Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:serotonin transport
go back to main search page
Accession:GO:0006837 term browser browse the term
Definition:The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.



show annotations for term's descendants           Sort by:
 
serotonin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a3 solute carrier family 22 (organic cation transporter), member 3 involved_in IMP (MGI:3805626|PMID:18513366) ARUK-UCL PMID:18513366 MGI:3805626 NCBI chr17:12,638,859...12,726,591
Ensembl chr17:12,637,847...12,726,591
JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in IMP
ISO
(MGI:4820706|PMID:19308295) UniProt
MGI
RGD
PMID:15994310 PMID:19308295 GO_REF:0000096 MGI:4417868 MGI:4820706 RGD:1580635 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166
JBrowse link
negative regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300A molecule acts_upstream_of_or_within IDA (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr11:114,780,006...114,792,772
Ensembl chr11:114,780,867...114,795,480
JBrowse link
G Cnr1 cannabinoid receptor 1 (brain) involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:33,923,171...33,948,831
Ensembl chr 4:33,924,593...33,948,831
JBrowse link
G Hrh3 histamine receptor H3 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:15470136 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:1626430 NCBI chr 2:179,741,258...179,746,293
Ensembl chr 2:179,741,258...179,746,281
JBrowse link
G Htr1b 5-hydroxytryptamine (serotonin) receptor 1B involved_in IMP (MGI:1098377|PMID:9349547) UniProt PMID:9349547 MGI:1098377 NCBI chr 9:81,510,344...81,515,885
Ensembl chr 9:81,510,344...81,515,881
JBrowse link
G Htr7 5-hydroxytryptamine (serotonin) receptor 7 ISO RGD PMID:15260125 RGD:6480684 NCBI chr19:35,935,815...36,035,533
Ensembl chr19:35,936,134...36,034,907
JBrowse link
G Maob monoamine oxidase B involved_in ISO RGD
MGI
PMID:12175458 GO_REF:0000096 MGI:4417868 RGD:2316765 NCBI chr  X:16,575,520...16,683,605
Ensembl chr  X:16,575,521...16,683,605
JBrowse link
negative regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpm6b glycoprotein m6b involved_in IDA
IBA
(MGI:5426133|PMID:18581270)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:18581270 PMID:21873635 MGI:5426133 MGI:6201960 NCBI chr  X:165,021,775...165,172,029
Ensembl chr  X:165,021,907...165,171,984
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal involved_in IDA (MGI:3710710|PMID:17452640) UniProt PMID:17452640 MGI:3710710 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Slc18a1 solute carrier family 18 (vesicular monoamine), member 1 involved_in ISO G-protein mediated uptake inhibition RGD
MGI
PMID:16926160 GO_REF:0000096 MGI:4417868 RGD:5130998 NCBI chr 8:69,490,360...69,547,951
Ensembl chr 8:69,490,363...69,541,887
JBrowse link
G Snca synuclein, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:60,708,557...60,806,839
Ensembl chr 6:60,708,559...60,806,839
JBrowse link
positive regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 involved_in ISO RGD
MGI
PMID:20655906 GO_REF:0000096 MGI:4417868 RGD:5130946 NCBI chr 6:55,067,033...55,110,001
Ensembl chr 6:55,067,034...55,110,001
JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 involved_in ISO RGD
MGI
PMID:8347574 GO_REF:0000096 MGI:4417868 RGD:9685207 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617
JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in ISO RGD
MGI
PMID:25261262 GO_REF:0000096 MGI:4417868 RGD:11532763 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166
JBrowse link
regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone involved_in ISO RGD
MGI
PMID:21947356 GO_REF:0000096 MGI:4417868 RGD:5507821 NCBI chr 3:19,747,565...19,749,560
Ensembl chr 3:19,747,565...19,749,560
JBrowse link
G Htr1a 5-hydroxytryptamine (serotonin) receptor 1A involved_in IMP (MGI:1314969|PMID:9826725) UniProt PMID:9826725 MGI:1314969 NCBI chr13:105,580,201...105,584,641
Ensembl chr13:105,580,147...105,584,630
JBrowse link
regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fev FEV transcription factor, ETS family member involved_in NAS (MGI:5816438|PMID:25642596) ParkinsonsUK-UCL PMID:25642596 MGI:5816438 NCBI chr 1:74,920,660...74,924,632
Ensembl chr 1:74,920,668...74,924,578
JBrowse link
G Itgb3 integrin beta 3 involved_in IMP (MGI:6101340|PMID:29038237) UniProt PMID:29038237 MGI:6101340 NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302
JBrowse link
serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300A molecule acts_upstream_of IDA (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr11:114,780,006...114,792,772
Ensembl chr11:114,780,867...114,795,480
JBrowse link
G Fcer1a Fc receptor, IgE, high affinity I, alpha polypeptide acts_upstream_of_or_within IMP
IDA
(MGI:86632|PMID:8252632)
(MGI:85068|PMID:9000133)
MGI PMID:8252632 PMID:9000133 MGI:85068 MGI:86632 NCBI chr 1:173,048,836...173,054,799
Ensembl chr 1:173,048,851...173,054,781
JBrowse link
G Fcgr3 Fc receptor, IgG, low affinity III acts_upstream_of_or_within IDA (MGI:78617|PMID:8552190) MGI PMID:8552190 MGI:78617 NCBI chr 1:170,878,738...170,893,476
Ensembl chr 1:170,878,743...170,892,504
JBrowse link
G Igh-7 immunoglobulin heavy chain 7 (heavy chain of IgE) acts_upstream_of_or_within IDA (MGI:78617|PMID:8552190), (MGI:85068|PMID:9000133) MGI PMID:8552190 PMID:9000133 MGI:78617 MGI:85068
G Syk spleen tyrosine kinase acts_upstream_of_or_within IMP (MGI:85068|PMID:9000133) MGI PMID:9000133 MGI:85068 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828
JBrowse link
serotonin secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300A molecule acts_upstream_of_or_within IDA (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr11:114,780,006...114,792,772
Ensembl chr11:114,780,867...114,795,480
JBrowse link
serotonin secretion by platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide involved_in IMP (MGI:87668|PMID:9171347) UniProt PMID:9171347 MGI:87668 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934
JBrowse link
G P2rx1 purinergic receptor P2X, ligand-gated ion channel, 1 acts_upstream_of_or_within IMP (MGI:2671726|PMID:12913094) MGI PMID:12913094 MGI:2671726 NCBI chr11:72,889,882...72,906,026
Ensembl chr11:72,889,929...72,906,026
JBrowse link
G Syk spleen tyrosine kinase involved_in IMP (MGI:87668|PMID:9171347) UniProt PMID:9171347 MGI:87668 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828
JBrowse link
serotonin secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xbp1 X-box binding protein 1 involved_in ISO RGD
MGI
PMID:16889758 GO_REF:0000096 MGI:4417868 RGD:2326003 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893
JBrowse link
serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc18a1 solute carrier family 18 (vesicular monoamine), member 1 involved_in ISO RGD
MGI
PMID:19008227 GO_REF:0000096 MGI:4417868 RGD:5131091 NCBI chr 8:69,490,360...69,547,951
Ensembl chr 8:69,490,363...69,541,887
JBrowse link
G Slc18a2 solute carrier family 18 (vesicular monoamine), member 2 involved_in ISO RGD
MGI
PMID:20007701 GO_REF:0000096 MGI:4417868 RGD:5130957 NCBI chr19:59,249,310...59,284,444
Ensembl chr19:59,249,328...59,284,444
JBrowse link
G Slc22a1 solute carrier family 22 (organic cation transporter), member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:12,867,761...12,894,725
Ensembl chr17:12,867,756...12,894,716
JBrowse link
G Slc22a2 solute carrier family 22 (organic cation transporter), member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:12,803,076...12,847,376
Ensembl chr17:12,803,019...12,847,375
JBrowse link
G Slc22a3 solute carrier family 22 (organic cation transporter), member 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:12,638,859...12,726,591
Ensembl chr17:12,637,847...12,726,591
JBrowse link
G Slc29a4 solute carrier family 29 (nucleoside transporters), member 4 involved_in IMP
ISO
(MGI:5484979|PMID:23255610), (MGI:6436398|PMID:20858707) ARUK-UCL
MGI
PMID:20858707 PMID:23255610 GO_REF:0000096 MGI:4834177 MGI:5484979 MGI:6436398 NCBI chr 5:142,678,124...142,708,245
Ensembl chr 5:142,678,267...142,708,245
JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in IDA
ISO
IMP
IBA
(MGI:3710710|PMID:17452640)
(MGI:2178281|PMID:9547354), (MGI:6436398|PMID:20858707)
(MGI:6201960|PMID:21873635)
UniProt
MGI
RGD
ARUK-UCL
GO_Central
PMID:9547354 PMID:12944413 PMID:17452640 PMID:20858707 PMID:21873635 GO_REF:0000096 MGI:2178281 MGI:3710710 MGI:4417868 MGI:4834177 MGI:6201960 MGI:6436398 RGD:1580638 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28749
    localization 5578
      establishment of localization 4931
        transport 4766
          ion transport 1620
            cation transport 1217
              serotonin transport 29
                serotonin secretion + 18
                serotonin uptake + 12
paths to the root