBI chr 1:205,637,401...205,653,563
Ensembl chr 1:205,637,413...205,653,563
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in IBA
ISO
PMID:21873635
(PMID:21680502)
RGD PMID:21680502 PMID:21873635 RGD:13792537 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
JBrowse link
G Tex261 testis expressed 261 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:116,253,547...116,260,730
Ensembl chr 4:116,244,600...116,260,253
JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IBA
ISO
PMID:21873635
(PMID:21478858), (PMID:27813252)
RGD PMID:21478858 PMID:27813252 PMID:21873635 RGD:13792537 NCBI chr11:43,885,542...43,911,976
Ensembl chr11:43,885,661...43,911,976
JBrowse link
G Ticam2 toll-like receptor adaptor molecule 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
JBrowse link
G Tmed1 transmembrane p24 trafficking protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:20,059,937...20,063,567
Ensembl chr 8:20,059,892...20,063,677
JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
G Tmed11 transmembrane emp24 protein transport domain containing 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:926,983...947,574
Ensembl chr14:927,001...947,321
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:32,052,542...32,061,596
Ensembl chr12:32,052,543...32,071,903
JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:90,241,516...90,249,429
Ensembl chr 8:90,241,516...90,249,346
JBrowse link
G Tmed4 transmembrane p24 trafficking protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:81,125,049...81,129,665
Ensembl chr14:81,125,053...81,129,631
JBrowse link
G Tmed5 transmembrane p24 trafficking protein 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,607,895...1,619,028
Ensembl chr14:1,607,819...1,628,426
JBrowse link
G Tmed6 transmembrane p24 trafficking protein 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:34,966,813...34,972,900
Ensembl chr19:34,966,813...34,972,900
JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:39,318,564...39,325,640
Ensembl chr18:39,297,351...39,325,640
JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,029,646...9,034,160
Ensembl chr17:9,029,646...9,034,176
JBrowse link
G Trappc1 trafficking protein particle complex subunit 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,045,598...54,047,184
Ensembl chr10:54,045,537...54,047,331
JBrowse link
G Trappc11 trafficking protein particle complex subunit 11 involved_in ISO (PMID:21525244) RGD PMID:21525244 NCBI chr16:44,733,169...44,779,324
Ensembl chr16:44,733,169...44,779,322
JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 involved_in ISO (PMID:21525244) RGD PMID:21525244 NCBI chr 6:45,321,496...45,386,967
Ensembl chr 6:45,321,497...45,386,952
JBrowse link
G Trappc2 trafficking protein particle complex subunit 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:28,004,051...28,015,336
Ensembl chr  X:27,994,054...28,015,346
JBrowse link
G Trappc2b trafficking protein particle complex 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:35,938,225...35,942,869
Ensembl chr10:35,938,039...35,942,975
JBrowse link
G Trappc2l trafficking protein particle complex subunit 2L involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:50,662,507...50,666,193
Ensembl chr19:50,662,507...50,666,192
JBrowse link
G Trappc3 trafficking protein particle complex subunit 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3529210|PMID:15728249)
RGD PMID:15728249 PMID:21873635 MGI:3529210, RGD:13792537 NCBI chr 5:138,559,238...138,572,825
Ensembl chr 5:138,557,754...138,572,819
JBrowse link
G Trappc3l trafficking protein particle complex subunit 3L involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:25,992,835...26,084,938
Ensembl chr20:25,967,502...26,078,989
JBrowse link
G Trappc4 trafficking protein particle complex subunit 4 involved_in IEA
IBA
ISS
ISO
GO_REF:0000104
PMID:21873635
GO_REF:0000024
(PMID:31794024)
UniProt
RGD
PMID:31794024 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 8:44,729,458...44,733,285
Ensembl chr 8:44,725,331...44,733,491
JBrowse link
G Trappc5 trafficking protein particle complex subunit 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:1,737,666...1,741,312
Ensembl chr12:1,737,627...1,742,637
JBrowse link
G Trappc6a trafficking protein particle complex subunit 6A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:79,158,587...79,165,502
Ensembl chr 1:79,158,529...79,165,493
JBrowse link
G Trappc6b trafficking protein particle complex subunit 6B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:76,740,898...76,752,035
Ensembl chr 6:76,740,898...76,752,024
JBrowse link
G Trappc8 trafficking protein particle complex subunit 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:12,103,874...12,180,422
Ensembl chr18:12,103,877...12,180,107
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781
JBrowse link
G Uso1 USO1 vesicle transport factor involved_in IMP
IBA
PMID:10679020
PMID:21873635
UniProt
GO_Central
PMID:10679020 PMID:21873635 RGD:10400863, RGD:13792537 NCBI chr14:15,866,638...15,932,185
Ensembl chr14:15,866,638...15,932,171
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 NOT|involved_in ISO (PMID:23677696) RGD PMID:23677696 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 involved_in IDA PMID:16495485 RGD
UniProt
PMID:16735505 PMID:16495485 RGD:4892613, RGD:4892615 NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 3:162,536,090...162,578,738
Ensembl chr 3:162,535,905...162,573,763
JBrowse link
G Vcp valosin-containing protein IMP RGD PMID:7806566 RGD:730179 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A IDA RGD PMID:16735505 RGD:4892613 NCBI chr 1:254,356,343...254,661,854
Ensembl chr 1:254,356,429...254,661,852
JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules involved_in ISO
IBA
(PMID:18614018)
(MGI:5582169|PMID:18614018)
PMID:21873635
RGD PMID:18614018 PMID:21873635 MGI:5582169, RGD:13792537 NCBI chr 1:135,526,363...135,557,091
Ensembl chr 1:135,526,386...135,554,759
JBrowse link
G Yif1a Yip1 interacting factor homolog A, membrane trafficking protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,394,923...202,399,125
Ensembl chr 1:202,394,897...202,399,427
JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:6393020|PMID:26077767), (MGI:6718237|PMID:33103737)
GO_REF:0000002
PMID:21873635
UniProt
RGD
InterPro
PMID:26077767 PMID:33103737 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:6393020 MGI:6718237, RGD:13792537 NCBI chr 1:84,539,673...84,549,906
Ensembl chr 1:84,539,722...84,549,904
JBrowse link
G Yipf4 Yip1 domain family, member 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:20,950,774...20,962,195
Ensembl chr 6:20,950,501...20,962,229
JBrowse link
G Yipf5 Yip1 domain family, member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:32,123,814...32,159,752
Ensembl chr18:32,123,842...32,157,642
JBrowse link
G Yipf7 Yip1 domain family, member 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:38,571,045...38,599,070
Ensembl chr14:38,571,066...38,599,055
JBrowse link
G Ykt6 YKT6 v-SNARE homolog involved_in ISO
ISS
(PMID:9211930) RGD PMID:9211930 PMID:9211930 RGD:8553660 NCBI chr14:80,832,187...80,843,394
Ensembl chr14:80,832,187...80,843,385
JBrowse link
G Zw10 zw10 kinetochore protein involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:15029241)
HGNC-UCL
RGD
PMID:15029241 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:49,396,541...49,424,743
Ensembl chr 8:49,396,545...49,421,805
JBrowse link
COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in ISO
IEA
ISS
(PMID:22358839)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22358839 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Klhl12 kelch-like family member 12 involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:22358839), (PMID:27716508)
PMID:21873635
Ensembl
UniProt
RGD
PMID:22358839 PMID:27716508 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
JBrowse link
G Pdcd6 programmed cell death 6 involved_in ISO
ISS
(PMID:27716508)
GO_REF:0000024
RGD
UniProt
PMID:27716508 GO_REF:0000024 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
JBrowse link
G Pef1 penta-EF hand domain containing 1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:27716508)
UniProt
RGD
PMID:27716508 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
JBrowse link
G Preb prolactin regulatory element binding involved_in IDA PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590
JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273
JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:69,665,757...69,727,199
Ensembl chr13:69,684,291...69,727,196
JBrowse link
G Tfg trafficking from ER to golgi regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:43,885,542...43,911,976
Ensembl chr11:43,885,661...43,911,976
JBrowse link
COPII-coated vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07041481.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:18713837) RGD PMID:18713837 NCBI chr 3:162,536,090...162,578,738
Ensembl chr 3:162,535,905...162,573,763
JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046 PMID:18843296 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935
JBrowse link
G Scap SREBF chaperone involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:110,306,031...110,360,677
Ensembl chr 8:110,306,031...110,360,666
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046 PMID:18843296 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component involved_in IBA
ISO
PMID:21873635
UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
RGD PMID:8898360 PMID:17499046 PMID:18843296 PMID:21873635 RGD:13792537 NCBI chr 6:76,658,793...76,706,125
Ensembl chr 6:76,658,427...76,706,035
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:131,939,011...131,981,489
Ensembl chr 3:131,939,337...131,981,489
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component involved_in IBA
ISO
PMID:21873635
(PMID:17499046), (PMID:18843296)
RGD PMID:17499046 PMID:18843296 PMID:21873635 RGD:13792537 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component involved_in ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046 PMID:18843296 PMID:21873635 RGD:13792537 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component involved_in IBA
ISO
PMID:21873635
(PMID:17499046), (PMID:18843296)
RGD PMID:17499046 PMID:18843296 PMID:21873635 RGD:13792537 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component involved_in ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046 PMID:18843296 PMID:21873635 RGD:13792537 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component involved_in ISO
IEA
IBA
(PMID:17499046), (PMID:18843296)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:17499046 PMID:18843296 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 involved_in ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:5496780 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935
JBrowse link
positive regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IMP PMID:14734546 UniProt PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360) RGD PMID:17855360 NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
G Stx18 syntaxin 18 involved_in ISO (PMID:10788491), (PMID:19401338) RGD PMID:10788491 PMID:19401338 NCBI chr14:72,670,683...72,761,423
Ensembl chr14:72,670,411...72,761,464
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:4438817 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440619|MGI:4440621 (MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:4438817 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS
(PMID:24618899)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645
JBrowse link
G Preb prolactin regulatory element binding involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590
JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,024,443...36,054,067
Ensembl chr10:36,024,382...36,054,066
JBrowse link
regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas1 growth arrest-specific 1 involved_in ISO (PMID:21357679) RGD PMID:21357679 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:5608715|PMID:25201882) RGD PMID:25201882 MGI:5608715 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO
IBA
(PMID:16571679)
PMID:21873635
RGD PMID:16571679 PMID:21873635 RGD:13792537 NCBI chr 4:11,319,416...11,355,773
Ensembl chr 4:11,320,955...11,355,736
JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:19706601) RGD PMID:19706601 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009
JBrowse link
G Scfd1 sec1 family domain containing 1 IMP RGD PMID:14565970 RGD:2312425 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (MGI:3842069|PMID:19188447) RGD PMID:19188447 MGI:3842069 NCBI chr16:18,038,284...18,041,826
Ensembl chr16:18,039,173...18,041,826
JBrowse link
G Yipf5 Yip1 domain family, member 5 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3574628|PMID:11489904)
PMID:21873635
RGD PMID:11489904 PMID:21873635 MGI:3574628, RGD:13792537 NCBI chr18:32,123,814...32,159,752
Ensembl chr18:32,123,842...32,157,642
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19391
    localization 6438
      cellular localization 2962
        intracellular transport 1515
          endoplasmic reticulum to Golgi vesicle-mediated transport 128
            COPII vesicle uncoating + 0
            COPII-coated vesicle budding + 28
            endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with Golgi cis cisterna membrane 0
            endoplasmic reticulum-derived vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane 0
            positive regulation of ER to Golgi vesicle-mediated transport 5
            regulation of ER to Golgi vesicle-mediated transport + 15
            vesicle targeting, rough ER to cis-Golgi + 10
Path 2
Term Annotations click to browse term
  biological_process 19391
    localization 6438
      establishment of localization 4853
        transport 4689
          vesicle-mediated transport 1667
            Golgi vesicle transport 285
              endoplasmic reticulum to Golgi vesicle-mediated transport 128
                COPII vesicle uncoating + 0
                COPII-coated vesicle budding + 28
                endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with Golgi cis cisterna membrane 0
                endoplasmic reticulum-derived vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane 0
                positive regulation of ER to Golgi vesicle-mediated transport 5
                regulation of ER to Golgi vesicle-mediated transport + 15
                vesicle targeting, rough ER to cis-Golgi + 10
paths to the root