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ONTOLOGY REPORT - ANNOTATIONS

Term:serotonin transport
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Accession:GO:0006837 term browser browse the term
Definition:The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.


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serotonin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC22A3 solute carrier family 22 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:160,348,378...160,452,577
Ensembl chr 6:160,348,378...160,452,577 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15994310 GO_REF:0000107 RGD:1580635 NCBI chr17:30,194,319...30,235,697
Ensembl chr17:30,194,319...30,236,002 		JBrowse link
negative regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD300A CD300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr17:74,466,373...74,484,798
Ensembl chr17:74,466,399...74,484,794 		JBrowse link
G CNR1 cannabinoid receptor 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:88,139,864...88,167,349
Ensembl chr 6:88,139,864...88,166,347 		JBrowse link
G HRH3 histamine receptor H3 involved_in IBA
ISO		 (PMID:21873635) GO_Central
GO_Central
RGD		 PMID:15470136 PMID:21873635 RGD:1626430 NCBI chr20:62,214,960...62,220,278
Ensembl chr20:62,214,960...62,220,278 		JBrowse link
G HTR1B 5-hydroxytryptamine receptor 1B involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:77,460,924...77,463,491
Ensembl chr 6:77,460,924...77,463,491 		JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:15260125 RGD:6480684 NCBI chr10:90,740,823...90,858,039
Ensembl chr10:90,740,823...90,858,039 		JBrowse link
G LILRB1 leukocyte immunoglobulin like receptor B1 involved_in IDA (PMID:11907092) UniProt
UniProt		 PMID:11907092 NCBI chr19:54,616,322...54,638,022
Ensembl chr19:54,617,158...54,638,022 		JBrowse link
G MAOB monoamine oxidase B involved_in IEA
ISO		 Ensembl
Ensembl
RGD		 PMID:12175458 GO_REF:0000107 RGD:2316765 NCBI chr  X:43,766,610...43,882,450
Ensembl chr  X:43,766,610...43,882,450 		JBrowse link
negative regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPM6B glycoprotein M6B involved_in ISS
IBA		 (PMID:21873635) UniProt
UniProt
GO_Central
GO_Central		 PMID:21873635 GO_REF:0000024 NCBI chr  X:13,770,939...13,938,638
Ensembl chr  X:13,770,939...13,938,638 		JBrowse link
G NOS1 nitric oxide synthase 1 involved_in ISS BHF-UCL
BHF-UCL		 GO_REF:0000024 NCBI chr12:117,208,142...117,361,626
Ensembl chr12:117,208,142...117,452,170 		JBrowse link
G SLC18A1 solute carrier family 18 member A1 ISO G-protein mediated uptake inhibition RGD PMID:16926160 RGD:5130998 NCBI chr 8:20,144,855...20,183,136
Ensembl chr 8:20,144,855...20,183,206 		JBrowse link
G SNCA synuclein alpha involved_in IDA (PMID:16882008) UniProt
UniProt		 PMID:16882008 NCBI chr 4:89,724,099...89,838,304
Ensembl chr 4:89,700,345...89,838,315 		JBrowse link
positive regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:20655906 RGD:5130946 NCBI chr 7:30,651,942...30,700,103
Ensembl chr 7:30,651,942...30,700,129 		JBrowse link
G LGALS3 galectin 3 ISO RGD PMID:8347574 RGD:9685207 NCBI chr14:55,129,252...55,145,430
Ensembl chr14:55,124,110...55,145,423 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IEA
ISO		 Ensembl
Ensembl
RGD		 PMID:25261262 GO_REF:0000107 RGD:11532763 NCBI chr17:30,194,319...30,235,697
Ensembl chr17:30,194,319...30,236,002 		JBrowse link
regulation of serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone ISO RGD PMID:21947356 RGD:5507821 NCBI chr 8:66,176,376...66,178,464
Ensembl chr 8:66,176,376...66,178,464 		JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:63,957,874...63,962,445
Ensembl chr 5:63,957,874...63,962,507 		JBrowse link
regulation of serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGB3 integrin subunit beta 3 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,827...47,313,743 		JBrowse link
serotonin secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD300A CD300a molecule acts_upstream_of ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr17:74,466,373...74,484,798
Ensembl chr17:74,466,399...74,484,794 		JBrowse link
G FCER1A Fc epsilon receptor Ia acts_upstream_of_or_within ISO (MGI:85068|PMID:9000133)
(MGI:86632|PMID:8252632)		 MGI PMID:8252632 PMID:9000133 MGI:85068 MGI:86632 NCBI chr 1:159,283,575...159,308,202
Ensembl chr 1:159,289,714...159,308,224 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:85068|PMID:9000133) MGI
Ensembl		 PMID:9000133 GO_REF:0000107 MGI:85068 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549 		JBrowse link
serotonin secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD300A CD300a molecule acts_upstream_of_or_within ISO (MGI:3721168|PMID:12874256) MGI PMID:12874256 MGI:3721168 NCBI chr17:74,466,373...74,484,798
Ensembl chr17:74,466,399...74,484,794 		JBrowse link
serotonin secretion by platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCER1G Fc epsilon receptor Ig involved_in ISO (MGI:87668|PMID:9171347) UniProt PMID:9171347 MGI:87668 NCBI chr 1:161,215,295...161,219,245
Ensembl chr 1:161,215,234...161,220,699 		JBrowse link
G P2RX1 purinergic receptor P2X 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2671726|PMID:12913094) Ensembl
Ensembl
MGI		 PMID:12913094 GO_REF:0000107 MGI:2671726 NCBI chr17:3,896,592...3,916,465
Ensembl chr17:3,896,592...3,916,476 		JBrowse link
G SYK spleen associated tyrosine kinase involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549 		JBrowse link
serotonin secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XBP1 X-box binding protein 1 ISO RGD PMID:16889758 RGD:2326003 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597 		JBrowse link
serotonin uptake term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC18A1 solute carrier family 18 member A1 involved_in IEA
ISO		 GOC
GOC
RGD		 PMID:19008227 GO_REF:0000108 RGD:5131091 NCBI chr 8:20,144,855...20,183,136
Ensembl chr 8:20,144,855...20,183,206 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 involved_in IEA
ISO		 GOC
GOC
RGD		 PMID:20007701 GO_REF:0000108 RGD:5130957 NCBI chr10:117,241,114...117,279,430
Ensembl chr10:117,241,093...117,279,430 		JBrowse link
G SLC22A1 solute carrier family 22 member 1 involved_in IDA (PMID:24688079) ARUK-UCL
ARUK-UCL		 PMID:24688079 NCBI chr 6:160,121,815...160,158,718
Ensembl chr 6:160,121,815...160,158,718 		JBrowse link
G SLC22A2 solute carrier family 22 member 2 involved_in IDA (PMID:9687576) ARUK-UCL
ARUK-UCL		 PMID:9687576 NCBI chr 6:160,216,755...160,258,821
Ensembl chr 6:160,171,061...160,277,638 		JBrowse link
G SLC22A3 solute carrier family 22 member 3 involved_in IDA (PMID:20858707) ARUK-UCL
ARUK-UCL		 PMID:20858707 NCBI chr 6:160,348,378...160,452,577
Ensembl chr 6:160,348,378...160,452,577 		JBrowse link
G SLC29A4 solute carrier family 29 member 4 involved_in IDA
IEA
ISS		 (PMID:20858707) ARUK-UCL
Ensembl
ARUK-UCL		 PMID:20858707 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:5,282,943...5,306,912
Ensembl chr 7:5,274,369...5,306,912 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 involved_in IMP
ISS
IEA
IDA
IBA
TAS
ISO		 (PMID:7681602)
(PMID:16870614), (PMID:17506858), (PMID:8987735)
(PMID:21873635)		 CACAO
ARUK-UCL
Ensembl
UniProt
GOC
GO_Central
CACAO
Reactome
Reactome
RGD
GOC
ARUK-UCL
GO_Central
UniProt		 PMID:7681602 PMID:8987735 PMID:12944413 PMID:16870614 PMID:17506858 More... GO_REF:0000024 GO_REF:0000107 GO_REF:0000108 RGD:1580638 Reactome:R-HSA-444008 NCBI chr17:30,194,319...30,235,697
Ensembl chr17:30,194,319...30,236,002 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19656
    localization 5902
      establishment of localization 5231
        transport 5070
          ion transport 1756
            cation transport 1353
              serotonin transport 27
                serotonin secretion + 17
                serotonin uptake + 11
paths to the root